Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0009869

Physical Location & Seq

Genomic Coordinates Reverse (-)

22211586 .. 22212725

Gene Structure 1140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g20880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGCCTCCGCTCTTCTCCTGCGCCGCCAGGCACATGGCCCTCGCTCTCTTCTTCTTCCTCCTCCTTTCTCCGCAAATCTCGCTCGTCAGAGCTCAGCCCAACCCGGATCGAGCCGACCCTTACCGCTACCAGAGGTTCAGCCCGTCGATGGCCATCATCATCGTTGTACTAATCGCCGCCCTCTTCCTCATGGCCTTCTTCTCAATCTACATCCGCCACTGCTCCGAAGCCAACCAACCCGGCAGCGTCCGCCCCGGAGGGACCCACACCGGCCGATCCCGACGCGGCGCAGCCTCCCGCGGCCTCGACGCCGCCGTCCTCGACACCTTCCCCACCCTCGACTACGCCGAAATCAAAGGGCTTAAAATCGGGAAAGAGGCGCTCGAGTGCGCCGTCTGCTTAAACGAATTCGAGGACGACGAAACGCTGCGTTTGATCCCTAAATGCGACCACGTGTTTCACCCAGAGTGCATCGACGAGTGGCTGGCGTCGCACACCACTTGTCCCGTTTGCCGGGCCAACCTCGTTCCTCAGCCCGGCGACTCGGCACCACAATTCACTGAGTTGGGATCGGATCAGCAGCAGGCTGACGACGTCGAAGCTCAACACGCTGCCGTTGACACGGCGGCGGAGAGAGATGACCAGGTAATGCTAGAACAACCACAACAAGAACCTGAGCTGTTGAACGTAAACCAGACGCTAAATCGGAACCGTACACGCGGATCGAGATCGAGCAGGTTGCGTAGATTGTTCCCGCGGTCGCACTCGACCGGACACTCTCTTGTCCAACCGGGAGAAGACACTGAGCGGTTCACCTTGAGACTACCGGTTGAAGTGAGAAAACAGATCATGAATCGGAAGCTGAACCGGTCCACTAGCTTGTTGGTCTTGCCCCGAGAAGGGAGTTCGAGGCGTGGTCCTCGAACCGGCGAGAGTGGCAGTACTAATAGAGTGAGGAGCTACAGAAGGCTCGAGCCGTTGGACCGGCAATTCAAATCGGACCGGTGGGTGTTCTCCAAAACGCCGTCGTTTCTCACGAGGATGTCGAGTCTCTTGTCGCCAAAGGTTGCGGCAAGTGACGGCGAGAAACCGACCGAGCCAGGGATGTCGAGGAGTAGCTCCGCTCGGCCTCCGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0009816 GO:0009987 GO:0009991 GO:0010033 GO:0010200 GO:0010243 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

380

Amino Acids

42.41

Weight (kDa)

9.08

Isoelectric Point (pI)

57.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	129 - 172	2.6e-14	Ring finger domain
zf-RING_11	PF17123	129 - 158	8.1e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	129 - 171	1.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_5	PF14634	129 - 172	1e-05	zinc-RING finger domain
zf-C3HC4	PF00097	130 - 171	1.4e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	131 - 172	5.3e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05200 AT5G27420
fragaria_vesca	FvH4_6g05450
malus_domestica	MD04G1208600.v1.1 MD12G1222600.v1.1
prunus_persica	Prupe.6G329500_v2.0.a1
pyrus_communis	pycom04g18470 pycom12g20880
rosa_chinensis	RchiOBHm_Chr3g0454221
rosa_laevigata	RLG00000025475
rosa_multiflora	Rmu_sc0007628.1_g000006 Rmu_sc0026184.1_g000001 Rmu_sc0026185.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437000 Rroxscaffold_6G00425360
rosa_rugosa	Rorug02G0653500
rosa_samantha	Rh3AG056800 Rh3BG058200 Rh3CG057400 Rh3DG058700
rosa_wichuraiana	Rw3G004370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	1 cut(s)	597
Acc36I	ACCTGC	1 cut(s)	726
AccB1I	GGYRCC	1 cut(s)	547
AccBSI	CCGCTC	3 cut(s)	10, 808, 1124
AccII	CGCG	4 cut(s)	285, 300, 720, 757
AclWI	GGATC	6 cut(s)	114, 270, 430, 577, 582, 730
AcoI	YGGCCR	2 cut(s)	150, 271
AcsI	RAATTY	1 cut(s)	407
AcvI	CACGTG	1 cut(s)	454
AcyI	GRCGYC	3 cut(s)	309, 488, 594
AfaI	GTAC	3 cut(s)	168, 715, 943
AfiI	CCNNNNNNNGG	7 cut(s)	148, 513, 536, 899, 900, 926, 1101
AflIII	ACRYGT	1 cut(s)	453
AgeI	ACCGGT	3 cut(s)	826, 867, 1002
AgsI	TTSAA	3 cut(s)	685, 833, 994
AjnI	CCWGG	3 cut(s)	26, 642, 1099
AluBI	AGCT	7 cut(s)	92, 602, 679, 862, 879, 960, 1119
AluI	AGCT	7 cut(s)	92, 602, 679, 862, 879, 960, 1119
Alw21I	GWGCWC	1 cut(s)	94
Alw26I	GTCTC	2 cut(s)	814, 1055
AlwI	GGATC	6 cut(s)	114, 270, 430, 577, 582, 730
Ama87I	CYCGRG	3 cut(s)	383, 894, 971
AoxI	GGCC	7 cut(s)	36, 150, 192, 271, 301, 516, 1127
ApeKI	GCWGC	5 cut(s)	243, 290, 427, 580, 611
ApoI	RAATTY	1 cut(s)	407
AsiGI	ACCGGT	3 cut(s)	826, 867, 1002
AspLEI	GCGC	4 cut(s)	23, 290, 382, 392
AspS9I	GGNCC	7 cut(s)	37, 261, 516, 870, 917, 982, 1000
AsuC2I	CCSGG	6 cut(s)	104, 240, 255, 515, 537, 792
AsuHPI	GGTGA	2 cut(s)	452, 805
AvaI	CYCGRG	3 cut(s)	383, 894, 971
AvaII	GGWCC	5 cut(s)	261, 870, 917, 982, 1000
BalI	TGGCCA	1 cut(s)	152
BanI	GGYRCC	1 cut(s)	547
BanII	GRGCYC	1 cut(s)	94
BauI	CACGAG	1 cut(s)	1036
BbrPI	CACGTG	1 cut(s)	454
BbsI	GAAGAC	1 cut(s)	804
Bbv12I	GWGCWC	1 cut(s)	94
BbvCI	CCTCAGC	1 cut(s)	531
BbvI	GCAGC	5 cut(s)	255, 302, 414, 592, 598
BccI	CCATC	2 cut(s)	142, 161
BceAI	ACGGC	7 cut(s)	299, 377, 599, 639, 961, 1009, 1096
BcgI	CGANNNNNNTGC	2 cut(s)	721, 755
BciT130I	CCWGG	3 cut(s)	28, 644, 1101
BcnI	CCSGG	6 cut(s)	104, 240, 255, 515, 537, 792
BcoDI	GTCTC	2 cut(s)	814, 1055
BfaI	CTAG	2 cut(s)	653, 876
BfmI	CTRYAG	1 cut(s)	961
BfoI	RGCGCY	1 cut(s)	383
BfuAI	ACCTGC	1 cut(s)	726
BlpI	GCTNAGC	1 cut(s)	93
BmcAI	AGTACT	1 cut(s)	943
Bme1390I	CCNGG	9 cut(s)	28, 104, 240, 255, 515, 537, 644, 792, 1101
Bme18I	GGWCC	5 cut(s)	261, 870, 917, 982, 1000
BmeT110I	CYCGRG	3 cut(s)	383, 894, 971
BmgT120I	GGNCC	7 cut(s)	37, 261, 516, 870, 917, 982, 1000
BmiI	GGNNCC	4 cut(s)	262, 263, 549, 710
BmrFI	CCNGG	9 cut(s)	28, 104, 240, 255, 515, 537, 644, 792, 1101
BmsI	GCATC	1 cut(s)	480
BpiI	GAAGAC	1 cut(s)	804
Bpu10I	CCTNAGC	2 cut(s)	531, 675
Bpu1102I	GCTNAGC	1 cut(s)	93
BpuEI	CTTGAG	1 cut(s)	838
BpuMI	CCSGG	6 cut(s)	104, 240, 255, 515, 537, 792
BsaAI	YACGTR	1 cut(s)	454
BsaBI	GATNNNNATC	2 cut(s)	152, 727
BsaHI	GRCGYC	3 cut(s)	309, 488, 594
BsaJI	CCNNGG	4 cut(s)	253, 298, 755, 1100
BsaWI	WCCGGW	5 cut(s)	770, 826, 867, 1002, 1132
Bsc4I	CCNNNNNNNGG	7 cut(s)	148, 513, 536, 899, 900, 926, 1101
Bse118I	RCCGGY	6 cut(s)	269, 826, 867, 926, 984, 1002
Bse8I	GATNNNNATC	2 cut(s)	152, 727
BseBI	CCWGG	3 cut(s)	28, 644, 1101
BseDI	CCNNGG	4 cut(s)	253, 298, 755, 1100
BseGI	GGATG	3 cut(s)	210, 1047, 1110
BseJI	GATNNNNATC	2 cut(s)	152, 727
BseLI	CCNNNNNNNGG	7 cut(s)	148, 513, 536, 899, 900, 926, 1101
BseMII	CTCAG	5 cut(s)	107, 545, 552, 666, 795
BseRI	GAGGAG	3 cut(s)	50, 970, 1126
BseX3I	CGGCCG	1 cut(s)	271
BseXI	GCAGC	5 cut(s)	255, 302, 414, 592, 598
Bsh1236I	CGCG	4 cut(s)	285, 300, 720, 757
Bsh1285I	CGRYCG	4 cut(s)	274, 761, 771, 1095
BshFI	GGCC	7 cut(s)	38, 152, 194, 273, 303, 518, 1129
BshNI	GGYRCC	1 cut(s)	547
BshTI	ACCGGT	3 cut(s)	826, 867, 1002
BsiEI	CGRYCG	4 cut(s)	274, 761, 771, 1095
BsiHKAI	GWGCWC	1 cut(s)	94
BsiHKCI	CYCGRG	3 cut(s)	383, 894, 971
BslFI	GGGAC	2 cut(s)	274, 489
BslI	CCNNNNNNNGG	7 cut(s)	148, 513, 536, 899, 900, 926, 1101
BsmAI	GTCTC	2 cut(s)	814, 1055
BsmFI	GGGAC	2 cut(s)	274, 489
BsnI	GGCC	7 cut(s)	38, 152, 194, 273, 303, 518, 1129
BsoBI	CYCGRG	3 cut(s)	383, 894, 971
Bsp1286I	GDGCHC	1 cut(s)	94
Bsp143I	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
Bsp1720I	GCTNAGC	1 cut(s)	93
BspANI	GGCC	7 cut(s)	38, 152, 194, 273, 303, 518, 1129
BspCNI	CTCAG	5 cut(s)	106, 544, 553, 667, 796
BspFNI	CGCG	4 cut(s)	285, 300, 720, 757
BspHI	TCATGA	1 cut(s)	849
BspLI	GGNNCC	4 cut(s)	262, 263, 549, 710
BspMI	ACCTGC	1 cut(s)	726
BspPI	GGATC	6 cut(s)	114, 270, 430, 577, 582, 730
BspQI	GCTCTTC	1 cut(s)	17
BspT107I	GGYRCC	1 cut(s)	547
BsrBI	CCGCTC	3 cut(s)	10, 808, 1124
BsrFI	RCCGGY	6 cut(s)	269, 826, 867, 926, 984, 1002
BssAI	RCCGGY	6 cut(s)	269, 826, 867, 926, 984, 1002
BssECI	CCNNGG	4 cut(s)	253, 298, 755, 1100
BssMI	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
BssNI	GRCGYC	3 cut(s)	309, 488, 594
BssSI	CACGAG	1 cut(s)	1036
Bst2BI	CACGAG	1 cut(s)	1036
Bst2UI	CCWGG	3 cut(s)	28, 644, 1101
Bst4CI	ACNGT	1 cut(s)	713
Bst6I	CTCTTC	3 cut(s)	17, 53, 188
BstACI	GRCGYC	3 cut(s)	309, 488, 594
BstBAI	YACGTR	1 cut(s)	454
BstC8I	GCNNGC	2 cut(s)	486, 585
BstDEI	CTNAG	5 cut(s)	93, 531, 561, 675, 804
BstDSI	CCRYGG	2 cut(s)	298, 755
BstF5I	GGATG	3 cut(s)	210, 1047, 1110
BstFNI	CGCG	4 cut(s)	285, 300, 720, 757
BstH2I	RGCGCY	1 cut(s)	383
BstHHI	GCGC	4 cut(s)	23, 290, 382, 392
BstKTI	GATC	8 cut(s)	109, 278, 438, 572, 577, 725, 731, 849
BstMAI	GTCTC	2 cut(s)	814, 1055
BstMBI	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
BstMCI	CGRYCG	4 cut(s)	274, 761, 771, 1095
BstMWI	GCNNNNNNNGC	6 cut(s)	79, 249, 396, 490, 608, 936
BstNI	CCWGG	3 cut(s)	28, 644, 1101
BstSCI	CCNGG	9 cut(s)	26, 102, 238, 253, 513, 535, 642, 790, 1099
BstSFI	CTRYAG	1 cut(s)	961
BstUI	CGCG	4 cut(s)	285, 300, 720, 757
BstV1I	GCAGC	5 cut(s)	255, 302, 414, 592, 598
BstV2I	GAAGAC	1 cut(s)	804
BstXI	CCANNNNNNTGG	1 cut(s)	34
BstZI	CGGCCG	1 cut(s)	271
BsuRI	GGCC	7 cut(s)	38, 152, 194, 273, 303, 518, 1129
BtgI	CCRYGG	2 cut(s)	298, 755
BtsCI	GGATG	3 cut(s)	210, 1047, 1110
BtsI	GCAGTG	1 cut(s)	217
BtsIMutI	CAGTG	3 cut(s)	217, 558, 801
BveI	ACCTGC	1 cut(s)	726
Cac8I	GCNNGC	2 cut(s)	486, 585
CciI	TCATGA	1 cut(s)	849
CfoI	GCGC	4 cut(s)	23, 290, 382, 392
Cfr10I	RCCGGY	6 cut(s)	269, 826, 867, 926, 984, 1002
Cfr13I	GGNCC	7 cut(s)	37, 261, 516, 870, 917, 982, 1000
Cfr42I	CCGCGG	2 cut(s)	301, 758
CpoI	CGGWCCG	1 cut(s)	1000
CseI	GACGC	5 cut(s)	235, 291, 317, 477, 706
CsiI	ACCWGGT	1 cut(s)	642
Csp6I	GTAC	3 cut(s)	167, 714, 942
CspAI	ACCGGT	3 cut(s)	826, 867, 1002
CspI	CGGWCCG	1 cut(s)	1000
CviAII	CATG	3 cut(s)	34, 190, 850
CviQI	GTAC	3 cut(s)	167, 714, 942
DdeI	CTNAG	5 cut(s)	93, 531, 561, 675, 804
DpnI	GATC	8 cut(s)	108, 277, 437, 571, 576, 724, 730, 848
DpnII	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	2 cut(s)	150, 271
EagI	CGGCCG	1 cut(s)	271
Eam1104I	CTCTTC	3 cut(s)	17, 53, 188
EarI	CTCTTC	3 cut(s)	17, 53, 188
EciI	GGCGGA	3 cut(s)	203, 239, 644
Ecl136II	GAGCTC	1 cut(s)	92
EclXI	CGGCCG	1 cut(s)	271
Eco24I	GRGCYC	1 cut(s)	94
Eco47I	GGWCC	5 cut(s)	261, 870, 917, 982, 1000
Eco52I	CGGCCG	1 cut(s)	271
Eco53kI	GAGCTC	1 cut(s)	92
Eco72I	CACGTG	1 cut(s)	454
Eco88I	CYCGRG	3 cut(s)	383, 894, 971
EcoICRI	GAGCTC	1 cut(s)	92
EcoO109I	RGGNCCY	1 cut(s)	261
EcoRI	GAATTC	1 cut(s)	407
EcoRII	CCWGG	3 cut(s)	26, 642, 1099
EcoT38I	GRGCYC	1 cut(s)	94
FaeI	CATG	3 cut(s)	37, 193, 853
FaiI	YATR	3 cut(s)	35, 191, 851
FaqI	GGGAC	2 cut(s)	274, 489
FatI	CATG	3 cut(s)	33, 189, 849
FauI	CCCGC	2 cut(s)	305, 762
FokI	GGATG	3 cut(s)	197, 1054, 1117
FriOI	GRGCYC	1 cut(s)	94
FspBI	CTAG	2 cut(s)	653, 876
GlaI	GCGC	4 cut(s)	22, 289, 381, 391
HaeII	RGCGCY	1 cut(s)	383
HaeIII	GGCC	7 cut(s)	38, 152, 194, 273, 303, 518, 1129
HgaI	GACGC	5 cut(s)	235, 291, 317, 477, 706
HhaI	GCGC	4 cut(s)	23, 290, 382, 392
Hin1I	GRCGYC	3 cut(s)	309, 488, 594
Hin1II	CATG	3 cut(s)	37, 193, 853
Hin6I	GCGC	4 cut(s)	21, 288, 380, 390
HinP1I	GCGC	4 cut(s)	21, 288, 380, 390
HincII	GTYRAC	1 cut(s)	619
HindII	GTYRAC	1 cut(s)	619
HinfI	GANTC	3 cut(s)	542, 853, 1048
HphI	GGTGA	2 cut(s)	452, 805
Hpy166II	GTNNAC	5 cut(s)	619, 691, 716, 813, 873
Hpy188I	TCNGA	6 cut(s)	89, 226, 574, 708, 858, 1000
Hpy188III	TCNNGA	5 cut(s)	279, 370, 726, 850, 1036
Hpy8I	GTNNAC	5 cut(s)	619, 691, 716, 813, 873
Hpy99I	CGWCG	9 cut(s)	148, 285, 311, 422, 479, 493, 596, 599, 1030
HpyAV	CCTTC	4 cut(s)	205, 337, 893, 960
HpyCH4III	ACNGT	1 cut(s)	713
HpyCH4IV	ACGT	3 cut(s)	453, 594, 687
HpyCH4V	TGCA	1 cut(s)	471
HpyF10VI	GCNNNNNNNGC	6 cut(s)	79, 249, 396, 490, 608, 936
HpyF3I	CTNAG	5 cut(s)	93, 531, 561, 675, 804
HpySE526I	ACGT	3 cut(s)	453, 594, 687
Hsp92I	GRCGYC	3 cut(s)	309, 488, 594
Hsp92II	CATG	3 cut(s)	37, 193, 853
HspAI	GCGC	4 cut(s)	21, 288, 380, 390
KflI	GGGWCCC	1 cut(s)	261
KspI	CCGCGG	2 cut(s)	301, 758
Kzo9I	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
LguI	GCTCTTC	1 cut(s)	17
LmnI	GCTCC	3 cut(s)	227, 957, 1124
Lsp1109I	GCAGC	5 cut(s)	255, 302, 414, 592, 598
LweI	GCATC	1 cut(s)	480
MabI	ACCWGGT	1 cut(s)	642
MaeI	CTAG	2 cut(s)	653, 876
MaeII	ACGT	3 cut(s)	453, 594, 687
MaeIII	GTNAC	1 cut(s)	1076
MalI	GATC	8 cut(s)	108, 277, 437, 571, 576, 724, 730, 848
MbiI	CCGCTC	3 cut(s)	10, 808, 1124
MboI	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
MboII	GAAGA	7 cut(s)	4, 40, 43, 46, 175, 190, 809
MhlI	GDGCHC	1 cut(s)	94
MlsI	TGGCCA	1 cut(s)	152
MluCI	AATT	3 cut(s)	407, 554, 989
MluNI	TGGCCA	1 cut(s)	152
MlyI	GAGTC	2 cut(s)	536, 1057
MmeI	TCCRAC	2 cut(s)	811, 960
Mox20I	TGGCCA	1 cut(s)	152
MscI	TGGCCA	1 cut(s)	152
MseI	TTAA	3 cut(s)	363, 401, 1138
MslI	CAYNNNNRTG	1 cut(s)	1040
Msp20I	TGGCCA	1 cut(s)	152
MspA1I	CMGCKG	2 cut(s)	300, 757
MspR9I	CCNGG	9 cut(s)	28, 104, 240, 255, 515, 537, 644, 792, 1101
MvaI	CCWGG	3 cut(s)	28, 644, 1101
MvnI	CGCG	4 cut(s)	285, 300, 720, 757
MwoI	GCNNNNNNNGC	6 cut(s)	79, 249, 396, 490, 608, 936
NciI	CCSGG	6 cut(s)	104, 240, 255, 515, 537, 792
NdeII	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
NlaIII	CATG	3 cut(s)	37, 193, 853
NlaIV	GGNNCC	4 cut(s)	262, 263, 549, 710
NmeAIII	GCCGAG	2 cut(s)	524, 1105
NmuCI	GTSAC	1 cut(s)	1076
PaeR7I	CTCGAG	2 cut(s)	383, 971
PagI	TCATGA	1 cut(s)	849
PciSI	GCTCTTC	1 cut(s)	17
PcsI	WCGNNNNNNNCGW	6 cut(s)	312, 345, 390, 417, 1034, 1043
PfeI	GAWTC	1 cut(s)	853
PflFI	GACNNNGTC	1 cut(s)	593
PinAI	ACCGGT	3 cut(s)	826, 867, 1002
PleI	GAGTC	2 cut(s)	536, 1056
PmaCI	CACGTG	1 cut(s)	454
PmlI	CACGTG	1 cut(s)	454
PpsI	GAGTC	2 cut(s)	536, 1056
Ppu21I	YACGTR	1 cut(s)	454
PpuMI	RGGWCCY	1 cut(s)	261
Psp124BI	GAGCTC	1 cut(s)	94
Psp5II	RGGWCCY	1 cut(s)	261
Psp6I	CCWGG	3 cut(s)	26, 642, 1099
PspCI	CACGTG	1 cut(s)	454
PspGI	CCWGG	3 cut(s)	26, 642, 1099
PspN4I	GGNNCC	4 cut(s)	262, 263, 549, 710
PspPI	GGNCC	7 cut(s)	37, 261, 516, 870, 917, 982, 1000
PspPPI	RGGWCCY	1 cut(s)	261
PspXI	VCTCGAGB	2 cut(s)	383, 971
PsyI	GACNNNGTC	1 cut(s)	593
RsaI	GTAC	3 cut(s)	168, 715, 943
RsaNI	GTAC	3 cut(s)	167, 714, 942
RseI	CAYNNNNRTG	1 cut(s)	1040
Rsr2I	CGGWCCG	1 cut(s)	1000
RsrII	CGGWCCG	1 cut(s)	1000
SacI	GAGCTC	1 cut(s)	94
SacII	CCGCGG	2 cut(s)	301, 758
SapI	GCTCTTC	1 cut(s)	17
SaqAI	TTAA	3 cut(s)	363, 401, 1138
Sau3AI	GATC	8 cut(s)	106, 275, 435, 569, 574, 722, 728, 846
Sau96I	GGNCC	7 cut(s)	37, 261, 516, 870, 917, 982, 1000
ScaI	AGTACT	1 cut(s)	943
SchI	GAGTC	2 cut(s)	536, 1057
ScrFI	CCNGG	9 cut(s)	28, 104, 240, 255, 515, 537, 644, 792, 1101
SduI	GDGCHC	1 cut(s)	94
SexAI	ACCWGGT	1 cut(s)	642
SfaNI	GCATC	1 cut(s)	480
SfcI	CTRYAG	1 cut(s)	961
Sfr274I	CTCGAG	2 cut(s)	383, 971
Sfr303I	CCGCGG	2 cut(s)	301, 758
SgrBI	CCGCGG	2 cut(s)	301, 758
SinI	GGWCC	5 cut(s)	261, 870, 917, 982, 1000
SlaI	CTCGAG	2 cut(s)	383, 971
SmiMI	CAYNNNNRTG	1 cut(s)	1040
SmlI	CTYRAG	3 cut(s)	383, 817, 971
SmoI	CTYRAG	3 cut(s)	383, 817, 971
Sse9I	AATT	3 cut(s)	407, 554, 989
SspMI	CTAG	2 cut(s)	653, 876
SstI	GAGCTC	1 cut(s)	94
StyD4I	CCNGG	9 cut(s)	26, 102, 238, 253, 513, 535, 642, 790, 1099
TaaI	ACNGT	1 cut(s)	713
TaiI	ACGT	3 cut(s)	456, 597, 690
TaqII	GACCGA	1 cut(s)	1109
TasI	AATT	3 cut(s)	407, 554, 989
TatI	WGTACW	2 cut(s)	166, 941
TauI	GCSGC	7 cut(s)	26, 179, 288, 303, 314, 629, 1073
TfiI	GAWTC	1 cut(s)	853
Tru1I	TTAA	3 cut(s)	363, 401, 1138
Tru9I	TTAA	3 cut(s)	363, 401, 1138
TscAI	CASTG	3 cut(s)	224, 565, 808
TseFI	GTSAC	1 cut(s)	1076
TseI	GCWGC	5 cut(s)	243, 290, 427, 580, 611
Tsp45I	GTSAC	1 cut(s)	1076
TspDTI	ATGAA	1 cut(s)	866
TspRI	CASTG	3 cut(s)	224, 565, 808
Tth111I	GACNNNGTC	1 cut(s)	593
VpaK11BI	GGWCC	5 cut(s)	261, 870, 917, 982, 1000
XapI	RAATTY	1 cut(s)	407
XcmI	CCANNNNNNNNNTGG	1 cut(s)	880
XhoI	CTCGAG	2 cut(s)	383, 971
XspI	CTAG	2 cut(s)	653, 876
ZraI	GACGTC	1 cut(s)	595
ZrmI	AGTACT	1 cut(s)	943

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.