Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0009869

Physical Location & Seq

Genomic Coordinates Forward (+)

3971932 .. 3973647

Gene Structure 1716 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG057400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGAATCACTCCCCTCGGTTTTTATCCCACGCCGTCAAACATGTTGCCGCTACTCTCTTCTTGATCCTACTCCTCTCACAGGAAACTCTAGCTCAGCCTACTCCCGACCAGCAGCAAGATGACCAATATCGCTACCAGAAGTTCAGCCCCTCGATGGCGGTCATCATCGTGGTCCTCGTCGCCGCTCTCTTCCTCATGGGCTTCTTCTCCATCTACATCCGCCACTGCTCCGAACCCCAGTCCGGCAGCGTCCACGCCGGCGGGGCCATCACCGGCCGCTCCAGACGCGGCGCTGCGCGTGGACTCGACTCCAGCGTCATCGACACGTTCCCGACTTTGGAGTACAAAGTCGTCAAGGGTTTGAAAATAGGTAAGGGAGCGTTGGAGTGCGCCGTGTGCTTGAACGAGTTTGAGGACGATGAGACGCTGCGTTTGATTCCCAAGTGCGATCATGTGTTTCATCCCGAGTGTATTGACGAGTGGTTGGCTTCTCATACTACGTGTCCGGTTTGCCGGGCCAATCTAGAGCCTCAGGCCGGTGACCCGGTCGTCGAACTCGGTGATCAGTTGACCGCCCATGACGACGTCGAAGCCCAACACGAGGTCGACTGTGACTCGGCACCGGACCACCACAACAGTGATGGACAGCAGGAAGAAGTGGAGCCTGAGGTAGTGAACGTGAACCAGACTTTGAATAGGAACCGCACGCGAGGAAGATCGAACCGGTTCCGCCGGTTGTTTCCCCGGTCTCACTCGACCGGGCACTCTTTGGTCCAACCGGGCGAGGACACGGAGCGGTTCACTTTGAGACTACCGGTCGAGGTGAGAAAACAGATCATCAACCGGAAGCTACACCGGTCCACTAGTGTGTTGGTGTTGCCGAGAGAAGGGAGTTCACGGCGCGGCCCCCGAATGGGGGACAGTGGTAGCAACAATAGAGTGAGGAACTATAAGCGGCTCGAGCCATTGGACCGGACATTTAAATCGGAACGGTGGGTTTTTTCGAGGGCACCATCATTTCTAACGAGGATGTTGTCCATTAAGTCACCGAAGGTGACGGCCAACGTGGGCGAGGGACCTTCGGCTCAACCCACCGAGCCGGTTTTTACGAGGAGTGGCTCGGTTCGGCCGGCAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0009816 GO:0009987 GO:0009991 GO:0010033 GO:0010200 GO:0010243 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

379

Amino Acids

42.4

Weight (kDa)

8.41

Isoelectric Point (pI)

51.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	129 - 172	2.6e-14	Ring finger domain
zf-RING_11	PF17123	129 - 158	8.1e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	129 - 171	1.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_5	PF14634	129 - 172	1e-05	zinc-RING finger domain
zf-C3HC4	PF00097	130 - 171	1.4e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	133 - 172	9.8e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05200 AT5G27420
fragaria_vesca	FvH4_6g05450
malus_domestica	MD04G1208600.v1.1 MD12G1222600.v1.1
prunus_persica	Prupe.6G329500_v2.0.a1
pyrus_communis	pycom04g18470 pycom12g20880
rosa_chinensis	RchiOBHm_Chr3g0454221
rosa_laevigata	RLG00000025475
rosa_multiflora	Rmu_sc0007628.1_g000006 Rmu_sc0026184.1_g000001 Rmu_sc0026185.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437000 Rroxscaffold_6G00425360
rosa_rugosa	Rorug02G0653500
rosa_samantha	Rh3AG056800 Rh3BG058200 Rh3CG057400 Rh3DG058700
rosa_wichuraiana	Rw3G004370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	314, 548
AatII	GACGTC	1 cut(s)	588
AccB1I	GGYRCC	2 cut(s)	619, 1009
AccBSI	CCGCTC	3 cut(s)	185, 279, 796
AccI	GTMKAC	1 cut(s)	606
AccII	CGCG	4 cut(s)	288, 298, 709, 903
AclWI	GGATC	1 cut(s)	58
AcoI	YGGCCR	3 cut(s)	274, 1059, 1127
AcyI	GRCGYC	1 cut(s)	585
AfaI	GTAC	1 cut(s)	344
AflIII	ACRYGT	3 cut(s)	40, 324, 500
AgeI	ACCGGT	3 cut(s)	723, 814, 855
AgsI	TTSAA	3 cut(s)	364, 403, 694
AhdI	GACNNNNNGTC	1 cut(s)	815
AhlI	ACTAGT	1 cut(s)	863
AleI	CACNNNNGTG	2 cut(s)	636, 866
AluBI	AGCT	2 cut(s)	92, 850
AluI	AGCT	2 cut(s)	92, 850
Alw26I	GTCTC	3 cut(s)	416, 753, 802
AlwI	GGATC	1 cut(s)	58
Ama87I	CYCGRG	2 cut(s)	464, 959
AoxI	GGCC	7 cut(s)	264, 274, 516, 534, 904, 1059, 1127
ApeKI	GCWGC	4 cut(s)	112, 246, 293, 427
ArsI	GACNNNNNNTTYG	2 cut(s)	415, 447
AsiGI	ACCGGT	3 cut(s)	723, 814, 855
Asp700I	GAANNNNTTC	1 cut(s)	725
AspLEI	GCGC	4 cut(s)	293, 298, 392, 903
AspS9I	GGNCC	9 cut(s)	172, 264, 516, 625, 772, 858, 905, 970, 1076
AsuC2I	CCSGG	5 cut(s)	515, 545, 745, 760, 780
AsuHPI	GGTGA	6 cut(s)	262, 551, 572, 835, 1038, 1066
AvaI	CYCGRG	2 cut(s)	464, 959
AvaII	GGWCC	6 cut(s)	172, 625, 772, 858, 970, 1076
AxyI	CCTNAGG	2 cut(s)	531, 666
BaeGI	GKGCMC	2 cut(s)	765, 1012
BanI	GGYRCC	2 cut(s)	619, 1009
BauI	CACGAG	1 cut(s)	599
BbvI	GCAGC	4 cut(s)	124, 258, 280, 414
BccI	CCATC	5 cut(s)	148, 218, 275, 635, 1021
BceAI	ACGGC	4 cut(s)	17, 377, 914, 1074
BclI	TGATCA	1 cut(s)	562
BcnI	CCSGG	5 cut(s)	515, 545, 745, 760, 780
BcoDI	GTCTC	3 cut(s)	416, 753, 802
BcuI	ACTAGT	1 cut(s)	863
BfaI	CTAG	3 cut(s)	89, 524, 864
BfoI	RGCGCY	1 cut(s)	294
BglI	GCCNNNNNGGC	1 cut(s)	263
BlpI	GCTNAGC	1 cut(s)	93
Bme1390I	CCNGG	5 cut(s)	515, 545, 745, 760, 780
Bme18I	GGWCC	6 cut(s)	172, 625, 772, 858, 970, 1076
BmeRI	GACNNNNNGTC	1 cut(s)	815
BmeT110I	CYCGRG	2 cut(s)	464, 959
BmgT120I	GGNCC	9 cut(s)	172, 264, 516, 625, 772, 858, 905, 970, 1076
BmiI	GGNNCC	8 cut(s)	265, 621, 663, 701, 728, 907, 1011, 1077
BmrFI	CCNGG	5 cut(s)	515, 545, 745, 760, 780
BmrI	ACTGGG	1 cut(s)	232
BmuI	ACTGGG	1 cut(s)	232
BpmI	CTGGAG	2 cut(s)	265, 295
Bpu1102I	GCTNAGC	1 cut(s)	93
BpuMI	CCSGG	5 cut(s)	515, 545, 745, 760, 780
BsaAI	YACGTR	1 cut(s)	501
BsaHI	GRCGYC	1 cut(s)	585
BsaI	GGTCTC	1 cut(s)	753
BsaJI	CCNNGG	2 cut(s)	14, 743
BsaWI	WCCGGW	7 cut(s)	505, 622, 723, 814, 843, 855, 972
Bse118I	RCCGGY	9 cut(s)	257, 272, 536, 723, 732, 814, 855, 1099, 1129
Bse1I	ACTGG	1 cut(s)	238
Bse21I	CCTNAGG	2 cut(s)	531, 666
BseDI	CCNNGG	2 cut(s)	14, 743
BseGI	GGATG	3 cut(s)	216, 460, 1035
BseMII	CTCAG	3 cut(s)	107, 545, 657
BseNI	ACTGG	1 cut(s)	238
BseRI	GAGGAG	2 cut(s)	62, 1126
BseSI	GKGCMC	2 cut(s)	765, 1012
BseX3I	CGGCCG	2 cut(s)	274, 1127
BseXI	GCAGC	4 cut(s)	124, 258, 280, 414
Bsh1236I	CGCG	4 cut(s)	288, 298, 709, 903
Bsh1285I	CGRYCG	5 cut(s)	277, 549, 759, 819, 1130
BshFI	GGCC	7 cut(s)	266, 276, 518, 536, 906, 1061, 1129
BshNI	GGYRCC	2 cut(s)	619, 1009
BshTI	ACCGGT	3 cut(s)	723, 814, 855
BsiEI	CGRYCG	5 cut(s)	277, 549, 759, 819, 1130
BsiHKCI	CYCGRG	2 cut(s)	464, 959
BslFI	GGGAC	2 cut(s)	932, 1089
BsmAI	GTCTC	3 cut(s)	416, 753, 802
BsmBI	CGTCTC	1 cut(s)	416
BsmFI	GGGAC	2 cut(s)	932, 1089
BsnI	GGCC	7 cut(s)	266, 276, 518, 536, 906, 1061, 1129
Bso31I	GGTCTC	1 cut(s)	753
BsoBI	CYCGRG	2 cut(s)	464, 959
Bsp1286I	GDGCHC	2 cut(s)	765, 1012
Bsp143I	GATC	5 cut(s)	63, 448, 562, 716, 834
Bsp1720I	GCTNAGC	1 cut(s)	93
BspANI	GGCC	7 cut(s)	266, 276, 518, 536, 906, 1061, 1129
BspCNI	CTCAG	3 cut(s)	106, 544, 658
BspFNI	CGCG	4 cut(s)	288, 298, 709, 903
BspLI	GGNNCC	8 cut(s)	265, 621, 663, 701, 728, 907, 1011, 1077
BspPI	GGATC	1 cut(s)	58
BspT107I	GGYRCC	2 cut(s)	619, 1009
BspTNI	GGTCTC	1 cut(s)	753
BsrBI	CCGCTC	3 cut(s)	185, 279, 796
BsrFI	RCCGGY	9 cut(s)	257, 272, 536, 723, 732, 814, 855, 1099, 1129
BsrI	ACTGG	1 cut(s)	238
BssAI	RCCGGY	9 cut(s)	257, 272, 536, 723, 732, 814, 855, 1099, 1129
BssECI	CCNNGG	2 cut(s)	14, 743
BssMI	GATC	5 cut(s)	63, 448, 562, 716, 834
BssNI	GRCGYC	1 cut(s)	585
BssSI	CACGAG	1 cut(s)	599
Bst2BI	CACGAG	1 cut(s)	599
Bst4CI	ACNGT	4 cut(s)	611, 638, 923, 993
Bst6I	CTCTTC	2 cut(s)	62, 194
BstACI	GRCGYC	1 cut(s)	585
BstBAI	YACGTR	1 cut(s)	501
BstC8I	GCNNGC	3 cut(s)	259, 707, 1131
BstDEI	CTNAG	3 cut(s)	93, 531, 666
BstEII	GGTNACC	1 cut(s)	539
BstENI	CCTNNNNNAGG	1 cut(s)	77
BstF5I	GGATG	3 cut(s)	216, 460, 1035
BstFNI	CGCG	4 cut(s)	288, 298, 709, 903
BstH2I	RGCGCY	1 cut(s)	294
BstHHI	GCGC	4 cut(s)	293, 298, 392, 903
BstKTI	GATC	5 cut(s)	66, 451, 565, 719, 837
BstMAI	GTCTC	3 cut(s)	416, 753, 802
BstMBI	GATC	5 cut(s)	63, 448, 562, 716, 834
BstMCI	CGRYCG	5 cut(s)	277, 549, 759, 819, 1130
BstMWI	GCNNNNNNNGC	4 cut(s)	263, 285, 396, 961
BstNSI	RCATGY	1 cut(s)	44
BstPI	GGTNACC	1 cut(s)	539
BstSCI	CCNGG	5 cut(s)	513, 543, 743, 758, 778
BstSLI	GKGCMC	2 cut(s)	765, 1012
BstUI	CGCG	4 cut(s)	288, 298, 709, 903
BstV1I	GCAGC	4 cut(s)	124, 258, 280, 414
BstZI	CGGCCG	2 cut(s)	274, 1127
Bsu36I	CCTNAGG	2 cut(s)	531, 666
BsuRI	GGCC	7 cut(s)	266, 276, 518, 536, 906, 1061, 1129
BtsCI	GGATG	3 cut(s)	216, 460, 1035
BtsI	GCAGTG	1 cut(s)	223
BtsIMutI	CAGTG	3 cut(s)	223, 643, 928
Cac8I	GCNNGC	3 cut(s)	259, 707, 1131
CfoI	GCGC	4 cut(s)	293, 298, 392, 903
Cfr10I	RCCGGY	9 cut(s)	257, 272, 536, 723, 732, 814, 855, 1099, 1129
Cfr13I	GGNCC	9 cut(s)	172, 264, 516, 625, 772, 858, 905, 970, 1076
CseI	GACGC	4 cut(s)	238, 294, 304, 433
Csp6I	GTAC	1 cut(s)	343
CspAI	ACCGGT	3 cut(s)	723, 814, 855
CviAII	CATG	4 cut(s)	41, 196, 452, 578
CviQI	GTAC	1 cut(s)	343
DdeI	CTNAG	3 cut(s)	93, 531, 666
DpnI	GATC	5 cut(s)	65, 450, 564, 718, 836
DpnII	GATC	5 cut(s)	63, 448, 562, 716, 834
DraI	TTTAAA	1 cut(s)	982
DrdI	GACNNNNNNGTC	2 cut(s)	314, 548
DriI	GACNNNNNGTC	1 cut(s)	815
DseDI	GACNNNNNNGTC	2 cut(s)	314, 548
EaeI	YGGCCR	3 cut(s)	274, 1059, 1127
EagI	CGGCCG	2 cut(s)	274, 1127
Eam1104I	CTCTTC	2 cut(s)	62, 194
Eam1105I	GACNNNNNGTC	1 cut(s)	815
EarI	CTCTTC	2 cut(s)	62, 194
EciI	GGCGGA	2 cut(s)	209, 719
EclXI	CGGCCG	2 cut(s)	274, 1127
Eco31I	GGTCTC	1 cut(s)	753
Eco47I	GGWCC	6 cut(s)	172, 625, 772, 858, 970, 1076
Eco52I	CGGCCG	2 cut(s)	274, 1127
Eco81I	CCTNAGG	2 cut(s)	531, 666
Eco88I	CYCGRG	2 cut(s)	464, 959
Eco91I	GGTNACC	1 cut(s)	539
EcoNI	CCTNNNNNAGG	1 cut(s)	77
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoO65I	GGTNACC	1 cut(s)	539
Esp3I	CGTCTC	1 cut(s)	416
FaeI	CATG	4 cut(s)	44, 199, 455, 581
FaiI	YATR	6 cut(s)	42, 197, 453, 495, 579, 951
FaqI	GGGAC	2 cut(s)	932, 1089
FatI	CATG	4 cut(s)	40, 195, 451, 577
FauI	CCCGC	1 cut(s)	254
FbaI	TGATCA	1 cut(s)	562
FblI	GTMKAC	1 cut(s)	606
FokI	GGATG	3 cut(s)	203, 447, 1042
FspBI	CTAG	3 cut(s)	89, 524, 864
GlaI	GCGC	4 cut(s)	292, 297, 391, 902
GsuI	CTGGAG	2 cut(s)	265, 295
HaeII	RGCGCY	1 cut(s)	294
HaeIII	GGCC	7 cut(s)	266, 276, 518, 536, 906, 1061, 1129
HgaI	GACGC	4 cut(s)	238, 294, 304, 433
HhaI	GCGC	4 cut(s)	293, 298, 392, 903
Hin1I	GRCGYC	1 cut(s)	585
Hin1II	CATG	4 cut(s)	44, 199, 455, 581
Hin6I	GCGC	4 cut(s)	291, 296, 390, 901
HinP1I	GCGC	4 cut(s)	291, 296, 390, 901
HincII	GTYRAC	2 cut(s)	570, 607
HindII	GTYRAC	2 cut(s)	570, 607
HinfI	GANTC	5 cut(s)	4, 303, 308, 436, 614
HphI	GGTGA	6 cut(s)	262, 551, 572, 835, 1038, 1066
Hpy166II	GTNNAC	9 cut(s)	253, 302, 570, 607, 676, 682, 801, 861, 896
Hpy188I	TCNGA	2 cut(s)	232, 988
Hpy188III	TCNNGA	6 cut(s)	61, 104, 282, 331, 464, 524
Hpy8I	GTNNAC	9 cut(s)	253, 302, 570, 607, 676, 682, 801, 861, 896
Hpy99I	CGWCG	4 cut(s)	182, 554, 587, 590
HpyAV	CCTTC	3 cut(s)	881, 1045, 1089
HpyCH4III	ACNGT	4 cut(s)	611, 638, 923, 993
HpyCH4IV	ACGT	5 cut(s)	326, 500, 585, 678, 1065
HpyF10VI	GCNNNNNNNGC	4 cut(s)	263, 285, 396, 961
HpyF3I	CTNAG	3 cut(s)	93, 531, 666
HpySE526I	ACGT	5 cut(s)	326, 500, 585, 678, 1065
Hsp92I	GRCGYC	1 cut(s)	585
Hsp92II	CATG	4 cut(s)	44, 199, 455, 581
HspAI	GCGC	4 cut(s)	291, 296, 390, 901
KroI	GCCGGC	2 cut(s)	257, 1129
KroNI	GCCGGC	2 cut(s)	259, 1131
Ksp22I	TGATCA	1 cut(s)	562
Kzo9I	GATC	5 cut(s)	63, 448, 562, 716, 834
LmnI	GCTCC	5 cut(s)	233, 284, 377, 661, 793
Lsp1109I	GCAGC	4 cut(s)	124, 258, 280, 414
MaeI	CTAG	3 cut(s)	89, 524, 864
MaeII	ACGT	5 cut(s)	326, 500, 585, 678, 1065
MaeIII	GTNAC	4 cut(s)	539, 611, 1044, 1054
MalI	GATC	5 cut(s)	65, 450, 564, 718, 836
MbiI	CCGCTC	3 cut(s)	185, 279, 796
MboI	GATC	5 cut(s)	63, 448, 562, 716, 834
MboII	GAAGA	5 cut(s)	49, 181, 196, 665, 726
MhlI	GDGCHC	2 cut(s)	765, 1012
MluCI	AATT	1 cut(s)	1134
MlyI	GAGTC	3 cut(s)	297, 302, 608
MmeI	TCCRAC	2 cut(s)	363, 799
MreI	CGCCGGCG	1 cut(s)	257
MroNI	GCCGGC	2 cut(s)	257, 1129
MroXI	GAANNNNTTC	1 cut(s)	725
MseI	TTAA	3 cut(s)	981, 1041, 1138
MslI	CAYNNNNRTG	3 cut(s)	167, 636, 866
MspR9I	CCNGG	5 cut(s)	515, 545, 745, 760, 780
MteI	GCGCNGCGC	1 cut(s)	294
MvnI	CGCG	4 cut(s)	288, 298, 709, 903
MwoI	GCNNNNNNNGC	4 cut(s)	263, 285, 396, 961
NaeI	GCCGGC	2 cut(s)	259, 1131
NciI	CCSGG	5 cut(s)	515, 545, 745, 760, 780
NdeII	GATC	5 cut(s)	63, 448, 562, 716, 834
NgoMIV	GCCGGC	2 cut(s)	257, 1129
NlaIII	CATG	4 cut(s)	44, 199, 455, 581
NlaIV	GGNNCC	8 cut(s)	265, 621, 663, 701, 728, 907, 1011, 1077
NmeAIII	GCCGAG	2 cut(s)	596, 906
NmuCI	GTSAC	4 cut(s)	539, 611, 1044, 1054
NspI	RCATGY	1 cut(s)	44
OliI	CACNNNNGTG	2 cut(s)	636, 866
PaeR7I	CTCGAG	1 cut(s)	959
PciI	ACATGT	1 cut(s)	40
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 312
PdiI	GCCGGC	2 cut(s)	259, 1131
PdmI	GAANNNNTTC	1 cut(s)	725
PfeI	GAWTC	2 cut(s)	4, 436
PflFI	GACNNNGTC	2 cut(s)	545, 584
PinAI	ACCGGT	3 cut(s)	723, 814, 855
PleI	GAGTC	3 cut(s)	297, 302, 608
PpsI	GAGTC	3 cut(s)	297, 302, 608
Ppu21I	YACGTR	1 cut(s)	501
PpuMI	RGGWCCY	1 cut(s)	1076
PscI	ACATGT	1 cut(s)	40
Psp5II	RGGWCCY	1 cut(s)	1076
PspEI	GGTNACC	1 cut(s)	539
PspN4I	GGNNCC	8 cut(s)	265, 621, 663, 701, 728, 907, 1011, 1077
PspPI	GGNCC	9 cut(s)	172, 264, 516, 625, 772, 858, 905, 970, 1076
PspPPI	RGGWCCY	1 cut(s)	1076
PspXI	VCTCGAGB	1 cut(s)	959
PsyI	GACNNNGTC	2 cut(s)	545, 584
RsaI	GTAC	1 cut(s)	344
RsaNI	GTAC	1 cut(s)	343
RseI	CAYNNNNRTG	3 cut(s)	167, 636, 866
SalI	GTCGAC	1 cut(s)	605
SaqAI	TTAA	3 cut(s)	981, 1041, 1138
Sau3AI	GATC	5 cut(s)	63, 448, 562, 716, 834
Sau96I	GGNCC	9 cut(s)	172, 264, 516, 625, 772, 858, 905, 970, 1076
SchI	GAGTC	3 cut(s)	297, 302, 608
ScrFI	CCNGG	5 cut(s)	515, 545, 745, 760, 780
SduI	GDGCHC	2 cut(s)	765, 1012
Sfr274I	CTCGAG	1 cut(s)	959
SgrAI	CRCCGGYG	1 cut(s)	257
SinI	GGWCC	6 cut(s)	172, 625, 772, 858, 970, 1076
SlaI	CTCGAG	1 cut(s)	959
SmiI	ATTTAAAT	1 cut(s)	982
SmiMI	CAYNNNNRTG	3 cut(s)	167, 636, 866
SmlI	CTYRAG	1 cut(s)	959
SmoI	CTYRAG	1 cut(s)	959
SpeI	ACTAGT	1 cut(s)	863
Sse9I	AATT	1 cut(s)	1134
SspMI	CTAG	3 cut(s)	89, 524, 864
StyD4I	CCNGG	5 cut(s)	513, 543, 743, 758, 778
SwaI	ATTTAAAT	1 cut(s)	982
TaaI	ACNGT	4 cut(s)	611, 638, 923, 993
TaiI	ACGT	5 cut(s)	329, 503, 588, 681, 1068
TasI	AATT	1 cut(s)	1134
TatI	WGTACW	1 cut(s)	342
TauI	GCSGC	6 cut(s)	50, 185, 279, 291, 906, 958
TfiI	GAWTC	2 cut(s)	4, 436
Tru1I	TTAA	3 cut(s)	981, 1041, 1138
Tru9I	TTAA	3 cut(s)	981, 1041, 1138
TscAI	CASTG	3 cut(s)	230, 643, 928
TseFI	GTSAC	4 cut(s)	539, 611, 1044, 1054
TseI	GCWGC	4 cut(s)	112, 246, 293, 427
Tsp45I	GTSAC	4 cut(s)	539, 611, 1044, 1054
TspDTI	ATGAA	2 cut(s)	17, 449
TspGWI	ACGGA	1 cut(s)	806
TspRI	CASTG	3 cut(s)	230, 643, 928
Tth111I	GACNNNGTC	2 cut(s)	545, 584
VpaK11BI	GGWCC	6 cut(s)	172, 625, 772, 858, 970, 1076
XagI	CCTNNNNNAGG	1 cut(s)	77
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	1 cut(s)	44
XcmI	CCANNNNNNNNNTGG	2 cut(s)	638, 868
XhoI	CTCGAG	1 cut(s)	959
XmiI	GTMKAC	1 cut(s)	606
XmnI	GAANNNNTTC	1 cut(s)	725
XspI	CTAG	3 cut(s)	89, 524, 864
ZraI	GACGTC	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.