Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009869

Physical Location & Seq

Genomic Coordinates Forward (+)

4358087 .. 4359429

Gene Structure 1343 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42124

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGAATCACTCCCCTCGGTTTTTATCCCACGCCGTCAAACATGTTGCCGCTACTCTCTTCTTGATCCTACTCCTCTCACCGGAAACTCTAGCTCAGCCTACTCCCGACCAGCAGCGAGATGACCCCTTTCGCTACCAGAAGTTCAGCCCCTCGATGGCGGTCATCATCGTGGTCCTCGTCGCCGCCCTCTTCCTCATGGGATTCTTCTCCATCTACATCCGCCACTGCTCCGAACCCCAGTCCGGCAGCGTCCACGCCGGCGGGGCCATCACTGGCCGCTCCAGACGAGGCGCTGCGCGTGGACTCGACTCCAGCGTCATCGACACGTTCCCGACCTTGGAGTACAAAGTCGTCAAGGGTTTGAAAATAGGTAAGGGAGCGTTGGAGTGCGCCGTGTGCTTGAACGAGTTTGAGGACGATGAGACGCTGCGTTTGATTCCCAAGTGCGATCATGTGTTTCATCCCGAGTGTATTGACGAGTGGTTGGCTTCTCATACTACGTGTCCGGTTTGCCGGGCCAATCTAGAGCCTCAGGCCGGTGACCCGGTCGTCGAACTCGGTGAGTTGAACGCCCATGACGACGTCGAAGCCCAACACGAGGTCGACTGTGACTCGGCACCGGACCACCACAACAGTGACGGACAGCAGGAAGAAGTGGAGCCTGCGGTAGTGAACGTGAACCAGACTTTGAATAGGAACCGCACGCGTGGAAGATCGAACCGGTTCCGCCGGTTGTTTCCCCGGTCTCACTCGACCGGGCACTCTTTGATCCAACCGGGCGAGGACACGGAGCGGTTCACTTTGAGACTACCGGTCGAGGTGAGAAAACAGATCATCAACCGGAAGCTACACCGGTCCACTAGTGTGTTGGTGTTGCCGAGAGAAGGGAGTTCACGGCGCGGCCCCCGAATGGGGGACAGTGGTAGCAACAATAGAGTGAGGAACTATAAGCGGCTCGAGCCATTGGACCGGACATTTAAATCGGAACGGTGGGTTTTTTCGAGGGCACCATCATTTCTAACGAGGATGTTGTCCATTAAGTCACCGAAGGTGACGGCCAACGTGGGCGAGGGACCTTCGGCTCAACCCACCGAGCCGGTTTTTACCAGGAGCAGCTCGGTTCGGCCGGCAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0009816 GO:0009987 GO:0009991 GO:0010033 GO:0010200 GO:0010243 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043412 GO:0043562 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

378

Amino Acids

42.23

Weight (kDa)

8.79

Isoelectric Point (pI)

53.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	129 - 172	2.6e-14	Ring finger domain
zf-RING_11	PF17123	129 - 158	8.1e-10	RING-like zinc finger
zf-C3HC4_2	PF13923	129 - 171	1.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_5	PF14634	129 - 172	9.9e-06	zinc-RING finger domain
zf-C3HC4	PF00097	130 - 171	1.4e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	133 - 172	9.7e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05200 AT5G27420
fragaria_vesca	FvH4_6g05450
malus_domestica	MD04G1208600.v1.1 MD12G1222600.v1.1
prunus_persica	Prupe.6G329500_v2.0.a1
pyrus_communis	pycom04g18470 pycom12g20880
rosa_chinensis	RchiOBHm_Chr3g0454221
rosa_laevigata	RLG00000025475
rosa_multiflora	Rmu_sc0007628.1_g000006 Rmu_sc0026184.1_g000001 Rmu_sc0026185.1_g000001
rosa_roxburghii	Rroxscaffold_165G00437000 Rroxscaffold_6G00425360
rosa_rugosa	Rorug02G0653500
rosa_samantha	Rh3AG056800 Rh3BG058200 Rh3CG057400 Rh3DG058700
rosa_wichuraiana	Rw3G004370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	314, 548
AatII	GACGTC	1 cut(s)	585
AccB1I	GGYRCC	2 cut(s)	616, 1006
AccBSI	CCGCTC	2 cut(s)	279, 793
AccI	GTMKAC	1 cut(s)	603
AccII	CGCG	3 cut(s)	298, 706, 900
AclWI	GGATC	2 cut(s)	58, 763
AcoI	YGGCCR	3 cut(s)	274, 1056, 1124
AcyI	GRCGYC	1 cut(s)	582
AfaI	GTAC	1 cut(s)	344
AflIII	ACRYGT	4 cut(s)	40, 324, 500, 704
AgeI	ACCGGT	3 cut(s)	720, 811, 852
AgsI	TTSAA	4 cut(s)	364, 403, 568, 691
AhdI	GACNNNNNGTC	1 cut(s)	812
AhlI	ACTAGT	1 cut(s)	860
AjnI	CCWGG	1 cut(s)	1106
AleI	CACNNNNGTG	2 cut(s)	633, 863
AluBI	AGCT	3 cut(s)	92, 847, 1116
AluI	AGCT	3 cut(s)	92, 847, 1116
Alw26I	GTCTC	3 cut(s)	416, 750, 799
AlwI	GGATC	2 cut(s)	58, 763
Ama87I	CYCGRG	2 cut(s)	464, 956
AoxI	GGCC	7 cut(s)	264, 274, 516, 534, 901, 1056, 1124
ApeKI	GCWGC	5 cut(s)	112, 246, 293, 427, 1113
ArsI	GACNNNNNNTTYG	2 cut(s)	415, 447
AsiGI	ACCGGT	3 cut(s)	720, 811, 852
Asp700I	GAANNNNTTC	1 cut(s)	722
AspLEI	GCGC	4 cut(s)	293, 298, 392, 900
AspS9I	GGNCC	8 cut(s)	172, 264, 516, 622, 855, 902, 967, 1073
AsuC2I	CCSGG	5 cut(s)	515, 545, 742, 757, 777
AsuHPI	GGTGA	6 cut(s)	69, 551, 572, 832, 1035, 1063
AvaI	CYCGRG	2 cut(s)	464, 956
AvaII	GGWCC	5 cut(s)	172, 622, 855, 967, 1073
AxyI	CCTNAGG	1 cut(s)	531
BaeGI	GKGCMC	2 cut(s)	762, 1009
BanI	GGYRCC	2 cut(s)	616, 1006
BauI	CACGAG	1 cut(s)	596
BbvI	GCAGC	5 cut(s)	124, 258, 280, 414, 1125
BccI	CCATC	4 cut(s)	148, 218, 275, 1018
BceAI	ACGGC	4 cut(s)	17, 377, 911, 1071
BciT130I	CCWGG	1 cut(s)	1108
BcnI	CCSGG	5 cut(s)	515, 545, 742, 757, 777
BcoDI	GTCTC	3 cut(s)	416, 750, 799
BcuI	ACTAGT	1 cut(s)	860
BfaI	CTAG	3 cut(s)	89, 524, 861
BfoI	RGCGCY	1 cut(s)	294
BglI	GCCNNNNNGGC	1 cut(s)	263
BlpI	GCTNAGC	1 cut(s)	93
Bme1390I	CCNGG	6 cut(s)	515, 545, 742, 757, 777, 1108
Bme18I	GGWCC	5 cut(s)	172, 622, 855, 967, 1073
BmeRI	GACNNNNNGTC	1 cut(s)	812
BmeT110I	CYCGRG	2 cut(s)	464, 956
BmgT120I	GGNCC	8 cut(s)	172, 264, 516, 622, 855, 902, 967, 1073
BmiI	GGNNCC	8 cut(s)	265, 618, 660, 698, 725, 904, 1008, 1074
BmrFI	CCNGG	6 cut(s)	515, 545, 742, 757, 777, 1108
BmrI	ACTGGG	1 cut(s)	232
BmuI	ACTGGG	1 cut(s)	232
BpmI	CTGGAG	2 cut(s)	265, 295
Bpu1102I	GCTNAGC	1 cut(s)	93
BpuMI	CCSGG	5 cut(s)	515, 545, 742, 757, 777
BsaAI	YACGTR	1 cut(s)	501
BsaHI	GRCGYC	1 cut(s)	582
BsaI	GGTCTC	1 cut(s)	750
BsaJI	CCNNGG	3 cut(s)	14, 336, 740
BsaWI	WCCGGW	8 cut(s)	79, 505, 619, 720, 811, 840, 852, 969
Bse118I	RCCGGY	8 cut(s)	257, 536, 720, 729, 811, 852, 1096, 1126
Bse1I	ACTGG	2 cut(s)	238, 277
Bse21I	CCTNAGG	1 cut(s)	531
BseBI	CCWGG	1 cut(s)	1108
BseDI	CCNNGG	3 cut(s)	14, 336, 740
BseGI	GGATG	3 cut(s)	216, 460, 1032
BseMII	CTCAG	2 cut(s)	107, 545
BseNI	ACTGG	2 cut(s)	238, 277
BseRI	GAGGAG	1 cut(s)	62
BseSI	GKGCMC	2 cut(s)	762, 1009
BseX3I	CGGCCG	1 cut(s)	1124
BseXI	GCAGC	5 cut(s)	124, 258, 280, 414, 1125
Bsh1236I	CGCG	3 cut(s)	298, 706, 900
Bsh1285I	CGRYCG	4 cut(s)	549, 756, 816, 1127
BshFI	GGCC	7 cut(s)	266, 276, 518, 536, 903, 1058, 1126
BshNI	GGYRCC	2 cut(s)	616, 1006
BshTI	ACCGGT	3 cut(s)	720, 811, 852
BsiEI	CGRYCG	4 cut(s)	549, 756, 816, 1127
BsiHKCI	CYCGRG	2 cut(s)	464, 956
BslFI	GGGAC	2 cut(s)	929, 1086
BsmAI	GTCTC	3 cut(s)	416, 750, 799
BsmBI	CGTCTC	1 cut(s)	416
BsmFI	GGGAC	2 cut(s)	929, 1086
BsnI	GGCC	7 cut(s)	266, 276, 518, 536, 903, 1058, 1126
Bso31I	GGTCTC	1 cut(s)	750
BsoBI	CYCGRG	2 cut(s)	464, 956
Bsp1286I	GDGCHC	2 cut(s)	762, 1009
Bsp143I	GATC	5 cut(s)	63, 448, 713, 768, 831
Bsp1720I	GCTNAGC	1 cut(s)	93
BspANI	GGCC	7 cut(s)	266, 276, 518, 536, 903, 1058, 1126
BspCNI	CTCAG	2 cut(s)	106, 544
BspFNI	CGCG	3 cut(s)	298, 706, 900
BspLI	GGNNCC	8 cut(s)	265, 618, 660, 698, 725, 904, 1008, 1074
BspPI	GGATC	2 cut(s)	58, 763
BspT107I	GGYRCC	2 cut(s)	616, 1006
BspTNI	GGTCTC	1 cut(s)	750
BsrBI	CCGCTC	2 cut(s)	279, 793
BsrFI	RCCGGY	8 cut(s)	257, 536, 720, 729, 811, 852, 1096, 1126
BsrI	ACTGG	2 cut(s)	238, 277
BssAI	RCCGGY	8 cut(s)	257, 536, 720, 729, 811, 852, 1096, 1126
BssECI	CCNNGG	3 cut(s)	14, 336, 740
BssMI	GATC	5 cut(s)	63, 448, 713, 768, 831
BssNI	GRCGYC	1 cut(s)	582
BssSI	CACGAG	1 cut(s)	596
BssT1I	CCWWGG	1 cut(s)	336
Bst2BI	CACGAG	1 cut(s)	596
Bst2UI	CCWGG	1 cut(s)	1108
Bst4CI	ACNGT	4 cut(s)	608, 635, 920, 990
Bst6I	CTCTTC	2 cut(s)	62, 194
BstACI	GRCGYC	1 cut(s)	582
BstBAI	YACGTR	1 cut(s)	501
BstC8I	GCNNGC	4 cut(s)	259, 663, 704, 1128
BstDEI	CTNAG	2 cut(s)	93, 531
BstEII	GGTNACC	1 cut(s)	539
BstF5I	GGATG	3 cut(s)	216, 460, 1032
BstFNI	CGCG	3 cut(s)	298, 706, 900
BstH2I	RGCGCY	1 cut(s)	294
BstHHI	GCGC	4 cut(s)	293, 298, 392, 900
BstKTI	GATC	5 cut(s)	66, 451, 716, 771, 834
BstMAI	GTCTC	3 cut(s)	416, 750, 799
BstMBI	GATC	5 cut(s)	63, 448, 713, 768, 831
BstMCI	CGRYCG	4 cut(s)	549, 756, 816, 1127
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 396, 958
BstNI	CCWGG	1 cut(s)	1108
BstNSI	RCATGY	1 cut(s)	44
BstPI	GGTNACC	1 cut(s)	539
BstSCI	CCNGG	6 cut(s)	513, 543, 740, 755, 775, 1106
BstSLI	GKGCMC	2 cut(s)	762, 1009
BstUI	CGCG	3 cut(s)	298, 706, 900
BstV1I	GCAGC	5 cut(s)	124, 258, 280, 414, 1125
BstZI	CGGCCG	1 cut(s)	1124
Bsu36I	CCTNAGG	1 cut(s)	531
BsuRI	GGCC	7 cut(s)	266, 276, 518, 536, 903, 1058, 1126
BtsCI	GGATG	3 cut(s)	216, 460, 1032
BtsI	GCAGTG	1 cut(s)	223
BtsIMutI	CAGTG	4 cut(s)	223, 270, 640, 925
Cac8I	GCNNGC	4 cut(s)	259, 663, 704, 1128
CfoI	GCGC	4 cut(s)	293, 298, 392, 900
Cfr10I	RCCGGY	8 cut(s)	257, 536, 720, 729, 811, 852, 1096, 1126
Cfr13I	GGNCC	8 cut(s)	172, 264, 516, 622, 855, 902, 967, 1073
CseI	GACGC	3 cut(s)	238, 304, 433
Csp6I	GTAC	1 cut(s)	343
CspAI	ACCGGT	3 cut(s)	720, 811, 852
CviAII	CATG	4 cut(s)	41, 196, 452, 575
CviQI	GTAC	1 cut(s)	343
DdeI	CTNAG	2 cut(s)	93, 531
DpnI	GATC	5 cut(s)	65, 450, 715, 770, 833
DpnII	GATC	5 cut(s)	63, 448, 713, 768, 831
DraI	TTTAAA	1 cut(s)	979
DrdI	GACNNNNNNGTC	2 cut(s)	314, 548
DriI	GACNNNNNGTC	1 cut(s)	812
DseDI	GACNNNNNNGTC	2 cut(s)	314, 548
EaeI	YGGCCR	3 cut(s)	274, 1056, 1124
EagI	CGGCCG	1 cut(s)	1124
Eam1104I	CTCTTC	2 cut(s)	62, 194
Eam1105I	GACNNNNNGTC	1 cut(s)	812
EarI	CTCTTC	2 cut(s)	62, 194
EciI	GGCGGA	2 cut(s)	209, 716
EclXI	CGGCCG	1 cut(s)	1124
Eco130I	CCWWGG	1 cut(s)	336
Eco31I	GGTCTC	1 cut(s)	750
Eco47I	GGWCC	5 cut(s)	172, 622, 855, 967, 1073
Eco52I	CGGCCG	1 cut(s)	1124
Eco81I	CCTNAGG	1 cut(s)	531
Eco88I	CYCGRG	2 cut(s)	464, 956
Eco91I	GGTNACC	1 cut(s)	539
EcoO109I	RGGNCCY	1 cut(s)	1073
EcoO65I	GGTNACC	1 cut(s)	539
EcoRII	CCWGG	1 cut(s)	1106
EcoT14I	CCWWGG	1 cut(s)	336
ErhI	CCWWGG	1 cut(s)	336
Esp3I	CGTCTC	1 cut(s)	416
FaeI	CATG	4 cut(s)	44, 199, 455, 578
FaiI	YATR	6 cut(s)	42, 197, 453, 495, 576, 948
FaqI	GGGAC	2 cut(s)	929, 1086
FatI	CATG	4 cut(s)	40, 195, 451, 574
FauI	CCCGC	1 cut(s)	254
FblI	GTMKAC	1 cut(s)	603
FokI	GGATG	3 cut(s)	203, 447, 1039
FspBI	CTAG	3 cut(s)	89, 524, 861
GlaI	GCGC	4 cut(s)	292, 297, 391, 899
GsuI	CTGGAG	2 cut(s)	265, 295
HaeII	RGCGCY	1 cut(s)	294
HaeIII	GGCC	7 cut(s)	266, 276, 518, 536, 903, 1058, 1126
HgaI	GACGC	3 cut(s)	238, 304, 433
HhaI	GCGC	4 cut(s)	293, 298, 392, 900
Hin1I	GRCGYC	1 cut(s)	582
Hin1II	CATG	4 cut(s)	44, 199, 455, 578
Hin6I	GCGC	4 cut(s)	291, 296, 390, 898
HinP1I	GCGC	4 cut(s)	291, 296, 390, 898
HincII	GTYRAC	1 cut(s)	604
HindII	GTYRAC	1 cut(s)	604
HinfI	GANTC	6 cut(s)	4, 201, 303, 308, 436, 611
HphI	GGTGA	6 cut(s)	69, 551, 572, 832, 1035, 1063
Hpy166II	GTNNAC	8 cut(s)	253, 302, 604, 673, 679, 798, 858, 893
Hpy188I	TCNGA	2 cut(s)	232, 985
Hpy188III	TCNNGA	6 cut(s)	61, 104, 282, 331, 464, 524
Hpy8I	GTNNAC	8 cut(s)	253, 302, 604, 673, 679, 798, 858, 893
Hpy99I	CGWCG	4 cut(s)	182, 554, 584, 587
HpyAV	CCTTC	3 cut(s)	878, 1042, 1086
HpyCH4III	ACNGT	4 cut(s)	608, 635, 920, 990
HpyCH4IV	ACGT	5 cut(s)	326, 500, 582, 675, 1062
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 396, 958
HpyF3I	CTNAG	2 cut(s)	93, 531
HpySE526I	ACGT	5 cut(s)	326, 500, 582, 675, 1062
Hsp92I	GRCGYC	1 cut(s)	582
Hsp92II	CATG	4 cut(s)	44, 199, 455, 578
HspAI	GCGC	4 cut(s)	291, 296, 390, 898
KroI	GCCGGC	2 cut(s)	257, 1126
KroNI	GCCGGC	2 cut(s)	259, 1128
Kzo9I	GATC	5 cut(s)	63, 448, 713, 768, 831
LmnI	GCTCC	6 cut(s)	233, 284, 377, 658, 790, 1110
Lsp1109I	GCAGC	5 cut(s)	124, 258, 280, 414, 1125
MaeI	CTAG	3 cut(s)	89, 524, 861
MaeII	ACGT	5 cut(s)	326, 500, 582, 675, 1062
MaeIII	GTNAC	5 cut(s)	539, 608, 635, 1041, 1051
MalI	GATC	5 cut(s)	65, 450, 715, 770, 833
MbiI	CCGCTC	2 cut(s)	279, 793
MboI	GATC	5 cut(s)	63, 448, 713, 768, 831
MboII	GAAGA	5 cut(s)	49, 181, 196, 662, 723
MhlI	GDGCHC	2 cut(s)	762, 1009
MluCI	AATT	1 cut(s)	1131
MluI	ACGCGT	1 cut(s)	704
MlyI	GAGTC	3 cut(s)	297, 302, 605
MmeI	TCCRAC	2 cut(s)	363, 796
MreI	CGCCGGCG	1 cut(s)	257
MroNI	GCCGGC	2 cut(s)	257, 1126
MroXI	GAANNNNTTC	1 cut(s)	722
MseI	TTAA	3 cut(s)	978, 1038, 1135
MslI	CAYNNNNRTG	3 cut(s)	167, 633, 863
MspR9I	CCNGG	6 cut(s)	515, 545, 742, 757, 777, 1108
MteI	GCGCNGCGC	1 cut(s)	294
MvaI	CCWGG	1 cut(s)	1108
MvnI	CGCG	3 cut(s)	298, 706, 900
MwoI	GCNNNNNNNGC	3 cut(s)	263, 396, 958
NaeI	GCCGGC	2 cut(s)	259, 1128
NciI	CCSGG	5 cut(s)	515, 545, 742, 757, 777
NdeII	GATC	5 cut(s)	63, 448, 713, 768, 831
NgoMIV	GCCGGC	2 cut(s)	257, 1126
NlaIII	CATG	4 cut(s)	44, 199, 455, 578
NlaIV	GGNNCC	8 cut(s)	265, 618, 660, 698, 725, 904, 1008, 1074
NmeAIII	GCCGAG	2 cut(s)	593, 903
NmuCI	GTSAC	5 cut(s)	539, 608, 635, 1041, 1051
NspI	RCATGY	1 cut(s)	44
OliI	CACNNNNGTG	2 cut(s)	633, 863
PaeR7I	CTCGAG	1 cut(s)	956
PciI	ACATGT	1 cut(s)	40
PcsI	WCGNNNNNNNCGW	3 cut(s)	174, 312, 576
PdiI	GCCGGC	2 cut(s)	259, 1128
PdmI	GAANNNNTTC	1 cut(s)	722
PfeI	GAWTC	3 cut(s)	4, 201, 436
PflFI	GACNNNGTC	2 cut(s)	545, 581
PinAI	ACCGGT	3 cut(s)	720, 811, 852
PleI	GAGTC	3 cut(s)	297, 302, 605
PpsI	GAGTC	3 cut(s)	297, 302, 605
Ppu21I	YACGTR	1 cut(s)	501
PpuMI	RGGWCCY	1 cut(s)	1073
PscI	ACATGT	1 cut(s)	40
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	1 cut(s)	1106
PspEI	GGTNACC	1 cut(s)	539
PspGI	CCWGG	1 cut(s)	1106
PspN4I	GGNNCC	8 cut(s)	265, 618, 660, 698, 725, 904, 1008, 1074
PspPI	GGNCC	8 cut(s)	172, 264, 516, 622, 855, 902, 967, 1073
PspPPI	RGGWCCY	1 cut(s)	1073
PspXI	VCTCGAGB	1 cut(s)	956
PsyI	GACNNNGTC	2 cut(s)	545, 581
RsaI	GTAC	1 cut(s)	344
RsaNI	GTAC	1 cut(s)	343
RseI	CAYNNNNRTG	3 cut(s)	167, 633, 863
SalI	GTCGAC	1 cut(s)	602
SaqAI	TTAA	3 cut(s)	978, 1038, 1135
Sau3AI	GATC	5 cut(s)	63, 448, 713, 768, 831
Sau96I	GGNCC	8 cut(s)	172, 264, 516, 622, 855, 902, 967, 1073
SchI	GAGTC	3 cut(s)	297, 302, 605
ScrFI	CCNGG	6 cut(s)	515, 545, 742, 757, 777, 1108
SduI	GDGCHC	2 cut(s)	762, 1009
Sfr274I	CTCGAG	1 cut(s)	956
SgrAI	CRCCGGYG	1 cut(s)	257
SinI	GGWCC	5 cut(s)	172, 622, 855, 967, 1073
SlaI	CTCGAG	1 cut(s)	956
SmiI	ATTTAAAT	1 cut(s)	979
SmiMI	CAYNNNNRTG	3 cut(s)	167, 633, 863
SmlI	CTYRAG	1 cut(s)	956
SmoI	CTYRAG	1 cut(s)	956
SpeI	ACTAGT	1 cut(s)	860
Sse9I	AATT	1 cut(s)	1131
SspMI	CTAG	3 cut(s)	89, 524, 861
StyD4I	CCNGG	6 cut(s)	513, 543, 740, 755, 775, 1106
StyI	CCWWGG	1 cut(s)	336
SwaI	ATTTAAAT	1 cut(s)	979
TaaI	ACNGT	4 cut(s)	608, 635, 920, 990
TaiI	ACGT	5 cut(s)	329, 503, 585, 678, 1065
TasI	AATT	1 cut(s)	1131
TatI	WGTACW	1 cut(s)	342
TauI	GCSGC	5 cut(s)	50, 185, 279, 903, 955
TfiI	GAWTC	3 cut(s)	4, 201, 436
Tru1I	TTAA	3 cut(s)	978, 1038, 1135
Tru9I	TTAA	3 cut(s)	978, 1038, 1135
TscAI	CASTG	4 cut(s)	230, 277, 640, 925
TseFI	GTSAC	5 cut(s)	539, 608, 635, 1041, 1051
TseI	GCWGC	5 cut(s)	112, 246, 293, 427, 1113
Tsp45I	GTSAC	5 cut(s)	539, 608, 635, 1041, 1051
TspDTI	ATGAA	2 cut(s)	17, 449
TspGWI	ACGGA	2 cut(s)	654, 803
TspRI	CASTG	4 cut(s)	230, 277, 640, 925
Tth111I	GACNNNGTC	2 cut(s)	545, 581
VpaK11BI	GGWCC	5 cut(s)	172, 622, 855, 967, 1073
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	1 cut(s)	44
XcmI	CCANNNNNNNNNTGG	1 cut(s)	865
XhoI	CTCGAG	1 cut(s)	956
XmiI	GTMKAC	1 cut(s)	603
XmnI	GAANNNNTTC	1 cut(s)	722
XspI	CTAG	3 cut(s)	89, 524, 861
ZraI	GACGTC	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.