MD05G1031600.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
5100520 .. 5101629
1110 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1031600.v1.1.491

Sequence Viewer

Length: 1110 bp
ATGGACAACTCTCTCCAAGCCGTACTCGCAGCTGCCGCCAGCTTCTTCTTCGTAATCGTCATCTTCACCGCCGTCTACCTCCTCTTCAAGGGCTCAAAGAACAAATCCACCCGCTCCCGCCAAGCCCGTCCCCTCCGCAACCCGGCCGCCCTCTCCGCCATCAGCTTCGACGAGAGCACCTCCTTCGATCCGTCCCTCAAGTTCTCCATGGAAGAAGTCGTCAAGGCCACCAAGAACTTCTCCGCCGATCTCGTTGTCGGTGACGGCGGCTTCGGCCTTGTCTACAAGGCCCAACTCTCCGACGGCCTCACCGTCGCGATCAAGAAGCTCGATCCCGACGCGTTCCAAGGGTTTCGGGAATTTCAAGCCGAGATGGAAACCCTAGGTAAGCTTCGCCACCCGAACATCGTCAAAATGTTGGGATACTGCGTCTCCGGCGCCGATAGGATATTAATTTATGAGTTTATTTCCAAGGGAAATCTCGACCGTTGGCTTAATGACTCGTCGTCAACGGACGGTGACGGTTATGATGACGCGCCGGGGTTACGATTACCGTTATCTTGGAAAACGAGGATTAAGATCGTTAGGGGGGTGGCGAATGGGTTGGCATATTTGCATGGGCTGGAAAAGCCCATTATTCATAGGGATATTAAGGCCAGCAATGTGTTGTTGGACAAGGATTTTGAGGCCCATATTGCTGATTTTGGGCTGGCCAGGAGGATGGACTCCTCCCAATCCCACGTGTCGACGCAGTTTGCCGGCACGATGGGGTACATGCCCCCGGAATACAAGGAAGGGTTCACGGGAGCAACCGTGAGGGCGGACGTGTTTAGCTTTGGAATCTTGATGTTGGAGGTTGCGACCGGGAGAAGGCCGAATTTGCCGACCGTGCACGACGGGAACGAAATGGGGTTGGTGGAATGGGCTAGGAAAATGGTGGAACAAAATCGGCAAATGGAAATGGTGGATTCAGGCATTTCGAAGGAGGATTTGGATGAAGGGGGAGTTCAGGAGTATTTTAGCATTGCCATTTTATGTGCTTGTGAGATTTCAAGACAAAGGCCGGCCATGAAAGAAGTCATTGAAATGTTGAATCAAATTTCGACATGA

Protein Analysis

370

Amino Acids

40.84

Weight (kDa)

5.79

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 85 - 364 3.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 85 - 297 5.1e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013068)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 437
AccBSI CCGCTC 1 cut(s) 114
AccI GTMKAC 3 cut(s) 75, 282, 746
AccII CGCG 3 cut(s) 317, 341, 536
AclWI GGATC 2 cut(s) 182, 326
AcoI YGGCCR 3 cut(s) 144, 711, 1065
AcsI RAATTY 3 cut(s) 359, 877, 1098
AcvI CACGTG 1 cut(s) 742
AcyI GRCGYC 1 cut(s) 438
AfaI GTAC 2 cut(s) 24, 773
AfiI CCNNNNNNNGG 3 cut(s) 88, 142, 870
AflIII ACRYGT 3 cut(s) 339, 741, 825
AgsI TTSAA 5 cut(s) 88, 365, 1053, 1085, 1093
AhdI GACNNNNNGTC 1 cut(s) 505
AjiI CACGTC 1 cut(s) 826
AjnI CCWGG 1 cut(s) 713
AjuI GAANNNNNNNTTGG 2 cut(s) 974, 1006
AluBI AGCT 6 cut(s) 32, 42, 165, 328, 391, 834
AluI AGCT 6 cut(s) 32, 42, 165, 328, 391, 834
Alw21I GWGCWC 2 cut(s) 179, 894
Alw26I GTCTC 1 cut(s) 436
Alw44I GTGCAC 1 cut(s) 890
AlwI GGATC 2 cut(s) 182, 326
ApaLI GTGCAC 1 cut(s) 890
ApeKI GCWGC 2 cut(s) 29, 32
ApoI RAATTY 3 cut(s) 359, 877, 1098
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 665, 697
AseI ATTAAT 1 cut(s) 452
AspA2I CCTAGG 1 cut(s) 382
AspLEI GCGC 2 cut(s) 440, 538
AspS9I GGNCC 2 cut(s) 289, 688
AsuC2I CCSGG 4 cut(s) 143, 540, 782, 865
AsuHPI GGTGA 4 cut(s) 58, 272, 301, 530
AsuII TTCGAA 1 cut(s) 980
AvrII CCTAGG 1 cut(s) 382
BaeGI GKGCMC 1 cut(s) 894
BalI TGGCCA 1 cut(s) 713
BanI GGYRCC 1 cut(s) 437
BanII GRGCYC 1 cut(s) 95
BbrPI CACGTG 1 cut(s) 742
Bbv12I GWGCWC 2 cut(s) 179, 894
BbvI GCAGC 2 cut(s) 19, 41
BccI CCATC 4 cut(s) 167, 367, 715, 760
BceAI ACGGC 4 cut(s) 5, 56, 280, 319
BcgI CGANNNNNNTGC 2 cut(s) 166, 200
BciT130I CCWGG 1 cut(s) 715
BciVI GTATCC 1 cut(s) 416
BcnI CCSGG 4 cut(s) 143, 540, 782, 865
BcoDI GTCTC 1 cut(s) 436
BfaI CTAG 2 cut(s) 383, 927
BfoI RGCGCY 1 cut(s) 441
BfuI GTATCC 1 cut(s) 416
BisI GCNGC 5 cut(s) 30, 33, 36, 147, 268
BlnI CCTAGG 1 cut(s) 382
BlsI GCNGC 5 cut(s) 31, 34, 37, 148, 269
Bme1390I CCNGG 5 cut(s) 143, 540, 715, 782, 865
BmeRI GACNNNNNGTC 1 cut(s) 505
BmgBI CACGTC 1 cut(s) 826
BmgT120I GGNCC 2 cut(s) 289, 688
BmiI GGNNCC 1 cut(s) 439
BmrFI CCNGG 5 cut(s) 143, 540, 715, 782, 865
BplI GAGNNNNNCTC 2 cut(s) 164, 196
Bpu14I TTCGAA 1 cut(s) 980
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 4 cut(s) 143, 540, 782, 865
BsaAI YACGTR 1 cut(s) 742
BsaBI GATNNNNATC 1 cut(s) 578
BsaHI GRCGYC 1 cut(s) 438
BsaJI CCNNGG 6 cut(s) 207, 346, 382, 471, 539, 780
BsaXI ACNNNNNCTCC 4 cut(s) 416, 446, 798, 828
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 142, 870
Bse118I RCCGGY 2 cut(s) 758, 1063
Bse3DI GCAATG 2 cut(s) 667, 1023
Bse8I GATNNNNATC 1 cut(s) 578
BseBI CCWGG 1 cut(s) 715
BseDI CCNNGG 6 cut(s) 207, 346, 382, 471, 539, 780
BseGI GGATG 2 cut(s) 726, 1000
BseJI GATNNNNATC 1 cut(s) 578
BseLI CCNNNNNNNGG 3 cut(s) 88, 142, 870
BseMI GCAATG 2 cut(s) 667, 1023
BseRI GAGGAG 2 cut(s) 71, 718
BseSI GKGCMC 1 cut(s) 894
BseX3I CGGCCG 1 cut(s) 144
BseXI GCAGC 2 cut(s) 19, 41
Bsh1236I CGCG 3 cut(s) 317, 341, 536
Bsh1285I CGRYCG 4 cut(s) 147, 487, 864, 888
BshNI GGYRCC 1 cut(s) 437
BsiEI CGRYCG 4 cut(s) 147, 487, 864, 888
BsiHKAI GWGCWC 2 cut(s) 179, 894
BsiSI CCGG 7 cut(s) 143, 435, 539, 759, 782, 864, 1064
BslFI GGGAC 2 cut(s) 114, 178
BslI CCNNNNNNNGG 3 cut(s) 88, 142, 870
BsmAI GTCTC 1 cut(s) 436
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 2 cut(s) 114, 178
Bsp119I TTCGAA 1 cut(s) 980
Bsp1286I GDGCHC 3 cut(s) 95, 179, 894
Bsp143I GATC 5 cut(s) 187, 247, 318, 331, 579
Bsp19I CCATGG 1 cut(s) 207
Bsp68I TCGCGA 1 cut(s) 317
BspFNI CGCG 3 cut(s) 317, 341, 536
BspLI GGNNCC 1 cut(s) 439
BspPI GGATC 2 cut(s) 182, 326
BspT104I TTCGAA 1 cut(s) 980
BspT107I GGYRCC 1 cut(s) 437
BsrBI CCGCTC 1 cut(s) 114
BsrDI GCAATG 2 cut(s) 667, 1023
BsrFI RCCGGY 2 cut(s) 758, 1063
BssAI RCCGGY 2 cut(s) 758, 1063
BssECI CCNNGG 6 cut(s) 207, 346, 382, 471, 539, 780
BssMI GATC 5 cut(s) 187, 247, 318, 331, 579
BssNI GRCGYC 1 cut(s) 438
BssT1I CCWWGG 4 cut(s) 207, 346, 382, 471
Bst2UI CCWGG 1 cut(s) 715
Bst4CI ACNGT 7 cut(s) 313, 488, 518, 524, 555, 814, 889
Bst6I CTCTTC 1 cut(s) 89
BstACI GRCGYC 1 cut(s) 438
BstBAI YACGTR 1 cut(s) 742
BstBI TTCGAA 1 cut(s) 980
BstC8I GCNNGC 5 cut(s) 40, 658, 711, 760, 1065
BstDSI CCRYGG 1 cut(s) 207
BstENI CCTNNNNNAGG 1 cut(s) 86
BstF5I GGATG 2 cut(s) 726, 1000
BstFNI CGCG 3 cut(s) 317, 341, 536
BstH2I RGCGCY 1 cut(s) 441
BstHHI GCGC 2 cut(s) 440, 538
BstKTI GATC 5 cut(s) 190, 250, 321, 334, 582
BstMAI GTCTC 1 cut(s) 436
BstMBI GATC 5 cut(s) 187, 247, 318, 331, 579
BstMCI CGRYCG 4 cut(s) 147, 487, 864, 888
BstMWI GCNNNNNNNGC 9 cut(s) 26, 35, 155, 273, 435, 628, 695, 880, 889
BstNI CCWGG 1 cut(s) 715
BstNSI RCATGY 1 cut(s) 778
BstSCI CCNGG 5 cut(s) 141, 538, 713, 780, 863
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 3 cut(s) 317, 341, 536
BstV1I GCAGC 2 cut(s) 19, 41
BstXI CCANNNNNNTGG 1 cut(s) 721
BstZI CGGCCG 1 cut(s) 144
BsuI GTATCC 1 cut(s) 416
BtgI CCRYGG 1 cut(s) 207
BtrI CACGTC 1 cut(s) 826
BtsCI GGATG 2 cut(s) 726, 1000
BtuMI TCGCGA 1 cut(s) 317
Cac8I GCNNGC 5 cut(s) 40, 658, 711, 760, 1065
CfoI GCGC 2 cut(s) 440, 538
Cfr10I RCCGGY 2 cut(s) 758, 1063
Cfr13I GGNCC 2 cut(s) 289, 688
CseI GACGC 4 cut(s) 347, 418, 542, 757
Csp6I GTAC 2 cut(s) 23, 772
CviAII CATG 5 cut(s) 208, 617, 775, 1069, 1107
CviQI GTAC 2 cut(s) 23, 772
DinI GGCGCC 1 cut(s) 439
DpnI GATC 5 cut(s) 189, 249, 320, 333, 581
DpnII GATC 5 cut(s) 187, 247, 318, 331, 579
DriI GACNNNNNGTC 1 cut(s) 505
EaeI YGGCCR 3 cut(s) 144, 711, 1065
EagI CGGCCG 1 cut(s) 144
Eam1104I CTCTTC 1 cut(s) 89
Eam1105I GACNNNNNGTC 1 cut(s) 505
EarI CTCTTC 1 cut(s) 89
EciI GGCGGA 3 cut(s) 145, 232, 836
EclXI CGGCCG 1 cut(s) 144
Eco130I CCWWGG 4 cut(s) 207, 346, 382, 471
Eco24I GRGCYC 1 cut(s) 95
Eco52I CGGCCG 1 cut(s) 144
Eco72I CACGTG 1 cut(s) 742
EcoNI CCTNNNNNAGG 1 cut(s) 86
EcoRII CCWGG 1 cut(s) 713
EcoT14I CCWWGG 4 cut(s) 207, 346, 382, 471
EcoT38I GRGCYC 1 cut(s) 95
EgeI GGCGCC 1 cut(s) 439
EheI GGCGCC 1 cut(s) 439
ErhI CCWWGG 4 cut(s) 207, 346, 382, 471
Esp3I CGTCTC 1 cut(s) 436
FaeI CATG 5 cut(s) 211, 620, 778, 1072, 1110
FaqI GGGAC 2 cut(s) 114, 178
FatI CATG 5 cut(s) 207, 616, 774, 1068, 1106
FauI CCCGC 2 cut(s) 119, 125
FblI GTMKAC 3 cut(s) 75, 282, 746
Fnu4HI GCNGC 5 cut(s) 30, 33, 36, 147, 268
FokI GGATG 2 cut(s) 733, 1007
FriOI GRGCYC 1 cut(s) 95
FseI GGCCGGCC 1 cut(s) 1067
Fsp4HI GCNGC 5 cut(s) 30, 33, 36, 147, 268
FspBI CTAG 2 cut(s) 383, 927
GlaI GCGC 2 cut(s) 439, 537
GluI GCNGC 5 cut(s) 30, 33, 36, 147, 268
HaeII RGCGCY 1 cut(s) 441
HapII CCGG 7 cut(s) 143, 435, 539, 759, 782, 864, 1064
HgaI GACGC 4 cut(s) 347, 418, 542, 757
HhaI GCGC 2 cut(s) 440, 538
Hin1I GRCGYC 1 cut(s) 438
Hin1II CATG 5 cut(s) 211, 620, 778, 1072, 1110
Hin6I GCGC 2 cut(s) 438, 536
HinP1I GCGC 2 cut(s) 438, 536
HincII GTYRAC 2 cut(s) 510, 747
HindII GTYRAC 2 cut(s) 510, 747
HindIII AAGCTT 1 cut(s) 389
HinfI GANTC 5 cut(s) 500, 725, 840, 968, 1093
HpaII CCGG 7 cut(s) 143, 435, 539, 759, 782, 864, 1064
HphI GGTGA 4 cut(s) 58, 272, 301, 530
Hpy166II GTNNAC 6 cut(s) 76, 283, 510, 747, 801, 892
Hpy188I TCNGA 1 cut(s) 301
Hpy188III TCNNGA 8 cut(s) 316, 322, 335, 356, 482, 844, 1010, 1053
Hpy8I GTNNAC 6 cut(s) 76, 283, 510, 747, 801, 892
Hpy99I CGWCG 7 cut(s) 173, 305, 317, 341, 508, 751, 899
HpyAV CCTTC 5 cut(s) 193, 788, 864, 976, 992
HpyCH4III ACNGT 7 cut(s) 313, 488, 518, 524, 555, 814, 889
HpyCH4IV ACGT 2 cut(s) 741, 825
HpyCH4V TGCA 2 cut(s) 616, 892
HpyF10VI GCNNNNNNNGC 9 cut(s) 26, 35, 155, 273, 435, 628, 695, 880, 889
HpySE526I ACGT 2 cut(s) 741, 825
Hsp92I GRCGYC 1 cut(s) 438
Hsp92II CATG 5 cut(s) 211, 620, 778, 1072, 1110
HspAI GCGC 2 cut(s) 438, 536
KasI GGCGCC 1 cut(s) 437
KroI GCCGGC 2 cut(s) 758, 1063
KroNI GCCGGC 2 cut(s) 760, 1065
Kzo9I GATC 5 cut(s) 187, 247, 318, 331, 579
LmnI GCTCC 2 cut(s) 119, 806
Lsp1109I GCAGC 2 cut(s) 19, 41
MaeI CTAG 2 cut(s) 383, 927
MaeII ACGT 2 cut(s) 741, 825
MaeIII GTNAC 3 cut(s) 260, 518, 543
MalI GATC 5 cut(s) 189, 249, 320, 333, 581
MbiI CCGCTC 1 cut(s) 114
MboI GATC 5 cut(s) 187, 247, 318, 331, 579
MboII GAAGA 5 cut(s) 37, 40, 55, 76, 224
MhlI GDGCHC 3 cut(s) 95, 179, 894
MlsI TGGCCA 1 cut(s) 713
MluCI AATT 4 cut(s) 359, 453, 877, 1098
MluI ACGCGT 1 cut(s) 339
MluNI TGGCCA 1 cut(s) 713
Mly113I GGCGCC 1 cut(s) 438
MlyI GAGTC 2 cut(s) 494, 719
MmeI TCCRAC 3 cut(s) 324, 651, 831
Mox20I TGGCCA 1 cut(s) 713
MroNI GCCGGC 2 cut(s) 758, 1063
MscI TGGCCA 1 cut(s) 713
MseI TTAA 4 cut(s) 452, 495, 576, 651
MslI CAYNNNNRTG 1 cut(s) 1085
Msp20I TGGCCA 1 cut(s) 713
MspA1I CMGCKG 1 cut(s) 32
MspI CCGG 7 cut(s) 143, 435, 539, 759, 782, 864, 1064
MspR9I CCNGG 5 cut(s) 143, 540, 715, 782, 865
MvaI CCWGG 1 cut(s) 715
MvnI CGCG 3 cut(s) 317, 341, 536
MwoI GCNNNNNNNGC 9 cut(s) 26, 35, 155, 273, 435, 628, 695, 880, 889
NaeI GCCGGC 2 cut(s) 760, 1065
NarI GGCGCC 1 cut(s) 438
NciI CCSGG 4 cut(s) 143, 540, 782, 865
NcoI CCATGG 1 cut(s) 207
NdeII GATC 5 cut(s) 187, 247, 318, 331, 579
NgoMIV GCCGGC 2 cut(s) 758, 1063
NlaIII CATG 5 cut(s) 211, 620, 778, 1072, 1110
NlaIV GGNNCC 1 cut(s) 439
NmeAIII GCCGAG 1 cut(s) 394
NmuCI GTSAC 2 cut(s) 260, 518
NruI TCGCGA 1 cut(s) 317
NspI RCATGY 1 cut(s) 778
NspV TTCGAA 1 cut(s) 980
PcsI WCGNNNNNNNCGW 2 cut(s) 309, 900
PdiI GCCGGC 2 cut(s) 760, 1065
PfeI GAWTC 3 cut(s) 840, 968, 1093
PkrI GCNGC 5 cut(s) 31, 34, 37, 148, 269
PleI GAGTC 2 cut(s) 494, 719
PluTI GGCGCC 1 cut(s) 441
PmaCI CACGTG 1 cut(s) 742
PmlI CACGTG 1 cut(s) 742
PpsI GAGTC 2 cut(s) 494, 719
Ppu21I YACGTR 1 cut(s) 742
PshBI ATTAAT 1 cut(s) 452
Psp6I CCWGG 1 cut(s) 713
PspCI CACGTG 1 cut(s) 742
PspGI CCWGG 1 cut(s) 713
PspN4I GGNNCC 1 cut(s) 439
PspPI GGNCC 2 cut(s) 289, 688
PvuII CAGCTG 1 cut(s) 32
RigI GGCCGGCC 1 cut(s) 1067
RruI TCGCGA 1 cut(s) 317
RsaI GTAC 2 cut(s) 24, 773
RsaNI GTAC 2 cut(s) 23, 772
RseI CAYNNNNRTG 1 cut(s) 1085
SalI GTCGAC 1 cut(s) 745
SaqAI TTAA 4 cut(s) 452, 495, 576, 651
SatI GCNGC 5 cut(s) 30, 33, 36, 147, 268
Sau3AI GATC 5 cut(s) 187, 247, 318, 331, 579
Sau96I GGNCC 2 cut(s) 289, 688
SchI GAGTC 2 cut(s) 494, 719
ScrFI CCNGG 5 cut(s) 143, 540, 715, 782, 865
SduI GDGCHC 3 cut(s) 95, 179, 894
SfoI GGCGCC 1 cut(s) 439
SfuI TTCGAA 1 cut(s) 980
SmiMI CAYNNNNRTG 1 cut(s) 1085
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
Sse9I AATT 4 cut(s) 359, 453, 877, 1098
SspDI GGCGCC 1 cut(s) 437
SspMI CTAG 2 cut(s) 383, 927
StyD4I CCNGG 5 cut(s) 141, 538, 713, 780, 863
StyI CCWWGG 4 cut(s) 207, 346, 382, 471
TaaI ACNGT 7 cut(s) 313, 488, 518, 524, 555, 814, 889
TaiI ACGT 2 cut(s) 744, 828
TaqI TCGA 7 cut(s) 168, 186, 330, 483, 746, 980, 1103
TasI AATT 4 cut(s) 359, 453, 877, 1098
TauI GCSGC 3 cut(s) 38, 149, 270
TfiI GAWTC 3 cut(s) 840, 968, 1093
Tru1I TTAA 4 cut(s) 452, 495, 576, 651
Tru9I TTAA 4 cut(s) 452, 495, 576, 651
TseFI GTSAC 2 cut(s) 260, 518
TseI GCWGC 2 cut(s) 29, 32
Tsp45I GTSAC 2 cut(s) 260, 518
TspDTI ATGAA 3 cut(s) 629, 1011, 1085
TspGWI ACGGA 2 cut(s) 180, 527
VneI GTGCAC 1 cut(s) 890
VspI ATTAAT 1 cut(s) 452
XagI CCTNNNNNAGG 1 cut(s) 86
XapI RAATTY 3 cut(s) 359, 877, 1098
XceI RCATGY 1 cut(s) 778
XmaJI CCTAGG 1 cut(s) 382
XmiI GTMKAC 3 cut(s) 75, 282, 746
XspI CTAG 2 cut(s) 383, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.