pycom05g02290
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
2604532 .. 2605641
1110 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g02290.1

Sequence Viewer

Length: 1110 bp
ATGCCCGTGGACAATTCTCTCCAAGCCGTAATCGCAGCTGCCGCCAGCTTCTTCTTCGTAACCGTCATCTTCACCGCCGTCTACCTCCTCTTCAAGGGCTCCAAGAACAAATCCACCCGCTCCCGCCAAGCCCGTCCCCTCCGCAACCCGGCCGCCCTCTCCGCCATCAGCGTCGACGAGACCACCTCCTTCGATCCGTCCCTCAAGTTCTCCATGGAAGAAGTCGTCAAGGCCACCAAGAACTTCTCCGCTGATCTCGTTGTCGGTGACGGCGGCTTCGGCCTTGTCTACAAGGCCCAACTCTCCGACGGCCTCACCGTCGCGATCAAGAAGCTCGATCCCGACGCGTTCCAAGGGTTTCGGGAATTTCAGGCCGAGATGGAAACCCTAGGTAAGCTTCGCCACCCGAACATCGTCAAAATGTTGGGATACTGCGTCTCCGGCGCCGATAGGATATTAATTTATGAGTTTATTTCCAAGGGAAATCTCGACCTTTGGCTTAATGACTCGTCGTCAACGGACGGTGACGGTTATGATGACGCGCCGGGGTTACGATTACCGTTATCTTGGAAAACGAGGATTAAGATCGTTAGTGGGGTGGCGAATGGGTTGGCATATTTGCATGGGCTGGAAAAGCCCATTATTCATAGGGACATCAAGGCCAGCAATGTGTTGTTGGACAAGGATTTTGAGGCCCATATTGCTGATTTTGGACTGGCCAGGAGGATGGATGCCTCCCAGTCCCACGTGTCGACGCAATTTGCCGGCACGATGGGGTACATGCCCCCGGAATACAAGGAAGGGTTCACGAGGGCAACCGTGAGGGCGGACGTGTTTAGCTTTGGGATCTTAATGTTGGAGGTTGCGACCGGGAGGCGGCCGAATTTGCCGACCGACGGGAAGGAAATGGGCTTGGTGGAATGGGCTAGGAAAATGAGGGAACAAAATCGGCACATGGAAATGGTGGATTCAGGCATTTCGATGGAGGATTTGGATGAAGGGGAAGTTAAGGAGTATTTTAGCATTGCCATTTTATGTGCTTGTGAGATTTCAAAACAAAGGCCGGCCATGAAAGAAGTCATTGAAATGTTGAATCAAATTTCGACATGA

Protein Analysis

370

Amino Acids

40.85

Weight (kDa)

5.8

Isoelectric Point (pI)

33.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 87 - 364 6.3e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 87 - 361 1.9e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013068)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 443
AccBSI CCGCTC 1 cut(s) 120
AccI GTMKAC 4 cut(s) 81, 174, 288, 752
AccII CGCG 3 cut(s) 323, 347, 542
AclWI GGATC 3 cut(s) 188, 332, 854
AcoI YGGCCR 4 cut(s) 150, 717, 878, 1065
AcsI RAATTY 3 cut(s) 365, 883, 1098
AcvI CACGTG 1 cut(s) 748
AcyI GRCGYC 1 cut(s) 444
AfaI GTAC 1 cut(s) 779
AfiI CCNNNNNNNGG 4 cut(s) 94, 148, 876, 896
AflIII ACRYGT 3 cut(s) 345, 747, 831
AgsI TTSAA 4 cut(s) 94, 1053, 1085, 1093
AhdI GACNNNNNGTC 1 cut(s) 511
AjiI CACGTC 1 cut(s) 832
AjnI CCWGG 1 cut(s) 719
AluBI AGCT 5 cut(s) 38, 48, 334, 397, 840
AluI AGCT 5 cut(s) 38, 48, 334, 397, 840
Alw26I GTCTC 2 cut(s) 173, 442
AlwI GGATC 3 cut(s) 188, 332, 854
ApeKI GCWGC 2 cut(s) 35, 38
ApoI RAATTY 3 cut(s) 365, 883, 1098
ArsI GACNNNNNNTTYG 4 cut(s) 260, 292, 671, 703
AseI ATTAAT 1 cut(s) 458
AspA2I CCTAGG 1 cut(s) 388
AspLEI GCGC 2 cut(s) 446, 544
AspS9I GGNCC 2 cut(s) 295, 694
AsuC2I CCSGG 4 cut(s) 149, 546, 788, 871
AsuHPI GGTGA 4 cut(s) 64, 278, 307, 536
AvrII CCTAGG 1 cut(s) 388
BalI TGGCCA 1 cut(s) 719
BanI GGYRCC 1 cut(s) 443
BanII GRGCYC 1 cut(s) 101
BauI CACGAG 1 cut(s) 808
BbrPI CACGTG 1 cut(s) 748
BbvI GCAGC 2 cut(s) 25, 47
BccI CCATC 5 cut(s) 173, 373, 721, 766, 976
BceAI ACGGC 4 cut(s) 11, 62, 286, 325
BciT130I CCWGG 1 cut(s) 721
BciVI GTATCC 1 cut(s) 422
BcnI CCSGG 4 cut(s) 149, 546, 788, 871
BcoDI GTCTC 2 cut(s) 173, 442
BfaI CTAG 2 cut(s) 389, 927
BfoI RGCGCY 1 cut(s) 447
BfuI GTATCC 1 cut(s) 422
BisI GCNGC 6 cut(s) 36, 39, 42, 153, 274, 878
BlnI CCTAGG 1 cut(s) 388
BlsI GCNGC 6 cut(s) 37, 40, 43, 154, 275, 879
Bme1390I CCNGG 5 cut(s) 149, 546, 721, 788, 871
BmeRI GACNNNNNGTC 1 cut(s) 511
BmgBI CACGTC 1 cut(s) 832
BmgT120I GGNCC 2 cut(s) 295, 694
BmiI GGNNCC 2 cut(s) 100, 445
BmrFI CCNGG 5 cut(s) 149, 546, 721, 788, 871
BmrI ACTGGG 1 cut(s) 733
BmsI GCATC 1 cut(s) 721
BmuI ACTGGG 1 cut(s) 733
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 188
BpuMI CCSGG 4 cut(s) 149, 546, 788, 871
BsaAI YACGTR 1 cut(s) 748
BsaBI GATNNNNATC 1 cut(s) 584
BsaHI GRCGYC 1 cut(s) 444
BsaI GGTCTC 1 cut(s) 173
BsaJI CCNNGG 7 cut(s) 6, 213, 352, 388, 477, 545, 786
BsaXI ACNNNNNCTCC 2 cut(s) 422, 452
Bsc4I CCNNNNNNNGG 4 cut(s) 94, 148, 876, 896
Bse118I RCCGGY 2 cut(s) 764, 1063
Bse1I ACTGG 2 cut(s) 720, 739
Bse3DI GCAATG 2 cut(s) 673, 1023
Bse8I GATNNNNATC 1 cut(s) 584
BseBI CCWGG 1 cut(s) 721
BseDI CCNNGG 7 cut(s) 6, 213, 352, 388, 477, 545, 786
BseGI GGATG 3 cut(s) 732, 736, 1000
BseJI GATNNNNATC 1 cut(s) 584
BseLI CCNNNNNNNGG 4 cut(s) 94, 148, 876, 896
BseMI GCAATG 2 cut(s) 673, 1023
BseNI ACTGG 2 cut(s) 720, 739
BseRI GAGGAG 1 cut(s) 77
BseX3I CGGCCG 2 cut(s) 150, 878
BseXI GCAGC 2 cut(s) 25, 47
Bsh1236I CGCG 3 cut(s) 323, 347, 542
Bsh1285I CGRYCG 4 cut(s) 153, 870, 881, 894
BshNI GGYRCC 1 cut(s) 443
BsiEI CGRYCG 4 cut(s) 153, 870, 881, 894
BsiSI CCGG 7 cut(s) 149, 441, 545, 765, 788, 870, 1064
BslFI GGGAC 4 cut(s) 120, 184, 665, 727
BslI CCNNNNNNNGG 4 cut(s) 94, 148, 876, 896
BsmAI GTCTC 2 cut(s) 173, 442
BsmBI CGTCTC 1 cut(s) 442
BsmFI GGGAC 4 cut(s) 120, 184, 665, 727
Bso31I GGTCTC 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 101
Bsp143I GATC 6 cut(s) 193, 253, 324, 337, 585, 846
Bsp19I CCATGG 1 cut(s) 213
Bsp68I TCGCGA 1 cut(s) 323
BspFNI CGCG 3 cut(s) 323, 347, 542
BspLI GGNNCC 2 cut(s) 100, 445
BspPI GGATC 3 cut(s) 188, 332, 854
BspT107I GGYRCC 1 cut(s) 443
BspTNI GGTCTC 1 cut(s) 173
BsrBI CCGCTC 1 cut(s) 120
BsrDI GCAATG 2 cut(s) 673, 1023
BsrFI RCCGGY 2 cut(s) 764, 1063
BsrI ACTGG 2 cut(s) 720, 739
BssAI RCCGGY 2 cut(s) 764, 1063
BssECI CCNNGG 7 cut(s) 6, 213, 352, 388, 477, 545, 786
BssMI GATC 6 cut(s) 193, 253, 324, 337, 585, 846
BssNI GRCGYC 1 cut(s) 444
BssSI CACGAG 1 cut(s) 808
BssT1I CCWWGG 4 cut(s) 213, 352, 388, 477
Bst2BI CACGAG 1 cut(s) 808
Bst2UI CCWGG 1 cut(s) 721
Bst4CI ACNGT 6 cut(s) 64, 319, 524, 530, 561, 820
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 1 cut(s) 444
BstBAI YACGTR 1 cut(s) 748
BstC8I GCNNGC 4 cut(s) 46, 664, 766, 1065
BstDSI CCRYGG 2 cut(s) 6, 213
BstENI CCTNNNNNAGG 1 cut(s) 92
BstF5I GGATG 3 cut(s) 732, 736, 1000
BstFNI CGCG 3 cut(s) 323, 347, 542
BstH2I RGCGCY 1 cut(s) 447
BstHHI GCGC 2 cut(s) 446, 544
BstKTI GATC 6 cut(s) 196, 256, 327, 340, 588, 849
BstMAI GTCTC 2 cut(s) 173, 442
BstMBI GATC 6 cut(s) 193, 253, 324, 337, 585, 846
BstMCI CGRYCG 4 cut(s) 153, 870, 881, 894
BstMWI GCNNNNNNNGC 8 cut(s) 32, 41, 161, 279, 441, 634, 701, 886
BstNI CCWGG 1 cut(s) 721
BstNSI RCATGY 1 cut(s) 784
BstSCI CCNGG 5 cut(s) 147, 544, 719, 786, 869
BstUI CGCG 3 cut(s) 323, 347, 542
BstV1I GCAGC 2 cut(s) 25, 47
BstX2I RGATCY 1 cut(s) 846
BstXI CCANNNNNNTGG 1 cut(s) 727
BstYI RGATCY 1 cut(s) 846
BstZI CGGCCG 2 cut(s) 150, 878
BsuI GTATCC 1 cut(s) 422
BtgI CCRYGG 2 cut(s) 6, 213
BtrI CACGTC 1 cut(s) 832
BtsCI GGATG 3 cut(s) 732, 736, 1000
BtuMI TCGCGA 1 cut(s) 323
Cac8I GCNNGC 4 cut(s) 46, 664, 766, 1065
CfoI GCGC 2 cut(s) 446, 544
Cfr10I RCCGGY 2 cut(s) 764, 1063
Cfr13I GGNCC 2 cut(s) 295, 694
CseI GACGC 5 cut(s) 160, 353, 424, 548, 763
Csp6I GTAC 1 cut(s) 778
CviAII CATG 6 cut(s) 214, 623, 781, 955, 1069, 1107
CviQI GTAC 1 cut(s) 778
DinI GGCGCC 1 cut(s) 445
DpnI GATC 6 cut(s) 195, 255, 326, 339, 587, 848
DpnII GATC 6 cut(s) 193, 253, 324, 337, 585, 846
DriI GACNNNNNGTC 1 cut(s) 511
EaeI YGGCCR 4 cut(s) 150, 717, 878, 1065
EagI CGGCCG 2 cut(s) 150, 878
Eam1104I CTCTTC 1 cut(s) 95
Eam1105I GACNNNNNGTC 1 cut(s) 511
EarI CTCTTC 1 cut(s) 95
EciI GGCGGA 2 cut(s) 151, 842
EclXI CGGCCG 2 cut(s) 150, 878
Eco130I CCWWGG 4 cut(s) 213, 352, 388, 477
Eco24I GRGCYC 1 cut(s) 101
Eco31I GGTCTC 1 cut(s) 173
Eco52I CGGCCG 2 cut(s) 150, 878
Eco72I CACGTG 1 cut(s) 748
EcoNI CCTNNNNNAGG 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 719
EcoT14I CCWWGG 4 cut(s) 213, 352, 388, 477
EcoT38I GRGCYC 1 cut(s) 101
EgeI GGCGCC 1 cut(s) 445
EheI GGCGCC 1 cut(s) 445
ErhI CCWWGG 4 cut(s) 213, 352, 388, 477
Esp3I CGTCTC 1 cut(s) 442
FaeI CATG 6 cut(s) 217, 626, 784, 958, 1072, 1110
FaqI GGGAC 4 cut(s) 120, 184, 665, 727
FatI CATG 6 cut(s) 213, 622, 780, 954, 1068, 1106
FauI CCCGC 2 cut(s) 125, 131
FblI GTMKAC 4 cut(s) 81, 174, 288, 752
Fnu4HI GCNGC 6 cut(s) 36, 39, 42, 153, 274, 878
FokI GGATG 3 cut(s) 739, 743, 1007
FriOI GRGCYC 1 cut(s) 101
FseI GGCCGGCC 1 cut(s) 1067
Fsp4HI GCNGC 6 cut(s) 36, 39, 42, 153, 274, 878
FspBI CTAG 2 cut(s) 389, 927
GlaI GCGC 2 cut(s) 445, 543
GluI GCNGC 6 cut(s) 36, 39, 42, 153, 274, 878
HaeII RGCGCY 1 cut(s) 447
HapII CCGG 7 cut(s) 149, 441, 545, 765, 788, 870, 1064
HgaI GACGC 5 cut(s) 160, 353, 424, 548, 763
HhaI GCGC 2 cut(s) 446, 544
Hin1I GRCGYC 1 cut(s) 444
Hin1II CATG 6 cut(s) 217, 626, 784, 958, 1072, 1110
Hin6I GCGC 2 cut(s) 444, 542
HinP1I GCGC 2 cut(s) 444, 542
HincII GTYRAC 3 cut(s) 175, 516, 753
HindII GTYRAC 3 cut(s) 175, 516, 753
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 3 cut(s) 506, 968, 1093
HpaII CCGG 7 cut(s) 149, 441, 545, 765, 788, 870, 1064
HphI GGTGA 4 cut(s) 64, 278, 307, 536
Hpy166II GTNNAC 7 cut(s) 10, 82, 175, 289, 516, 753, 807
Hpy188I TCNGA 1 cut(s) 307
Hpy188III TCNNGA 6 cut(s) 322, 328, 341, 362, 488, 808
Hpy8I GTNNAC 7 cut(s) 10, 82, 175, 289, 516, 753, 807
Hpy99I CGWCG 8 cut(s) 176, 179, 311, 323, 347, 514, 757, 899
HpyAV CCTTC 4 cut(s) 199, 794, 895, 992
HpyCH4III ACNGT 6 cut(s) 64, 319, 524, 530, 561, 820
HpyCH4IV ACGT 2 cut(s) 747, 831
HpyCH4V TGCA 1 cut(s) 622
HpyF10VI GCNNNNNNNGC 8 cut(s) 32, 41, 161, 279, 441, 634, 701, 886
HpySE526I ACGT 2 cut(s) 747, 831
Hsp92I GRCGYC 1 cut(s) 444
Hsp92II CATG 6 cut(s) 217, 626, 784, 958, 1072, 1110
HspAI GCGC 2 cut(s) 444, 542
KasI GGCGCC 1 cut(s) 443
KroI GCCGGC 2 cut(s) 764, 1063
KroNI GCCGGC 2 cut(s) 766, 1065
Kzo9I GATC 6 cut(s) 193, 253, 324, 337, 585, 846
LmnI GCTCC 2 cut(s) 104, 125
Lsp1109I GCAGC 2 cut(s) 25, 47
LweI GCATC 1 cut(s) 721
MaeI CTAG 2 cut(s) 389, 927
MaeII ACGT 2 cut(s) 747, 831
MaeIII GTNAC 4 cut(s) 58, 266, 524, 549
MalI GATC 6 cut(s) 195, 255, 326, 339, 587, 848
MbiI CCGCTC 1 cut(s) 120
MboI GATC 6 cut(s) 193, 253, 324, 337, 585, 846
MboII GAAGA 5 cut(s) 43, 46, 61, 82, 230
MflI RGATCY 1 cut(s) 846
MhlI GDGCHC 1 cut(s) 101
MlsI TGGCCA 1 cut(s) 719
MluCI AATT 6 cut(s) 13, 365, 459, 758, 883, 1098
MluI ACGCGT 1 cut(s) 345
MluNI TGGCCA 1 cut(s) 719
Mly113I GGCGCC 1 cut(s) 444
MlyI GAGTC 1 cut(s) 500
MmeI TCCRAC 3 cut(s) 330, 657, 837
Mox20I TGGCCA 1 cut(s) 719
MroNI GCCGGC 2 cut(s) 764, 1063
MscI TGGCCA 1 cut(s) 719
MseI TTAA 5 cut(s) 458, 501, 582, 851, 1008
MslI CAYNNNNRTG 3 cut(s) 959, 980, 1085
Msp20I TGGCCA 1 cut(s) 719
MspA1I CMGCKG 2 cut(s) 38, 251
MspI CCGG 7 cut(s) 149, 441, 545, 765, 788, 870, 1064
MspR9I CCNGG 5 cut(s) 149, 546, 721, 788, 871
MvaI CCWGG 1 cut(s) 721
MvnI CGCG 3 cut(s) 323, 347, 542
MwoI GCNNNNNNNGC 8 cut(s) 32, 41, 161, 279, 441, 634, 701, 886
NaeI GCCGGC 2 cut(s) 766, 1065
NarI GGCGCC 1 cut(s) 444
NciI CCSGG 4 cut(s) 149, 546, 788, 871
NcoI CCATGG 1 cut(s) 213
NdeII GATC 6 cut(s) 193, 253, 324, 337, 585, 846
NgoMIV GCCGGC 2 cut(s) 764, 1063
NlaIII CATG 6 cut(s) 217, 626, 784, 958, 1072, 1110
NlaIV GGNNCC 2 cut(s) 100, 445
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 2 cut(s) 266, 524
NruI TCGCGA 1 cut(s) 323
NspI RCATGY 1 cut(s) 784
PcsI WCGNNNNNNNCGW 1 cut(s) 315
PdiI GCCGGC 2 cut(s) 766, 1065
PfeI GAWTC 2 cut(s) 968, 1093
PkrI GCNGC 6 cut(s) 37, 40, 43, 154, 275, 879
PleI GAGTC 1 cut(s) 500
PluTI GGCGCC 1 cut(s) 447
PmaCI CACGTG 1 cut(s) 748
PmlI CACGTG 1 cut(s) 748
PpsI GAGTC 1 cut(s) 500
Ppu21I YACGTR 1 cut(s) 748
PshBI ATTAAT 1 cut(s) 458
Psp6I CCWGG 1 cut(s) 719
PspCI CACGTG 1 cut(s) 748
PspGI CCWGG 1 cut(s) 719
PspN4I GGNNCC 2 cut(s) 100, 445
PspPI GGNCC 2 cut(s) 295, 694
PsuI RGATCY 1 cut(s) 846
PvuII CAGCTG 1 cut(s) 38
RigI GGCCGGCC 1 cut(s) 1067
RruI TCGCGA 1 cut(s) 323
RsaI GTAC 1 cut(s) 779
RsaNI GTAC 1 cut(s) 778
RseI CAYNNNNRTG 3 cut(s) 959, 980, 1085
SalI GTCGAC 2 cut(s) 173, 751
SaqAI TTAA 5 cut(s) 458, 501, 582, 851, 1008
SatI GCNGC 6 cut(s) 36, 39, 42, 153, 274, 878
Sau3AI GATC 6 cut(s) 193, 253, 324, 337, 585, 846
Sau96I GGNCC 2 cut(s) 295, 694
SchI GAGTC 1 cut(s) 500
ScrFI CCNGG 5 cut(s) 149, 546, 721, 788, 871
SduI GDGCHC 1 cut(s) 101
SfaNI GCATC 1 cut(s) 721
SfoI GGCGCC 1 cut(s) 445
SgrDI CGTCGACG 1 cut(s) 173
SmiMI CAYNNNNRTG 3 cut(s) 959, 980, 1085
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
Sse9I AATT 6 cut(s) 13, 365, 459, 758, 883, 1098
SspDI GGCGCC 1 cut(s) 443
SspMI CTAG 2 cut(s) 389, 927
StyD4I CCNGG 5 cut(s) 147, 544, 719, 786, 869
StyI CCWWGG 4 cut(s) 213, 352, 388, 477
TaaI ACNGT 6 cut(s) 64, 319, 524, 530, 561, 820
TaiI ACGT 2 cut(s) 750, 834
TaqI TCGA 7 cut(s) 174, 192, 336, 489, 752, 980, 1103
TaqII GACCGA 1 cut(s) 908
TasI AATT 6 cut(s) 13, 365, 459, 758, 883, 1098
TauI GCSGC 4 cut(s) 44, 155, 276, 880
TfiI GAWTC 2 cut(s) 968, 1093
Tru1I TTAA 5 cut(s) 458, 501, 582, 851, 1008
Tru9I TTAA 5 cut(s) 458, 501, 582, 851, 1008
TseFI GTSAC 2 cut(s) 266, 524
TseI GCWGC 2 cut(s) 35, 38
Tsp45I GTSAC 2 cut(s) 266, 524
TspDTI ATGAA 3 cut(s) 635, 1011, 1085
TspGWI ACGGA 2 cut(s) 186, 533
VspI ATTAAT 1 cut(s) 458
XagI CCTNNNNNAGG 1 cut(s) 92
XapI RAATTY 3 cut(s) 365, 883, 1098
XceI RCATGY 1 cut(s) 784
XmaJI CCTAGG 1 cut(s) 388
XmiI GTMKAC 4 cut(s) 81, 174, 288, 752
XspI CTAG 2 cut(s) 389, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.