Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0006148

Physical Location & Seq

Genomic Coordinates Reverse (-)

20845462 .. 20850765

Gene Structure 5304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1100500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGCGAACAGCGAAACCTCCGCCGATACTGCCCGGCCCTGGCAGTCCTACAACACCGTTTACACGAACGCCAAAGCCGCCATCGGAGATAGCCTAACCTTCCCTCCTCTTCTTCTTCCAACGCAAGCTTTTGGAGCCAAAAAATTTTTGGCCATGGCGAACAGCGAAACCTCCGCCGATACTGCCCGGCCCTGGCAGTCCTACAACACCGTTTACACGAACGCCAAAGCCGGCATGGAAGGCGTCGACAGGGAGAGAGTGCAGAGGATAGTGTACGAAATGAGCAAAGGATCGCAGTACTTCCAAAACGAGGAACGCAAAGAGGCCTTCATCAGGGAGAAGATAGAGAACATGCGAGCCCGATGCGCGAAGCTCAAACCAGCAGACCTGGATCACTTCCAAACGGTTGCTGATAAAAGAATTTTGGAGCTTGAAGCGACGCGGGACCTTTCGAGGATTTGGGTACATGTGGATATGGATGCTTTCTATGCGGCTGTCGAGACTTTGAGCAACCCGTCGTTGAAGGGGAAGCCCATGGCTGTTGGTGGCATGTCTATGATCTCCACTGCTAATTATGAGGCAAGGAAGTTTGGGGTTCGTGCTGCGATGCCTGGTTTCATTGCTCGTAAATTATGTCCCGACTTAATTTTTGTGCCTACGGATTTCGAGAAGTATAATCATTACAGTAGTTTAACTAGAAAAGTATATCAGAAGTATGATCCTAACTTCCTCGCTGCTAGTTTGGACGAAGCATATCTTGATGTAACTGAGGTTTGCAAAGAAAGGGGCACTACTGGTGAAGAAATTGCCAAAGAACTCAGAGCTGGTGTTTATGAAGTGACTGGTCTTACATGCAGTGCTGGAGTGGCACCAAACCGTCTACTTGCTAAGGTTTTCTCAGATATAAACAAGCCAAATGGACAGTTTGTTTTACCAAATAATCGGGTGGCTGTCATGACATTTATATCCTCTCTTCCTGTCCGAAAGATTGGGGGCATTGGTAAAGTAACTGAGCATATATTGAAGGATGCTCTTGGGATTAGTACATGTGAGGAGATTCTGCAAAAGAGCAGTTTAATTTGTGCGCTATTTTCTCGATCTGCAGCAGATTTTTTCCTCTCAGTGGGACTTGCCATTGGGGGAACAGATACTCCTGAAGCAAGATTGAGAAAAAGTATAAGTAATGAGAGATCATTTTCAGCCACAGGGGATGAAGCATATATTTATCGTAAATTGGCGGATATTGCAGAGATGCTATCTACTGATTTGCAAAAGGAGGGTCTTTGTGGGCGAACATTGACTCTAAAACTAAAGACAGCATCGTTTGAGGTTCGCACCAGAGCTGTGACTTCGCAAAAATATATATGCTCAACTGAGGATATTTTGAAGCATGCTTCAAAGTTGCTTAAGGCTGAACTTCCTATTTCTTTGAGGCTGATAGGCTTGCGGGTGTCTCACTTTGATGAAGAAAGGGTTGGTGCTCCATCTGATCCCACACAAAGAACTCTCACGGATTATATTTTATCAGGAAATGTTTTAAGGAAAAATGTGGGGAATCAGAGCTCCTTGGAAATGGATACTAATGGTTGCTGCATGATGCATGGTGAAGAACCCTGTTTATTTGAAGATGGCCATCAAACTTCTCGAGATTCTCTTGATGGAAACCACTTAGTAAATTTGGACGACAGTAAGTTTACTTTGGGAAATTTTGATGAAAAGGAAGAAGTTTATGAATCTACGAGCAGTGTAAATGCAGAAACGGTGTGTGTGGACATACAGAATGAGGACAACGTACAGGGTGGAGTGTCACCATTGTTGGCAGCAGGTCATTCTTTTTCTGGGCAGTTTGAGGGCAGTACCCTAGACAGAGTGAATAATGTAACTAACAACCGTGAGGACGTTGCAAGTTGTTCGGTCAGTCAGAAAGAGTTACTTTTGTGGTTGAATGACTACAAGTGTTCGATATGTGGGATAGAAGTGCCAGCTAGCTTCGTTGAGGAAAGGCAAGAGCACTTTGATTTTCATCTTGCTGAGAAACTTCAGAAAGAAGAATCTGGCGCTGACTCAACATGTATGCTGAGGCAGAGGTATGTTACACTTTCATTTGCTGCTATTATTTTCTCATACCCATCAGCTACGAATCTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019985 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03460 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

IMS IMS_C IMS_HHH

Protein Analysis

717

Amino Acids

79.35

Weight (kDa)

5.55

Isoelectric Point (pI)

31.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	157 - 301	4.3e-49	impB/mucB/samB family
IMS_C	PF11799	390 - 490	1.9e-20	impB/mucB/samB family C-terminal domain
zf_UBZ	PF18439	650 - 683	2.5e-07	Ubiquitin-Binding Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980
fragaria_vesca	FvH4_2g04350
malus_domestica	MD05G1100500.v1.1
prunus_persica	Prupe.8G144900_v2.0.a1 Prupe.8G144900_v2.0.a1
pyrus_communis	pycom05g09900
rosa_chinensis	RchiOBHm_Chr6g0253811
rosa_laevigata	RLG00000014968
rosa_multiflora	Rmu_sc0006323.1_g000020
rosa_roxburghii	Rroxscaffold_7G00211500
rosa_rugosa	Rorug05G0547400 Rorug05G0547500 Rorug05G0547600
rosa_samantha	Rh6AG063000 Rh6BG056300 Rh6CG056400 Rh6DG054200
rosa_wichuraiana	Rw6G005610 Rw6G005620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1814
AccB1I	GGYRCC	1 cut(s)	868
AccI	GTMKAC	2 cut(s)	246, 880
AccII	CGCG	2 cut(s)	368, 442
AciI	CCGC	7 cut(s)	21, 78, 174, 442, 491, 1238, 1447
AclWI	GGATC	4 cut(s)	298, 399, 713, 1484
AcoI	YGGCCR	2 cut(s)	150, 1630
AcsI	RAATTY	4 cut(s)	143, 420, 1675, 1705
AcuI	CTGAAG	2 cut(s)	1176, 2024
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	6 cut(s)	275, 299, 465, 1045, 1794, 1858
AfiI	CCNNNNNNNGG	5 cut(s)	39, 192, 310, 333, 1123
AflII	CTTAAG	1 cut(s)	1406
AflIII	ACRYGT	3 cut(s)	466, 1046, 2069
AgsI	TTSAA	7 cut(s)	434, 523, 1024, 1387, 1398, 1625, 1945
AjnI	CCWGG	4 cut(s)	38, 191, 387, 610
AjuI	GAANNNNNNNTTGG	2 cut(s)	1458, 1490
AloI	GAACNNNNNNTCC	2 cut(s)	1135, 1167
AluBI	AGCT	9 cut(s)	128, 373, 430, 824, 1343, 1563, 1985, 1989, 2135
AluI	AGCT	9 cut(s)	128, 373, 430, 824, 1343, 1563, 1985, 1989, 2135
Alw21I	GWGCWC	3 cut(s)	1483, 1565, 2013
Alw26I	GTCTC	2 cut(s)	494, 1458
AlwI	GGATC	4 cut(s)	298, 399, 713, 1484
Ama87I	CYCGRG	1 cut(s)	1644
AoxI	GGCC	5 cut(s)	35, 150, 188, 324, 1630
ApeKI	GCWGC	6 cut(s)	602, 734, 1103, 1590, 1820, 2108
ApoI	RAATTY	4 cut(s)	143, 420, 1675, 1705
ArsI	GACNNNNNNTTYG	4 cut(s)	632, 664, 1264, 1296
AspLEI	GCGC	3 cut(s)	368, 1087, 2060
AspS9I	GGNCC	3 cut(s)	36, 189, 445
AsuC2I	CCSGG	2 cut(s)	34, 187
AsuHPI	GGTGA	3 cut(s)	809, 1616, 1800
AsuNHI	GCTAGC	1 cut(s)	1985
AvaI	CYCGRG	1 cut(s)	1644
AvaII	GGWCC	1 cut(s)	445
BaeGI	GKGCMC	1 cut(s)	791
BalI	TGGCCA	2 cut(s)	152, 1632
BanI	GGYRCC	1 cut(s)	868
BanII	GRGCYC	2 cut(s)	361, 1565
Bbv12I	GWGCWC	3 cut(s)	1483, 1565, 2013
BbvCI	CCTCAGC	1 cut(s)	2078
BbvI	GCAGC	6 cut(s)	589, 721, 1115, 1577, 1832, 2095
BccI	CCATC	6 cut(s)	89, 1492, 1622, 1641, 1652, 2137
BcgI	CGANNNNNNTGC	4 cut(s)	345, 379, 1893, 1927
BciT130I	CCWGG	4 cut(s)	40, 193, 389, 612
BciVI	GTATCC	1 cut(s)	1570
BcnI	CCSGG	2 cut(s)	34, 187
BcoDI	GTCTC	2 cut(s)	494, 1458
BfaI	CTAG	4 cut(s)	696, 738, 1862, 1986
BfmI	CTRYAG	1 cut(s)	1101
BfoI	RGCGCY	1 cut(s)	2061
BfrI	CTTAAG	1 cut(s)	1406
BfuAI	ACCTGC	1 cut(s)	1814
BfuI	GTATCC	1 cut(s)	1570
BisI	GCNGC	8 cut(s)	78, 492, 603, 735, 1104, 1591, 1821, 2109
BlsI	GCNGC	8 cut(s)	79, 493, 604, 736, 1105, 1592, 1822, 2110
BmcAI	AGTACT	1 cut(s)	299
Bme1390I	CCNGG	6 cut(s)	34, 40, 187, 193, 389, 612
Bme18I	GGWCC	1 cut(s)	445
BmeT110I	CYCGRG	1 cut(s)	1644
BmgT120I	GGNCC	3 cut(s)	36, 189, 445
BmiI	GGNNCC	3 cut(s)	136, 446, 870
BmrFI	CCNGG	6 cut(s)	34, 40, 187, 193, 389, 612
BmsI	GCATC	7 cut(s)	353, 469, 597, 1018, 1242, 1328, 1587
BmtI	GCTAGC	1 cut(s)	1989
BpmI	CTGGAG	1 cut(s)	882
Bpu10I	CCTNAGC	2 cut(s)	888, 2078
BpuMI	CCSGG	2 cut(s)	34, 187
BsaBI	GATNNNNATC	2 cut(s)	1632, 2022
BsaHI	GRCGYC	1 cut(s)	243
BsaJI	CCNNGG	5 cut(s)	38, 153, 191, 534, 1566
BsaXI	ACNNNNNCTCC	4 cut(s)	88, 118, 1135, 1165
Bsc4I	CCNNNNNNNGG	5 cut(s)	39, 192, 310, 333, 1123
Bse118I	RCCGGY	1 cut(s)	230
Bse1I	ACTGG	2 cut(s)	799, 847
Bse3DI	GCAATG	1 cut(s)	618
Bse8I	GATNNNNATC	2 cut(s)	1632, 2022
BseBI	CCWGG	4 cut(s)	40, 193, 389, 612
BseDI	CCNNGG	5 cut(s)	38, 153, 191, 534, 1566
BseGI	GGATG	3 cut(s)	484, 1033, 1216
BseJI	GATNNNNATC	2 cut(s)	1632, 2022
BseLI	CCNNNNNNNGG	5 cut(s)	39, 192, 310, 333, 1123
BseMI	GCAATG	1 cut(s)	618
BseMII	CTCAG	8 cut(s)	759, 832, 912, 1002, 1134, 1365, 2022, 2069
BseNI	ACTGG	2 cut(s)	799, 847
BseRI	GAGGAG	2 cut(s)	96, 1067
BseSI	GKGCMC	1 cut(s)	791
BseXI	GCAGC	6 cut(s)	589, 721, 1115, 1577, 1832, 2095
BsgI	GTGCAG	1 cut(s)	281
Bsh1236I	CGCG	2 cut(s)	368, 442
BshFI	GGCC	5 cut(s)	37, 152, 190, 326, 1632
BshNI	GGYRCC	1 cut(s)	868
BsiHKAI	GWGCWC	3 cut(s)	1483, 1565, 2013
BsiHKCI	CYCGRG	1 cut(s)	1644
BsiSI	CCGG	3 cut(s)	34, 187, 231
BslFI	GGGAC	3 cut(s)	458, 621, 1140
BslI	CCNNNNNNNGG	5 cut(s)	39, 192, 310, 333, 1123
BsmAI	GTCTC	2 cut(s)	494, 1458
BsmFI	GGGAC	3 cut(s)	458, 621, 1140
BsnI	GGCC	5 cut(s)	37, 152, 190, 326, 1632
BsoBI	CYCGRG	1 cut(s)	1644
Bsp1286I	GDGCHC	5 cut(s)	361, 791, 1483, 1565, 2013
Bsp143I	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
Bsp19I	CCATGG	2 cut(s)	153, 534
BspACI	CCGC	7 cut(s)	21, 78, 174, 442, 491, 1238, 1447
BspANI	GGCC	5 cut(s)	37, 152, 190, 326, 1632
BspCNI	CTCAG	8 cut(s)	760, 831, 911, 1003, 1133, 1366, 2023, 2070
BspFNI	CGCG	2 cut(s)	368, 442
BspHI	TCATGA	1 cut(s)	954
BspLI	GGNNCC	3 cut(s)	136, 446, 870
BspMAI	CTGCAG	1 cut(s)	1105
BspMI	ACCTGC	1 cut(s)	1814
BspOI	GCTAGC	1 cut(s)	1989
BspPI	GGATC	4 cut(s)	298, 399, 713, 1484
BspT107I	GGYRCC	1 cut(s)	868
BspTI	CTTAAG	1 cut(s)	1406
BsrDI	GCAATG	1 cut(s)	618
BsrFI	RCCGGY	1 cut(s)	230
BsrI	ACTGG	2 cut(s)	799, 847
BssAI	RCCGGY	1 cut(s)	230
BssECI	CCNNGG	5 cut(s)	38, 153, 191, 534, 1566
BssMI	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
BssNI	GRCGYC	1 cut(s)	243
BssT1I	CCWWGG	3 cut(s)	153, 534, 1566
Bst2UI	CCWGG	4 cut(s)	40, 193, 389, 612
Bst4CI	ACNGT	9 cut(s)	58, 211, 406, 686, 878, 924, 1688, 1762, 1892
Bst6I	CTCTTC	2 cut(s)	114, 978
BstACI	GRCGYC	1 cut(s)	243
BstAFI	CTTAAG	1 cut(s)	1406
BstC8I	GCNNGC	7 cut(s)	126, 232, 357, 1392, 1445, 1983, 1987
BstDSI	CCRYGG	2 cut(s)	153, 534
BstENI	CCTNNNNNAGG	1 cut(s)	331
BstF5I	GGATG	3 cut(s)	484, 1033, 1216
BstFNI	CGCG	2 cut(s)	368, 442
BstH2I	RGCGCY	1 cut(s)	2061
BstHHI	GCGC	3 cut(s)	368, 1087, 2060
BstKTI	GATC	7 cut(s)	293, 394, 561, 721, 1100, 1193, 1492
BstMAI	GTCTC	2 cut(s)	494, 1458
BstMBI	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 77, 134, 182, 240, 365, 488, 866, 1244
BstNI	CCWGG	4 cut(s)	40, 193, 389, 612
BstNSI	RCATGY	7 cut(s)	355, 470, 553, 855, 1050, 1394, 2073
BstSCI	CCNGG	6 cut(s)	32, 38, 185, 191, 387, 610
BstSFI	CTRYAG	1 cut(s)	1101
BstSLI	GKGCMC	1 cut(s)	791
BstUI	CGCG	2 cut(s)	368, 442
BstV1I	GCAGC	6 cut(s)	589, 721, 1115, 1577, 1832, 2095
BsuI	GTATCC	1 cut(s)	1570
BsuRI	GGCC	5 cut(s)	37, 152, 190, 326, 1632
BtgI	CCRYGG	2 cut(s)	153, 534
BtgZI	GCGATG	1 cut(s)	620
BtsCI	GGATG	3 cut(s)	484, 1033, 1216
BtsI	GCAGTG	3 cut(s)	564, 862, 1750
BtsIMutI	CAGTG	4 cut(s)	564, 862, 1128, 1750
BveI	ACCTGC	1 cut(s)	1814
Cac8I	GCNNGC	7 cut(s)	126, 232, 357, 1392, 1445, 1983, 1987
CciI	TCATGA	1 cut(s)	954
CfoI	GCGC	3 cut(s)	368, 1087, 2060
Cfr10I	RCCGGY	1 cut(s)	230
Cfr13I	GGNCC	3 cut(s)	36, 189, 445
CseI	GACGC	2 cut(s)	232, 448
Csp6I	GTAC	6 cut(s)	274, 298, 464, 1044, 1793, 1857
CviQI	GTAC	6 cut(s)	274, 298, 464, 1044, 1793, 1857
DpnI	GATC	7 cut(s)	292, 393, 560, 720, 1099, 1192, 1491
DpnII	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
EaeI	YGGCCR	2 cut(s)	150, 1630
Eam1104I	CTCTTC	2 cut(s)	114, 978
EarI	CTCTTC	2 cut(s)	114, 978
EciI	GGCGGA	3 cut(s)	10, 163, 1253
Ecl136II	GAGCTC	1 cut(s)	1563
Eco130I	CCWWGG	3 cut(s)	153, 534, 1566
Eco147I	AGGCCT	1 cut(s)	326
Eco24I	GRGCYC	2 cut(s)	361, 1565
Eco47I	GGWCC	1 cut(s)	445
Eco53kI	GAGCTC	1 cut(s)	1563
Eco57I	CTGAAG	2 cut(s)	1176, 2024
Eco88I	CYCGRG	1 cut(s)	1644
EcoICRI	GAGCTC	1 cut(s)	1563
EcoNI	CCTNNNNNAGG	1 cut(s)	331
EcoO109I	RGGNCCY	1 cut(s)	445
EcoRII	CCWGG	4 cut(s)	38, 191, 387, 610
EcoT14I	CCWWGG	3 cut(s)	153, 534, 1566
EcoT22I	ATGCAT	1 cut(s)	1602
EcoT38I	GRGCYC	2 cut(s)	361, 1565
ErhI	CCWWGG	3 cut(s)	153, 534, 1566
FalI	AAGNNNNNCTT	4 cut(s)	741, 773, 1917, 1949
FaqI	GGGAC	3 cut(s)	458, 621, 1140
FauI	CCCGC	2 cut(s)	435, 1440
FblI	GTMKAC	2 cut(s)	246, 880
Fnu4HI	GCNGC	8 cut(s)	78, 492, 603, 735, 1104, 1591, 1821, 2109
FokI	GGATG	3 cut(s)	491, 1040, 1223
FriOI	GRGCYC	2 cut(s)	361, 1565
Fsp4HI	GCNGC	8 cut(s)	78, 492, 603, 735, 1104, 1591, 1821, 2109
FspBI	CTAG	4 cut(s)	696, 738, 1862, 1986
GlaI	GCGC	3 cut(s)	367, 1086, 2059
GluI	GCNGC	8 cut(s)	78, 492, 603, 735, 1104, 1591, 1821, 2109
GsuI	CTGGAG	1 cut(s)	882
HaeII	RGCGCY	1 cut(s)	2061
HaeIII	GGCC	5 cut(s)	37, 152, 190, 326, 1632
HapII	CCGG	3 cut(s)	34, 187, 231
HgaI	GACGC	2 cut(s)	232, 448
HhaI	GCGC	3 cut(s)	368, 1087, 2060
Hin1I	GRCGYC	1 cut(s)	243
Hin6I	GCGC	3 cut(s)	366, 1085, 2058
HinP1I	GCGC	3 cut(s)	366, 1085, 2058
HincII	GTYRAC	1 cut(s)	247
HindII	GTYRAC	1 cut(s)	247
HindIII	AAGCTT	1 cut(s)	126
HinfI	GANTC	8 cut(s)	1057, 1300, 1555, 1649, 1733, 2051, 2063, 2140
HpaII	CCGG	3 cut(s)	34, 187, 231
HphI	GGTGA	3 cut(s)	809, 1616, 1800
Hpy166II	GTNNAC	7 cut(s)	61, 214, 247, 274, 881, 1695, 1771
Hpy188I	TCNGA	9 cut(s)	86, 711, 821, 901, 983, 1489, 1560, 1923, 2043
Hpy8I	GTNNAC	7 cut(s)	61, 214, 247, 274, 881, 1695, 1771
Hpy99I	CGWCG	3 cut(s)	248, 442, 520
HpyAV	CCTTC	5 cut(s)	109, 233, 337, 517, 1018
HpyCH4III	ACNGT	9 cut(s)	58, 211, 406, 686, 878, 924, 1688, 1762, 1892
HpyCH4IV	ACGT	2 cut(s)	1791, 1899
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 77, 134, 182, 240, 365, 488, 866, 1244
HpySE526I	ACGT	2 cut(s)	1791, 1899
Hsp92I	GRCGYC	1 cut(s)	243
HspAI	GCGC	3 cut(s)	366, 1085, 2058
KroI	GCCGGC	1 cut(s)	230
KroNI	GCCGGC	1 cut(s)	232
Kzo9I	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
LmnI	GCTCC	4 cut(s)	134, 427, 1486, 1568
Lsp1109I	GCAGC	6 cut(s)	589, 721, 1115, 1577, 1832, 2095
LweI	GCATC	7 cut(s)	353, 469, 597, 1018, 1242, 1328, 1587
MaeI	CTAG	4 cut(s)	696, 738, 1862, 1986
MaeII	ACGT	2 cut(s)	1791, 1899
MaeIII	GTNAC	8 cut(s)	763, 838, 1006, 1345, 1806, 1879, 1929, 2092
MalI	GATC	7 cut(s)	292, 393, 560, 720, 1099, 1192, 1491
MboI	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
MhlI	GDGCHC	5 cut(s)	361, 791, 1483, 1565, 2013
MlsI	TGGCCA	2 cut(s)	152, 1632
MluNI	TGGCCA	2 cut(s)	152, 1632
MlyI	GAGTC	2 cut(s)	1294, 2057
MmeI	TCCRAC	1 cut(s)	143
Mox20I	TGGCCA	2 cut(s)	152, 1632
Mph1103I	ATGCAT	1 cut(s)	1602
MroNI	GCCGGC	1 cut(s)	230
MscI	TGGCCA	2 cut(s)	152, 1632
MseI	TTAA	5 cut(s)	644, 692, 1076, 1407, 1538
MslI	CAYNNNNRTG	2 cut(s)	554, 1461
Msp20I	TGGCCA	2 cut(s)	152, 1632
MspCI	CTTAAG	1 cut(s)	1406
MspI	CCGG	3 cut(s)	34, 187, 231
MspR9I	CCNGG	6 cut(s)	34, 40, 187, 193, 389, 612
MvaI	CCWGG	4 cut(s)	40, 193, 389, 612
MvnI	CGCG	2 cut(s)	368, 442
MwoI	GCNNNNNNNGC	9 cut(s)	29, 77, 134, 182, 240, 365, 488, 866, 1244
NaeI	GCCGGC	1 cut(s)	232
NciI	CCSGG	2 cut(s)	34, 187
NcoI	CCATGG	2 cut(s)	153, 534
NdeII	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
NgoMIV	GCCGGC	1 cut(s)	230
NheI	GCTAGC	1 cut(s)	1985
NlaIV	GGNNCC	3 cut(s)	136, 446, 870
NmuCI	GTSAC	3 cut(s)	838, 1345, 1806
NsiI	ATGCAT	1 cut(s)	1602
NspI	RCATGY	7 cut(s)	355, 470, 553, 855, 1050, 1394, 2073
PaeI	GCATGC	1 cut(s)	1394
PaeR7I	CTCGAG	1 cut(s)	1644
PagI	TCATGA	1 cut(s)	954
PceI	AGGCCT	1 cut(s)	326
PciI	ACATGT	3 cut(s)	466, 1046, 2069
PdiI	GCCGGC	1 cut(s)	232
PfeI	GAWTC	6 cut(s)	1057, 1555, 1649, 1733, 2051, 2140
PkrI	GCNGC	8 cut(s)	79, 493, 604, 736, 1105, 1592, 1822, 2110
PleI	GAGTC	2 cut(s)	1294, 2057
PpsI	GAGTC	2 cut(s)	1294, 2057
PpuMI	RGGWCCY	1 cut(s)	445
PscI	ACATGT	3 cut(s)	466, 1046, 2069
Psp124BI	GAGCTC	1 cut(s)	1565
Psp5II	RGGWCCY	1 cut(s)	445
Psp6I	CCWGG	4 cut(s)	38, 191, 387, 610
PspGI	CCWGG	4 cut(s)	38, 191, 387, 610
PspN4I	GGNNCC	3 cut(s)	136, 446, 870
PspPI	GGNCC	3 cut(s)	36, 189, 445
PspPPI	RGGWCCY	1 cut(s)	445
PstI	CTGCAG	1 cut(s)	1105
RsaI	GTAC	6 cut(s)	275, 299, 465, 1045, 1794, 1858
RsaNI	GTAC	6 cut(s)	274, 298, 464, 1044, 1793, 1857
RseI	CAYNNNNRTG	2 cut(s)	554, 1461
SacI	GAGCTC	1 cut(s)	1565
SalI	GTCGAC	1 cut(s)	245
SaqAI	TTAA	5 cut(s)	644, 692, 1076, 1407, 1538
SatI	GCNGC	8 cut(s)	78, 492, 603, 735, 1104, 1591, 1821, 2109
Sau3AI	GATC	7 cut(s)	290, 391, 558, 718, 1097, 1190, 1489
Sau96I	GGNCC	3 cut(s)	36, 189, 445
ScaI	AGTACT	1 cut(s)	299
SchI	GAGTC	2 cut(s)	1294, 2057
ScrFI	CCNGG	6 cut(s)	34, 40, 187, 193, 389, 612
SduI	GDGCHC	5 cut(s)	361, 791, 1483, 1565, 2013
SfaNI	GCATC	7 cut(s)	353, 469, 597, 1018, 1242, 1328, 1587
SfcI	CTRYAG	1 cut(s)	1101
Sfr274I	CTCGAG	1 cut(s)	1644
SinI	GGWCC	1 cut(s)	445
SlaI	CTCGAG	1 cut(s)	1644
SmiMI	CAYNNNNRTG	2 cut(s)	554, 1461
SmlI	CTYRAG	2 cut(s)	1406, 1644
SmoI	CTYRAG	2 cut(s)	1406, 1644
SphI	GCATGC	1 cut(s)	1394
SseBI	AGGCCT	1 cut(s)	326
SsiI	CCGC	7 cut(s)	21, 78, 174, 442, 491, 1238, 1447
SspMI	CTAG	4 cut(s)	696, 738, 1862, 1986
SstI	GAGCTC	1 cut(s)	1565
StuI	AGGCCT	1 cut(s)	326
StyD4I	CCNGG	6 cut(s)	32, 38, 185, 191, 387, 610
StyI	CCWWGG	3 cut(s)	153, 534, 1566
TaaI	ACNGT	9 cut(s)	58, 211, 406, 686, 878, 924, 1688, 1762, 1892
TaiI	ACGT	2 cut(s)	1794, 1902
TaqI	TCGA	7 cut(s)	246, 452, 498, 666, 1096, 1645, 1961
TaqII	GACCGA	1 cut(s)	1903
TatI	WGTACW	2 cut(s)	297, 1043
TauI	GCSGC	2 cut(s)	80, 494
TfiI	GAWTC	6 cut(s)	1057, 1555, 1649, 1733, 2051, 2140
Tru1I	TTAA	5 cut(s)	644, 692, 1076, 1407, 1538
Tru9I	TTAA	5 cut(s)	644, 692, 1076, 1407, 1538
TscAI	CASTG	4 cut(s)	571, 862, 1128, 1750
TseFI	GTSAC	3 cut(s)	838, 1345, 1806
TseI	GCWGC	6 cut(s)	602, 734, 1103, 1590, 1820, 2108
Tsp45I	GTSAC	3 cut(s)	838, 1345, 1806
TspDTI	ATGAA	9 cut(s)	319, 607, 849, 1227, 1479, 1728, 1746, 2012, 2091
TspGWI	ACGGA	2 cut(s)	674, 1526
TspRI	CASTG	4 cut(s)	571, 862, 1128, 1750
Vha464I	CTTAAG	1 cut(s)	1406
VpaK11BI	GGWCC	1 cut(s)	445
XagI	CCTNNNNNAGG	1 cut(s)	331
XapI	RAATTY	4 cut(s)	143, 420, 1675, 1705
XceI	RCATGY	7 cut(s)	355, 470, 553, 855, 1050, 1394, 2073
XcmI	CCANNNNNNNNNTGG	2 cut(s)	145, 232
XhoI	CTCGAG	1 cut(s)	1644
XmiI	GTMKAC	2 cut(s)	246, 880
XspI	CTAG	4 cut(s)	696, 738, 1862, 1986
ZrmI	AGTACT	1 cut(s)	299
Zsp2I	ATGCAT	1 cut(s)	1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.