Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006148

Physical Location & Seq

Genomic Coordinates Reverse (-)

9345121 .. 9349924

Gene Structure 4804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG063000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGCCAATTCAGAAACCGCCGGCGACGCCGCTCGGCCGTGGCAGTCCTACACCACCGTCTACACCAATGCCAAAGCCGGTATGGAAGGCGTGGATAAAGAGAAGGTTCAGAGAGTAGTGTATGAGATGAGTAAAGGGTCGGAGTATTTTAAGAACGAGGAGCGCAAGGAGGCTTTGATTAAGGAGAAGATAGAGAACATGCGTGCTCGGTGTGCAAAGCTCACCGCCGCAGATTTGGCTCACTATCAGAAGGTTGCTGATAAGAGAGTTGTGGAGTTAGAAGCAATGCGTGACCTGTCGAGGGTTTGGATACATGTGGATATGGATGCTTTCTATGCAGCTGTTGAGACTTTAAGTGAGCCGTCGTTGAAGGGAAAGCCCATGGCTGTTGGTGGTATGTCTATGATCTCAACTGCTAATTATGAGGCAAGGAGATTTGGGGTTCGAGCTGCAATGCCTGGCTTCATTGCTCGTAAATTATGTCCGGAGTTAGTTTTTGTTCCAACAGATTTCAAGAAGTACACTTATTACAGTGATTTAACTAGAAAAGATCCTAACTTCCTGGCTGCTAGTTTAGACGAAGCGTACCTTGATGTTACTGAGGTTTGCAAAGAAAAGGGCACTACTGGGGAAGAAATTGCCAAAGAACTCAGAGATGGTGTTAATGAAGAGACTGGTCTAACATGTAGCGCTGGAGTAGCACCAAACCGTCTACTTGCTAAGGTTTGTTCAGATATAAACAAGCCGAATGGACAGTTTATTTTACCAAGCAATCGAATGGCTGTGATGACATTTATATCCTCACTTCCTGTACGAAAGATTGGGGGGATTGGAAAAGTCACCGAACATATTTTAAGGGATGCTCTTGGAATTAGTACTTGCGAGGAGATTCTGCAAAAGAGCAGTTATATCTGTGCACTATTTTCTCATTCTACGGCAGATTTTTTCCTCTCTGTGGGACTTGCCATCGGGAGGACAGGTACTCCTGAAGTCAGATTGAGGAAAAGTATAAGTAACGAGAGGACATTTTCAGCCACAGGGGATGAAACATTTCTCTATTGTAAATTAGCTGAGATCGCAGAGATGCTATCTACTGACTTGCAAAAGGAGGGCCTTTTTGGGCGTACATTGACTCTTAAACTCAAAACCGCATCTTTTGAGGTTCGCACCAGAGCTGTGACTTCTCAAAAATATGTATGCTCGACTAAGGATATATTGAAGCATGCTTCCAAGTTGCTTAAAGCTGAACTTCCTGTTTCTATAAGGCTGATAGGTTTGCGGGTGTCTCATTTTGATGAAGAAAAGGGTGGTCCATCAGATCCCACACAAAAATCTCTCACCGACTATCTTTTATCAGGAGATGCTTCAAGGAAAACTATGGGTGATCAAATCTCCTTGGACTCGGACAATATTGATCATCGCTTCATACACGGTGAAGAATGCTGTTTATTTATAGAAACCCATGAAACATATCCATGTGATCATGGAGATTCTTTAGATGGCAATGCTTGTTCAAATGCTGATGACCGTAAGTCTATTTTGGTCAACACTTCTGAAGAAAAGGAAAAACATGATGAATCCAGGGGTAATGCAAGTGCTGAAAAGATGAATTCAAATGACATACAGACTGGGGAAAATGTACAAAACAGAGTTTCACCATTGTTGAGAGTAGGTTATTCTTTTCATGGGAACTCCGAGGGCAGTAGCATAGAAAGAGCAAATAGTGCAACTAGCAGTCTTCAGGATTTTCCAATTCCTTCATCTCATCAGGAAGAGTTGCTTTTGTGGGTGGATGACTACAAGTGCTCGATATGTGGAATAGAAGTGCCACCAGATTTTGTTGAAGAACGGCAAGAACACTTTGATTTTCATCTTGCCGAGAAGCTTCAAAACGATGAATCTGGCATTAACCTAAGAACTTCCATGCCAAAGCAGAGAACTGTAAACAAGAATCACGATTTGAGCAGAAGGAAACACAAAAAGCATAAATCATCTCCAAAAGAAAGCAAACACATACCTATTGATGTGTTCTTTGTTAAGAGCAGTCAGAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019985 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03460 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

IMS IMS_C IMS_HHH

Protein Analysis

685

Amino Acids

76.47

Weight (kDa)

6.22

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	106 - 245	5.1e-44	impB/mucB/samB family
IMS_C	PF11799	334 - 435	1.5e-19	impB/mucB/samB family C-terminal domain
zf_UBZ	PF18439	598 - 631	3.3e-07	Ubiquitin-Binding Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980
fragaria_vesca	FvH4_2g04350
malus_domestica	MD05G1100500.v1.1
prunus_persica	Prupe.8G144900_v2.0.a1 Prupe.8G144900_v2.0.a1
pyrus_communis	pycom05g09900
rosa_chinensis	RchiOBHm_Chr6g0253811
rosa_laevigata	RLG00000014968
rosa_multiflora	Rmu_sc0006323.1_g000020
rosa_roxburghii	Rroxscaffold_7G00211500
rosa_rugosa	Rorug05G0547400 Rorug05G0547500 Rorug05G0547600
rosa_samantha	Rh6AG063000 Rh6BG056300 Rh6CG056400 Rh6DG054200
rosa_wichuraiana	Rw6G005610 Rw6G005620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	2 cut(s)	60, 712
AccIII	TCCGGA	1 cut(s)	484
AciI	CCGC	6 cut(s)	18, 30, 225, 228, 1149, 1279
AclWI	GGATC	2 cut(s)	545, 1313
AcoI	YGGCCR	2 cut(s)	3, 35
AcsI	RAATTY	1 cut(s)	1609
AcuI	CTGAAG	3 cut(s)	1008, 1575, 1724
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	7 cut(s)	521, 587, 813, 877, 982, 1126, 1641
AfeI	AGCGCT	1 cut(s)	691
AfiI	CCNNNNNNNGG	3 cut(s)	301, 955, 972
AflIII	ACRYGT	2 cut(s)	313, 683
AgsI	TTSAA	8 cut(s)	370, 514, 1219, 1368, 1515, 1614, 1844, 1889
AhdI	GACNNNNNGTC	1 cut(s)	1531
AjnI	CCWGG	3 cut(s)	457, 561, 1580
AluBI	AGCT	7 cut(s)	220, 341, 449, 1070, 1175, 1244, 1885
AluI	AGCT	7 cut(s)	220, 341, 449, 1070, 1175, 1244, 1885
Alw21I	GWGCWC	3 cut(s)	208, 919, 1808
Alw26I	GTCTC	3 cut(s)	341, 665, 1290
Alw44I	GTGCAC	1 cut(s)	915
AlwI	GGATC	2 cut(s)	545, 1313
Aor13HI	TCCGGA	1 cut(s)	484
Aor51HI	AGCGCT	1 cut(s)	691
AoxI	GGCC	3 cut(s)	3, 35, 1111
ApaLI	GTGCAC	1 cut(s)	915
ApeKI	GCWGC	3 cut(s)	338, 449, 566
ApoI	RAATTY	1 cut(s)	1609
Asp700I	GAANNNNTTC	1 cut(s)	1050
AspLEI	GCGC	2 cut(s)	165, 692
AspS9I	GGNCC	2 cut(s)	1111, 1310
AsuHPI	GGTGA	6 cut(s)	214, 832, 1330, 1394, 1445, 1647
AvaII	GGWCC	1 cut(s)	1310
BaeGI	GKGCMC	2 cut(s)	623, 919
BalI	TGGCCA	1 cut(s)	5
BbsI	GAAGAC	1 cut(s)	1730
Bbv12I	GWGCWC	3 cut(s)	208, 919, 1808
BbvI	GCAGC	3 cut(s)	350, 436, 553
BccI	CCATC	4 cut(s)	650, 974, 1321, 1493
BceAI	ACGGC	4 cut(s)	22, 346, 951, 1865
BciT130I	CCWGG	3 cut(s)	459, 563, 1582
BciVI	GTATCC	1 cut(s)	303
BclI	TGATCA	3 cut(s)	1384, 1414, 1480
BcoDI	GTCTC	3 cut(s)	341, 665, 1290
BfaI	CTAG	3 cut(s)	543, 570, 1731
BfoI	RGCGCY	1 cut(s)	693
BfuI	GTATCC	1 cut(s)	303
BisI	GCNGC	5 cut(s)	30, 228, 339, 450, 567
BlsI	GCNGC	5 cut(s)	31, 229, 340, 451, 568
BmcAI	AGTACT	1 cut(s)	877
Bme1390I	CCNGG	3 cut(s)	459, 563, 1582
Bme18I	GGWCC	1 cut(s)	1310
BmeRI	GACNNNNNGTC	1 cut(s)	1531
BmgT120I	GGNCC	2 cut(s)	1111, 1310
BmrFI	CCNGG	3 cut(s)	459, 563, 1582
BmrI	ACTGGG	2 cut(s)	636, 1638
BmsI	GCATC	5 cut(s)	316, 850, 1074, 1160, 1351
BmuI	ACTGGG	2 cut(s)	636, 1638
BpiI	GAAGAC	1 cut(s)	1730
BpmI	CTGGAG	1 cut(s)	714
Bpu10I	CCTNAGC	1 cut(s)	720
BsaBI	GATNNNNATC	1 cut(s)	1869
BsaHI	GRCGYC	1 cut(s)	27
BsaJI	CCNNGG	5 cut(s)	38, 381, 1395, 1581, 1695
BsaWI	WCCGGW	1 cut(s)	484
BsaXI	ACNNNNNCTCC	4 cut(s)	964, 967, 994, 997
Bsc4I	CCNNNNNNNGG	3 cut(s)	301, 955, 972
Bse118I	RCCGGY	2 cut(s)	20, 77
Bse1I	ACTGG	3 cut(s)	631, 679, 1633
Bse3DI	GCAATG	4 cut(s)	291, 459, 465, 1510
Bse8I	GATNNNNATC	1 cut(s)	1869
BseAI	TCCGGA	1 cut(s)	484
BseBI	CCWGG	3 cut(s)	459, 563, 1582
BseDI	CCNNGG	5 cut(s)	38, 381, 1395, 1581, 1695
BseGI	GGATG	4 cut(s)	331, 865, 1048, 1798
BseJI	GATNNNNATC	1 cut(s)	1869
BseLI	CCNNNNNNNGG	3 cut(s)	301, 955, 972
BseMI	GCAATG	4 cut(s)	291, 459, 465, 1510
BseMII	CTCAG	3 cut(s)	591, 664, 1062
BseNI	ACTGG	3 cut(s)	631, 679, 1633
BseRI	GAGGAG	2 cut(s)	173, 899
BseSI	GKGCMC	2 cut(s)	623, 919
BseX3I	CGGCCG	1 cut(s)	35
BseXI	GCAGC	3 cut(s)	350, 436, 553
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	3 cut(s)	5, 37, 1113
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	3 cut(s)	208, 919, 1808
BsiSI	CCGG	3 cut(s)	21, 78, 485
BslFI	GGGAC	1 cut(s)	972
BslI	CCNNNNNNNGG	3 cut(s)	301, 955, 972
BsmAI	GTCTC	3 cut(s)	341, 665, 1290
BsmFI	GGGAC	1 cut(s)	972
BsmI	GAATGC	1 cut(s)	1445
BsnI	GGCC	3 cut(s)	5, 37, 1113
Bsp1286I	GDGCHC	4 cut(s)	208, 623, 919, 1808
Bsp13I	TCCGGA	1 cut(s)	484
Bsp1407I	TGTACA	1 cut(s)	1639
Bsp143I	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
Bsp19I	CCATGG	1 cut(s)	381
BspACI	CCGC	6 cut(s)	18, 30, 225, 228, 1149, 1279
BspANI	GGCC	3 cut(s)	5, 37, 1113
BspCNI	CTCAG	3 cut(s)	592, 663, 1063
BspEI	TCCGGA	1 cut(s)	484
BspPI	GGATC	2 cut(s)	545, 1313
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	4 cut(s)	291, 459, 465, 1510
BsrFI	RCCGGY	2 cut(s)	20, 77
BsrGI	TGTACA	1 cut(s)	1639
BsrI	ACTGG	3 cut(s)	631, 679, 1633
BssAI	RCCGGY	2 cut(s)	20, 77
BssECI	CCNNGG	5 cut(s)	38, 381, 1395, 1581, 1695
BssMI	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	2 cut(s)	381, 1395
Bst2UI	CCWGG	3 cut(s)	459, 563, 1582
Bst4CI	ACNGT	7 cut(s)	58, 533, 710, 756, 1433, 1529, 1942
Bst6I	CTCTTC	2 cut(s)	663, 1767
BstACI	GRCGYC	1 cut(s)	27
BstAPI	GCANNNNNTGC	1 cut(s)	1724
BstAUI	TGTACA	1 cut(s)	1639
BstC8I	GCNNGC	3 cut(s)	22, 204, 1224
BstDEI	CTNAG	6 cut(s)	600, 650, 720, 1071, 1206, 1913
BstDSI	CCRYGG	2 cut(s)	38, 381
BstF5I	GGATG	4 cut(s)	331, 865, 1048, 1798
BstH2I	RGCGCY	1 cut(s)	693
BstHHI	GCGC	2 cut(s)	165, 692
BstKTI	GATC	7 cut(s)	408, 553, 1077, 1321, 1387, 1417, 1483
BstMAI	GTCTC	3 cut(s)	341, 665, 1290
BstMBI	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
BstMCI	CGRYCG	1 cut(s)	38
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 698, 1076, 1724
BstNI	CCWGG	3 cut(s)	459, 563, 1582
BstNSI	RCATGY	4 cut(s)	202, 317, 687, 1226
BstSCI	CCNGG	3 cut(s)	457, 561, 1580
BstSLI	GKGCMC	2 cut(s)	623, 919
BstV1I	GCAGC	3 cut(s)	350, 436, 553
BstV2I	GAAGAC	1 cut(s)	1730
BstX2I	RGATCY	2 cut(s)	550, 1318
BstYI	RGATCY	2 cut(s)	550, 1318
BstZI	CGGCCG	1 cut(s)	35
BsuI	GTATCC	1 cut(s)	303
BsuRI	GGCC	3 cut(s)	5, 37, 1113
BtgI	CCRYGG	2 cut(s)	38, 381
BtgZI	GCGATG	1 cut(s)	1403
BtsCI	GGATG	4 cut(s)	331, 865, 1048, 1798
BtsIMutI	CAGTG	1 cut(s)	538
Cac8I	GCNNGC	3 cut(s)	22, 204, 1224
CfoI	GCGC	2 cut(s)	165, 692
Cfr10I	RCCGGY	2 cut(s)	20, 77
Cfr13I	GGNCC	2 cut(s)	1111, 1310
CseI	GACGC	1 cut(s)	35
Csp6I	GTAC	7 cut(s)	520, 586, 812, 876, 981, 1125, 1640
CviQI	GTAC	7 cut(s)	520, 586, 812, 876, 981, 1125, 1640
DdeI	CTNAG	6 cut(s)	600, 650, 720, 1071, 1206, 1913
DpnI	GATC	7 cut(s)	407, 552, 1076, 1320, 1386, 1416, 1482
DpnII	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
DriI	GACNNNNNGTC	1 cut(s)	1531
EaeI	YGGCCR	2 cut(s)	3, 35
EagI	CGGCCG	1 cut(s)	35
Eam1104I	CTCTTC	2 cut(s)	663, 1767
Eam1105I	GACNNNNNGTC	1 cut(s)	1531
EarI	CTCTTC	2 cut(s)	663, 1767
EclXI	CGGCCG	1 cut(s)	35
Eco130I	CCWWGG	2 cut(s)	381, 1395
Eco47I	GGWCC	1 cut(s)	1310
Eco47III	AGCGCT	1 cut(s)	691
Eco52I	CGGCCG	1 cut(s)	35
Eco57I	CTGAAG	3 cut(s)	1008, 1575, 1724
EcoO109I	RGGNCCY	1 cut(s)	1111
EcoRI	GAATTC	1 cut(s)	1609
EcoRII	CCWGG	3 cut(s)	457, 561, 1580
EcoT14I	CCWWGG	2 cut(s)	381, 1395
ErhI	CCWWGG	2 cut(s)	381, 1395
FalI	AAGNNNNNCTT	6 cut(s)	573, 605, 1233, 1265, 1764, 1796
FaqI	GGGAC	1 cut(s)	972
FauI	CCCGC	1 cut(s)	1272
FbaI	TGATCA	3 cut(s)	1384, 1414, 1480
FblI	GTMKAC	2 cut(s)	60, 712
Fnu4HI	GCNGC	5 cut(s)	30, 228, 339, 450, 567
FokI	GGATG	4 cut(s)	338, 872, 1055, 1805
Fsp4HI	GCNGC	5 cut(s)	30, 228, 339, 450, 567
FspBI	CTAG	3 cut(s)	543, 570, 1731
GlaI	GCGC	2 cut(s)	164, 691
GluI	GCNGC	5 cut(s)	30, 228, 339, 450, 567
GsuI	CTGGAG	1 cut(s)	714
HaeII	RGCGCY	1 cut(s)	693
HaeIII	GGCC	3 cut(s)	5, 37, 1113
HapII	CCGG	3 cut(s)	21, 78, 485
HgaI	GACGC	1 cut(s)	35
HhaI	GCGC	2 cut(s)	165, 692
Hin1I	GRCGYC	1 cut(s)	27
Hin6I	GCGC	2 cut(s)	163, 690
HinP1I	GCGC	2 cut(s)	163, 690
HincII	GTYRAC	1 cut(s)	1546
HindII	GTYRAC	1 cut(s)	1546
HindIII	AAGCTT	1 cut(s)	1883
HinfI	GANTC	7 cut(s)	889, 1132, 1400, 1490, 1577, 1898, 1951
HpaII	CCGG	3 cut(s)	21, 78, 485
HphI	GGTGA	6 cut(s)	214, 832, 1330, 1394, 1445, 1647
Hpy166II	GTNNAC	6 cut(s)	61, 522, 713, 917, 1546, 1945
Hpy188III	TCNNGA	8 cut(s)	485, 514, 970, 986, 1356, 1742, 1769, 1955
Hpy8I	GTNNAC	6 cut(s)	61, 522, 713, 917, 1546, 1945
Hpy99I	CGWCG	2 cut(s)	29, 367
HpyAV	CCTTC	6 cut(s)	80, 97, 244, 364, 1767, 1962
HpyCH4III	ACNGT	7 cut(s)	58, 533, 710, 756, 1433, 1529, 1942
HpyCH4V	TGCA	9 cut(s)	215, 338, 452, 609, 895, 917, 1102, 1592, 1727
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 698, 1076, 1724
HpyF3I	CTNAG	6 cut(s)	600, 650, 720, 1071, 1206, 1913
Hsp92I	GRCGYC	1 cut(s)	27
HspAI	GCGC	2 cut(s)	163, 690
Kpn2I	TCCGGA	1 cut(s)	484
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Ksp22I	TGATCA	3 cut(s)	1384, 1414, 1480
Kzo9I	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
LmnI	GCTCC	1 cut(s)	160
Lsp1109I	GCAGC	3 cut(s)	350, 436, 553
LweI	GCATC	5 cut(s)	316, 850, 1074, 1160, 1351
MaeI	CTAG	3 cut(s)	543, 570, 1731
MaeIII	GTNAC	5 cut(s)	290, 595, 838, 1013, 1177
MalI	GATC	7 cut(s)	407, 552, 1076, 1320, 1386, 1416, 1482
MbiI	CCGCTC	1 cut(s)	32
MboI	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
MboII	GAAGA	9 cut(s)	199, 644, 680, 1310, 1448, 1568, 1730, 1784, 1856
MflI	RGATCY	2 cut(s)	550, 1318
MhlI	GDGCHC	4 cut(s)	208, 623, 919, 1808
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	7, 418, 476, 636, 870, 1064, 1609, 1752
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1126, 1394
MmeI	TCCRAC	2 cut(s)	120, 527
Mox20I	TGGCCA	1 cut(s)	5
MreI	CGCCGGCG	1 cut(s)	20
MroI	TCCGGA	1 cut(s)	484
MroNI	GCCGGC	1 cut(s)	20
MroXI	GAANNNNTTC	1 cut(s)	1050
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	2 cut(s)	1293, 1474
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	341
MspI	CCGG	3 cut(s)	21, 78, 485
MspR9I	CCNGG	3 cut(s)	459, 563, 1582
Mva1269I	GAATGC	1 cut(s)	1445
MvaI	CCWGG	3 cut(s)	459, 563, 1582
MwoI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 698, 1076, 1724
NaeI	GCCGGC	1 cut(s)	22
NcoI	CCATGG	1 cut(s)	381
NdeII	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
NgoMIV	GCCGGC	1 cut(s)	20
NmeAIII	GCCGAG	2 cut(s)	13, 1903
NmuCI	GTSAC	3 cut(s)	290, 838, 1177
NspI	RCATGY	4 cut(s)	202, 317, 687, 1226
PaeI	GCATGC	1 cut(s)	1226
PciI	ACATGT	2 cut(s)	313, 683
PctI	GAATGC	1 cut(s)	1445
PdiI	GCCGGC	1 cut(s)	22
PdmI	GAANNNNTTC	1 cut(s)	1050
PfeI	GAWTC	5 cut(s)	889, 1490, 1577, 1898, 1951
PkrI	GCNGC	5 cut(s)	31, 229, 340, 451, 568
PleI	GAGTC	2 cut(s)	1126, 1394
PpsI	GAGTC	2 cut(s)	1126, 1394
PscI	ACATGT	2 cut(s)	313, 683
Psp6I	CCWGG	3 cut(s)	457, 561, 1580
PspGI	CCWGG	3 cut(s)	457, 561, 1580
PspPI	GGNCC	2 cut(s)	1111, 1310
PsuI	RGATCY	2 cut(s)	550, 1318
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	7 cut(s)	521, 587, 813, 877, 982, 1126, 1641
RsaNI	GTAC	7 cut(s)	520, 586, 812, 876, 981, 1125, 1640
RseI	CAYNNNNRTG	2 cut(s)	1293, 1474
SatI	GCNGC	5 cut(s)	30, 228, 339, 450, 567
Sau3AI	GATC	7 cut(s)	405, 550, 1074, 1318, 1384, 1414, 1480
Sau96I	GGNCC	2 cut(s)	1111, 1310
ScaI	AGTACT	1 cut(s)	877
SchI	GAGTC	2 cut(s)	1126, 1394
ScrFI	CCNGG	3 cut(s)	459, 563, 1582
SduI	GDGCHC	4 cut(s)	208, 623, 919, 1808
SfaNI	GCATC	5 cut(s)	316, 850, 1074, 1160, 1351
SgrAI	CRCCGGYG	1 cut(s)	20
SinI	GGWCC	1 cut(s)	1310
SmiMI	CAYNNNNRTG	2 cut(s)	1293, 1474
SphI	GCATGC	1 cut(s)	1226
Sse9I	AATT	8 cut(s)	7, 418, 476, 636, 870, 1064, 1609, 1752
SsiI	CCGC	6 cut(s)	18, 30, 225, 228, 1149, 1279
SspI	AATATT	1 cut(s)	1411
SspMI	CTAG	3 cut(s)	543, 570, 1731
StyD4I	CCNGG	3 cut(s)	457, 561, 1580
StyI	CCWWGG	2 cut(s)	381, 1395
TaaI	ACNGT	7 cut(s)	58, 533, 710, 756, 1433, 1529, 1942
TaqI	TCGA	5 cut(s)	299, 445, 775, 1202, 1808
TasI	AATT	8 cut(s)	7, 418, 476, 636, 870, 1064, 1609, 1752
TatI	WGTACW	3 cut(s)	519, 875, 1639
TauI	GCSGC	2 cut(s)	32, 230
TfiI	GAWTC	5 cut(s)	889, 1490, 1577, 1898, 1951
TscAI	CASTG	1 cut(s)	538
TseFI	GTSAC	3 cut(s)	290, 838, 1177
TseI	GCWGC	3 cut(s)	338, 449, 566
Tsp45I	GTSAC	3 cut(s)	290, 838, 1177
TspRI	CASTG	1 cut(s)	538
VneI	GTGCAC	1 cut(s)	915
VpaK11BI	GGWCC	1 cut(s)	1310
XapI	RAATTY	1 cut(s)	1609
XceI	RCATGY	4 cut(s)	202, 317, 687, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XmiI	GTMKAC	2 cut(s)	60, 712
XmnI	GAANNNNTTC	1 cut(s)	1050
XspI	CTAG	3 cut(s)	543, 570, 1731
ZrmI	AGTACT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.