Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006148

Physical Location & Seq

Genomic Coordinates Reverse (-)

8976580 .. 8981014

Gene Structure 4435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G005620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGCCAATTCAGAAACCTCCGGCGACGCCGCTCGGCCGTGGCAGTCCTACACCAATGCCAAAGCCGGTATGGAAGGCGTGGATAAAGAGAAGGTTCAGAGAGTAGTGTATGAAATGAGTAAAGGGTCGGAGTATTTTAAGAACGAGGAGCGCAAGGAGGCTTTGATTAAGGAGAAGATAGAGAACATGCGTGCTCGGTGTGCAAAGCTCACCGCCGCAGATTTGGCTCACTATCAGAAGGTTGCTGATAAGCGAGTTGTGGAGTTAGAAGCAATGCGTGACCTGTCGAGGGTTTGGATACATGTGGATATGGATGCTTTCTATGCAGCTGTTGAGACATTAAGTGACCCGTCGTTGAAGGGAAAGCCCATGGCTGTTGGTGGTATGTCTATGATCTCAACTGCTAATTATGAGGCAAGGAGATTTGGGGTTCGAGCTGCAATGCCTGGCTTCATTGCTTGTAAATTATGTCTGGAGTTAATTTTTGTTCCAACAGATTTCAAGAAGTACACTTATTACAGTGATTTAACTAGAAAAGTGTTTCGGAAGTATGATCCTAACTTCCTGGCTGCTAGTTTAGAAGAAGCGTACCTTGATGTTACTGAGGTTTGCAAAGAAAAGGGCACTACTGGGGAAGAAATTGCCAAAGAACTCAGAGATGGTGTTTATGAAGAGACTGGTCTAACAGTTTGCTCAGATATAAACATACCAAATGGACAGTTTATTTTACCAAGCAATCGAATGGCTGTGATGACATTTATATCCTCACTTCCTATTGGGGGGATTGGAAAAGTCACTGAACATATTTTAAGGGACGCTCTTGGAATTAGTACTTGCGAGGAGATCCTGCACAAGAGCAGTTATATCTGTGCACTATTTTCTCATTCTACGGCAGGTAGTCATTTCATTATACCCTCATTGTCTGCCCTTCCATTGCAGATATCTTTCCTCTCTATGGGACTTGCCATCGGGAGGACAGATACTCTTGAACTCAGATTGAGGAAAAGTACAAGTAACGAGAGGTCATTTTCAGCCGCAGGGGATGAAGCATTTCTCTATCGTAAATTAGCTTCGACTTCTCAAAAATATGTATGCTCGACTCAGGATATATTGAAGCATGCTTCAAAGTTGCTTGAAGCTGAACTTTCTGTTTCTATAAGGCTGATGGGTTTGCGGGTGTCTCATTTTGATGAAGAAAAGGATGCTCCATCTGATCCCACACAAAAAACTCTCACTGACCATCTTTTATCAGGAGAAGCTTCAAGGAAAACTATGGGGGATCAAATCTCCTTGGACCCGGACACTATTGATTATCGCTTGATACATGGTGAAGAATCATGTTTATTTATACAAACCCATGAAACATATCCATGCGATCATGGAGGTCCTTTAGATGGCAATGATTGTTCAAATGCTGATGACCGTATGTCTACTTTGGTTAACACTTTCGAAGAAAAGAAAAAACTTGATGAATCCAGGAGTAATGCAAGTGCTGAAAAGACTGAGGAAAATGTTCAATTCGGAGTTTCACCATTGTCGAGAGCAAGTTATTCTTTTCATGGGAACTCCGAGGGCAGTAGCATAGACAGAGCAAATAGTGCAACTAGCAGTCTTCAGGATTTTCCAATTCCTTCATCTCATCAGGAAGAGTTGCTTTTGTGGGTGGATGACTACAAGTGCTCGATATGTGGAATAGAAGTGCCACCAGATTTTGTTGAAGAACGGCGAGAACACTTTGATTTTCATCTTGCCGAGAAGCTTCAAAACGAAGAATCTGGCATTAACTTCAGAACTTCCATGCCAAAGCAGAGAACAGTAAACATGGATCAGGATTTGAGCAGAAGGAAACACAAAAGGCATAAATCATCTCCAAAAGAAAGCAAACGCATACCTATTGATGTGTTCTTTGTTAAGAGCAGTCAGAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019985 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03460 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

IMS IMS_C IMS_HHH

Protein Analysis

643

Amino Acids

72.1

Weight (kDa)

5.73

Isoelectric Point (pI)

42.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	102 - 230	1e-37	impB/mucB/samB family
zf_UBZ	PF18439	556 - 590	4.6e-07	Ubiquitin-Binding Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980
fragaria_vesca	FvH4_2g04350
malus_domestica	MD05G1100500.v1.1
prunus_persica	Prupe.8G144900_v2.0.a1 Prupe.8G144900_v2.0.a1
pyrus_communis	pycom05g09900
rosa_chinensis	RchiOBHm_Chr6g0253811
rosa_laevigata	RLG00000014968
rosa_multiflora	Rmu_sc0006323.1_g000020
rosa_roxburghii	Rroxscaffold_7G00211500
rosa_rugosa	Rorug05G0547400 Rorug05G0547500 Rorug05G0547600
rosa_samantha	Rh6AG063000 Rh6BG056300 Rh6CG056400 Rh6DG054200
rosa_wichuraiana	Rw6G005610 Rw6G005620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	884
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	1 cut(s)	1430
AciI	CCGC	5 cut(s)	30, 213, 216, 1035, 1174
AclWI	GGATC	5 cut(s)	548, 838, 1208, 1287, 1833
AcoI	YGGCCR	2 cut(s)	3, 35
AcuI	CTGAAG	2 cut(s)	1598, 1771
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	4 cut(s)	509, 590, 832, 1009
AfiI	CCNNNNNNNGG	5 cut(s)	289, 779, 955, 972, 1394
AflIII	ACRYGT	1 cut(s)	301
AhdI	GACNNNNNGTC	1 cut(s)	1426
AjnI	CCWGG	3 cut(s)	445, 564, 1475
AluBI	AGCT	7 cut(s)	208, 329, 437, 1070, 1139, 1259, 1759
AluI	AGCT	7 cut(s)	208, 329, 437, 1070, 1139, 1259, 1759
Alw21I	GWGCWC	3 cut(s)	196, 874, 1682
Alw26I	GTCTC	3 cut(s)	329, 668, 1185
Alw44I	GTGCAC	1 cut(s)	870
AlwI	GGATC	5 cut(s)	548, 838, 1208, 1287, 1833
AoxI	GGCC	2 cut(s)	3, 35
ApaLI	GTGCAC	1 cut(s)	870
ApeKI	GCWGC	3 cut(s)	326, 437, 569
Asp700I	GAANNNNTTC	2 cut(s)	1050, 1512
AspLEI	GCGC	1 cut(s)	153
AspS9I	GGNCC	2 cut(s)	1294, 1385
AsuC2I	CCSGG	1 cut(s)	1298
AsuHPI	GGTGA	3 cut(s)	202, 1340, 1521
AsuII	TTCGAA	1 cut(s)	1449
AvaII	GGWCC	2 cut(s)	1294, 1385
BaeGI	GKGCMC	2 cut(s)	626, 874
BalI	TGGCCA	1 cut(s)	5
BarI	GAAGNNNNNNTAC	2 cut(s)	1054, 1086
BbsI	GAAGAC	1 cut(s)	1604
Bbv12I	GWGCWC	3 cut(s)	196, 874, 1682
BbvI	GCAGC	3 cut(s)	338, 424, 556
BccI	CCATC	6 cut(s)	653, 974, 1159, 1216, 1248, 1388
BceAI	ACGGC	3 cut(s)	22, 906, 1739
BciT130I	CCWGG	3 cut(s)	447, 566, 1477
BciVI	GTATCC	1 cut(s)	291
BcnI	CCSGG	1 cut(s)	1298
BcoDI	GTCTC	3 cut(s)	329, 668, 1185
BfaI	CTAG	3 cut(s)	531, 573, 1605
BfuAI	ACCTGC	1 cut(s)	884
BfuI	GTATCC	1 cut(s)	291
BisI	GCNGC	6 cut(s)	30, 216, 327, 438, 570, 1035
BlsI	GCNGC	6 cut(s)	31, 217, 328, 439, 571, 1036
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	4 cut(s)	447, 566, 1298, 1477
Bme18I	GGWCC	2 cut(s)	1294, 1385
BmeRI	GACNNNNNGTC	1 cut(s)	1426
BmgT120I	GGNCC	2 cut(s)	1294, 1385
BmiI	GGNNCC	1 cut(s)	1296
BmrFI	CCNGG	4 cut(s)	447, 566, 1298, 1477
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	2 cut(s)	304, 1192
BmuI	ACTGGG	1 cut(s)	639
BpiI	GAAGAC	1 cut(s)	1604
BpmI	CTGGAG	1 cut(s)	494
Bpu14I	TTCGAA	1 cut(s)	1449
BpuMI	CCSGG	1 cut(s)	1298
BsaBI	GATNNNNATC	1 cut(s)	1743
BsaHI	GRCGYC	1 cut(s)	27
BsaJI	CCNNGG	4 cut(s)	38, 369, 1290, 1569
Bsc4I	CCNNNNNNNGG	5 cut(s)	289, 779, 955, 972, 1394
Bse118I	RCCGGY	1 cut(s)	65
Bse1I	ACTGG	2 cut(s)	634, 682
Bse3DI	GCAATG	5 cut(s)	279, 447, 453, 932, 1405
Bse8I	GATNNNNATC	1 cut(s)	1743
BseBI	CCWGG	3 cut(s)	447, 566, 1477
BseDI	CCNNGG	4 cut(s)	38, 369, 1290, 1569
BseGI	GGATG	4 cut(s)	319, 1048, 1207, 1672
BseJI	GATNNNNATC	1 cut(s)	1743
BseLI	CCNNNNNNNGG	5 cut(s)	289, 779, 955, 972, 1394
BseMI	GCAATG	5 cut(s)	279, 447, 453, 932, 1405
BseMII	CTCAG	6 cut(s)	594, 667, 708, 1006, 1115, 1494
BseNI	ACTGG	2 cut(s)	634, 682
BseRI	GAGGAG	2 cut(s)	161, 854
BseSI	GKGCMC	2 cut(s)	626, 874
BseX3I	CGGCCG	1 cut(s)	35
BseXI	GCAGC	3 cut(s)	338, 424, 556
BsgI	GTGCAG	1 cut(s)	833
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	2 cut(s)	5, 37
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	3 cut(s)	196, 874, 1682
BsiSI	CCGG	3 cut(s)	21, 66, 1298
BslFI	GGGAC	2 cut(s)	827, 972
BslI	CCNNNNNNNGG	5 cut(s)	289, 779, 955, 972, 1394
BsmAI	GTCTC	3 cut(s)	329, 668, 1185
BsmFI	GGGAC	2 cut(s)	827, 972
BsnI	GGCC	2 cut(s)	5, 37
Bsp119I	TTCGAA	1 cut(s)	1449
Bsp1286I	GDGCHC	4 cut(s)	196, 626, 874, 1682
Bsp143I	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
Bsp19I	CCATGG	1 cut(s)	369
BspACI	CCGC	5 cut(s)	30, 213, 216, 1035, 1174
BspANI	GGCC	2 cut(s)	5, 37
BspCNI	CTCAG	6 cut(s)	595, 666, 707, 1005, 1114, 1495
BspLI	GGNNCC	1 cut(s)	1296
BspMI	ACCTGC	1 cut(s)	884
BspPI	GGATC	5 cut(s)	548, 838, 1208, 1287, 1833
BspT104I	TTCGAA	1 cut(s)	1449
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	5 cut(s)	279, 447, 453, 932, 1405
BsrFI	RCCGGY	1 cut(s)	65
BsrI	ACTGG	2 cut(s)	634, 682
BssAI	RCCGGY	1 cut(s)	65
BssECI	CCNNGG	4 cut(s)	38, 369, 1290, 1569
BssMI	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	2 cut(s)	369, 1290
Bst2UI	CCWGG	3 cut(s)	447, 566, 1477
Bst4CI	ACNGT	5 cut(s)	521, 688, 720, 1424, 1816
Bst6I	CTCTTC	2 cut(s)	666, 1641
BstACI	GRCGYC	1 cut(s)	27
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstBI	TTCGAA	1 cut(s)	1449
BstC8I	GCNNGC	2 cut(s)	192, 1119
BstDEI	CTNAG	6 cut(s)	603, 653, 694, 992, 1101, 1503
BstDSI	CCRYGG	2 cut(s)	38, 369
BstF5I	GGATG	4 cut(s)	319, 1048, 1207, 1672
BstHHI	GCGC	1 cut(s)	153
BstKTI	GATC	7 cut(s)	396, 556, 846, 1216, 1282, 1378, 1828
BstMAI	GTCTC	3 cut(s)	329, 668, 1185
BstMBI	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
BstMCI	CGRYCG	1 cut(s)	38
BstMWI	GCNNNNNNNGC	4 cut(s)	200, 224, 323, 1598
BstNI	CCWGG	3 cut(s)	447, 566, 1477
BstNSI	RCATGY	3 cut(s)	190, 305, 1121
BstSCI	CCNGG	4 cut(s)	445, 564, 1296, 1475
BstSLI	GKGCMC	2 cut(s)	626, 874
BstV1I	GCAGC	3 cut(s)	338, 424, 556
BstV2I	GAAGAC	1 cut(s)	1604
BstX2I	RGATCY	1 cut(s)	843
BstYI	RGATCY	1 cut(s)	843
BstZI	CGGCCG	1 cut(s)	35
BsuI	GTATCC	1 cut(s)	291
BsuRI	GGCC	2 cut(s)	5, 37
BtgI	CCRYGG	2 cut(s)	38, 369
BtsCI	GGATG	4 cut(s)	319, 1048, 1207, 1672
BtsIMutI	CAGTG	3 cut(s)	526, 795, 1233
BveI	ACCTGC	1 cut(s)	884
Cac8I	GCNNGC	2 cut(s)	192, 1119
CfoI	GCGC	1 cut(s)	153
Cfr10I	RCCGGY	1 cut(s)	65
Cfr13I	GGNCC	2 cut(s)	1294, 1385
CseI	GACGC	2 cut(s)	35, 824
Csp6I	GTAC	4 cut(s)	508, 589, 831, 1008
CviQI	GTAC	4 cut(s)	508, 589, 831, 1008
DdeI	CTNAG	6 cut(s)	603, 653, 694, 992, 1101, 1503
DpnI	GATC	7 cut(s)	395, 555, 845, 1215, 1281, 1377, 1827
DpnII	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
DriI	GACNNNNNGTC	1 cut(s)	1426
EaeI	YGGCCR	2 cut(s)	3, 35
EagI	CGGCCG	1 cut(s)	35
Eam1104I	CTCTTC	2 cut(s)	666, 1641
Eam1105I	GACNNNNNGTC	1 cut(s)	1426
EarI	CTCTTC	2 cut(s)	666, 1641
EclXI	CGGCCG	1 cut(s)	35
Eco130I	CCWWGG	2 cut(s)	369, 1290
Eco32I	GATATC	1 cut(s)	942
Eco47I	GGWCC	2 cut(s)	1294, 1385
Eco52I	CGGCCG	1 cut(s)	35
Eco57I	CTGAAG	2 cut(s)	1598, 1771
EcoO109I	RGGNCCY	1 cut(s)	1385
EcoRII	CCWGG	3 cut(s)	445, 564, 1475
EcoRV	GATATC	1 cut(s)	942
EcoT14I	CCWWGG	2 cut(s)	369, 1290
ErhI	CCWWGG	2 cut(s)	369, 1290
FalI	AAGNNNNNCTT	8 cut(s)	576, 608, 1128, 1160, 1537, 1569, 1638, 1670
FaqI	GGGAC	2 cut(s)	827, 972
FauI	CCCGC	1 cut(s)	1167
FblI	GTMKAC	1 cut(s)	1430
Fnu4HI	GCNGC	6 cut(s)	30, 216, 327, 438, 570, 1035
FokI	GGATG	4 cut(s)	326, 1055, 1214, 1679
Fsp4HI	GCNGC	6 cut(s)	30, 216, 327, 438, 570, 1035
FspBI	CTAG	3 cut(s)	531, 573, 1605
GlaI	GCGC	1 cut(s)	152
GluI	GCNGC	6 cut(s)	30, 216, 327, 438, 570, 1035
GsuI	CTGGAG	1 cut(s)	494
HaeIII	GGCC	2 cut(s)	5, 37
HapII	CCGG	3 cut(s)	21, 66, 1298
HgaI	GACGC	2 cut(s)	35, 824
HhaI	GCGC	1 cut(s)	153
Hin1I	GRCGYC	1 cut(s)	27
Hin6I	GCGC	1 cut(s)	151
HinP1I	GCGC	1 cut(s)	151
HincII	GTYRAC	1 cut(s)	1441
HindII	GTYRAC	1 cut(s)	1441
HindIII	AAGCTT	2 cut(s)	1257, 1757
HinfI	GANTC	4 cut(s)	1099, 1334, 1472, 1772
HpaI	GTTAAC	1 cut(s)	1441
HpaII	CCGG	3 cut(s)	21, 66, 1298
HphI	GGTGA	3 cut(s)	202, 1340, 1521
Hpy166II	GTNNAC	5 cut(s)	510, 872, 1431, 1441, 1819
Hpy8I	GTNNAC	5 cut(s)	510, 872, 1431, 1441, 1819
Hpy99I	CGWCG	2 cut(s)	29, 355
HpyAV	CCTTC	7 cut(s)	68, 85, 232, 352, 938, 1641, 1836
HpyCH4III	ACNGT	5 cut(s)	521, 688, 720, 1424, 1816
HpyCH4V	TGCA	9 cut(s)	203, 326, 440, 612, 850, 872, 937, 1487, 1601
HpyF10VI	GCNNNNNNNGC	4 cut(s)	200, 224, 323, 1598
HpyF3I	CTNAG	6 cut(s)	603, 653, 694, 992, 1101, 1503
Hsp92I	GRCGYC	1 cut(s)	27
HspAI	GCGC	1 cut(s)	151
KspAI	GTTAAC	1 cut(s)	1441
Kzo9I	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
LmnI	GCTCC	2 cut(s)	148, 1210
Lsp1109I	GCAGC	3 cut(s)	338, 424, 556
LweI	GCATC	2 cut(s)	304, 1192
MaeI	CTAG	3 cut(s)	531, 573, 1605
MaeIII	GTNAC	5 cut(s)	278, 344, 598, 793, 1013
MalI	GATC	7 cut(s)	395, 555, 845, 1215, 1281, 1377, 1827
MbiI	CCGCTC	1 cut(s)	32
MboI	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
MflI	RGATCY	1 cut(s)	843
MhlI	GDGCHC	4 cut(s)	196, 626, 874, 1682
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	7, 406, 464, 480, 639, 825, 1064, 1517, 1626
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	1093
MmeI	TCCRAC	2 cut(s)	108, 515
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	2 cut(s)	1050, 1512
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	9 cut(s)	138, 168, 341, 479, 527, 809, 1440, 1782, 1911
MslI	CAYNNNNRTG	2 cut(s)	1188, 1369
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	329
MspI	CCGG	3 cut(s)	21, 66, 1298
MspR9I	CCNGG	4 cut(s)	447, 566, 1298, 1477
MvaI	CCWGG	3 cut(s)	447, 566, 1477
MwoI	GCNNNNNNNGC	4 cut(s)	200, 224, 323, 1598
NciI	CCSGG	1 cut(s)	1298
NcoI	CCATGG	1 cut(s)	369
NdeII	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
NlaIV	GGNNCC	1 cut(s)	1296
NmeAIII	GCCGAG	2 cut(s)	13, 1777
NmuCI	GTSAC	3 cut(s)	278, 344, 793
NspI	RCATGY	3 cut(s)	190, 305, 1121
NspV	TTCGAA	1 cut(s)	1449
PaeI	GCATGC	1 cut(s)	1121
PciI	ACATGT	1 cut(s)	301
PdmI	GAANNNNTTC	2 cut(s)	1050, 1512
PfeI	GAWTC	3 cut(s)	1334, 1472, 1772
PfoI	TCCNGGA	1 cut(s)	1475
PkrI	GCNGC	6 cut(s)	31, 217, 328, 439, 571, 1036
PleI	GAGTC	1 cut(s)	1093
PpsI	GAGTC	1 cut(s)	1093
PpuMI	RGGWCCY	1 cut(s)	1385
PscI	ACATGT	1 cut(s)	301
Psp5II	RGGWCCY	1 cut(s)	1385
Psp6I	CCWGG	3 cut(s)	445, 564, 1475
PspGI	CCWGG	3 cut(s)	445, 564, 1475
PspN4I	GGNNCC	1 cut(s)	1296
PspPI	GGNCC	2 cut(s)	1294, 1385
PspPPI	RGGWCCY	1 cut(s)	1385
PsuI	RGATCY	1 cut(s)	843
PvuII	CAGCTG	1 cut(s)	329
RsaI	GTAC	4 cut(s)	509, 590, 832, 1009
RsaNI	GTAC	4 cut(s)	508, 589, 831, 1008
RseI	CAYNNNNRTG	2 cut(s)	1188, 1369
SaqAI	TTAA	9 cut(s)	138, 168, 341, 479, 527, 809, 1440, 1782, 1911
SatI	GCNGC	6 cut(s)	30, 216, 327, 438, 570, 1035
Sau3AI	GATC	7 cut(s)	393, 553, 843, 1213, 1279, 1375, 1825
Sau96I	GGNCC	2 cut(s)	1294, 1385
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	1 cut(s)	1093
ScrFI	CCNGG	4 cut(s)	447, 566, 1298, 1477
SduI	GDGCHC	4 cut(s)	196, 626, 874, 1682
SfaNI	GCATC	2 cut(s)	304, 1192
SfuI	TTCGAA	1 cut(s)	1449
SinI	GGWCC	2 cut(s)	1294, 1385
SmiMI	CAYNNNNRTG	2 cut(s)	1188, 1369
SphI	GCATGC	1 cut(s)	1121
Sse9I	AATT	9 cut(s)	7, 406, 464, 480, 639, 825, 1064, 1517, 1626
SsiI	CCGC	5 cut(s)	30, 213, 216, 1035, 1174
SspMI	CTAG	3 cut(s)	531, 573, 1605
StyD4I	CCNGG	4 cut(s)	445, 564, 1296, 1475
StyI	CCWWGG	2 cut(s)	369, 1290
TaaI	ACNGT	5 cut(s)	521, 688, 720, 1424, 1816
TaqI	TCGA	8 cut(s)	287, 433, 739, 1073, 1097, 1449, 1538, 1682
TasI	AATT	9 cut(s)	7, 406, 464, 480, 639, 825, 1064, 1517, 1626
TatI	WGTACW	3 cut(s)	507, 830, 1007
TauI	GCSGC	3 cut(s)	32, 218, 1037
TfiI	GAWTC	3 cut(s)	1334, 1472, 1772
Tru1I	TTAA	9 cut(s)	138, 168, 341, 479, 527, 809, 1440, 1782, 1911
Tru9I	TTAA	9 cut(s)	138, 168, 341, 479, 527, 809, 1440, 1782, 1911
TscAI	CASTG	3 cut(s)	526, 802, 1240
TseFI	GTSAC	3 cut(s)	278, 344, 793
TseI	GCWGC	3 cut(s)	326, 437, 569
Tsp45I	GTSAC	3 cut(s)	278, 344, 793
TspRI	CASTG	3 cut(s)	526, 802, 1240
VneI	GTGCAC	1 cut(s)	870
VpaK11BI	GGWCC	2 cut(s)	1294, 1385
XceI	RCATGY	3 cut(s)	190, 305, 1121
XcmI	CCANNNNNNNNNTGG	1 cut(s)	67
XmiI	GTMKAC	1 cut(s)	1430
XmnI	GAANNNNTTC	2 cut(s)	1050, 1512
XspI	CTAG	3 cut(s)	531, 573, 1605
ZrmI	AGTACT	1 cut(s)	832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.