Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006323.1

Orthogroup ID

OG0006148

Physical Location & Seq

Genomic Coordinates Reverse (-)

99580 .. 105967

Gene Structure 6388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006323.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

atggccaattcagaaaccgccggcgacgccgctcggccgtggcagtcctacaccaccgtctacaccaatgccaaagccggtatggaaggcgtggataaagagaaggttcagagagtagtgtatgaaatgagtaaagggtcggagtattttaagaacgaggagcgcaaggaggctttgattaaggagaagatagagaacatgcgcgctcggtgtgcaaagctcaccgccgcagatttggctcactatcagaaggttgctgataagagagttgtggagttagaagcaatgcgtgacctgtcgagggtttggatacatgtggatatggatgctttctatgcagctgttgagactttaagtgagccgtcgttgaagggaaagcccatggctgttggtggtatgtctatgatctcaactgctaattatgaggcaaggagatttggggttcgagctgcaatgcctggcttcattgctcgtaaattatgtccggagttagtttttgttccaacagatttcaagaagtacacttattacagtgatttaaccagaaaagtgtttcggaagtatgatcctaacttcctggctgctagtttagacgaagcgtaccttgatgttactgaggtttgcaaagaaaagggcactactggggaagaaattgccaaagaactcagagatggtgttaatgaagagactggtctaacatgtagtgctggagtagcaccaaaccgtctacttgctaaggtttgctcagatataaacaagccgaatggacagtttattttaccaagcaatcgaatggctgtgatgacatttatatcctcacttcctgtacgaaagattggggggattggaaaagtcactgaacatattttaagggatgctcttggaattagtacttgcgaggagattctgcaaaagagcagttatatctgtgcactattttctcattctacggcagattttttcctctctgtgggacttgccatcgggaggacaggtactcctgaagtcagattgaggaaaagtataagtaacgagaggacattttcagccacaggggatgaaacatttctctatcgtaaattagctgagatcgcagagatgctatctactgacttgcaaaaggagggcctttttgggcgtacattgactcttaaactcaaaaccgcatcttttgaggttcgcaccagagctgtgacttctcaaaaatatgtatgctcgactgaggatatattgaagcatgcttccaagttgcttaaagctgaacttcctgtttctataaggctgataggtttgcgggtgtctcattttgatgaagaaaagggtggtccatctgatcccacacaaaaatctctcaccgactatcttttatcaggagatgcttcagggaaaactatgggtgatcaaatctccttggactcggacaatattgatcatcgcttaatacacggtgaagaatcctgtttatttagagaaacccatgaaacatatccatgtgatcatggagattctttagatggcaatgcttgttcaaatgctgatgaccgtaagtctattttggtcaacacttctgaagaaatggaaaaacatgatgaatccaggggtaatgcaagtgctgaaaagataaattcaaatgacatacagactggggaaaatgtacaaaacagagtttcaccattgttgagagtaggttattcttttcatgggaactccgagggcagtaccatagacagagcaaatagtgtaactagcagtcttcaggattttccaattccttcatctcatcaggaagagttgcttttgtgggtggatgactacaagtgctcgatatgtggaatagaagtgccaccagattttgttgaagaacggcaagaacactttgattttcatcttgccaagaagcttcaaaacgatgaatctggcattaacctaagaacttccatgccaaagcagagaactgtaaacaagaatcacgatttgagcagaaggaaacacaaaaagcataaatcatctcgaaaagaaagcaaacacatacctattgatgtgttctttgttaagagcaataagaaggtaaaaatggaactagcctccatggctgcaagttccaacttctccatactgaaccccagaaacccatatagaacccaaattgcttcttcatcactgcacccatcaatccagaatagcaccaccccagttcagaataaaaaggaggatagcattgaagttactatgccaaccatgtctgagatattggactcatcgaggtcccagaaacttggccttaagcttcaaactctaggaccctttttcagaatcacagccaaaagcttagaaacagagaaagagctcggcagggctgaggggttcataagggtatggctaagcgggagaattcttcacttggattcaatcaagttgcgaagagagacgattggaatggagaagtcaatctttggcattggtttgttcattggagccgttgcaattagacatggctatgattgtggttgcgacaaagctgagttgctggctatcaatgactctgacaaataccatcacaagcttgttaggttctattcaagaattggattcaaagctgtgtatgaagtaactggttcaacatttggggaccttgcccacatgttggtctggggaggagttgggacaagaatggatgccaaagttgaagcacttctgataaaatggtgcagcaggttcaaatctcgacagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019985 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03460 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

IMS IMS_C IMS_HHH

Protein Analysis

910

Amino Acids

101.8

Weight (kDa)

8.36

Isoelectric Point (pI)

38.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980
fragaria_vesca	FvH4_2g04350
malus_domestica	MD05G1100500.v1.1
prunus_persica	Prupe.8G144900_v2.0.a1 Prupe.8G144900_v2.0.a1
pyrus_communis	pycom05g09900
rosa_chinensis	RchiOBHm_Chr6g0253811
rosa_laevigata	RLG00000014968
rosa_multiflora	Rmu_sc0006323.1_g000020
rosa_roxburghii	Rroxscaffold_7G00211500
rosa_rugosa	Rorug05G0547400 Rorug05G0547500 Rorug05G0547600
rosa_samantha	Rh6AG063000 Rh6BG056300 Rh6CG056400 Rh6DG054200
rosa_wichuraiana	Rw6G005610 Rw6G005620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2703
AccB7I	CCANNNNNTGG	1 cut(s)	2644
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	2 cut(s)	60, 727
AccII	CGCG	1 cut(s)	204
AccIII	TCCGGA	1 cut(s)	484
AciI	CCGC	7 cut(s)	18, 30, 225, 228, 1164, 1294, 2385
AclWI	GGATC	2 cut(s)	560, 1328
AcoI	YGGCCR	2 cut(s)	3, 35
AcsI	RAATTY	2 cut(s)	1624, 2391
AcuI	CTGAAG	4 cut(s)	1023, 1365, 1590, 1739
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	8 cut(s)	521, 602, 828, 892, 997, 1141, 1656, 1720
AfiI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 2644
AflII	CTTAAG	1 cut(s)	2282
AflIII	ACRYGT	3 cut(s)	313, 698, 2640
AhdI	GACNNNNNGTC	1 cut(s)	1546
AjnI	CCWGG	3 cut(s)	457, 576, 1595
Alw21I	GWGCWC	3 cut(s)	934, 1823, 2349
Alw26I	GTCTC	4 cut(s)	341, 680, 1305, 2420
Alw44I	GTGCAC	1 cut(s)	930
AlwI	GGATC	2 cut(s)	560, 1328
Aor13HI	TCCGGA	1 cut(s)	484
AoxI	GGCC	4 cut(s)	3, 35, 1126, 2278
ApaLI	GTGCAC	1 cut(s)	930
ApeKI	GCWGC	5 cut(s)	338, 449, 581, 2093, 2709
ApoI	RAATTY	2 cut(s)	1624, 2391
Asp700I	GAANNNNTTC	2 cut(s)	1065, 2691
AspLEI	GCGC	3 cut(s)	165, 204, 206
AspS9I	GGNCC	5 cut(s)	1126, 1325, 2265, 2300, 2629
AsuHPI	GGTGA	5 cut(s)	214, 1345, 1409, 1460, 1662
AvaII	GGWCC	4 cut(s)	1325, 2265, 2300, 2629
BaeGI	GKGCMC	2 cut(s)	638, 934
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	2349
BbsI	GAAGAC	1 cut(s)	1745
Bbv12I	GWGCWC	3 cut(s)	934, 1823, 2349
BbvCI	CCTCAGC	1 cut(s)	2358
BbvI	GCAGC	5 cut(s)	350, 436, 568, 2080, 2721
BccI	CCATC	6 cut(s)	665, 989, 1336, 1508, 2176, 2562
BceAI	ACGGC	5 cut(s)	22, 346, 966, 1880, 2462
BciT130I	CCWGG	3 cut(s)	459, 578, 1597
BciVI	GTATCC	1 cut(s)	303
BclI	TGATCA	3 cut(s)	1399, 1429, 1495
BcoDI	GTCTC	4 cut(s)	341, 680, 1305, 2420
BfaI	CTAG	4 cut(s)	585, 1746, 2081, 2297
BfrI	CTTAAG	1 cut(s)	2282
BfuAI	ACCTGC	1 cut(s)	2703
BfuI	GTATCC	1 cut(s)	303
BglI	GCCNNNNNGGC	1 cut(s)	2090
BisI	GCNGC	7 cut(s)	30, 228, 339, 450, 582, 2094, 2710
BlpI	GCTNAGC	1 cut(s)	2381
BlsI	GCNGC	7 cut(s)	31, 229, 340, 451, 583, 2095, 2711
BmcAI	AGTACT	1 cut(s)	892
Bme1390I	CCNGG	3 cut(s)	459, 578, 1597
Bme18I	GGWCC	4 cut(s)	1325, 2265, 2300, 2629
BmeRI	GACNNNNNGTC	1 cut(s)	1546
BmgT120I	GGNCC	5 cut(s)	1126, 1325, 2265, 2300, 2629
BmiI	GGNNCC	4 cut(s)	2267, 2302, 2476, 2630
BmrFI	CCNGG	3 cut(s)	459, 578, 1597
BmrI	ACTGGG	3 cut(s)	651, 1653, 2186
BmsI	GCATC	6 cut(s)	316, 865, 1089, 1175, 1366, 2665
BmuI	ACTGGG	3 cut(s)	651, 1653, 2186
BpiI	GAAGAC	1 cut(s)	1745
BpmI	CTGGAG	1 cut(s)	729
Bpu10I	CCTNAGC	2 cut(s)	735, 2358
Bpu1102I	GCTNAGC	1 cut(s)	2381
BsaBI	GATNNNNATC	1 cut(s)	1884
BsaHI	GRCGYC	1 cut(s)	27
BsaJI	CCNNGG	6 cut(s)	38, 381, 1410, 1596, 1710, 2088
BsaWI	WCCGGW	1 cut(s)	484
BsaXI	ACNNNNNCTCC	4 cut(s)	979, 982, 1009, 1012
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 2644
Bse118I	RCCGGY	2 cut(s)	20, 77
Bse1I	ACTGG	5 cut(s)	646, 694, 1648, 2192, 2617
Bse3DI	GCAATG	4 cut(s)	291, 459, 465, 1525
Bse8I	GATNNNNATC	1 cut(s)	1884
BseAI	TCCGGA	1 cut(s)	484
BseBI	CCWGG	3 cut(s)	459, 578, 1597
BseDI	CCNNGG	6 cut(s)	38, 381, 1410, 1596, 1710, 2088
BseGI	GGATG	5 cut(s)	331, 880, 1063, 1813, 2680
BseJI	GATNNNNATC	1 cut(s)	1884
BseLI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 2644
BseMI	GCAATG	4 cut(s)	291, 459, 465, 1525
BseMII	CTCAG	8 cut(s)	606, 679, 759, 1077, 1212, 2235, 2349, 2511
BseNI	ACTGG	5 cut(s)	646, 694, 1648, 2192, 2617
BsePI	GCGCGC	1 cut(s)	202
BseRI	GAGGAG	3 cut(s)	173, 914, 2670
BseSI	GKGCMC	2 cut(s)	638, 934
BseX3I	CGGCCG	1 cut(s)	35
BseXI	GCAGC	5 cut(s)	350, 436, 568, 2080, 2721
BsgI	GTGCAG	2 cut(s)	2147, 2728
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	4 cut(s)	5, 37, 1128, 2280
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	3 cut(s)	934, 1823, 2349
BsiSI	CCGG	3 cut(s)	21, 78, 485
BslFI	GGGAC	4 cut(s)	987, 2251, 2642, 2677
BslI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 2644
BsmAI	GTCTC	4 cut(s)	341, 680, 1305, 2420
BsmBI	CGTCTC	1 cut(s)	2420
BsmFI	GGGAC	4 cut(s)	987, 2251, 2642, 2677
BsnI	GGCC	4 cut(s)	5, 37, 1128, 2280
Bsp1286I	GDGCHC	4 cut(s)	638, 934, 1823, 2349
Bsp13I	TCCGGA	1 cut(s)	484
Bsp1407I	TGTACA	1 cut(s)	1654
Bsp143I	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
Bsp1720I	GCTNAGC	1 cut(s)	2381
Bsp19I	CCATGG	2 cut(s)	381, 2088
BspACI	CCGC	7 cut(s)	18, 30, 225, 228, 1164, 1294, 2385
BspANI	GGCC	4 cut(s)	5, 37, 1128, 2280
BspCNI	CTCAG	8 cut(s)	607, 678, 758, 1078, 1213, 2236, 2350, 2512
BspEI	TCCGGA	1 cut(s)	484
BspFNI	CGCG	1 cut(s)	204
BspLI	GGNNCC	4 cut(s)	2267, 2302, 2476, 2630
BspMI	ACCTGC	1 cut(s)	2703
BspPI	GGATC	2 cut(s)	560, 1328
BspTI	CTTAAG	1 cut(s)	2282
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	4 cut(s)	291, 459, 465, 1525
BsrFI	RCCGGY	2 cut(s)	20, 77
BsrGI	TGTACA	1 cut(s)	1654
BsrI	ACTGG	5 cut(s)	646, 694, 1648, 2192, 2617
BssAI	RCCGGY	2 cut(s)	20, 77
BssECI	CCNNGG	6 cut(s)	38, 381, 1410, 1596, 1710, 2088
BssHII	GCGCGC	1 cut(s)	202
BssMI	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	381, 1410, 2088
Bst2UI	CCWGG	3 cut(s)	459, 578, 1597
Bst4CI	ACNGT	8 cut(s)	58, 533, 725, 771, 1448, 1544, 1957, 2730
Bst6I	CTCTTC	3 cut(s)	678, 1782, 2416
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	2282
BstAUI	TGTACA	1 cut(s)	1654
BstC8I	GCNNGC	4 cut(s)	22, 204, 1239, 2529
BstDSI	CCRYGG	3 cut(s)	38, 381, 2088
BstF5I	GGATG	5 cut(s)	331, 880, 1063, 1813, 2680
BstFNI	CGCG	1 cut(s)	204
BstHHI	GCGC	3 cut(s)	165, 204, 206
BstKTI	GATC	7 cut(s)	408, 568, 1092, 1336, 1402, 1432, 1498
BstMAI	GTCTC	4 cut(s)	341, 680, 1305, 2420
BstMBI	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
BstMCI	CGRYCG	1 cut(s)	38
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 713, 1091, 2090
BstNI	CCWGG	3 cut(s)	459, 578, 1597
BstNSI	RCATGY	5 cut(s)	202, 317, 702, 1241, 2644
BstSCI	CCNGG	3 cut(s)	457, 576, 1595
BstSLI	GKGCMC	2 cut(s)	638, 934
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	5 cut(s)	350, 436, 568, 2080, 2721
BstV2I	GAAGAC	1 cut(s)	1745
BstXI	CCANNNNNNTGG	1 cut(s)	2276
BstZI	CGGCCG	1 cut(s)	35
BsuI	GTATCC	1 cut(s)	303
BsuRI	GGCC	4 cut(s)	5, 37, 1128, 2280
BtgI	CCRYGG	3 cut(s)	38, 381, 2088
BtgZI	GCGATG	1 cut(s)	1418
BtsCI	GGATG	5 cut(s)	331, 880, 1063, 1813, 2680
BtsI	GCAGTG	1 cut(s)	2159
BtsIMutI	CAGTG	3 cut(s)	538, 855, 2159
BveI	ACCTGC	1 cut(s)	2703
Cac8I	GCNNGC	4 cut(s)	22, 204, 1239, 2529
CfoI	GCGC	3 cut(s)	165, 204, 206
Cfr10I	RCCGGY	2 cut(s)	20, 77
Cfr13I	GGNCC	5 cut(s)	1126, 1325, 2265, 2300, 2629
CseI	GACGC	1 cut(s)	35
Csp6I	GTAC	8 cut(s)	520, 601, 827, 891, 996, 1140, 1655, 1719
CviQI	GTAC	8 cut(s)	520, 601, 827, 891, 996, 1140, 1655, 1719
DpnI	GATC	7 cut(s)	407, 567, 1091, 1335, 1401, 1431, 1497
DpnII	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
DriI	GACNNNNNGTC	1 cut(s)	1546
EaeI	YGGCCR	2 cut(s)	3, 35
EagI	CGGCCG	1 cut(s)	35
Eam1104I	CTCTTC	3 cut(s)	678, 1782, 2416
Eam1105I	GACNNNNNGTC	1 cut(s)	1546
EarI	CTCTTC	3 cut(s)	678, 1782, 2416
Ecl136II	GAGCTC	1 cut(s)	2347
EclXI	CGGCCG	1 cut(s)	35
Eco130I	CCWWGG	3 cut(s)	381, 1410, 2088
Eco24I	GRGCYC	1 cut(s)	2349
Eco47I	GGWCC	4 cut(s)	1325, 2265, 2300, 2629
Eco52I	CGGCCG	1 cut(s)	35
Eco53kI	GAGCTC	1 cut(s)	2347
Eco57I	CTGAAG	4 cut(s)	1023, 1365, 1590, 1739
EcoICRI	GAGCTC	1 cut(s)	2347
EcoO109I	RGGNCCY	4 cut(s)	1126, 2265, 2300, 2629
EcoRI	GAATTC	1 cut(s)	2391
EcoRII	CCWGG	3 cut(s)	457, 576, 1595
EcoT14I	CCWWGG	3 cut(s)	381, 1410, 2088
EcoT38I	GRGCYC	1 cut(s)	2349
ErhI	CCWWGG	3 cut(s)	381, 1410, 2088
Esp3I	CGTCTC	1 cut(s)	2420
FalI	AAGNNNNNCTT	8 cut(s)	588, 620, 1248, 1280, 1779, 1811, 2435, 2467
FaqI	GGGAC	4 cut(s)	987, 2251, 2642, 2677
FauI	CCCGC	2 cut(s)	1287, 2378
FbaI	TGATCA	3 cut(s)	1399, 1429, 1495
FblI	GTMKAC	2 cut(s)	60, 727
Fnu4HI	GCNGC	7 cut(s)	30, 228, 339, 450, 582, 2094, 2710
FokI	GGATG	5 cut(s)	338, 887, 1070, 1820, 2687
FriOI	GRGCYC	1 cut(s)	2349
Fsp4HI	GCNGC	7 cut(s)	30, 228, 339, 450, 582, 2094, 2710
FspBI	CTAG	4 cut(s)	585, 1746, 2081, 2297
GlaI	GCGC	3 cut(s)	164, 203, 205
GluI	GCNGC	7 cut(s)	30, 228, 339, 450, 582, 2094, 2710
GsuI	CTGGAG	1 cut(s)	729
HaeIII	GGCC	4 cut(s)	5, 37, 1128, 2280
HapII	CCGG	3 cut(s)	21, 78, 485
HgaI	GACGC	1 cut(s)	35
HhaI	GCGC	3 cut(s)	165, 204, 206
Hin1I	GRCGYC	1 cut(s)	27
Hin6I	GCGC	3 cut(s)	163, 202, 204
HinP1I	GCGC	3 cut(s)	163, 202, 204
HincII	GTYRAC	1 cut(s)	1561
HindII	GTYRAC	1 cut(s)	1561
HindIII	AAGCTT	4 cut(s)	1898, 2285, 2326, 2561
HpaII	CCGG	3 cut(s)	21, 78, 485
HphI	GGTGA	5 cut(s)	214, 1345, 1409, 1460, 1662
Hpy166II	GTNNAC	6 cut(s)	61, 522, 728, 932, 1561, 1960
Hpy8I	GTNNAC	6 cut(s)	61, 522, 728, 932, 1561, 1960
Hpy99I	CGWCG	2 cut(s)	29, 367
HpyAV	CCTTC	7 cut(s)	80, 97, 244, 364, 1782, 1977, 2059
HpyCH4III	ACNGT	8 cut(s)	58, 533, 725, 771, 1448, 1544, 1957, 2730
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 713, 1091, 2090
Hsp92I	GRCGYC	1 cut(s)	27
HspAI	GCGC	3 cut(s)	163, 202, 204
Kpn2I	TCCGGA	1 cut(s)	484
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Ksp22I	TGATCA	3 cut(s)	1399, 1429, 1495
Kzo9I	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
LmnI	GCTCC	2 cut(s)	160, 2474
Lsp1109I	GCAGC	5 cut(s)	350, 436, 568, 2080, 2721
LweI	GCATC	6 cut(s)	316, 865, 1089, 1175, 1366, 2665
MaeI	CTAG	4 cut(s)	585, 1746, 2081, 2297
MaeIII	GTNAC	8 cut(s)	290, 610, 853, 1028, 1192, 1741, 2224, 2608
MalI	GATC	7 cut(s)	407, 567, 1091, 1335, 1401, 1431, 1497
MbiI	CCGCTC	1 cut(s)	32
MboI	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
MhlI	GDGCHC	4 cut(s)	638, 934, 1823, 2349
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	1141, 1409, 2249, 2534
MmeI	TCCRAC	3 cut(s)	120, 527, 2127
Mox20I	TGGCCA	1 cut(s)	5
MreI	CGCCGGCG	1 cut(s)	20
MroI	TCCGGA	1 cut(s)	484
MroNI	GCCGGC	1 cut(s)	20
MroXI	GAANNNNTTC	2 cut(s)	1065, 2691
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	3 cut(s)	1308, 1489, 2496
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	341
MspCI	CTTAAG	1 cut(s)	2282
MspI	CCGG	3 cut(s)	21, 78, 485
MspR9I	CCNGG	3 cut(s)	459, 578, 1597
MvaI	CCWGG	3 cut(s)	459, 578, 1597
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	7 cut(s)	26, 212, 236, 335, 713, 1091, 2090
NaeI	GCCGGC	1 cut(s)	22
NcoI	CCATGG	2 cut(s)	381, 2088
NdeII	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
NgoMIV	GCCGGC	1 cut(s)	20
NlaIV	GGNNCC	4 cut(s)	2267, 2302, 2476, 2630
NmeAIII	GCCGAG	2 cut(s)	13, 2328
NmuCI	GTSAC	3 cut(s)	290, 853, 1192
NspI	RCATGY	5 cut(s)	202, 317, 702, 1241, 2644
PaeI	GCATGC	1 cut(s)	1241
PauI	GCGCGC	1 cut(s)	202
PciI	ACATGT	3 cut(s)	313, 698, 2640
PdiI	GCCGGC	1 cut(s)	22
PdmI	GAANNNNTTC	2 cut(s)	1065, 2691
PfeI	GAWTC	9 cut(s)	904, 1454, 1505, 1592, 1913, 1966, 2313, 2405, 2589
PflMI	CCANNNNNTGG	1 cut(s)	2644
PkrI	GCNGC	7 cut(s)	31, 229, 340, 451, 583, 2095, 2711
PleI	GAGTC	4 cut(s)	1141, 1409, 2249, 2534
PpsI	GAGTC	4 cut(s)	1141, 1409, 2249, 2534
PpuMI	RGGWCCY	3 cut(s)	2265, 2300, 2629
PscI	ACATGT	3 cut(s)	313, 698, 2640
Psp124BI	GAGCTC	1 cut(s)	2349
Psp5II	RGGWCCY	3 cut(s)	2265, 2300, 2629
Psp6I	CCWGG	3 cut(s)	457, 576, 1595
PspGI	CCWGG	3 cut(s)	457, 576, 1595
PspN4I	GGNNCC	4 cut(s)	2267, 2302, 2476, 2630
PspPI	GGNCC	5 cut(s)	1126, 1325, 2265, 2300, 2629
PspPPI	RGGWCCY	3 cut(s)	2265, 2300, 2629
PteI	GCGCGC	1 cut(s)	202
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	8 cut(s)	521, 602, 828, 892, 997, 1141, 1656, 1720
RsaNI	GTAC	8 cut(s)	520, 601, 827, 891, 996, 1140, 1655, 1719
RseI	CAYNNNNRTG	3 cut(s)	1308, 1489, 2496
SacI	GAGCTC	1 cut(s)	2349
SatI	GCNGC	7 cut(s)	30, 228, 339, 450, 582, 2094, 2710
Sau3AI	GATC	7 cut(s)	405, 565, 1089, 1333, 1399, 1429, 1495
Sau96I	GGNCC	5 cut(s)	1126, 1325, 2265, 2300, 2629
ScaI	AGTACT	1 cut(s)	892
SchI	GAGTC	4 cut(s)	1141, 1409, 2249, 2534
ScrFI	CCNGG	3 cut(s)	459, 578, 1597
SduI	GDGCHC	4 cut(s)	638, 934, 1823, 2349
SfaNI	GCATC	6 cut(s)	316, 865, 1089, 1175, 1366, 2665
SgrAI	CRCCGGYG	1 cut(s)	20
SinI	GGWCC	4 cut(s)	1325, 2265, 2300, 2629
SmiMI	CAYNNNNRTG	3 cut(s)	1308, 1489, 2496
SmlI	CTYRAG	1 cut(s)	2282
SmoI	CTYRAG	1 cut(s)	2282
SphI	GCATGC	1 cut(s)	1241
SsiI	CCGC	7 cut(s)	18, 30, 225, 228, 1164, 1294, 2385
SspI	AATATT	1 cut(s)	1426
SspMI	CTAG	4 cut(s)	585, 1746, 2081, 2297
SstI	GAGCTC	1 cut(s)	2349
StyD4I	CCNGG	3 cut(s)	457, 576, 1595
StyI	CCWWGG	3 cut(s)	381, 1410, 2088
TaaI	ACNGT	8 cut(s)	58, 533, 725, 771, 1448, 1544, 1957, 2730
TaqI	TCGA	8 cut(s)	299, 445, 790, 1217, 1823, 2011, 2261, 2725
TatI	WGTACW	3 cut(s)	519, 890, 1654
TauI	GCSGC	2 cut(s)	32, 230
TfiI	GAWTC	9 cut(s)	904, 1454, 1505, 1592, 1913, 1966, 2313, 2405, 2589
TscAI	CASTG	3 cut(s)	538, 862, 2166
TseFI	GTSAC	3 cut(s)	290, 853, 1192
TseI	GCWGC	5 cut(s)	338, 449, 581, 2093, 2709
Tsp45I	GTSAC	3 cut(s)	290, 853, 1192
TspRI	CASTG	3 cut(s)	538, 862, 2166
Van91I	CCANNNNNTGG	1 cut(s)	2644
Vha464I	CTTAAG	1 cut(s)	2282
VneI	GTGCAC	1 cut(s)	930
VpaK11BI	GGWCC	4 cut(s)	1325, 2265, 2300, 2629
XapI	RAATTY	2 cut(s)	1624, 2391
XceI	RCATGY	5 cut(s)	202, 317, 702, 1241, 2644
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XmiI	GTMKAC	2 cut(s)	60, 727
XmnI	GAANNNNTTC	2 cut(s)	1065, 2691
XspI	CTAG	4 cut(s)	585, 1746, 2081, 2297
ZrmI	AGTACT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.