Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0006148

Physical Location & Seq

Genomic Coordinates Reverse (-)

5728276 .. 5733122

Gene Structure 4847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG056400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGCCAATTCAGAAACCTCTAGCGACGCCGCTCGGCCGTGGCAGTCCTACACCACCGTCTACACCAATGCCAAAGCCGGTATGGAAGGCGTGGATAAGGAGAAGGTTCAGAGAGTAGTGTACGAGATGAGCAAAGGATCGGAGTATTTTAAGAACGAGGAGCGCAAGGAGGCTTTGATTAAGGAGAAGATAGAGAACATGCGTGCTCGGTGTGCGAAGCTCACCGCAGCAGATTTGGCTCACTATCAGAAGGTTGCTGATAAGAGAGTTGTGGAGTTAGAAGCAATGCGTGACCTGTCGAGGGTTTGGATACATGTGGATATGGATGCTTTCTATGCAGCTGTTGAGACTTTAAGTGACCCATCGTTGAAGGGAAAGCCCATGGCTGTTGGTGGTATGTCTATGATCTCAACTGCTAATTATGAGGCGCGAAGATTTGGGGTTCGAGCTGCAATGCCTGGCTTCATTGCTCGTAAATTATGTCCCAAGTTAGTTTTTGTTCCAATAGATTTCAAGAAGTACACTTATTACAGTGATTTAACTAGAAAAGTGTTTCGGAAGTATGATCCTAACTTCCTGGCTGCTAGTTTAGACGAAGCGTACCTTGATGTTACTGAGGTTTGCAAAGAAAAGGGCACTACTGGGGAAGACATTGCCAAAGAACTCAGAGATGGTGTTTATGAAGAGACTGGTCTAACATGTAGCGCTGGAGTAGCACCAAACCGTCTACTTGCTAAGGTTTGTTCAGATATAAACAAGCCGAATGGACAGTTTATTTTACCAAGCAATCGAATGGCTGTGATGACATTTATATCCTCACTTCCTGTACGAAAGATTGGGGGGATTGGAAAAGTCACTGAACATATTTTAAGGGATGCTCTTGGAATTAGTACTTGCGAGGAGATTCTGCAAAAGAGCAGTTATATCTGTGCACTATTTTCTCATTCTACGGCAGATTTTTTCCTCTCTGTGGGACTTGCCATCGGGAGGACAGATACTCCAGAAGTCAGATTGAGGAAAAGTATAAGTAACGAGAGGACATTTTCAGCCACAGGGGATGAAGCATTTCTCTATCGTAAATTAGCTGAGATCGCAGAGATGCTATCTACTGACTTGCAAAAGGAGGGCCTTTTTGGGCGTACATTGACTCTTAAACTCAAAACCGCATCTTTTGAGGTTCGCACCAGAGCTGTGACTTCTCAAAAATATGTATGCTCGACTGAGGAAATATTGAAGCATGCTTCCAAGTTGCTTAAAGCTGAACTTCCTGTTTCTATAAGGCTGATAGGTTTGCGGGTGTCTCATTTTGATGAAGAAAAGGGTGCTCCATCTGATCCCACACAAAAATCTCTCACCGACTATCTTTTATCTGGAGATGCTTCAAGGAAAACCATGGGTGATCAAATCTCCTTGGACTCGGACAATATTGATCATCGCTTAATACACGGTGAAGAATCCTGTTTATTTATAGAAACCCATGAAACATATCCATGTGATCATGGAGATCCTTTAGATGGCAATGCTTGTTCAAATGCTGATGACCGTAAGTCTATTTTGGTCAACATTTCTGAAGAAAAGGAAAAACATGATGAATCCAGGGGTAATGCAAGTTCTGAAAAGATGAATTCAAATGACATACAGACTGAGGAAAATGTTCAATTCGGAGTTTCACCATTGTCGAGAGCAGGTTATTCTTTTCATTGGGACTCCGAGGGCAGTAGCATAGACAGAGCGAATAGTATAACTAGCACCCTTAAGGATTGTCCAATTCCTTCATCCCATCAGAAAGAGTTGCTTTTGTGGGTGGATGACTACAAGTGTTCGATATGTGGAATAGAAATGCCACCAGATTTTGTTGAAGAACGTCAAGAACACTTTGATTTTCATCTTGCCGAGAAGCTTCAAAACGATGAATCTGGCATTAACCTAAGAACTTCCATGCCAAAGCAGAGAACTGTAAACAAGGATCATGATTTGAGCAGAAGGAAACCCAAAAAGCATAAATCATCTCCAAAAGAAAGCAAACACATACCTATTGATGTGTTCTTTGTTAAGAGCAGTCAGAACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000731 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0003887 GO:0005488 GO:0005575 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019985 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0042276 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0071704 GO:0071897 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 ko05200 ko05202 ko05210 ko05212 ko05213 ko05214 ko05216 ko05217 ko05218 ko05220 ko05222 ko05223 ko05224 ko05225 ko05226 map03460 map05200 map05202 map05210 map05212 map05213 map05214 map05216 map05217 map05218 map05220 map05222 map05223 map05224 map05225 map05226

Pfam Domains

Protein Families

IMS IMS_C IMS_HHH

Protein Analysis

690

Amino Acids

77.41

Weight (kDa)

6.27

Isoelectric Point (pI)

39.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	106 - 250	9.9e-50	impB/mucB/samB family
IMS_C	PF11799	339 - 442	3.4e-21	impB/mucB/samB family C-terminal domain
zf_UBZ	PF18439	603 - 636	2.8e-07	Ubiquitin-Binding Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980 AT1G49980
fragaria_vesca	FvH4_2g04350
malus_domestica	MD05G1100500.v1.1
prunus_persica	Prupe.8G144900_v2.0.a1 Prupe.8G144900_v2.0.a1
pyrus_communis	pycom05g09900
rosa_chinensis	RchiOBHm_Chr6g0253811
rosa_laevigata	RLG00000014968
rosa_multiflora	Rmu_sc0006323.1_g000020
rosa_roxburghii	Rroxscaffold_7G00211500
rosa_rugosa	Rorug05G0547400 Rorug05G0547500 Rorug05G0547600
rosa_samantha	Rh6AG063000 Rh6BG056300 Rh6CG056400 Rh6DG054200
rosa_wichuraiana	Rw6G005610 Rw6G005620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1676
AccBSI	CCGCTC	1 cut(s)	32
AccI	GTMKAC	2 cut(s)	60, 727
AccII	CGCG	1 cut(s)	430
AciI	CCGC	4 cut(s)	30, 225, 1164, 1294
AclWI	GGATC	5 cut(s)	145, 560, 1328, 1499, 1974
AcoI	YGGCCR	2 cut(s)	3, 35
AcsI	RAATTY	1 cut(s)	1624
AcuI	CTGAAG	1 cut(s)	1590
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	6 cut(s)	122, 521, 602, 828, 892, 1141
AfeI	AGCGCT	1 cut(s)	706
AfiI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 1514
AflII	CTTAAG	1 cut(s)	1754
AflIII	ACRYGT	2 cut(s)	313, 698
AgsI	TTSAA	9 cut(s)	370, 514, 1234, 1383, 1530, 1629, 1658, 1859, 1904
AhdI	GACNNNNNGTC	1 cut(s)	1546
AjnI	CCWGG	3 cut(s)	457, 576, 1595
AluBI	AGCT	7 cut(s)	220, 341, 449, 1085, 1190, 1259, 1900
AluI	AGCT	7 cut(s)	220, 341, 449, 1085, 1190, 1259, 1900
Alw21I	GWGCWC	3 cut(s)	208, 934, 1327
Alw26I	GTCTC	3 cut(s)	341, 680, 1305
Alw44I	GTGCAC	1 cut(s)	930
AlwI	GGATC	5 cut(s)	145, 560, 1328, 1499, 1974
Aor51HI	AGCGCT	1 cut(s)	706
AoxI	GGCC	3 cut(s)	3, 35, 1126
ApaLI	GTGCAC	1 cut(s)	930
ApeKI	GCWGC	4 cut(s)	227, 338, 449, 581
ApoI	RAATTY	1 cut(s)	1624
Asp700I	GAANNNNTTC	2 cut(s)	1065, 1653
AspLEI	GCGC	3 cut(s)	165, 430, 707
AspS9I	GGNCC	1 cut(s)	1126
AsuHPI	GGTGA	5 cut(s)	214, 1345, 1409, 1460, 1662
BaeGI	GKGCMC	2 cut(s)	638, 934
BalI	TGGCCA	1 cut(s)	5
BbsI	GAAGAC	1 cut(s)	654
Bbv12I	GWGCWC	3 cut(s)	208, 934, 1327
BbvI	GCAGC	4 cut(s)	239, 350, 436, 568
BccI	CCATC	6 cut(s)	370, 665, 989, 1336, 1508, 1788
BceAI	ACGGC	2 cut(s)	22, 966
BciT130I	CCWGG	3 cut(s)	459, 578, 1597
BciVI	GTATCC	1 cut(s)	303
BclI	TGATCA	3 cut(s)	1399, 1429, 1495
BcoDI	GTCTC	3 cut(s)	341, 680, 1305
BfaI	CTAG	4 cut(s)	21, 543, 585, 1746
BfoI	RGCGCY	1 cut(s)	708
BfrI	CTTAAG	1 cut(s)	1754
BfuAI	ACCTGC	1 cut(s)	1676
BfuI	GTATCC	1 cut(s)	303
BisI	GCNGC	5 cut(s)	30, 228, 339, 450, 582
BlsI	GCNGC	5 cut(s)	31, 229, 340, 451, 583
BmcAI	AGTACT	1 cut(s)	892
Bme1390I	CCNGG	3 cut(s)	459, 578, 1597
BmeRI	GACNNNNNGTC	1 cut(s)	1546
BmgT120I	GGNCC	1 cut(s)	1126
BmrFI	CCNGG	3 cut(s)	459, 578, 1597
BmrI	ACTGGG	1 cut(s)	651
BmsI	GCATC	5 cut(s)	316, 865, 1089, 1175, 1366
BmuI	ACTGGG	1 cut(s)	651
BpiI	GAAGAC	1 cut(s)	654
BpmI	CTGGAG	3 cut(s)	729, 984, 1392
Bpu10I	CCTNAGC	1 cut(s)	735
BsaBI	GATNNNNATC	1 cut(s)	1884
BsaHI	GRCGYC	1 cut(s)	27
BsaJI	CCNNGG	6 cut(s)	38, 381, 1392, 1410, 1596, 1710
BsaXI	ACNNNNNCTCC	2 cut(s)	982, 1012
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 1514
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	2 cut(s)	646, 694
Bse3DI	GCAATG	5 cut(s)	291, 459, 465, 651, 1525
Bse8I	GATNNNNATC	1 cut(s)	1884
BseBI	CCWGG	3 cut(s)	459, 578, 1597
BseDI	CCNNGG	6 cut(s)	38, 381, 1392, 1410, 1596, 1710
BseGI	GGATG	5 cut(s)	331, 880, 1063, 1775, 1813
BseJI	GATNNNNATC	1 cut(s)	1884
BseLI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 1514
BseMI	GCAATG	5 cut(s)	291, 459, 465, 651, 1525
BseMII	CTCAG	5 cut(s)	606, 679, 1077, 1212, 1635
BseNI	ACTGG	2 cut(s)	646, 694
BseRI	GAGGAG	2 cut(s)	173, 914
BseSI	GKGCMC	2 cut(s)	638, 934
BseX3I	CGGCCG	1 cut(s)	35
BseXI	GCAGC	4 cut(s)	239, 350, 436, 568
Bsh1236I	CGCG	1 cut(s)	430
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	3 cut(s)	5, 37, 1128
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	3 cut(s)	208, 934, 1327
BsiSI	CCGG	1 cut(s)	78
BslFI	GGGAC	3 cut(s)	468, 987, 1718
BslI	CCNNNNNNNGG	4 cut(s)	301, 970, 987, 1514
BsmAI	GTCTC	3 cut(s)	341, 680, 1305
BsmFI	GGGAC	3 cut(s)	468, 987, 1718
BsnI	GGCC	3 cut(s)	5, 37, 1128
Bsp1286I	GDGCHC	4 cut(s)	208, 638, 934, 1327
Bsp19I	CCATGG	2 cut(s)	381, 1392
BspACI	CCGC	4 cut(s)	30, 225, 1164, 1294
BspANI	GGCC	3 cut(s)	5, 37, 1128
BspCNI	CTCAG	5 cut(s)	607, 678, 1078, 1213, 1636
BspFNI	CGCG	1 cut(s)	430
BspHI	TCATGA	1 cut(s)	1969
BspMI	ACCTGC	1 cut(s)	1676
BspPI	GGATC	5 cut(s)	145, 560, 1328, 1499, 1974
BspTI	CTTAAG	1 cut(s)	1754
BsrBI	CCGCTC	1 cut(s)	32
BsrDI	GCAATG	5 cut(s)	291, 459, 465, 651, 1525
BsrFI	RCCGGY	1 cut(s)	77
BsrI	ACTGG	2 cut(s)	646, 694
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	6 cut(s)	38, 381, 1392, 1410, 1596, 1710
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	381, 1392, 1410
Bst2UI	CCWGG	3 cut(s)	459, 578, 1597
Bst4CI	ACNGT	7 cut(s)	58, 533, 725, 771, 1448, 1544, 1957
Bst6I	CTCTTC	1 cut(s)	678
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	1754
BstC8I	GCNNGC	2 cut(s)	204, 1239
BstDEI	CTNAG	7 cut(s)	615, 665, 735, 1086, 1221, 1644, 1928
BstDSI	CCRYGG	3 cut(s)	38, 381, 1392
BstF5I	GGATG	5 cut(s)	331, 880, 1063, 1775, 1813
BstFNI	CGCG	1 cut(s)	430
BstH2I	RGCGCY	1 cut(s)	708
BstHHI	GCGC	3 cut(s)	165, 430, 707
BstMAI	GTCTC	3 cut(s)	341, 680, 1305
BstMCI	CGRYCG	1 cut(s)	38
BstMWI	GCNNNNNNNGC	5 cut(s)	212, 236, 335, 713, 1091
BstNI	CCWGG	3 cut(s)	459, 578, 1597
BstNSI	RCATGY	4 cut(s)	202, 317, 702, 1241
BstSCI	CCNGG	3 cut(s)	457, 576, 1595
BstSLI	GKGCMC	2 cut(s)	638, 934
BstUI	CGCG	1 cut(s)	430
BstV1I	GCAGC	4 cut(s)	239, 350, 436, 568
BstV2I	GAAGAC	1 cut(s)	654
BstX2I	RGATCY	1 cut(s)	1504
BstYI	RGATCY	1 cut(s)	1504
BstZI	CGGCCG	1 cut(s)	35
BsuI	GTATCC	1 cut(s)	303
BsuRI	GGCC	3 cut(s)	5, 37, 1128
BtgI	CCRYGG	3 cut(s)	38, 381, 1392
BtgZI	GCGATG	1 cut(s)	1418
BtsCI	GGATG	5 cut(s)	331, 880, 1063, 1775, 1813
BtsIMutI	CAGTG	2 cut(s)	538, 855
BveI	ACCTGC	1 cut(s)	1676
Cac8I	GCNNGC	2 cut(s)	204, 1239
CciI	TCATGA	1 cut(s)	1969
CfoI	GCGC	3 cut(s)	165, 430, 707
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	1 cut(s)	1126
CseI	GACGC	1 cut(s)	35
Csp6I	GTAC	6 cut(s)	121, 520, 601, 827, 891, 1140
CviQI	GTAC	6 cut(s)	121, 520, 601, 827, 891, 1140
DdeI	CTNAG	7 cut(s)	615, 665, 735, 1086, 1221, 1644, 1928
DriI	GACNNNNNGTC	1 cut(s)	1546
EaeI	YGGCCR	2 cut(s)	3, 35
EagI	CGGCCG	1 cut(s)	35
Eam1104I	CTCTTC	1 cut(s)	678
Eam1105I	GACNNNNNGTC	1 cut(s)	1546
EarI	CTCTTC	1 cut(s)	678
EclXI	CGGCCG	1 cut(s)	35
Eco130I	CCWWGG	3 cut(s)	381, 1392, 1410
Eco47III	AGCGCT	1 cut(s)	706
Eco52I	CGGCCG	1 cut(s)	35
Eco57I	CTGAAG	1 cut(s)	1590
EcoO109I	RGGNCCY	1 cut(s)	1126
EcoRI	GAATTC	1 cut(s)	1624
EcoRII	CCWGG	3 cut(s)	457, 576, 1595
EcoT14I	CCWWGG	3 cut(s)	381, 1392, 1410
ErhI	CCWWGG	3 cut(s)	381, 1392, 1410
FalI	AAGNNNNNCTT	6 cut(s)	588, 620, 1248, 1280, 1779, 1811
FaqI	GGGAC	3 cut(s)	468, 987, 1718
FauI	CCCGC	1 cut(s)	1287
FbaI	TGATCA	3 cut(s)	1399, 1429, 1495
FblI	GTMKAC	2 cut(s)	60, 727
Fnu4HI	GCNGC	5 cut(s)	30, 228, 339, 450, 582
FokI	GGATG	5 cut(s)	338, 887, 1070, 1762, 1820
Fsp4HI	GCNGC	5 cut(s)	30, 228, 339, 450, 582
FspBI	CTAG	4 cut(s)	21, 543, 585, 1746
GlaI	GCGC	3 cut(s)	164, 429, 706
GluI	GCNGC	5 cut(s)	30, 228, 339, 450, 582
GsuI	CTGGAG	3 cut(s)	729, 984, 1392
HaeII	RGCGCY	1 cut(s)	708
HaeIII	GGCC	3 cut(s)	5, 37, 1128
HapII	CCGG	1 cut(s)	78
HgaI	GACGC	1 cut(s)	35
HhaI	GCGC	3 cut(s)	165, 430, 707
Hin1I	GRCGYC	1 cut(s)	27
Hin6I	GCGC	3 cut(s)	163, 428, 705
HinP1I	GCGC	3 cut(s)	163, 428, 705
HincII	GTYRAC	1 cut(s)	1561
HindII	GTYRAC	1 cut(s)	1561
HindIII	AAGCTT	1 cut(s)	1898
HinfI	GANTC	7 cut(s)	904, 1147, 1415, 1454, 1592, 1706, 1913
HpaII	CCGG	1 cut(s)	78
HphI	GGTGA	5 cut(s)	214, 1345, 1409, 1460, 1662
Hpy166II	GTNNAC	7 cut(s)	61, 121, 522, 728, 932, 1561, 1960
Hpy188III	TCNNGA	7 cut(s)	514, 985, 1001, 1371, 1680, 1868, 1970
Hpy8I	GTNNAC	7 cut(s)	61, 121, 522, 728, 932, 1561, 1960
Hpy99I	CGWCG	1 cut(s)	29
HpyAV	CCTTC	6 cut(s)	80, 97, 244, 364, 1782, 1977
HpyCH4III	ACNGT	7 cut(s)	58, 533, 725, 771, 1448, 1544, 1957
HpyCH4IV	ACGT	1 cut(s)	1864
HpyCH4V	TGCA	7 cut(s)	338, 452, 624, 910, 932, 1117, 1607
HpyF10VI	GCNNNNNNNGC	5 cut(s)	212, 236, 335, 713, 1091
HpyF3I	CTNAG	7 cut(s)	615, 665, 735, 1086, 1221, 1644, 1928
HpySE526I	ACGT	1 cut(s)	1864
Hsp92I	GRCGYC	1 cut(s)	27
HspAI	GCGC	3 cut(s)	163, 428, 705
Ksp22I	TGATCA	3 cut(s)	1399, 1429, 1495
LmnI	GCTCC	2 cut(s)	160, 1330
Lsp1109I	GCAGC	4 cut(s)	239, 350, 436, 568
LweI	GCATC	5 cut(s)	316, 865, 1089, 1175, 1366
MaeI	CTAG	4 cut(s)	21, 543, 585, 1746
MaeII	ACGT	1 cut(s)	1864
MaeIII	GTNAC	6 cut(s)	290, 356, 610, 853, 1028, 1192
MbiI	CCGCTC	1 cut(s)	32
MboII	GAAGA	8 cut(s)	199, 444, 659, 695, 1325, 1463, 1583, 1871
MflI	RGATCY	1 cut(s)	1504
MhlI	GDGCHC	4 cut(s)	208, 638, 934, 1327
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	7, 418, 476, 885, 1079, 1624, 1658, 1767
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	3 cut(s)	1141, 1409, 1700
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	2 cut(s)	1065, 1653
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	2 cut(s)	1308, 1489
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	341
MspCI	CTTAAG	1 cut(s)	1754
MspI	CCGG	1 cut(s)	78
MspR9I	CCNGG	3 cut(s)	459, 578, 1597
MvaI	CCWGG	3 cut(s)	459, 578, 1597
MvnI	CGCG	1 cut(s)	430
MwoI	GCNNNNNNNGC	5 cut(s)	212, 236, 335, 713, 1091
NcoI	CCATGG	2 cut(s)	381, 1392
NmeAIII	GCCGAG	2 cut(s)	13, 1918
NmuCI	GTSAC	4 cut(s)	290, 356, 853, 1192
NspI	RCATGY	4 cut(s)	202, 317, 702, 1241
PaeI	GCATGC	1 cut(s)	1241
PagI	TCATGA	1 cut(s)	1969
PciI	ACATGT	2 cut(s)	313, 698
PdmI	GAANNNNTTC	2 cut(s)	1065, 1653
PfeI	GAWTC	4 cut(s)	904, 1454, 1592, 1913
PkrI	GCNGC	5 cut(s)	31, 229, 340, 451, 583
PleI	GAGTC	3 cut(s)	1141, 1409, 1700
PpsI	GAGTC	3 cut(s)	1141, 1409, 1700
PscI	ACATGT	2 cut(s)	313, 698
Psp6I	CCWGG	3 cut(s)	457, 576, 1595
PspGI	CCWGG	3 cut(s)	457, 576, 1595
PspPI	GGNCC	1 cut(s)	1126
PsrI	GAACNNNNNNTAC	2 cut(s)	1594, 1626
PsuI	RGATCY	1 cut(s)	1504
PvuII	CAGCTG	1 cut(s)	341
RsaI	GTAC	6 cut(s)	122, 521, 602, 828, 892, 1141
RsaNI	GTAC	6 cut(s)	121, 520, 601, 827, 891, 1140
RseI	CAYNNNNRTG	2 cut(s)	1308, 1489
SatI	GCNGC	5 cut(s)	30, 228, 339, 450, 582
Sau96I	GGNCC	1 cut(s)	1126
ScaI	AGTACT	1 cut(s)	892
SchI	GAGTC	3 cut(s)	1141, 1409, 1700
ScrFI	CCNGG	3 cut(s)	459, 578, 1597
SduI	GDGCHC	4 cut(s)	208, 638, 934, 1327
SfaNI	GCATC	5 cut(s)	316, 865, 1089, 1175, 1366
SmiMI	CAYNNNNRTG	2 cut(s)	1308, 1489
SmlI	CTYRAG	1 cut(s)	1754
SmoI	CTYRAG	1 cut(s)	1754
SphI	GCATGC	1 cut(s)	1241
Sse9I	AATT	8 cut(s)	7, 418, 476, 885, 1079, 1624, 1658, 1767
SsiI	CCGC	4 cut(s)	30, 225, 1164, 1294
SspI	AATATT	2 cut(s)	1230, 1426
SspMI	CTAG	4 cut(s)	21, 543, 585, 1746
StyD4I	CCNGG	3 cut(s)	457, 576, 1595
StyI	CCWWGG	3 cut(s)	381, 1392, 1410
TaaI	ACNGT	7 cut(s)	58, 533, 725, 771, 1448, 1544, 1957
TaiI	ACGT	1 cut(s)	1867
TaqI	TCGA	6 cut(s)	299, 445, 790, 1217, 1679, 1823
TasI	AATT	8 cut(s)	7, 418, 476, 885, 1079, 1624, 1658, 1767
TatI	WGTACW	2 cut(s)	519, 890
TauI	GCSGC	1 cut(s)	32
TfiI	GAWTC	4 cut(s)	904, 1454, 1592, 1913
TscAI	CASTG	2 cut(s)	538, 862
TseFI	GTSAC	4 cut(s)	290, 356, 853, 1192
TseI	GCWGC	4 cut(s)	227, 338, 449, 581
Tsp45I	GTSAC	4 cut(s)	290, 356, 853, 1192
TspRI	CASTG	2 cut(s)	538, 862
Vha464I	CTTAAG	1 cut(s)	1754
VneI	GTGCAC	1 cut(s)	930
XapI	RAATTY	1 cut(s)	1624
XceI	RCATGY	4 cut(s)	202, 317, 702, 1241
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XmiI	GTMKAC	2 cut(s)	60, 727
XmnI	GAANNNNTTC	2 cut(s)	1065, 1653
XspI	CTAG	4 cut(s)	21, 543, 585, 1746
ZrmI	AGTACT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.