MD05G1184800.v1.1

monooxygenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
31306814 .. 31308517
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1184800.v1.1.491

Sequence Viewer

Length: 1272 bp
ATGGAGAACTTGTTTCGATTAGCGGATCATGAAGATTTCTTTGCTCGCCGTTGTATCATGATCAATGGTCCAGTCATAGTTGGGGCCGGACCATCAGGTTTGGCAACGGCAGCCTGTCTCAGAGACCAAGGAGTACCCTTTGTCGTCCTTGAGAGAGCCGAGTGCATAGCATCACTATGGCAAAAACGTACCTACGACAGGCTCAAACTTCACCTTCCAAAAGCATTTTGCCAACTCCCCAAGCTTCCATTCCCAGAAGACTTCCCTGAGTACCCAACAAAACGACAATTCATCGACTACCTTGAGTCATACGCAAAACACTTTGAGATCAACCCAAAGTTCAATTCCTGCGTTCAATCAGCAAGGTACGATGAGACAAGCGGTTTCTGGAGAGTCAAGACCGTTACCTCAACCGAGTCGACCCGGTCCGAGGTTGAGTATATTTGCAGGTGGCTCATAGTGGCCACAGGCGAAAATGCTGAGTGTGTCGTGCCAGAAATCGATGGCTTGTCGGAGTTTGGGGGTGAAGTTATTCACGCTTGTGAGTACAAGTCTGGTGAAAATTTCAGGGGAAAGAAAGTGCTTGTTGTTGGGTGTGGAAACTCCGGCATGGAAGTCTCTCTTGACCTCTGCAACCACAATGCCTTCCCATCAATGGTGGTTAGAAGTTCGGTTCATGTTATGCCTAGAGAAATCTTCGGAAGATCGACGTTCGAATTGGCGGTTTTCTTGTTAAAATGGCTTCCAGTTTGGTTGGCTGACAAGTTCCTGCTGATGTTTTCATGGTTAGTGCTCGGAAGCATTGAAAAATACGGGCTGAAAAGGCCATCCATGGGACCAATGGAGATGAAGAACGTTGAAGGAAAAACCCCTGTTTTGGACATTGGTGCATTGGGCAAAATCAAGTCCGGTGGAATTAAAGTTGTTCCTGGAATCAACAGGTTCTCAACCGGTCAAGTCGAGCTCGTCAATGGCGAAACCCTCGAAATCGACTCCATTGTTCTAGCCACCGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGATTTCTTCTCTAAGAATGGATTCCCAAAGCAGCCATTTCCCCACGGTTGGAAGGGAAACGCAGGACTTTATGCAGTAGGATTCACAAGGAGAGGGCTCAATGGTGCATCAAATGATGCCATGAGAATTGCACAAGACATTGGTAATGTGTGGAAAGGAGAAACCAAGCAGGTCAAAAAGAGAACCACAGCTTGCCATAGAAGATGCATTTCCCAGTTCTAA

Protein Analysis

424

Amino Acids

47.37

Weight (kDa)

8.72

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 25 - 224 4.8e-23 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 25 - 215 2.2e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 26 - 344 2.3e-29 Flavin-binding monooxygenase-like
Lys_Orn_oxgnase PF13434 90 - 215 1.8e-13 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 438
Acc36I ACCTGC 2 cut(s) 438, 1210
AccI GTMKAC 1 cut(s) 419
AciI CCGC 4 cut(s) 23, 381, 722, 1018
AclI AACGTT 1 cut(s) 855
AclWI GGATC 1 cut(s) 33
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 1 cut(s) 562
AcuI CTGAAG 1 cut(s) 1025
AfaI GTAC 5 cut(s) 135, 190, 272, 368, 548
AfiI CCNNNNNNNGG 6 cut(s) 198, 430, 655, 833, 877, 1098
AgeI ACCGGT 1 cut(s) 950
AgsI TTSAA 4 cut(s) 343, 356, 806, 860
AjnI CCWGG 1 cut(s) 928
AjuI GAANNNNNNNTTGG 4 cut(s) 233, 265, 328, 360
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 3 cut(s) 244, 964, 1241
AluI AGCT 3 cut(s) 244, 964, 1241
Alw21I GWGCWC 2 cut(s) 795, 966
Alw26I GTCTC 4 cut(s) 117, 122, 368, 622
AlwI GGATC 1 cut(s) 33
AoxI GGCC 3 cut(s) 84, 462, 824
ApeKI GCWGC 3 cut(s) 110, 1020, 1081
ApoI RAATTY 1 cut(s) 562
AsiGI ACCGGT 1 cut(s) 950
Asp700I GAANNNNTTC 2 cut(s) 531, 1070
AspS9I GGNCC 5 cut(s) 68, 84, 89, 426, 836
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 4 cut(s) 203, 536, 569, 1061
AsuII TTCGAA 1 cut(s) 714
AvaII GGWCC 4 cut(s) 68, 89, 426, 836
BalI TGGCCA 1 cut(s) 464
BanII GRGCYC 2 cut(s) 966, 1149
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 2 cut(s) 795, 966
BbvI GCAGC 3 cut(s) 122, 1032, 1093
BccI CCATC 4 cut(s) 100, 497, 658, 835
BceAI ACGGC 2 cut(s) 33, 123
BciT130I CCWGG 1 cut(s) 930
BciVI GTATCC 1 cut(s) 1007
BclI TGATCA 1 cut(s) 60
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 4 cut(s) 117, 122, 368, 622
BfaI CTAG 2 cut(s) 687, 1004
BfuAI ACCTGC 2 cut(s) 438, 1210
BfuI GTATCC 1 cut(s) 1007
BisI GCNGC 3 cut(s) 111, 1021, 1082
BlsI GCNGC 3 cut(s) 112, 1022, 1083
Bme1390I CCNGG 2 cut(s) 424, 930
Bme18I GGWCC 4 cut(s) 68, 89, 426, 836
BmgT120I GGNCC 5 cut(s) 68, 84, 89, 426, 836
BmiI GGNNCC 2 cut(s) 85, 837
BmrFI CCNGG 2 cut(s) 424, 930
BmrI ACTGGG 1 cut(s) 1258
BmsI GCATC 4 cut(s) 179, 1156, 1166, 1244
BmuI ACTGGG 1 cut(s) 1258
BpiI GAAGAC 1 cut(s) 264
BpmI CTGGAG 1 cut(s) 409
Bpu14I TTCGAA 1 cut(s) 714
BpuEI CTTGAG 2 cut(s) 170, 323
BpuMI CCSGG 1 cut(s) 424
Bsa29I ATCGAT 1 cut(s) 501
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 127, 429, 831, 1093
BsaWI WCCGGW 3 cut(s) 908, 950, 1010
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 6 cut(s) 198, 430, 655, 833, 877, 1098
Bse118I RCCGGY 1 cut(s) 950
Bse1I ACTGG 3 cut(s) 71, 746, 1264
Bse3DI GCAATG 1 cut(s) 1030
BseBI CCWGG 1 cut(s) 930
BseCI ATCGAT 1 cut(s) 501
BseDI CCNNGG 4 cut(s) 127, 429, 831, 1093
BseGI GGATG 1 cut(s) 827
BseLI CCNNNNNNNGG 6 cut(s) 198, 430, 655, 833, 877, 1098
BseMI GCAATG 1 cut(s) 1030
BseMII CTCAG 3 cut(s) 133, 258, 471
BseNI ACTGG 3 cut(s) 71, 746, 1264
BseXI GCAGC 3 cut(s) 122, 1032, 1093
BshFI GGCC 3 cut(s) 86, 464, 826
BshTI ACCGGT 1 cut(s) 950
BshVI ATCGAT 1 cut(s) 501
BsiHKAI GWGCWC 2 cut(s) 795, 966
BsiSI CCGG 6 cut(s) 87, 424, 606, 909, 951, 1011
BslFI GGGAC 2 cut(s) 849, 1013
BslI CCNNNNNNNGG 6 cut(s) 198, 430, 655, 833, 877, 1098
BsmAI GTCTC 4 cut(s) 117, 122, 368, 622
BsmFI GGGAC 2 cut(s) 849, 1013
BsnI GGCC 3 cut(s) 86, 464, 826
Bso31I GGTCTC 1 cut(s) 117
Bsp119I TTCGAA 1 cut(s) 714
Bsp1286I GDGCHC 3 cut(s) 795, 966, 1149
Bsp143I GATC 4 cut(s) 25, 60, 327, 704
Bsp19I CCATGG 1 cut(s) 831
BspACI CCGC 4 cut(s) 23, 381, 722, 1018
BspANI GGCC 3 cut(s) 86, 464, 826
BspCNI CTCAG 3 cut(s) 132, 259, 472
BspDI ATCGAT 1 cut(s) 501
BspHI TCATGA 2 cut(s) 28, 57
BspLI GGNNCC 2 cut(s) 85, 837
BspMI ACCTGC 2 cut(s) 438, 1210
BspPI GGATC 1 cut(s) 33
BspT104I TTCGAA 1 cut(s) 714
BspTNI GGTCTC 1 cut(s) 117
BsrDI GCAATG 1 cut(s) 1030
BsrFI RCCGGY 1 cut(s) 950
BsrI ACTGG 3 cut(s) 71, 746, 1264
BssAI RCCGGY 1 cut(s) 950
BssECI CCNNGG 4 cut(s) 127, 429, 831, 1093
BssMI GATC 4 cut(s) 25, 60, 327, 704
BssT1I CCWWGG 2 cut(s) 127, 831
Bst2UI CCWGG 1 cut(s) 930
Bst4CI ACNGT 2 cut(s) 403, 1097
BstBI TTCGAA 1 cut(s) 714
BstC8I GCNNGC 2 cut(s) 46, 1243
BstDEI CTNAG 4 cut(s) 119, 267, 480, 1062
BstDSI CCRYGG 2 cut(s) 831, 1093
BstENI CCTNNNNNAGG 1 cut(s) 196
BstF5I GGATG 1 cut(s) 827
BstKTI GATC 4 cut(s) 28, 63, 330, 707
BstMAI GTCTC 4 cut(s) 117, 122, 368, 622
BstMBI GATC 4 cut(s) 25, 60, 327, 704
BstMWI GCNNNNNNNGC 2 cut(s) 110, 823
BstNI CCWGG 1 cut(s) 930
BstSCI CCNGG 2 cut(s) 422, 928
BstV1I GCAGC 3 cut(s) 122, 1032, 1093
BstV2I GAAGAC 1 cut(s) 264
Bsu15I ATCGAT 1 cut(s) 501
BsuI GTATCC 1 cut(s) 1007
BsuRI GGCC 3 cut(s) 86, 464, 826
BsuTUI ATCGAT 1 cut(s) 501
BtgI CCRYGG 2 cut(s) 831, 1093
BtsCI GGATG 1 cut(s) 827
BveI ACCTGC 2 cut(s) 438, 1210
Cac8I GCNNGC 2 cut(s) 46, 1243
CciI TCATGA 2 cut(s) 28, 57
Cfr10I RCCGGY 1 cut(s) 950
Cfr13I GGNCC 5 cut(s) 68, 84, 89, 426, 836
ClaI ATCGAT 1 cut(s) 501
CpoI CGGWCCG 1 cut(s) 426
Csp6I GTAC 5 cut(s) 134, 189, 271, 367, 547
CspAI ACCGGT 1 cut(s) 950
CspCI CAANNNNNGTGG 2 cut(s) 892, 927
CspI CGGWCCG 1 cut(s) 426
CviAII CATG 7 cut(s) 29, 58, 610, 677, 783, 832, 1171
CviQI GTAC 5 cut(s) 134, 189, 271, 367, 547
DdeI CTNAG 4 cut(s) 119, 267, 480, 1062
DpnI GATC 4 cut(s) 27, 62, 329, 706
DpnII GATC 4 cut(s) 25, 60, 327, 704
EaeI YGGCCR 1 cut(s) 462
Ecl136II GAGCTC 1 cut(s) 964
Eco130I CCWWGG 2 cut(s) 127, 831
Eco24I GRGCYC 2 cut(s) 966, 1149
Eco31I GGTCTC 1 cut(s) 117
Eco47I GGWCC 4 cut(s) 68, 89, 426, 836
Eco53kI GAGCTC 1 cut(s) 964
Eco57I CTGAAG 1 cut(s) 1025
EcoICRI GAGCTC 1 cut(s) 964
EcoNI CCTNNNNNAGG 1 cut(s) 196
EcoRII CCWGG 1 cut(s) 928
EcoT14I CCWWGG 2 cut(s) 127, 831
EcoT22I ATGCAT 1 cut(s) 1259
EcoT38I GRGCYC 2 cut(s) 966, 1149
ErhI CCWWGG 2 cut(s) 127, 831
FaeI CATG 7 cut(s) 32, 61, 613, 680, 786, 835, 1174
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 2 cut(s) 849, 1013
FatI CATG 7 cut(s) 28, 57, 609, 676, 782, 831, 1170
FbaI TGATCA 1 cut(s) 60
FblI GTMKAC 1 cut(s) 419
Fnu4HI GCNGC 3 cut(s) 111, 1021, 1082
FokI GGATG 1 cut(s) 814
FriOI GRGCYC 2 cut(s) 966, 1149
Fsp4HI GCNGC 3 cut(s) 111, 1021, 1082
FspBI CTAG 2 cut(s) 687, 1004
GluI GCNGC 3 cut(s) 111, 1021, 1082
GsuI CTGGAG 1 cut(s) 409
HaeIII GGCC 3 cut(s) 86, 464, 826
HapII CCGG 6 cut(s) 87, 424, 606, 909, 951, 1011
Hin1II CATG 7 cut(s) 32, 61, 613, 680, 786, 835, 1174
HincII GTYRAC 1 cut(s) 420
HindII GTYRAC 1 cut(s) 420
HindIII AAGCTT 1 cut(s) 242
HinfI GANTC 7 cut(s) 305, 393, 416, 933, 992, 1071, 1131
HpaII CCGG 6 cut(s) 87, 424, 606, 909, 951, 1011
HphI GGTGA 4 cut(s) 203, 536, 569, 1061
Hpy166II GTNNAC 1 cut(s) 420
Hpy188I TCNGA 5 cut(s) 122, 430, 514, 701, 797
Hpy188III TCNNGA 6 cut(s) 29, 58, 388, 397, 623, 1043
Hpy8I GTNNAC 1 cut(s) 420
Hpy99I CGWCG 1 cut(s) 712
HpyAV CCTTC 6 cut(s) 224, 655, 854, 1040, 1041, 1096
HpyCH4III ACNGT 2 cut(s) 403, 1097
HpyCH4IV ACGT 3 cut(s) 187, 710, 855
HpyCH4V TGCA 8 cut(s) 165, 447, 633, 890, 1124, 1157, 1181, 1257
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 823
HpyF3I CTNAG 4 cut(s) 119, 267, 480, 1062
HpySE526I ACGT 3 cut(s) 187, 710, 855
Hsp92II CATG 7 cut(s) 32, 61, 613, 680, 786, 835, 1174
Ksp22I TGATCA 1 cut(s) 60
Kzo9I GATC 4 cut(s) 25, 60, 327, 704
Lsp1109I GCAGC 3 cut(s) 122, 1032, 1093
LweI GCATC 4 cut(s) 179, 1156, 1166, 1244
MaeI CTAG 2 cut(s) 687, 1004
MaeII ACGT 3 cut(s) 187, 710, 855
MaeIII GTNAC 1 cut(s) 403
MalI GATC 4 cut(s) 27, 62, 329, 706
MboI GATC 4 cut(s) 25, 60, 327, 704
MboII GAAGA 7 cut(s) 44, 269, 688, 714, 862, 1048, 1263
MhlI GDGCHC 3 cut(s) 795, 966, 1149
MlsI TGGCCA 1 cut(s) 464
MluCI AATT 6 cut(s) 287, 343, 562, 716, 915, 1176
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 4 cut(s) 314, 402, 425, 986
MmeI TCCRAC 2 cut(s) 492, 1079
MnlI CCTC 5 cut(s) 418, 424, 638, 992, 1136
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 1 cut(s) 1259
MroXI GAANNNNTTC 2 cut(s) 531, 1070
MscI TGGCCA 1 cut(s) 464
MseI TTAA 2 cut(s) 734, 918
MslI CAYNNNNRTG 2 cut(s) 175, 540
Msp20I TGGCCA 1 cut(s) 464
MspI CCGG 6 cut(s) 87, 424, 606, 909, 951, 1011
MspR9I CCNGG 2 cut(s) 424, 930
MvaI CCWGG 1 cut(s) 930
MwoI GCNNNNNNNGC 2 cut(s) 110, 823
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 1 cut(s) 831
NdeII GATC 4 cut(s) 25, 60, 327, 704
NlaIII CATG 7 cut(s) 32, 61, 613, 680, 786, 835, 1174
NlaIV GGNNCC 2 cut(s) 85, 837
NmeAIII GCCGAG 1 cut(s) 184
NsiI ATGCAT 1 cut(s) 1259
NspV TTCGAA 1 cut(s) 714
OliI CACNNNNGTG 1 cut(s) 540
PagI TCATGA 2 cut(s) 28, 57
PaqCI CACCTGC 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 972
PdmI GAANNNNTTC 2 cut(s) 531, 1070
PfeI GAWTC 3 cut(s) 933, 1071, 1131
PflFI GACNNNGTC 1 cut(s) 424
PfoI TCCNGGA 1 cut(s) 928
PinAI ACCGGT 1 cut(s) 950
PkrI GCNGC 3 cut(s) 112, 1022, 1083
PleI GAGTC 4 cut(s) 313, 401, 424, 986
PpsI GAGTC 4 cut(s) 313, 401, 424, 986
Psp124BI GAGCTC 1 cut(s) 966
Psp1406I AACGTT 1 cut(s) 855
Psp6I CCWGG 1 cut(s) 928
PspGI CCWGG 1 cut(s) 928
PspN4I GGNNCC 2 cut(s) 85, 837
PspPI GGNCC 5 cut(s) 68, 84, 89, 426, 836
PsyI GACNNNGTC 1 cut(s) 424
RsaI GTAC 5 cut(s) 135, 190, 272, 368, 548
RsaNI GTAC 5 cut(s) 134, 189, 271, 367, 547
RseI CAYNNNNRTG 2 cut(s) 175, 540
Rsr2I CGGWCCG 1 cut(s) 426
RsrII CGGWCCG 1 cut(s) 426
SacI GAGCTC 1 cut(s) 966
SalI GTCGAC 1 cut(s) 418
SaqAI TTAA 2 cut(s) 734, 918
SatI GCNGC 3 cut(s) 111, 1021, 1082
Sau3AI GATC 4 cut(s) 25, 60, 327, 704
Sau96I GGNCC 5 cut(s) 68, 84, 89, 426, 836
SchI GAGTC 4 cut(s) 314, 402, 425, 986
ScrFI CCNGG 2 cut(s) 424, 930
SduI GDGCHC 3 cut(s) 795, 966, 1149
SfaNI GCATC 4 cut(s) 179, 1156, 1166, 1244
SfuI TTCGAA 1 cut(s) 714
SinI GGWCC 4 cut(s) 68, 89, 426, 836
SmiMI CAYNNNNRTG 2 cut(s) 175, 540
SmlI CTYRAG 2 cut(s) 149, 302
SmoI CTYRAG 2 cut(s) 149, 302
Sse9I AATT 6 cut(s) 287, 343, 562, 716, 915, 1176
SsiI CCGC 4 cut(s) 23, 381, 722, 1018
SspMI CTAG 2 cut(s) 687, 1004
SstI GAGCTC 1 cut(s) 966
StyD4I CCNGG 2 cut(s) 422, 928
StyI CCWWGG 2 cut(s) 127, 831
TaaI ACNGT 2 cut(s) 403, 1097
TaiI ACGT 3 cut(s) 190, 713, 858
TaqI TCGA 9 cut(s) 16, 294, 419, 501, 707, 714, 960, 984, 990
TasI AATT 6 cut(s) 287, 343, 562, 716, 915, 1176
TatI WGTACW 1 cut(s) 546
TfiI GAWTC 3 cut(s) 933, 1071, 1131
Tru1I TTAA 2 cut(s) 734, 918
Tru9I TTAA 2 cut(s) 734, 918
TseI GCWGC 3 cut(s) 110, 1020, 1081
TspDTI ATGAA 5 cut(s) 45, 280, 665, 771, 863
Tth111I GACNNNGTC 1 cut(s) 424
VpaK11BI GGWCC 4 cut(s) 68, 89, 426, 836
XagI CCTNNNNNAGG 1 cut(s) 196
XapI RAATTY 1 cut(s) 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmiI GTMKAC 1 cut(s) 419
XmnI GAANNNNTTC 2 cut(s) 531, 1070
XspI CTAG 2 cut(s) 687, 1004
Zsp2I ATGCAT 1 cut(s) 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.