MD10G1172800.v1.1

monooxygenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
26514039 .. 26515625
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1172800.v1.1.491

Sequence Viewer

Length: 1272 bp
ATGGAGAACTTGTTTCGATTAGCTGATCCTGAAGATTTCTTCGCTCGCCGTTGCATCATGGTTAATGGTCCAATCATAGTTGGAGCGGGACCATCAGGTCTGGCAACGGCGGCCTGCCTCAGAGACCAAGGAGTACCCTTTGTTGTCTTTGAGAGGGCCGAGTGCATAGCATCGCTTTGGCAAAAACGCACCTACGACAGGCTCAAACTTCACCTTCCAAAGGCATTTTGCCAACTCCCAAAGTTTCCATTCCCAGAAGACTTCCCTGAGTACCCAACAAAAAGACAATTCATCGACTACCTTGAGTCATACGCAAAACACTTTGAGATCAACCCAAAGTTCAACTTCTGCGTTCAATCCGCAAGGTACGATGAGACAAGCGGTTTCTGGAGAGTCAAGTCCGTTACCTCAACCGAGTCGACCCGGTCTGAGGTTGAGTACATTTGCAGGTGGCTCATCGTTGCCACCGGCGAAAATGCCGAGTGTGTCGTGCCAGAAATCAACGGCTTGTCGGAGTTTGGAGCTGAAGTTATGCACGCGTGTGAGTACAAGTCCGGTGAAAATTTCAGGGGAAAGAAAGTACTTGTTGTTGGGTGTGGAAACTCCGGCATGGAAGTCTCTCTTGACCTCTGCAACCACAATGCCTTCCCATCAATGGTGGTTAGAAGCTCGGTTCATGTTATGCCTAGAGAAATCTTTGGAAAATCAACGTTCGAATTGGCGGTTTTCTTGCTAAAATGGCTGCCAGTTTGGTTGGCTGACAAGTTGCTCCTGATGCTTTCATGGTTGGTGCTGGGAAGCATTGAAAAATACGGGCTGAAAAGGCCATCCATGGGACCAATGGAGATGAAGAACGTTGAAGGAAAAACCCCTGTTTTGGAGATTGGTGCATTGGACAAAATCAAGTCCGGTGGAATTAAAGTTGTTCCCGGAATCAAGAGGTTCTCCCCCGGTCAAGTTGAGCTCGTTAACGGCGAAACCCTCGAAATCGACTCTGTTGTTCTAGCCACCGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGATTTCTTCTCTAAGAATGGATTCCCAAAGCAGCCATTCCCCCATGGTTGGAAGGGAAATGCAGGACTTTATGCAGTAGGGTTCACAAGGAGAGGGCTCAGTGGTGCATCAAATGATGCCATGAGAATTGCTCAAGATATTGGCAATGTGTGGAAAGGAGAAACCAAACAGGTCCAAAAGAGAACCACAGCTTGCCATAGAAGATGCATTTCCCAGTTCTAA

Protein Analysis

424

Amino Acids

47.42

Weight (kDa)

8.72

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 25 - 224 1e-21 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 25 - 215 3.8e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 26 - 344 3.2e-31 Flavin-binding monooxygenase-like
NAD_binding_8 PF13450 26 - 62 1e-05 NAD(P)-binding Rossmann-like domain
Lys_Orn_oxgnase PF13434 90 - 215 4.4e-13 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 438
AasI GACNNNNNNGTC 1 cut(s) 96
Acc36I ACCTGC 1 cut(s) 438
AccBSI CCGCTC 1 cut(s) 86
AccI GTMKAC 1 cut(s) 419
AccII CGCG 1 cut(s) 539
AciI CCGC 6 cut(s) 86, 110, 360, 381, 722, 1018
AclI AACGTT 2 cut(s) 710, 855
AclWI GGATC 1 cut(s) 20
AcsI RAATTY 1 cut(s) 562
AcuI CTGAAG 3 cut(s) 51, 546, 1025
AfaI GTAC 6 cut(s) 135, 272, 368, 440, 548, 582
AfiI CCNNNNNNNGG 7 cut(s) 198, 220, 430, 655, 833, 877, 1098
AflIII ACRYGT 1 cut(s) 537
AgsI TTSAA 4 cut(s) 343, 356, 806, 860
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 5 cut(s) 23, 524, 669, 964, 1241
AluI AGCT 5 cut(s) 23, 524, 669, 964, 1241
Alw21I GWGCWC 1 cut(s) 966
Alw26I GTCTC 3 cut(s) 117, 368, 622
AlwI GGATC 1 cut(s) 20
AoxI GGCC 3 cut(s) 111, 156, 824
ApeKI GCWGC 3 cut(s) 742, 1020, 1081
ApoI RAATTY 1 cut(s) 562
Asp700I GAANNNNTTC 1 cut(s) 1070
AspS9I GGNCC 5 cut(s) 68, 89, 156, 836, 1222
AsuC2I CCSGG 3 cut(s) 424, 930, 951
AsuHPI GGTGA 3 cut(s) 203, 569, 1061
AsuII TTCGAA 1 cut(s) 714
AvaII GGWCC 4 cut(s) 68, 89, 836, 1222
BanII GRGCYC 2 cut(s) 966, 1149
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 1 cut(s) 966
BbvI GCAGC 3 cut(s) 729, 1032, 1093
BccI CCATC 3 cut(s) 100, 658, 835
BceAI ACGGC 4 cut(s) 33, 123, 520, 988
BciVI GTATCC 1 cut(s) 1007
BcnI CCSGG 3 cut(s) 424, 930, 951
BcoDI GTCTC 3 cut(s) 117, 368, 622
BfaI CTAG 2 cut(s) 687, 1004
BfuAI ACCTGC 1 cut(s) 438
BfuI GTATCC 1 cut(s) 1007
BisI GCNGC 4 cut(s) 111, 743, 1021, 1082
BlsI GCNGC 4 cut(s) 112, 744, 1022, 1083
BmcAI AGTACT 1 cut(s) 582
Bme1390I CCNGG 3 cut(s) 424, 930, 951
Bme18I GGWCC 4 cut(s) 68, 89, 836, 1222
BmgT120I GGNCC 5 cut(s) 68, 89, 156, 836, 1222
BmiI GGNNCC 2 cut(s) 90, 837
BmrFI CCNGG 3 cut(s) 424, 930, 951
BmrI ACTGGG 1 cut(s) 1258
BmsI GCATC 6 cut(s) 63, 179, 765, 1156, 1166, 1244
BmuI ACTGGG 1 cut(s) 1258
BpiI GAAGAC 1 cut(s) 264
BplI GAGNNNNNCTC 2 cut(s) 1165, 1197
BpmI CTGGAG 1 cut(s) 409
Bpu14I TTCGAA 1 cut(s) 714
BpuEI CTTGAG 2 cut(s) 323, 1167
BpuMI CCSGG 3 cut(s) 424, 930, 951
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 4 cut(s) 127, 831, 949, 1093
BsaWI WCCGGW 3 cut(s) 554, 908, 1010
BsaXI ACNNNNNCTCC 3 cut(s) 26, 513, 543
Bsc4I CCNNNNNNNGG 7 cut(s) 198, 220, 430, 655, 833, 877, 1098
Bse118I RCCGGY 1 cut(s) 467
Bse1I ACTGG 2 cut(s) 746, 1264
Bse3DI GCAATG 2 cut(s) 1030, 1201
BseDI CCNNGG 4 cut(s) 127, 831, 949, 1093
BseGI GGATG 1 cut(s) 827
BseLI CCNNNNNNNGG 7 cut(s) 198, 220, 430, 655, 833, 877, 1098
BseMI GCAATG 2 cut(s) 1030, 1201
BseMII CTCAG 4 cut(s) 133, 258, 420, 1162
BseNI ACTGG 2 cut(s) 746, 1264
BseXI GCAGC 3 cut(s) 729, 1032, 1093
BseYI CCCAGC 1 cut(s) 793
Bsh1236I CGCG 1 cut(s) 539
BshFI GGCC 3 cut(s) 113, 158, 826
BsiHKAI GWGCWC 1 cut(s) 966
BsiSI CCGG 8 cut(s) 424, 468, 555, 606, 909, 930, 951, 1011
BslFI GGGAC 3 cut(s) 102, 849, 1013
BslI CCNNNNNNNGG 7 cut(s) 198, 220, 430, 655, 833, 877, 1098
BsmAI GTCTC 3 cut(s) 117, 368, 622
BsmFI GGGAC 3 cut(s) 102, 849, 1013
BsnI GGCC 3 cut(s) 113, 158, 826
Bso31I GGTCTC 1 cut(s) 117
Bsp119I TTCGAA 1 cut(s) 714
Bsp1286I GDGCHC 2 cut(s) 966, 1149
Bsp143I GATC 2 cut(s) 25, 327
Bsp19I CCATGG 2 cut(s) 831, 1093
BspACI CCGC 6 cut(s) 86, 110, 360, 381, 722, 1018
BspANI GGCC 3 cut(s) 113, 158, 826
BspCNI CTCAG 4 cut(s) 132, 259, 421, 1161
BspFNI CGCG 1 cut(s) 539
BspLI GGNNCC 2 cut(s) 90, 837
BspMI ACCTGC 1 cut(s) 438
BspPI GGATC 1 cut(s) 20
BspT104I TTCGAA 1 cut(s) 714
BspTNI GGTCTC 1 cut(s) 117
BsrBI CCGCTC 1 cut(s) 86
BsrDI GCAATG 2 cut(s) 1030, 1201
BsrFI RCCGGY 1 cut(s) 467
BsrI ACTGG 2 cut(s) 746, 1264
BssAI RCCGGY 1 cut(s) 467
BssECI CCNNGG 4 cut(s) 127, 831, 949, 1093
BssMI GATC 2 cut(s) 25, 327
BssT1I CCWWGG 3 cut(s) 127, 831, 1093
BstBI TTCGAA 1 cut(s) 714
BstC8I GCNNGC 4 cut(s) 46, 115, 537, 1243
BstDEI CTNAG 5 cut(s) 119, 267, 429, 1062, 1148
BstDSI CCRYGG 2 cut(s) 831, 1093
BstENI CCTNNNNNAGG 2 cut(s) 196, 218
BstF5I GGATG 1 cut(s) 827
BstFNI CGCG 1 cut(s) 539
BstKTI GATC 2 cut(s) 28, 330
BstMAI GTCTC 3 cut(s) 117, 368, 622
BstMBI GATC 2 cut(s) 25, 327
BstMWI GCNNNNNNNGC 4 cut(s) 110, 739, 775, 823
BstSCI CCNGG 3 cut(s) 422, 928, 949
BstUI CGCG 1 cut(s) 539
BstV1I GCAGC 3 cut(s) 729, 1032, 1093
BstV2I GAAGAC 1 cut(s) 264
BsuI GTATCC 1 cut(s) 1007
BsuRI GGCC 3 cut(s) 113, 158, 826
BtgI CCRYGG 2 cut(s) 831, 1093
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 1 cut(s) 827
BtsIMutI CAGTG 1 cut(s) 1156
BveI ACCTGC 1 cut(s) 438
Cac8I GCNNGC 4 cut(s) 46, 115, 537, 1243
Cfr10I RCCGGY 1 cut(s) 467
Cfr13I GGNCC 5 cut(s) 68, 89, 156, 836, 1222
Csp6I GTAC 6 cut(s) 134, 271, 367, 439, 547, 581
CspCI CAANNNNNGTGG 2 cut(s) 892, 927
CviAII CATG 7 cut(s) 58, 610, 677, 783, 832, 1094, 1171
CviQI GTAC 6 cut(s) 134, 271, 367, 439, 547, 581
DdeI CTNAG 5 cut(s) 119, 267, 429, 1062, 1148
DpnI GATC 2 cut(s) 27, 329
DpnII GATC 2 cut(s) 25, 327
DrdI GACNNNNNNGTC 1 cut(s) 96
DseDI GACNNNNNNGTC 1 cut(s) 96
Ecl136II GAGCTC 1 cut(s) 964
Eco130I CCWWGG 3 cut(s) 127, 831, 1093
Eco24I GRGCYC 2 cut(s) 966, 1149
Eco31I GGTCTC 1 cut(s) 117
Eco47I GGWCC 4 cut(s) 68, 89, 836, 1222
Eco53kI GAGCTC 1 cut(s) 964
Eco57I CTGAAG 3 cut(s) 51, 546, 1025
EcoICRI GAGCTC 1 cut(s) 964
EcoNI CCTNNNNNAGG 2 cut(s) 196, 218
EcoT14I CCWWGG 3 cut(s) 127, 831, 1093
EcoT22I ATGCAT 1 cut(s) 1259
EcoT38I GRGCYC 2 cut(s) 966, 1149
ErhI CCWWGG 3 cut(s) 127, 831, 1093
FaeI CATG 7 cut(s) 61, 613, 680, 786, 835, 1097, 1174
FalI AAGNNNNNCTT 4 cut(s) 329, 361, 606, 638
FaqI GGGAC 3 cut(s) 102, 849, 1013
FatI CATG 7 cut(s) 57, 609, 676, 782, 831, 1093, 1170
FauI CCCGC 1 cut(s) 79
FblI GTMKAC 1 cut(s) 419
Fnu4HI GCNGC 4 cut(s) 111, 743, 1021, 1082
FokI GGATG 1 cut(s) 814
FriOI GRGCYC 2 cut(s) 966, 1149
Fsp4HI GCNGC 4 cut(s) 111, 743, 1021, 1082
FspBI CTAG 2 cut(s) 687, 1004
GluI GCNGC 4 cut(s) 111, 743, 1021, 1082
GsaI CCCAGC 1 cut(s) 797
GsuI CTGGAG 1 cut(s) 409
HaeIII GGCC 3 cut(s) 113, 158, 826
HapII CCGG 8 cut(s) 424, 468, 555, 606, 909, 930, 951, 1011
Hin1II CATG 7 cut(s) 61, 613, 680, 786, 835, 1097, 1174
HincII GTYRAC 2 cut(s) 420, 970
HindII GTYRAC 2 cut(s) 420, 970
HinfI GANTC 6 cut(s) 305, 393, 416, 933, 992, 1071
HpaI GTTAAC 1 cut(s) 970
HpaII CCGG 8 cut(s) 424, 468, 555, 606, 909, 930, 951, 1011
HphI GGTGA 3 cut(s) 203, 569, 1061
Hpy166II GTNNAC 3 cut(s) 420, 970, 1134
Hpy188I TCNGA 3 cut(s) 122, 430, 514
Hpy188III TCNNGA 7 cut(s) 29, 388, 623, 772, 937, 1043, 1184
Hpy8I GTNNAC 3 cut(s) 420, 970, 1134
HpyAV CCTTC 6 cut(s) 224, 655, 854, 1040, 1041, 1096
HpyCH4IV ACGT 2 cut(s) 710, 855
HpyF10VI GCNNNNNNNGC 4 cut(s) 110, 739, 775, 823
HpyF3I CTNAG 5 cut(s) 119, 267, 429, 1062, 1148
HpySE526I ACGT 2 cut(s) 710, 855
Hsp92II CATG 7 cut(s) 61, 613, 680, 786, 835, 1097, 1174
KspAI GTTAAC 1 cut(s) 970
Kzo9I GATC 2 cut(s) 25, 327
LmnI GCTCC 3 cut(s) 83, 521, 774
Lsp1109I GCAGC 3 cut(s) 729, 1032, 1093
LweI GCATC 6 cut(s) 63, 179, 765, 1156, 1166, 1244
MaeI CTAG 2 cut(s) 687, 1004
MaeII ACGT 2 cut(s) 710, 855
MaeIII GTNAC 1 cut(s) 403
MalI GATC 2 cut(s) 27, 329
MbiI CCGCTC 1 cut(s) 86
MboI GATC 2 cut(s) 25, 327
MboII GAAGA 6 cut(s) 31, 44, 269, 862, 1048, 1263
MhlI GDGCHC 2 cut(s) 966, 1149
MluCI AATT 5 cut(s) 287, 562, 716, 915, 1176
MluI ACGCGT 1 cut(s) 537
MlyI GAGTC 4 cut(s) 314, 402, 425, 986
MmeI TCCRAC 3 cut(s) 61, 492, 1079
MnlI CCTC 8 cut(s) 128, 147, 418, 424, 638, 933, 992, 1136
Mph1103I ATGCAT 1 cut(s) 1259
MroXI GAANNNNTTC 1 cut(s) 1070
MseI TTAA 3 cut(s) 63, 918, 969
MslI CAYNNNNRTG 1 cut(s) 540
MspI CCGG 8 cut(s) 424, 468, 555, 606, 909, 930, 951, 1011
MspR9I CCNGG 3 cut(s) 424, 930, 951
MvnI CGCG 1 cut(s) 539
MwoI GCNNNNNNNGC 4 cut(s) 110, 739, 775, 823
NciI CCSGG 3 cut(s) 424, 930, 951
NcoI CCATGG 2 cut(s) 831, 1093
NdeII GATC 2 cut(s) 25, 327
NlaIII CATG 7 cut(s) 61, 613, 680, 786, 835, 1097, 1174
NlaIV GGNNCC 2 cut(s) 90, 837
NmeAIII GCCGAG 2 cut(s) 184, 505
NsiI ATGCAT 1 cut(s) 1259
NspV TTCGAA 1 cut(s) 714
OliI CACNNNNGTG 1 cut(s) 540
PaqCI CACCTGC 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 972
PdmI GAANNNNTTC 1 cut(s) 1070
PfeI GAWTC 2 cut(s) 933, 1071
PflFI GACNNNGTC 1 cut(s) 424
PfoI TCCNGGA 1 cut(s) 928
PkrI GCNGC 4 cut(s) 112, 744, 1022, 1083
PleI GAGTC 4 cut(s) 313, 401, 424, 986
PpsI GAGTC 4 cut(s) 313, 401, 424, 986
Psp124BI GAGCTC 1 cut(s) 966
Psp1406I AACGTT 2 cut(s) 710, 855
PspFI CCCAGC 1 cut(s) 793
PspN4I GGNNCC 2 cut(s) 90, 837
PspPI GGNCC 5 cut(s) 68, 89, 156, 836, 1222
PsyI GACNNNGTC 1 cut(s) 424
RsaI GTAC 6 cut(s) 135, 272, 368, 440, 548, 582
RsaNI GTAC 6 cut(s) 134, 271, 367, 439, 547, 581
RseI CAYNNNNRTG 1 cut(s) 540
SacI GAGCTC 1 cut(s) 966
SalI GTCGAC 1 cut(s) 418
SaqAI TTAA 3 cut(s) 63, 918, 969
SatI GCNGC 4 cut(s) 111, 743, 1021, 1082
Sau3AI GATC 2 cut(s) 25, 327
Sau96I GGNCC 5 cut(s) 68, 89, 156, 836, 1222
ScaI AGTACT 1 cut(s) 582
SchI GAGTC 4 cut(s) 314, 402, 425, 986
ScrFI CCNGG 3 cut(s) 424, 930, 951
SduI GDGCHC 2 cut(s) 966, 1149
SfaNI GCATC 6 cut(s) 63, 179, 765, 1156, 1166, 1244
SfuI TTCGAA 1 cut(s) 714
SgrAI CRCCGGYG 1 cut(s) 467
SinI GGWCC 4 cut(s) 68, 89, 836, 1222
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 2 cut(s) 302, 1182
SmoI CTYRAG 2 cut(s) 302, 1182
Sse9I AATT 5 cut(s) 287, 562, 716, 915, 1176
SsiI CCGC 6 cut(s) 86, 110, 360, 381, 722, 1018
SspMI CTAG 2 cut(s) 687, 1004
SstI GAGCTC 1 cut(s) 966
StyD4I CCNGG 3 cut(s) 422, 928, 949
StyI CCWWGG 3 cut(s) 127, 831, 1093
TaiI ACGT 2 cut(s) 713, 858
TaqI TCGA 6 cut(s) 16, 294, 419, 714, 984, 990
TasI AATT 5 cut(s) 287, 562, 716, 915, 1176
TatI WGTACW 3 cut(s) 438, 546, 580
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 2 cut(s) 933, 1071
Tru1I TTAA 3 cut(s) 63, 918, 969
Tru9I TTAA 3 cut(s) 63, 918, 969
TscAI CASTG 1 cut(s) 1156
TseI GCWGC 3 cut(s) 742, 1020, 1081
TspDTI ATGAA 4 cut(s) 280, 665, 771, 863
TspGWI ACGGA 1 cut(s) 391
TspRI CASTG 1 cut(s) 1156
Tth111I GACNNNGTC 1 cut(s) 424
VpaK11BI GGWCC 4 cut(s) 68, 89, 836, 1222
XagI CCTNNNNNAGG 2 cut(s) 196, 218
XapI RAATTY 1 cut(s) 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 838
XmiI GTMKAC 1 cut(s) 419
XmnI GAANNNNTTC 1 cut(s) 1070
XspI CTAG 2 cut(s) 687, 1004
ZrmI AGTACT 1 cut(s) 582
Zsp2I ATGCAT 1 cut(s) 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.