MD05G1208500.v1.1

cellular response to glucose starvation

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
34017791 .. 34023475
5685 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1208500.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGGGTAATAAGCTCGGAAGAAGGAGACAGGTGATTGATGAGAAATACACAAGGCCTCAGGGGCTTTACCACCACAAAGATGTGGATCATAAGAAACTGAAGAAGCTCATACTTGAGTCCAAGCTTGCTCCTTGCTATCCTGGAGATGAAGAATGCACTTTTGATCATGAAGAATGTCCAATTTGCTTTCTGTATTATCCAAGTCTTAACCGATCAAGATGCTGCATGAAAGGCATCTGTACAGAGTGTTTCCTGCAGATGAAAGTTCCTAATTCAACTCGTCCTACGCAGTGCCCTTTTTGTAAAACCACCAATTATGCTGTGGAGTTCCGTGGTGTGAAAACAAAGGAAGAGAAGGGTCTGGAGCAAATTGAAGAACAAAGAGTCATAGAAGCAAAAATTAGGATGCGGCAGCAAGAACTTCAGGATGAAGAAGAAAGAATGCAGAAAAGACAAATAAGCTCTCCAAGAAGAAGCATGGCACCAGTGGAAGATGAATACAGCTCAGTAACCGTTCGATCCTCCACTTCTCCAGAAGAAGGAGAGGAAATAGTTCCTTCTCAAGATTCATGTGCTGTGTCAATGTGTACCCAACCGCCACCTCCAAGAGTGTACAGGGAGGATGAATTCGATCTGGATCTTGAGGAAATAATGGTCATGGAAGCAGTTTGGCTTTCTATTCAGGAGAATGGGAGACATAAGTCTCCATCTTACGTAGATGCTGCTCCGTCTGAACAATTTGTCACGAGACAAAACCTTGTCTCACAAGCCATGGCTTCAGTTTCCGGTTCATCTTCACCATCGGGGGGTCTTGCCTGTGCAATAGCTGCCCTTGCGGAACGACAGCAAACGAGTGGAGAATCCTCCACTAGTCCTGGCGGCAATGTGTCGGGGGTTAGTATGGTTCCTGGCAGTAGCAGGTTTTCCAACAGGGTGGACAGAGAACCCGGGAATTATCAAACTGCAGTGACCTCTTCTGAAATGTCAATCAATCACAGGATGGCTTCGACGCAGGATGACAGAGAATGGAATGTTGACACTACACGGACGAGTTATGCAAGTTCCGACACAACAGAAGATGTTGGAAGTACATCTGCCCCACCAACGGGGAGTGAGATTGAGGGCGATCTTCAAAATGCCCCAGGCCCTATTGTTCCCGAGAGTTTTGAGGAGCAGATGATGCTGGCCATGGCCGTTTCACTGGCTGAGGCTAGAGCCGCGGCCAGTGGACCTGGAGTTTCCTGGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

417

Amino Acids

46.13

Weight (kDa)

4.99

Isoelectric Point (pI)

77.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 909
AccB1I GGYRCC 1 cut(s) 481
AccII CGCG 1 cut(s) 1220
AciI CCGC 6 cut(s) 409, 596, 836, 879, 1218, 1220
AclWI GGATC 3 cut(s) 93, 513, 645
AcoI YGGCCR 3 cut(s) 1185, 1191, 1221
AcsI RAATTY 1 cut(s) 626
AcuI CTGAAG 3 cut(s) 119, 407, 762
AfaI GTAC 4 cut(s) 241, 589, 614, 1090
AfiI CCNNNNNNNGG 4 cut(s) 539, 806, 1105, 1106
AgsI TTSAA 3 cut(s) 276, 374, 1133
AhlI ACTAGT 1 cut(s) 869
AjnI CCWGG 6 cut(s) 139, 874, 907, 1141, 1231, 1241
AluBI AGCT 6 cut(s) 13, 106, 124, 462, 504, 827
AluI AGCT 6 cut(s) 13, 106, 124, 462, 504, 827
Alw26I GTCTC 5 cut(s) 19, 688, 708, 742, 766
AlwI GGATC 3 cut(s) 93, 513, 645
Ama87I CYCGRG 2 cut(s) 947, 1157
AoxI GGCC 5 cut(s) 53, 1144, 1185, 1191, 1221
ApeKI GCWGC 4 cut(s) 222, 412, 722, 827
ApoI RAATTY 1 cut(s) 626
Asp700I GAANNNNTTC 1 cut(s) 552
AspS9I GGNCC 2 cut(s) 1145, 1229
AsuC2I CCSGG 2 cut(s) 948, 949
AsuHPI GGTGA 2 cut(s) 43, 789
AvaI CYCGRG 2 cut(s) 947, 1157
AvaII GGWCC 1 cut(s) 1229
AxyI CCTNAGG 1 cut(s) 57
BaeGI GKGCMC 1 cut(s) 296
BalI TGGCCA 1 cut(s) 1187
BanI GGYRCC 1 cut(s) 481
BauI CACGAG 1 cut(s) 745
BbvCI CCTCAGC 1 cut(s) 1206
BbvI GCAGC 4 cut(s) 209, 424, 709, 814
BccI CCATC 3 cut(s) 715, 808, 994
BceAI ACGGC 1 cut(s) 1178
BcgI CGANNNNNNTGC 2 cut(s) 201, 235
BciT130I CCWGG 6 cut(s) 141, 876, 909, 1143, 1233, 1243
BclI TGATCA 1 cut(s) 163
BcnI CCSGG 2 cut(s) 948, 949
BcoDI GTCTC 5 cut(s) 19, 688, 708, 742, 766
BcuI ACTAGT 1 cut(s) 869
BfaI CTAG 2 cut(s) 870, 1212
BfmI CTRYAG 2 cut(s) 254, 963
BfuAI ACCTGC 1 cut(s) 909
BglI GCCNNNNNGGC 1 cut(s) 61
BisI GCNGC 8 cut(s) 223, 410, 413, 723, 828, 880, 1218, 1221
BlsI GCNGC 8 cut(s) 224, 411, 414, 724, 829, 881, 1219, 1222
Bme1390I CCNGG 8 cut(s) 141, 876, 909, 948, 949, 1143, 1233, 1243
Bme18I GGWCC 1 cut(s) 1229
BmeT110I CYCGRG 2 cut(s) 947, 1157
BmgT120I GGNCC 2 cut(s) 1145, 1229
BmiI GGNNCC 2 cut(s) 483, 906
BmrFI CCNGG 8 cut(s) 141, 876, 909, 948, 949, 1143, 1233, 1243
BmsI GCATC 5 cut(s) 209, 243, 396, 709, 1170
BoxI GACNNNNGTC 1 cut(s) 700
BpmI CTGGAG 3 cut(s) 162, 383, 516
Bpu10I CCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 3 cut(s) 134, 546, 662
BpuMI CCSGG 2 cut(s) 948, 949
BsaAI YACGTR 1 cut(s) 715
BsaBI GATNNNNATC 2 cut(s) 84, 636
BsaJI CCNNGG 6 cut(s) 331, 771, 947, 1141, 1188, 1218
BsaWI WCCGGW 1 cut(s) 785
Bsc4I CCNNNNNNNGG 4 cut(s) 539, 806, 1105, 1106
Bse1I ACTGG 3 cut(s) 485, 1206, 1224
Bse21I CCTNAGG 1 cut(s) 57
Bse3DI GCAATG 1 cut(s) 889
Bse8I GATNNNNATC 2 cut(s) 84, 636
BseBI CCWGG 6 cut(s) 141, 876, 909, 1143, 1233, 1243
BseDI CCNNGG 6 cut(s) 331, 771, 947, 1141, 1188, 1218
BseGI GGATG 5 cut(s) 411, 433, 628, 1005, 1021
BseJI GATNNNNATC 2 cut(s) 84, 636
BseLI CCNNNNNNNGG 4 cut(s) 539, 806, 1105, 1106
BseMI GCAATG 1 cut(s) 889
BseMII CTCAG 3 cut(s) 71, 519, 1197
BseNI ACTGG 3 cut(s) 485, 1206, 1224
BseRI GAGGAG 1 cut(s) 1184
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 4 cut(s) 209, 424, 709, 814
Bsh1236I CGCG 1 cut(s) 1220
BshFI GGCC 5 cut(s) 55, 1146, 1187, 1193, 1223
BshNI GGYRCC 1 cut(s) 481
BsiHKCI CYCGRG 2 cut(s) 947, 1157
BsiSI CCGG 2 cut(s) 786, 948
BslI CCNNNNNNNGG 4 cut(s) 539, 806, 1105, 1106
BsmAI GTCTC 5 cut(s) 19, 688, 708, 742, 766
BsmI GAATGC 2 cut(s) 158, 447
BsnI GGCC 5 cut(s) 55, 1146, 1187, 1193, 1223
BsoBI CYCGRG 2 cut(s) 947, 1157
Bsp1286I GDGCHC 1 cut(s) 296
Bsp1407I TGTACA 2 cut(s) 239, 612
Bsp143I GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
Bsp19I CCATGG 2 cut(s) 771, 1188
BspACI CCGC 6 cut(s) 409, 596, 836, 879, 1218, 1220
BspANI GGCC 5 cut(s) 55, 1146, 1187, 1193, 1223
BspCNI CTCAG 3 cut(s) 70, 518, 1198
BspFNI CGCG 1 cut(s) 1220
BspHI TCATGA 1 cut(s) 166
BspLI GGNNCC 2 cut(s) 483, 906
BspMAI CTGCAG 2 cut(s) 258, 967
BspMI ACCTGC 1 cut(s) 909
BspPI GGATC 3 cut(s) 93, 513, 645
BspT107I GGYRCC 1 cut(s) 481
BsrDI GCAATG 1 cut(s) 889
BsrGI TGTACA 2 cut(s) 239, 612
BsrI ACTGG 3 cut(s) 485, 1206, 1224
BssECI CCNNGG 6 cut(s) 331, 771, 947, 1141, 1188, 1218
BssMI GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
BssSI CACGAG 1 cut(s) 745
BssT1I CCWWGG 2 cut(s) 771, 1188
Bst2BI CACGAG 1 cut(s) 745
Bst2UI CCWGG 6 cut(s) 141, 876, 909, 1143, 1233, 1243
Bst4CI ACNGT 1 cut(s) 514
Bst6I CTCTTC 2 cut(s) 345, 979
BstAPI GCANNNNNTGC 2 cut(s) 827, 1180
BstAUI TGTACA 2 cut(s) 239, 612
BstBAI YACGTR 1 cut(s) 715
BstC8I GCNNGC 2 cut(s) 126, 1185
BstDEI CTNAG 3 cut(s) 57, 505, 1206
BstDSI CCRYGG 4 cut(s) 331, 771, 1188, 1218
BstF5I GGATG 5 cut(s) 411, 433, 628, 1005, 1021
BstFNI CGCG 1 cut(s) 1220
BstKTI GATC 7 cut(s) 88, 166, 215, 521, 634, 640, 1129
BstMAI GTCTC 5 cut(s) 19, 688, 708, 742, 766
BstMBI GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
BstMWI GCNNNNNNNGC 6 cut(s) 61, 231, 827, 833, 1180, 1217
BstNI CCWGG 6 cut(s) 141, 876, 909, 1143, 1233, 1243
BstPAI GACNNNNGTC 1 cut(s) 700
BstSCI CCNGG 8 cut(s) 139, 874, 907, 946, 947, 1141, 1231, 1241
BstSFI CTRYAG 2 cut(s) 254, 963
BstSLI GKGCMC 1 cut(s) 296
BstSNI TACGTA 1 cut(s) 715
BstUI CGCG 1 cut(s) 1220
BstV1I GCAGC 4 cut(s) 209, 424, 709, 814
BstX2I RGATCY 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 934
BstYI RGATCY 1 cut(s) 637
Bsu36I CCTNAGG 1 cut(s) 57
BsuRI GGCC 5 cut(s) 55, 1146, 1187, 1193, 1223
BtgI CCRYGG 4 cut(s) 331, 771, 1188, 1218
BtsCI GGATG 5 cut(s) 411, 433, 628, 1005, 1021
BtsI GCAGTG 2 cut(s) 296, 972
BtsIMutI CAGTG 5 cut(s) 296, 492, 972, 1199, 1231
BveI ACCTGC 1 cut(s) 909
Cac8I GCNNGC 2 cut(s) 126, 1185
CciI TCATGA 1 cut(s) 166
Cfr13I GGNCC 2 cut(s) 1145, 1229
Cfr42I CCGCGG 1 cut(s) 1221
Cfr9I CCCGGG 1 cut(s) 947
CseI GACGC 1 cut(s) 1018
Csp6I GTAC 4 cut(s) 240, 588, 613, 1089
CviAII CATG 7 cut(s) 167, 226, 478, 570, 658, 772, 1189
CviQI GTAC 4 cut(s) 240, 588, 613, 1089
DdeI CTNAG 3 cut(s) 57, 505, 1206
DpnI GATC 7 cut(s) 87, 165, 214, 520, 633, 639, 1128
DpnII GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
EaeI YGGCCR 3 cut(s) 1185, 1191, 1221
Eam1104I CTCTTC 2 cut(s) 345, 979
EarI CTCTTC 2 cut(s) 345, 979
Eco105I TACGTA 1 cut(s) 715
Eco130I CCWWGG 2 cut(s) 771, 1188
Eco147I AGGCCT 1 cut(s) 55
Eco47I GGWCC 1 cut(s) 1229
Eco57I CTGAAG 3 cut(s) 119, 407, 762
Eco81I CCTNAGG 1 cut(s) 57
Eco88I CYCGRG 2 cut(s) 947, 1157
EcoO109I RGGNCCY 1 cut(s) 1145
EcoRI GAATTC 1 cut(s) 626
EcoRII CCWGG 6 cut(s) 139, 874, 907, 1141, 1231, 1241
EcoT14I CCWWGG 2 cut(s) 771, 1188
ErhI CCWWGG 2 cut(s) 771, 1188
FaeI CATG 7 cut(s) 170, 229, 481, 573, 661, 775, 1192
FatI CATG 7 cut(s) 166, 225, 477, 569, 657, 771, 1188
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 8 cut(s) 223, 410, 413, 723, 828, 880, 1218, 1221
FokI GGATG 5 cut(s) 418, 440, 635, 1012, 1028
Fsp4HI GCNGC 8 cut(s) 223, 410, 413, 723, 828, 880, 1218, 1221
FspBI CTAG 2 cut(s) 870, 1212
GluI GCNGC 8 cut(s) 223, 410, 413, 723, 828, 880, 1218, 1221
GsuI CTGGAG 3 cut(s) 162, 383, 516
HaeIII GGCC 5 cut(s) 55, 1146, 1187, 1193, 1223
HapII CCGG 2 cut(s) 786, 948
HgaI GACGC 1 cut(s) 1018
Hin1II CATG 7 cut(s) 170, 229, 481, 573, 661, 775, 1192
HincII GTYRAC 1 cut(s) 1036
HindII GTYRAC 1 cut(s) 1036
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 4 cut(s) 116, 384, 566, 860
HpaII CCGG 2 cut(s) 786, 948
HphI GGTGA 2 cut(s) 43, 789
Hpy166II GTNNAC 5 cut(s) 588, 613, 937, 1036, 1229
Hpy188I TCNGA 4 cut(s) 17, 733, 979, 1066
Hpy8I GTNNAC 5 cut(s) 588, 613, 937, 1036, 1229
Hpy99I CGWCG 1 cut(s) 1012
HpyAV CCTTC 4 cut(s) 15, 349, 533, 567
HpyCH4III ACNGT 1 cut(s) 514
HpyCH4IV ACGT 1 cut(s) 714
HpyCH4V TGCA 7 cut(s) 156, 225, 256, 445, 821, 965, 1058
HpyF10VI GCNNNNNNNGC 6 cut(s) 61, 231, 827, 833, 1180, 1217
HpyF3I CTNAG 3 cut(s) 57, 505, 1206
HpySE526I ACGT 1 cut(s) 714
Hsp92II CATG 7 cut(s) 170, 229, 481, 573, 661, 775, 1192
Ksp22I TGATCA 1 cut(s) 163
KspI CCGCGG 1 cut(s) 1221
Kzo9I GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
LmnI GCTCC 4 cut(s) 133, 364, 730, 1171
Lsp1109I GCAGC 4 cut(s) 209, 424, 709, 814
LweI GCATC 5 cut(s) 209, 243, 396, 709, 1170
MaeI CTAG 2 cut(s) 870, 1212
MaeII ACGT 1 cut(s) 714
MaeIII GTNAC 3 cut(s) 508, 742, 967
MalI GATC 7 cut(s) 87, 165, 214, 520, 633, 639, 1128
MboI GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
MflI RGATCY 1 cut(s) 637
MhlI GDGCHC 1 cut(s) 296
MlsI TGGCCA 1 cut(s) 1187
MluCI AATT 8 cut(s) 180, 271, 313, 369, 399, 626, 737, 952
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 2 cut(s) 125, 393
MmeI TCCRAC 3 cut(s) 951, 1063, 1089
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 1 cut(s) 552
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 1 cut(s) 207
MslI CAYNNNNRTG 1 cut(s) 78
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 1 cut(s) 1220
MspI CCGG 2 cut(s) 786, 948
MspR9I CCNGG 8 cut(s) 141, 876, 909, 948, 949, 1143, 1233, 1243
Mva1269I GAATGC 2 cut(s) 158, 447
MvaI CCWGG 6 cut(s) 141, 876, 909, 1143, 1233, 1243
MvnI CGCG 1 cut(s) 1220
MwoI GCNNNNNNNGC 6 cut(s) 61, 231, 827, 833, 1180, 1217
NciI CCSGG 2 cut(s) 948, 949
NcoI CCATGG 2 cut(s) 771, 1188
NdeII GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
NlaIII CATG 7 cut(s) 170, 229, 481, 573, 661, 775, 1192
NlaIV GGNNCC 2 cut(s) 483, 906
NmuCI GTSAC 2 cut(s) 742, 967
PagI TCATGA 1 cut(s) 166
PceI AGGCCT 1 cut(s) 55
PctI GAATGC 2 cut(s) 158, 447
PdmI GAANNNNTTC 1 cut(s) 552
PfeI GAWTC 2 cut(s) 566, 860
PfoI TCCNGGA 1 cut(s) 139
PkrI GCNGC 8 cut(s) 224, 411, 414, 724, 829, 881, 1219, 1222
PleI GAGTC 2 cut(s) 124, 392
PpsI GAGTC 2 cut(s) 124, 392
Ppu21I YACGTR 1 cut(s) 715
PshAI GACNNNNGTC 1 cut(s) 700
Psp6I CCWGG 6 cut(s) 139, 874, 907, 1141, 1231, 1241
PspGI CCWGG 6 cut(s) 139, 874, 907, 1141, 1231, 1241
PspN4I GGNNCC 2 cut(s) 483, 906
PspPI GGNCC 2 cut(s) 1145, 1229
PstI CTGCAG 2 cut(s) 258, 967
PsuI RGATCY 1 cut(s) 637
RsaI GTAC 4 cut(s) 241, 589, 614, 1090
RsaNI GTAC 4 cut(s) 240, 588, 613, 1089
RseI CAYNNNNRTG 1 cut(s) 78
SacII CCGCGG 1 cut(s) 1221
SaqAI TTAA 1 cut(s) 207
SatI GCNGC 8 cut(s) 223, 410, 413, 723, 828, 880, 1218, 1221
Sau3AI GATC 7 cut(s) 85, 163, 212, 518, 631, 637, 1126
Sau96I GGNCC 2 cut(s) 1145, 1229
SchI GAGTC 2 cut(s) 125, 393
ScrFI CCNGG 8 cut(s) 141, 876, 909, 948, 949, 1143, 1233, 1243
SduI GDGCHC 1 cut(s) 296
SfaNI GCATC 5 cut(s) 209, 243, 396, 709, 1170
SfcI CTRYAG 2 cut(s) 254, 963
Sfr303I CCGCGG 1 cut(s) 1221
SgrBI CCGCGG 1 cut(s) 1221
SinI GGWCC 1 cut(s) 1229
SmaI CCCGGG 1 cut(s) 949
SmiMI CAYNNNNRTG 1 cut(s) 78
SmlI CTYRAG 3 cut(s) 113, 561, 641
SmoI CTYRAG 3 cut(s) 113, 561, 641
SnaBI TACGTA 1 cut(s) 715
SpeI ACTAGT 1 cut(s) 869
Sse9I AATT 8 cut(s) 180, 271, 313, 369, 399, 626, 737, 952
SseBI AGGCCT 1 cut(s) 55
SsiI CCGC 6 cut(s) 409, 596, 836, 879, 1218, 1220
SspMI CTAG 2 cut(s) 870, 1212
StuI AGGCCT 1 cut(s) 55
StyD4I CCNGG 8 cut(s) 139, 874, 907, 946, 947, 1141, 1231, 1241
StyI CCWWGG 2 cut(s) 771, 1188
TaaI ACNGT 1 cut(s) 514
TaiI ACGT 1 cut(s) 717
TaqI TCGA 3 cut(s) 517, 630, 1007
TasI AATT 8 cut(s) 180, 271, 313, 369, 399, 626, 737, 952
TatI WGTACW 3 cut(s) 239, 612, 1088
TauI GCSGC 4 cut(s) 412, 882, 1220, 1223
TfiI GAWTC 2 cut(s) 566, 860
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TscAI CASTG 5 cut(s) 296, 492, 972, 1206, 1231
TseFI GTSAC 2 cut(s) 742, 967
TseI GCWGC 4 cut(s) 222, 412, 722, 827
Tsp45I GTSAC 2 cut(s) 742, 967
TspDTI ATGAA 9 cut(s) 162, 183, 242, 275, 444, 510, 558, 639, 780
TspGWI ACGGA 3 cut(s) 320, 717, 1060
TspMI CCCGGG 1 cut(s) 947
TspRI CASTG 5 cut(s) 296, 492, 972, 1206, 1231
VpaK11BI GGWCC 1 cut(s) 1229
XapI RAATTY 1 cut(s) 626
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmaI CCCGGG 1 cut(s) 947
XmnI GAANNNNTTC 1 cut(s) 552
XspI CTAG 2 cut(s) 870, 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.