MD05G1213800.v1.1

Heat stress transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0008306
Physical Location & Seq
Forward (+)
34515821 .. 34519882
4062 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1213800.v1.1.491

Sequence Viewer

Length: 1524 bp
ATGCAAACAACCATGGAGGGAGTCGAAGACGCCGCGTCGGTCATCAACTCCGCCAACGCTCCTCCGCCGTTTCTCAACAAAACCTACGATATGGTGGATGACCACTCCACCGACGCCGTCGTCTCCTGGAGCAACGGCAACAACAGCTTCGTCGTCTGGAACGTCCCCGAGTTCTCGAGGGACCTCCTGCCCAAGTATTTCAAGCACAACAACTTCTCTAGCTTCGTCAGGCAGTTGAATACTTATGGTTTTAGAAAGGTTGATCCAGACCGATGGGAATTTGCAAACGAAGGGTTTCTTAGAGGCCAGAAACACCTTTTGAAGACTGTAAGCAGGCGAAAACCAGCTCATGTACAGAGTCATCAACAACCACCACCTCAATTGCAGAGCTCTCAGGTTGGGGCATGTGTAGAGGTGGTAAATCCTGGGCTGGAGGAAGAGGTTGAAAGACTTAAAAGAGATAAGAACACTCTTATGCAGGAACTTGTTAGGCTTAGGCAGCAACAGCAAGCAACAGATAATCAGTTGCATAATGTTGGGCAACGTATGCAGGGAATGGAGCAGCGGCAGCAGCAAATGATGTCATTTCTTGCAAAGGCTATGCATAGTCCCGGATTTTTATCACAGCTTGTCCAGCATCAGAATGAAAACAATAGGCGCATCACTGGAAGCAATAAGAAAAGGAGACTCCCAAGGCAAGATGATGAAATTTTGGTTGGGAACCTTGGCAGCAAAGTTCTTGATGGACAAATGGTGAAGTACCAGCCTTCAATGAATGAAGCAGCAAAAGCAATGCTGCTGCAGATCTTGAAGATGAATACATCTCCAAAGCTGGAACCATCATTGATCAATCCTGATGCTTTCCTAATTGATAATGTTCCTTCCAATGCAACAGATAGTAGGAACACCTCTAGTCGGAACTTAGGGGTGACCCTTTCAGAGGTTCCACCAATTTCTGCAGAGTGTTATATGCCTGAAGAGTCTAGATTTCCTGTCAGTTGTCATTCTACAGCCATTTCTGAGATCCAGTCTTCCCCTTATGCGGTTTCCAACTCTGTTAAAGAAACTCAAGTTTTGGAAGAGAACATGCATAATTTTCAACAAGATACAGTTATCCCTGAACTAACTCGAATGCAAGGTATTGTTTCAGAAAGCAATGTGGAAATCCCCAATGCAAACTTCATTGGCTCTGAGATTGGGAATGCAGGATACATGGGCATGTCAGCAGGTTTGGATGGGAGACTGCCTACAGATATTTTACCATTTTCTCCTGAGCCTGATGCAGATGCCTTGCCAGATGGGGTCTCTAGCCTTCCAGGCATTAACGATATCTTCTGGGAACAATTTCTCACAGCAAGCCCACCGCCTGGTGACACTGATGAAATTAGTTTTAGTTCCGATGATGGAGTGGCTGTGAATCAGGATTTGCAGTTGGGGAAGGAGAATGGATGGGAAAAGAGTCAACATATGAATCACATCACTGAACAAATGCAGCTCCTTGCATCGGGGAGCAGAACTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HSF_DNA-bind

Protein Analysis

508

Amino Acids

56.51

Weight (kDa)

5.16

Isoelectric Point (pI)

63.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSF_DNA-bind PF00447 24 - 113 4.5e-29 HSF-type DNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 1217
AccB7I CCANNNNNTGG 1 cut(s) 1367
AccII CGCG 1 cut(s) 35
AciI CCGC 6 cut(s) 33, 51, 65, 565, 1043, 1364
AclWI GGATC 2 cut(s) 257, 1018
AcsI RAATTY 2 cut(s) 278, 708
AcuI CTGAAG 1 cut(s) 996
AcyI GRCGYC 2 cut(s) 30, 114
AfaI GTAC 2 cut(s) 354, 761
AfiI CCNNNNNNNGG 5 cut(s) 915, 940, 1042, 1367, 1504
AgsI TTSAA 7 cut(s) 202, 238, 322, 446, 771, 811, 1100
AhdI GACNNNNNGTC 1 cut(s) 34
AjnI CCWGG 4 cut(s) 125, 424, 1315, 1366
AjuI GAANNNNNNNTTGG 4 cut(s) 699, 731, 1163, 1195
AluBI AGCT 7 cut(s) 147, 222, 347, 390, 628, 832, 1495
AluI AGCT 7 cut(s) 147, 222, 347, 390, 628, 832, 1495
Alw21I GWGCWC 1 cut(s) 392
Alw26I GTCTC 4 cut(s) 127, 679, 1234, 1309
AlwI GGATC 2 cut(s) 257, 1018
Ama87I CYCGRG 2 cut(s) 167, 175
AoxI GGCC 1 cut(s) 304
ApeKI GCWGC 9 cut(s) 499, 562, 568, 571, 729, 782, 796, 799, 1492
ApoI RAATTY 2 cut(s) 278, 708
Asp700I GAANNNNTTC 2 cut(s) 294, 1344
AspLEI GCGC 1 cut(s) 660
AspS9I GGNCC 1 cut(s) 181
AsuC2I CCSGG 1 cut(s) 612
AsuHPI GGTGA 3 cut(s) 766, 940, 1382
AvaI CYCGRG 2 cut(s) 167, 175
AvaII GGWCC 1 cut(s) 181
BanII GRGCYC 1 cut(s) 392
BbsI GAAGAC 3 cut(s) 33, 329, 1023
Bbv12I GWGCWC 1 cut(s) 392
BbvI GCAGC 9 cut(s) 511, 574, 580, 583, 741, 783, 786, 794, 1504
BccI CCATC 7 cut(s) 267, 737, 847, 1229, 1292, 1397, 1443
BceAI ACGGC 3 cut(s) 52, 101, 151
BciT130I CCWGG 4 cut(s) 127, 426, 1317, 1368
BciVI GTATCC 1 cut(s) 1202
BclI TGATCA 1 cut(s) 846
BcnI CCSGG 1 cut(s) 612
BcoDI GTCTC 4 cut(s) 127, 679, 1234, 1309
BfaI CTAG 4 cut(s) 219, 912, 984, 1308
BfmI CTRYAG 4 cut(s) 800, 957, 1008, 1248
BfuAI ACCTGC 1 cut(s) 1217
BfuI GTATCC 1 cut(s) 1202
BglI GCCNNNNNGGC 1 cut(s) 1317
BglII AGATCT 1 cut(s) 804
Bme1390I CCNGG 5 cut(s) 127, 426, 612, 1317, 1368
Bme18I GGWCC 1 cut(s) 181
BmeRI GACNNNNNGTC 1 cut(s) 34
BmeT110I CYCGRG 2 cut(s) 167, 175
BmgT120I GGNCC 1 cut(s) 181
BmiI GGNNCC 4 cut(s) 182, 722, 837, 945
BmrFI CCNGG 5 cut(s) 127, 426, 612, 1317, 1368
BmsI GCATC 6 cut(s) 646, 669, 847, 1270, 1276, 1511
BpiI GAAGAC 3 cut(s) 33, 329, 1023
BpmI CTGGAG 2 cut(s) 148, 452
Bpu10I CCTNAGC 2 cut(s) 494, 1272
BpuEI CTTGAG 1 cut(s) 1053
BpuMI CCSGG 1 cut(s) 612
BsaBI GATNNNNATC 1 cut(s) 619
BsaHI GRCGYC 2 cut(s) 30, 114
BsaI GGTCTC 1 cut(s) 1309
BsaJI CCNNGG 4 cut(s) 12, 425, 692, 724
BsaXI ACNNNNNCTCC 2 cut(s) 1398, 1428
Bsc4I CCNNNNNNNGG 5 cut(s) 915, 940, 1042, 1367, 1504
Bse1I ACTGG 3 cut(s) 670, 1027, 1522
Bse3DI GCAATG 2 cut(s) 798, 1162
Bse8I GATNNNNATC 1 cut(s) 619
BseBI CCWGG 4 cut(s) 127, 426, 1317, 1368
BseDI CCNNGG 4 cut(s) 12, 425, 692, 724
BseGI GGATG 3 cut(s) 103, 1240, 1454
BseJI GATNNNNATC 1 cut(s) 619
BseLI CCNNNNNNNGG 5 cut(s) 915, 940, 1042, 1367, 1504
BseMI GCAATG 2 cut(s) 798, 1162
BseMII CTCAG 4 cut(s) 407, 1011, 1182, 1263
BseNI ACTGG 3 cut(s) 670, 1027, 1522
BseRI GAGGAG 1 cut(s) 51
BseXI GCAGC 9 cut(s) 511, 574, 580, 583, 741, 783, 786, 794, 1504
Bsh1236I CGCG 1 cut(s) 35
BshFI GGCC 1 cut(s) 306
BsiHKAI GWGCWC 1 cut(s) 392
BsiHKCI CYCGRG 2 cut(s) 167, 175
BsiSI CCGG 1 cut(s) 612
BslFI GGGAC 3 cut(s) 149, 194, 594
BslI CCNNNNNNNGG 5 cut(s) 915, 940, 1042, 1367, 1504
BsmAI GTCTC 4 cut(s) 127, 679, 1234, 1309
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 3 cut(s) 149, 194, 594
BsmI GAATGC 2 cut(s) 1137, 1207
BsnI GGCC 1 cut(s) 306
Bso31I GGTCTC 1 cut(s) 1309
BsoBI CYCGRG 2 cut(s) 167, 175
Bsp1286I GDGCHC 1 cut(s) 392
Bsp1407I TGTACA 1 cut(s) 352
Bsp143I GATC 4 cut(s) 262, 804, 846, 1023
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 6 cut(s) 33, 51, 65, 565, 1043, 1364
BspANI GGCC 1 cut(s) 306
BspCNI CTCAG 4 cut(s) 406, 1012, 1183, 1264
BspFNI CGCG 1 cut(s) 35
BspLI GGNNCC 4 cut(s) 182, 722, 837, 945
BspMAI CTGCAG 2 cut(s) 804, 961
BspMI ACCTGC 1 cut(s) 1217
BspPI GGATC 2 cut(s) 257, 1018
BspTNI GGTCTC 1 cut(s) 1309
BsrDI GCAATG 2 cut(s) 798, 1162
BsrGI TGTACA 1 cut(s) 352
BsrI ACTGG 3 cut(s) 670, 1027, 1522
BssECI CCNNGG 4 cut(s) 12, 425, 692, 724
BssMI GATC 4 cut(s) 262, 804, 846, 1023
BssNI GRCGYC 2 cut(s) 30, 114
BssT1I CCWWGG 3 cut(s) 12, 692, 724
Bst2UI CCWGG 4 cut(s) 127, 426, 1317, 1368
Bst4CI ACNGT 2 cut(s) 328, 1111
Bst6I CTCTTC 3 cut(s) 432, 972, 1074
BstACI GRCGYC 2 cut(s) 30, 114
BstAPI GCANNNNNTGC 1 cut(s) 547
BstAUI TGTACA 1 cut(s) 352
BstC8I GCNNGC 3 cut(s) 335, 510, 1357
BstDEI CTNAG 7 cut(s) 299, 393, 494, 922, 1020, 1191, 1272
BstDSI CCRYGG 1 cut(s) 12
BstEII GGTNACC 1 cut(s) 928
BstENI CCTNNNNNAGG 1 cut(s) 938
BstF5I GGATG 3 cut(s) 103, 1240, 1454
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 1 cut(s) 660
BstKTI GATC 4 cut(s) 265, 807, 849, 1026
BstMAI GTCTC 4 cut(s) 127, 679, 1234, 1309
BstMBI GATC 4 cut(s) 262, 804, 846, 1023
BstMWI GCNNNNNNNGC 9 cut(s) 144, 499, 505, 547, 568, 571, 634, 788, 1317
BstNI CCWGG 4 cut(s) 127, 426, 1317, 1368
BstNSI RCATGY 3 cut(s) 408, 1090, 1222
BstPI GGTNACC 1 cut(s) 928
BstSCI CCNGG 5 cut(s) 125, 424, 610, 1315, 1366
BstSFI CTRYAG 4 cut(s) 800, 957, 1008, 1248
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 9 cut(s) 511, 574, 580, 583, 741, 783, 786, 794, 1504
BstV2I GAAGAC 3 cut(s) 33, 329, 1023
BstX2I RGATCY 2 cut(s) 804, 1023
BstXI CCANNNNNNTGG 1 cut(s) 273
BstYI RGATCY 2 cut(s) 804, 1023
BsuI GTATCC 1 cut(s) 1202
BsuRI GGCC 1 cut(s) 306
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 3 cut(s) 103, 1240, 1454
BtsIMutI CAGTG 3 cut(s) 663, 1374, 1479
BveI ACCTGC 1 cut(s) 1217
Cac8I GCNNGC 3 cut(s) 335, 510, 1357
CfoI GCGC 1 cut(s) 660
Cfr13I GGNCC 1 cut(s) 181
CseI GACGC 3 cut(s) 24, 38, 122
Csp6I GTAC 2 cut(s) 353, 760
CspCI CAANNNNNGTGG 2 cut(s) 363, 398
CviAII CATG 6 cut(s) 13, 350, 405, 1087, 1213, 1219
CviQI GTAC 2 cut(s) 353, 760
DdeI CTNAG 7 cut(s) 299, 393, 494, 922, 1020, 1191, 1272
DpnI GATC 4 cut(s) 264, 806, 848, 1025
DpnII GATC 4 cut(s) 262, 804, 846, 1023
DrdI GACNNNNNNGTC 1 cut(s) 119
DriI GACNNNNNGTC 1 cut(s) 34
DseDI GACNNNNNNGTC 1 cut(s) 119
Eam1104I CTCTTC 3 cut(s) 432, 972, 1074
Eam1105I GACNNNNNGTC 1 cut(s) 34
EarI CTCTTC 3 cut(s) 432, 972, 1074
EciI GGCGGA 2 cut(s) 40, 54
Ecl136II GAGCTC 1 cut(s) 390
Eco130I CCWWGG 3 cut(s) 12, 692, 724
Eco24I GRGCYC 1 cut(s) 392
Eco31I GGTCTC 1 cut(s) 1309
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 1 cut(s) 181
Eco53kI GAGCTC 1 cut(s) 390
Eco57I CTGAAG 1 cut(s) 996
Eco88I CYCGRG 2 cut(s) 167, 175
Eco91I GGTNACC 1 cut(s) 928
EcoICRI GAGCTC 1 cut(s) 390
EcoNI CCTNNNNNAGG 1 cut(s) 938
EcoO109I RGGNCCY 1 cut(s) 181
EcoO65I GGTNACC 1 cut(s) 928
EcoRII CCWGG 4 cut(s) 125, 424, 1315, 1366
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 3 cut(s) 12, 692, 724
EcoT22I ATGCAT 2 cut(s) 606, 1092
EcoT38I GRGCYC 1 cut(s) 392
ErhI CCWWGG 3 cut(s) 12, 692, 724
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 6 cut(s) 16, 353, 408, 1090, 1216, 1222
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 3 cut(s) 149, 194, 594
FatI CATG 6 cut(s) 12, 349, 404, 1086, 1212, 1218
FauNDI CATATG 1 cut(s) 1467
FbaI TGATCA 1 cut(s) 846
FokI GGATG 3 cut(s) 110, 1247, 1461
FriOI GRGCYC 1 cut(s) 392
FspBI CTAG 4 cut(s) 219, 912, 984, 1308
GlaI GCGC 1 cut(s) 659
GsuI CTGGAG 2 cut(s) 148, 452
HaeIII GGCC 1 cut(s) 306
HapII CCGG 1 cut(s) 612
HgaI GACGC 3 cut(s) 24, 38, 122
HhaI GCGC 1 cut(s) 660
Hin1I GRCGYC 2 cut(s) 30, 114
Hin1II CATG 6 cut(s) 16, 353, 408, 1090, 1216, 1222
Hin6I GCGC 1 cut(s) 658
HinP1I GCGC 1 cut(s) 658
HincII GTYRAC 1 cut(s) 1463
HindII GTYRAC 1 cut(s) 1463
HinfI GANTC 7 cut(s) 21, 358, 687, 980, 1417, 1459, 1471
HpaII CCGG 1 cut(s) 612
HphI GGTGA 3 cut(s) 766, 940, 1382
Hpy166II GTNNAC 1 cut(s) 1463
Hpy188I TCNGA 7 cut(s) 642, 918, 940, 1021, 1150, 1192, 1399
Hpy188III TCNNGA 9 cut(s) 157, 175, 266, 740, 808, 854, 984, 1271, 1421
Hpy8I GTNNAC 1 cut(s) 1463
Hpy99I CGWCG 4 cut(s) 40, 116, 122, 155
HpyAV CCTTC 5 cut(s) 284, 777, 891, 1322, 1432
HpyCH4III ACNGT 2 cut(s) 328, 1111
HpyCH4IV ACGT 2 cut(s) 162, 544
HpyF10VI GCNNNNNNNGC 9 cut(s) 144, 499, 505, 547, 568, 571, 634, 788, 1317
HpyF3I CTNAG 7 cut(s) 299, 393, 494, 922, 1020, 1191, 1272
HpySE526I ACGT 2 cut(s) 162, 544
Hsp92I GRCGYC 2 cut(s) 30, 114
Hsp92II CATG 6 cut(s) 16, 353, 408, 1090, 1216, 1222
HspAI GCGC 1 cut(s) 658
Ksp22I TGATCA 1 cut(s) 846
Kzo9I GATC 4 cut(s) 262, 804, 846, 1023
LmnI GCTCC 5 cut(s) 64, 129, 559, 1500, 1509
Lsp1109I GCAGC 9 cut(s) 511, 574, 580, 583, 741, 783, 786, 794, 1504
LweI GCATC 6 cut(s) 646, 669, 847, 1270, 1276, 1511
MaeI CTAG 4 cut(s) 219, 912, 984, 1308
MaeII ACGT 2 cut(s) 162, 544
MaeIII GTNAC 2 cut(s) 928, 1370
MalI GATC 4 cut(s) 264, 806, 848, 1025
MboI GATC 4 cut(s) 262, 804, 846, 1023
MboII GAAGA 8 cut(s) 38, 334, 449, 823, 989, 1023, 1091, 1324
MfeI CAATTG 1 cut(s) 380
MflI RGATCY 2 cut(s) 804, 1023
MhlI GDGCHC 1 cut(s) 392
MluCI AATT 8 cut(s) 278, 380, 708, 867, 951, 1093, 1343, 1383
MlyI GAGTC 5 cut(s) 30, 367, 681, 989, 1468
MmeI TCCRAC 2 cut(s) 896, 1074
Mph1103I ATGCAT 2 cut(s) 606, 1092
MroXI GAANNNNTTC 2 cut(s) 294, 1344
MseI TTAA 3 cut(s) 453, 1059, 1323
MslI CAYNNNNRTG 3 cut(s) 473, 642, 1217
MspA1I CMGCKG 1 cut(s) 565
MspI CCGG 1 cut(s) 612
MspR9I CCNGG 5 cut(s) 127, 426, 612, 1317, 1368
MunI CAATTG 1 cut(s) 380
Mva1269I GAATGC 2 cut(s) 1137, 1207
MvaI CCWGG 4 cut(s) 127, 426, 1317, 1368
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 9 cut(s) 144, 499, 505, 547, 568, 571, 634, 788, 1317
NciI CCSGG 1 cut(s) 612
NcoI CCATGG 1 cut(s) 12
NdeI CATATG 1 cut(s) 1467
NdeII GATC 4 cut(s) 262, 804, 846, 1023
NlaIII CATG 6 cut(s) 16, 353, 408, 1090, 1216, 1222
NlaIV GGNNCC 4 cut(s) 182, 722, 837, 945
NmuCI GTSAC 2 cut(s) 928, 1370
NsiI ATGCAT 2 cut(s) 606, 1092
NspI RCATGY 3 cut(s) 408, 1090, 1222
PaeR7I CTCGAG 1 cut(s) 175
PcsI WCGNNNNNNNCGW 1 cut(s) 159
PctI GAATGC 2 cut(s) 1137, 1207
PdmI GAANNNNTTC 2 cut(s) 294, 1344
PfeI GAWTC 2 cut(s) 1417, 1471
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 1 cut(s) 1367
PfoI TCCNGGA 2 cut(s) 125, 610
PleI GAGTC 5 cut(s) 29, 366, 681, 988, 1467
PpsI GAGTC 5 cut(s) 29, 366, 681, 988, 1467
PpuMI RGGWCCY 1 cut(s) 181
Psp124BI GAGCTC 1 cut(s) 392
Psp5II RGGWCCY 1 cut(s) 181
Psp6I CCWGG 4 cut(s) 125, 424, 1315, 1366
PspEI GGTNACC 1 cut(s) 928
PspGI CCWGG 4 cut(s) 125, 424, 1315, 1366
PspN4I GGNNCC 4 cut(s) 182, 722, 837, 945
PspPI GGNCC 1 cut(s) 181
PspPPI RGGWCCY 1 cut(s) 181
PstI CTGCAG 2 cut(s) 804, 961
PsuI RGATCY 2 cut(s) 804, 1023
PsyI GACNNNGTC 1 cut(s) 116
RsaI GTAC 2 cut(s) 354, 761
RsaNI GTAC 2 cut(s) 353, 760
RseI CAYNNNNRTG 3 cut(s) 473, 642, 1217
SacI GAGCTC 1 cut(s) 392
SaqAI TTAA 3 cut(s) 453, 1059, 1323
Sau3AI GATC 4 cut(s) 262, 804, 846, 1023
Sau96I GGNCC 1 cut(s) 181
SchI GAGTC 5 cut(s) 30, 367, 681, 989, 1468
ScrFI CCNGG 5 cut(s) 127, 426, 612, 1317, 1368
SduI GDGCHC 1 cut(s) 392
SfaNI GCATC 6 cut(s) 646, 669, 847, 1270, 1276, 1511
SfcI CTRYAG 4 cut(s) 800, 957, 1008, 1248
Sfr274I CTCGAG 1 cut(s) 175
SinI GGWCC 1 cut(s) 181
SlaI CTCGAG 1 cut(s) 175
SmiMI CAYNNNNRTG 3 cut(s) 473, 642, 1217
SmlI CTYRAG 2 cut(s) 175, 1068
SmoI CTYRAG 2 cut(s) 175, 1068
Sse9I AATT 8 cut(s) 278, 380, 708, 867, 951, 1093, 1343, 1383
SsiI CCGC 6 cut(s) 33, 51, 65, 565, 1043, 1364
SspMI CTAG 4 cut(s) 219, 912, 984, 1308
SstI GAGCTC 1 cut(s) 392
StyD4I CCNGG 5 cut(s) 125, 424, 610, 1315, 1366
StyI CCWWGG 3 cut(s) 12, 692, 724
TaaI ACNGT 2 cut(s) 328, 1111
TaiI ACGT 2 cut(s) 165, 547
TaqI TCGA 3 cut(s) 24, 176, 1129
TaqII GACCGA 2 cut(s) 28, 285
TasI AATT 8 cut(s) 278, 380, 708, 867, 951, 1093, 1343, 1383
TatI WGTACW 1 cut(s) 352
TauI GCSGC 2 cut(s) 35, 568
TfiI GAWTC 2 cut(s) 1417, 1471
Tru1I TTAA 3 cut(s) 453, 1059, 1323
Tru9I TTAA 3 cut(s) 453, 1059, 1323
TscAI CASTG 3 cut(s) 670, 1381, 1486
TseFI GTSAC 2 cut(s) 928, 1370
TseI GCWGC 9 cut(s) 499, 562, 568, 571, 729, 782, 796, 799, 1492
Tsp45I GTSAC 2 cut(s) 928, 1370
TspDTI ATGAA 8 cut(s) 660, 720, 788, 792, 830, 1171, 1395, 1484
TspRI CASTG 3 cut(s) 670, 1381, 1486
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 1 cut(s) 1367
VpaK11BI GGWCC 1 cut(s) 181
XagI CCTNNNNNAGG 1 cut(s) 938
XapI RAATTY 2 cut(s) 278, 708
XbaI TCTAGA 1 cut(s) 983
XceI RCATGY 3 cut(s) 408, 1090, 1222
XhoI CTCGAG 1 cut(s) 175
XmnI GAANNNNTTC 2 cut(s) 294, 1344
XspI CTAG 4 cut(s) 219, 912, 984, 1308
Zsp2I ATGCAT 2 cut(s) 606, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.