MD05G1234200.v1.1

Belongs to the phosphoglycerate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0008242
Physical Location & Seq
Forward (+)
36649948 .. 36653507
3560 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1234200.v1.1.491

Sequence Viewer

Length: 1359 bp
ATGGCAATAACTAGGTGCGCTCCTAACAAAAAAAACTCGCACGTGTCGTACATCCCACGCACCAAATCCTTTCTTTCCTCTATTAAAAAAAAAAAGCCCTCTCTTACTGTCAGTCTCCCTGTCTTGTTCATCTATCTCTCACTCTCAAAAGGTCTCAGCTTTGTTTCTAGCGTGAGTACTTTGAAGGAGGCTGAGTTGAAGGGGAAGAGAGTGTTTGTGAGGGTTGATCTCAATGTTCCTTTGGATGACAACTCCAACATCACTGACGATACTAGGGTCCGCGCCGCCGTGCCCACCATCAAGTACTTGATCGGCCATGGCGCCAAAGTTATCCTTGCTTCTCACTTGGGACGTCCCAAGGGAGTAACTCCCAAATACAGTTTGAAGCCTCTTGTGCCCAGGCTTTCTGAGCTCCTTGGACTCGAGGTTAAGATTGCCAATGACTGTATTGGTGAGGAAGTCGAGAAATTAGTTGCTCAACTTCCAGAGGGAGGAGTTTTGCTCCTTGAGAATGTTAGGTTCTACAAGGAGGAAGAGAAGAATGACCCTGAATTCGCCAAGAAGCTTGCTTCACTTGCAGATGTTTATGTGAATGATGCTTTTGGTACTGCTCATAGGGCTCATGCATCAACAGAGGGAGTGGCTAAGTACTTGAAGCCTTCCGTTGCTGGATTCCTTATGCAGAAGGAACTTGACTACCTTGTCGGCGCCGTAGCAAATCCTAAGAGGCCATTTGCTGCCATTGTTGGCGGTGCAAAGGTGTCATCCAAGATTGGAGTGATAGAATCCTTGTTGGAGAAGGTTAACATTCTCTTACTCGGTGGAGGAATGATCTTTACCTTCTACAAGGCCCAAGGGCATTCAGTTGGATCTTCCCTTGTGGAGGAAGACAAGCTTGATCTTGCAAAGTCACTTCTTGAGAAGGCCAAATCTAAGGGGGTTTCTTTTCTCCTCCCAACTGATGTGGTTATTGCTGACAAGTTTGCTGCTGATGCAAACAGCAAGGTTGTGCCAGCTTCTGCTATTCCAGATGGTTGGATGGGATTGGATATTGGACCAGACTCGATCAAAACTTTCAGTGAAGCTCTGGATACCACTCAAACTGTTATCTGGAACGGACCTATGGGTGTTTTCGAGTTTGAGAAGTTTTCTACTGGGACTGTGGCAATAGCTAAGAAGCTTGCAGAGCTGAGCGGCAAGGGGGTGACAACAATCATCGGAGGTGGTGACTCAGTTGCCGCTGTTGAGAAGGCTGGGCTTGCTGAGAAGATGAGCCACATCTCAACTGGAGGCGGTGCAAGCTTAGAGCTCCTCGAAGGCAAAACACTCCCCGGAGTCCTTGCTCTTGACGATGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002237 GO:0003674 GO:0003824 GO:0004618 GO:0004672 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006464 GO:0006468 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009743 GO:0009746 GO:0009749 GO:0009987 GO:0010033 GO:0016020 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016774 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019538 GO:0019637 GO:0019693 GO:0019752 GO:0030054 GO:0031090 GO:0032787 GO:0034284 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0036211 GO:0042221 GO:0042866 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046939 GO:0048046 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0055044 GO:0055086 GO:0071704 GO:0071944 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:0098588 GO:0098805 GO:0140096 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00010 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00010 map00710 map01100 map01110 map01120 map01130 map01200 map01230
Pfam Domains
Protein Families
PGK

Protein Analysis

453

Amino Acids

48.03

Weight (kDa)

8.92

Isoelectric Point (pI)

26.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGK PF00162 61 - 441 1.4e-170 Phosphoglycerate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 701
AatII GACGTC 1 cut(s) 355
AccB1I GGYRCC 2 cut(s) 320, 707
AccBSI CCGCTC 1 cut(s) 1194
AccII CGCG 1 cut(s) 282
AciI CCGC 6 cut(s) 280, 285, 750, 1194, 1239, 1293
AclWI GGATC 1 cut(s) 877
AcoI YGGCCR 1 cut(s) 313
AcsI RAATTY 1 cut(s) 551
AcvI CACGTG 1 cut(s) 43
AcyI GRCGYC 3 cut(s) 321, 352, 708
AfaI GTAC 5 cut(s) 50, 178, 305, 607, 650
AfiI CCNNNNNNNGG 2 cut(s) 491, 883
AflIII ACRYGT 1 cut(s) 42
AgsI TTSAA 4 cut(s) 184, 199, 385, 655
AjnI CCWGG 1 cut(s) 398
Alw21I GWGCWC 2 cut(s) 414, 1311
Alw26I GTCTC 2 cut(s) 119, 158
AlwI GGATC 1 cut(s) 877
AlwNI CAGNNNCTG 1 cut(s) 1019
Ama87I CYCGRG 1 cut(s) 422
AoxI GGCC 4 cut(s) 313, 728, 849, 924
ApeKI GCWGC 2 cut(s) 737, 986
ApoI RAATTY 1 cut(s) 551
ArsI GACNNNNNNTTYG 2 cut(s) 536, 568
AspLEI GCGC 4 cut(s) 20, 284, 323, 710
AspS9I GGNCC 4 cut(s) 277, 850, 1055, 1118
AsuC2I CCSGG 1 cut(s) 1332
AsuHPI GGTGA 3 cut(s) 464, 1216, 1238
AvaI CYCGRG 1 cut(s) 422
AvaII GGWCC 3 cut(s) 277, 1055, 1118
BaeGI GKGCMC 2 cut(s) 294, 399
BaeI ACNNNNGTAYC 2 cut(s) 261, 294
BanI GGYRCC 2 cut(s) 320, 707
BanII GRGCYC 3 cut(s) 414, 622, 1311
BbrPI CACGTG 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 894
Bbv12I GWGCWC 2 cut(s) 414, 1311
BbvI GCAGC 2 cut(s) 724, 973
BccI CCATC 3 cut(s) 305, 1025, 1033
BceAI ACGGC 2 cut(s) 272, 695
BciT130I CCWGG 1 cut(s) 400
BciVI GTATCC 1 cut(s) 1084
BcnI CCSGG 1 cut(s) 1332
BcoDI GTCTC 2 cut(s) 119, 158
BfaI CTAG 3 cut(s) 12, 168, 273
BfoI RGCGCY 2 cut(s) 324, 711
BfuI GTATCC 1 cut(s) 1084
BisI GCNGC 5 cut(s) 285, 738, 987, 1195, 1239
BlpI GCTNAGC 1 cut(s) 1190
BlsI GCNGC 5 cut(s) 286, 739, 988, 1196, 1240
BmcAI AGTACT 3 cut(s) 178, 305, 650
Bme1390I CCNGG 2 cut(s) 400, 1332
Bme18I GGWCC 3 cut(s) 277, 1055, 1118
BmeT110I CYCGRG 1 cut(s) 422
BmgT120I GGNCC 4 cut(s) 277, 850, 1055, 1118
BmiI GGNNCC 3 cut(s) 278, 322, 709
BmrFI CCNGG 2 cut(s) 400, 1332
BmrI ACTGGG 1 cut(s) 1164
BmsI GCATC 4 cut(s) 586, 635, 982, 1342
BmuI ACTGGG 1 cut(s) 1164
BpiI GAAGAC 1 cut(s) 894
BplI GAGNNNNNCTC 2 cut(s) 486, 518
BpmI CTGGAG 1 cut(s) 1308
Bpu1102I GCTNAGC 1 cut(s) 1190
BpuEI CTTGAG 2 cut(s) 527, 938
BpuMI CCSGG 1 cut(s) 1332
BsaAI YACGTR 1 cut(s) 43
BsaHI GRCGYC 3 cut(s) 321, 352, 708
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 6 cut(s) 316, 357, 398, 415, 853, 1330
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 2 cut(s) 491, 883
Bse1I ACTGG 2 cut(s) 1159, 1291
BseBI CCWGG 1 cut(s) 400
BseDI CCNNGG 6 cut(s) 316, 357, 398, 415, 853, 1330
BseGI GGATG 4 cut(s) 51, 250, 764, 1044
BseLI CCNNNNNNNGG 2 cut(s) 491, 883
BseMII CTCAG 6 cut(s) 169, 183, 399, 1181, 1245, 1254
BseNI ACTGG 2 cut(s) 1159, 1291
BseRI GAGGAG 3 cut(s) 507, 941, 1301
BseSI GKGCMC 2 cut(s) 294, 399
BseXI GCAGC 2 cut(s) 724, 973
BseYI CCCAGC 1 cut(s) 1253
Bsh1236I CGCG 1 cut(s) 282
BshFI GGCC 4 cut(s) 315, 730, 851, 926
BshNI GGYRCC 2 cut(s) 320, 707
BsiHKAI GWGCWC 2 cut(s) 414, 1311
BsiHKCI CYCGRG 1 cut(s) 422
BsiSI CCGG 1 cut(s) 1332
BslFI GGGAC 3 cut(s) 339, 363, 1171
BslI CCNNNNNNNGG 2 cut(s) 491, 883
BsmAI GTCTC 2 cut(s) 119, 158
BsmFI GGGAC 3 cut(s) 339, 363, 1171
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 4 cut(s) 315, 730, 851, 926
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 422
Bsp1286I GDGCHC 5 cut(s) 294, 399, 414, 622, 1311
Bsp143I GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
Bsp1720I GCTNAGC 1 cut(s) 1190
Bsp19I CCATGG 1 cut(s) 316
BspACI CCGC 6 cut(s) 280, 285, 750, 1194, 1239, 1293
BspANI GGCC 4 cut(s) 315, 730, 851, 926
BspCNI CTCAG 6 cut(s) 168, 184, 400, 1182, 1244, 1255
BspFNI CGCG 1 cut(s) 282
BspLI GGNNCC 3 cut(s) 278, 322, 709
BspPI GGATC 1 cut(s) 877
BspT107I GGYRCC 2 cut(s) 320, 707
BspTNI GGTCTC 1 cut(s) 158
BsrBI CCGCTC 1 cut(s) 1194
BsrI ACTGG 2 cut(s) 1159, 1291
BssECI CCNNGG 6 cut(s) 316, 357, 398, 415, 853, 1330
BssMI GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
BssNI GRCGYC 3 cut(s) 321, 352, 708
BssT1I CCWWGG 4 cut(s) 316, 357, 415, 853
Bst2UI CCWGG 1 cut(s) 400
Bst4CI ACNGT 5 cut(s) 109, 380, 446, 1105, 1162
Bst6I CTCTTC 2 cut(s) 200, 528
BstACI GRCGYC 3 cut(s) 321, 352, 708
BstBAI YACGTR 1 cut(s) 43
BstC8I GCNNGC 5 cut(s) 567, 1014, 1182, 1260, 1300
BstDSI CCRYGG 1 cut(s) 316
BstENI CCTNNNNNAGG 1 cut(s) 881
BstF5I GGATG 4 cut(s) 51, 250, 764, 1044
BstFNI CGCG 1 cut(s) 282
BstH2I RGCGCY 2 cut(s) 324, 711
BstHHI GCGC 4 cut(s) 20, 284, 323, 710
BstKTI GATC 6 cut(s) 229, 312, 834, 872, 901, 1068
BstMAI GTCTC 2 cut(s) 119, 158
BstMBI GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
BstMWI GCNNNNNNNGC 8 cut(s) 394, 409, 575, 617, 992, 1186, 1259, 1299
BstNI CCWGG 1 cut(s) 400
BstSCI CCNGG 2 cut(s) 398, 1330
BstSLI GKGCMC 2 cut(s) 294, 399
BstUI CGCG 1 cut(s) 282
BstV1I GCAGC 2 cut(s) 724, 973
BstV2I GAAGAC 1 cut(s) 894
BstX2I RGATCY 1 cut(s) 869
BstXI CCANNNNNNTGG 1 cut(s) 1035
BstYI RGATCY 1 cut(s) 869
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 4 cut(s) 315, 730, 851, 926
BtgI CCRYGG 1 cut(s) 316
BtsCI GGATG 4 cut(s) 51, 250, 764, 1044
BtsIMutI CAGTG 2 cut(s) 261, 1084
Cac8I GCNNGC 5 cut(s) 567, 1014, 1182, 1260, 1300
CaiI CAGNNNCTG 1 cut(s) 1019
CfoI GCGC 4 cut(s) 20, 284, 323, 710
Cfr13I GGNCC 4 cut(s) 277, 850, 1055, 1118
Csp6I GTAC 5 cut(s) 49, 177, 304, 606, 649
CspCI CAANNNNNGTGG 2 cut(s) 945, 980
CviAII CATG 2 cut(s) 317, 623
CviQI GTAC 5 cut(s) 49, 177, 304, 606, 649
DinI GGCGCC 2 cut(s) 322, 709
DpnI GATC 6 cut(s) 228, 311, 833, 871, 900, 1067
DpnII GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
DrdI GACNNNNNNGTC 1 cut(s) 701
DseDI GACNNNNNNGTC 1 cut(s) 701
EaeI YGGCCR 1 cut(s) 313
Eam1104I CTCTTC 2 cut(s) 200, 528
EarI CTCTTC 2 cut(s) 200, 528
Ecl136II GAGCTC 2 cut(s) 412, 1309
Eco130I CCWWGG 4 cut(s) 316, 357, 415, 853
Eco24I GRGCYC 3 cut(s) 414, 622, 1311
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 3 cut(s) 277, 1055, 1118
Eco53kI GAGCTC 2 cut(s) 412, 1309
Eco72I CACGTG 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 422
EcoICRI GAGCTC 2 cut(s) 412, 1309
EcoNI CCTNNNNNAGG 1 cut(s) 881
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 1 cut(s) 398
EcoT14I CCWWGG 4 cut(s) 316, 357, 415, 853
EcoT22I ATGCAT 1 cut(s) 628
EcoT38I GRGCYC 3 cut(s) 414, 622, 1311
EgeI GGCGCC 2 cut(s) 322, 709
EheI GGCGCC 2 cut(s) 322, 709
ErhI CCWWGG 4 cut(s) 316, 357, 415, 853
FaeI CATG 2 cut(s) 320, 626
FaiI YATR 6 cut(s) 318, 588, 615, 624, 680, 1124
FalI AAGNNNNNCTT 4 cut(s) 318, 350, 879, 911
FaqI GGGAC 3 cut(s) 339, 363, 1171
FatI CATG 2 cut(s) 316, 622
Fnu4HI GCNGC 5 cut(s) 285, 738, 987, 1195, 1239
FokI GGATG 4 cut(s) 38, 257, 751, 1051
FriOI GRGCYC 3 cut(s) 414, 622, 1311
Fsp4HI GCNGC 5 cut(s) 285, 738, 987, 1195, 1239
FspBI CTAG 3 cut(s) 12, 168, 273
GlaI GCGC 4 cut(s) 19, 283, 322, 709
GluI GCNGC 5 cut(s) 285, 738, 987, 1195, 1239
GsaI CCCAGC 1 cut(s) 1257
GsuI CTGGAG 1 cut(s) 1308
HaeII RGCGCY 2 cut(s) 324, 711
HaeIII GGCC 4 cut(s) 315, 730, 851, 926
HapII CCGG 1 cut(s) 1332
HhaI GCGC 4 cut(s) 20, 284, 323, 710
Hin1I GRCGYC 3 cut(s) 321, 352, 708
Hin1II CATG 2 cut(s) 320, 626
Hin6I GCGC 4 cut(s) 18, 282, 321, 708
HinP1I GCGC 4 cut(s) 18, 282, 321, 708
HincII GTYRAC 1 cut(s) 805
HindII GTYRAC 1 cut(s) 805
HindIII AAGCTT 4 cut(s) 563, 893, 1178, 1300
HinfI GANTC 6 cut(s) 420, 672, 785, 1061, 1229, 1335
HpaI GTTAAC 1 cut(s) 805
HpaII CCGG 1 cut(s) 1332
HphI GGTGA 3 cut(s) 464, 1216, 1238
Hpy166II GTNNAC 1 cut(s) 805
Hpy188I TCNGA 2 cut(s) 409, 1220
Hpy188III TCNNGA 7 cut(s) 463, 485, 917, 1028, 1088, 1111, 1346
Hpy8I GTNNAC 1 cut(s) 805
HpyAV CCTTC 9 cut(s) 178, 193, 669, 679, 793, 850, 916, 1243, 1310
HpyCH4III ACNGT 5 cut(s) 109, 380, 446, 1105, 1162
HpyCH4IV ACGT 2 cut(s) 42, 352
HpyCH4V TGCA 8 cut(s) 578, 626, 682, 755, 905, 995, 1184, 1298
HpyF10VI GCNNNNNNNGC 8 cut(s) 394, 409, 575, 617, 992, 1186, 1259, 1299
HpySE526I ACGT 2 cut(s) 42, 352
Hsp92I GRCGYC 3 cut(s) 321, 352, 708
Hsp92II CATG 2 cut(s) 320, 626
HspAI GCGC 4 cut(s) 18, 282, 321, 708
KasI GGCGCC 2 cut(s) 320, 707
KspAI GTTAAC 1 cut(s) 805
Kzo9I GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
LmnI GCTCC 4 cut(s) 25, 417, 507, 1314
Lsp1109I GCAGC 2 cut(s) 724, 973
LweI GCATC 4 cut(s) 586, 635, 982, 1342
MaeI CTAG 3 cut(s) 12, 168, 273
MaeII ACGT 2 cut(s) 42, 352
MaeIII GTNAC 4 cut(s) 364, 909, 1204, 1226
MalI GATC 6 cut(s) 228, 311, 833, 871, 900, 1067
MbiI CCGCTC 1 cut(s) 1194
MboI GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
MboII GAAGA 6 cut(s) 217, 545, 550, 864, 899, 1279
MflI RGATCY 1 cut(s) 869
MhlI GDGCHC 5 cut(s) 294, 399, 414, 622, 1311
MluCI AATT 2 cut(s) 467, 551
Mly113I GGCGCC 2 cut(s) 321, 708
MlyI GAGTC 4 cut(s) 414, 1055, 1223, 1344
MmeI TCCRAC 4 cut(s) 279, 774, 847, 1016
Mph1103I ATGCAT 1 cut(s) 628
MseI TTAA 4 cut(s) 84, 429, 804, 1357
MspA1I CMGCKG 1 cut(s) 1241
MspI CCGG 1 cut(s) 1332
MspR9I CCNGG 2 cut(s) 400, 1332
Mva1269I GAATGC 1 cut(s) 859
MvaI CCWGG 1 cut(s) 400
MvnI CGCG 1 cut(s) 282
MwoI GCNNNNNNNGC 8 cut(s) 394, 409, 575, 617, 992, 1186, 1259, 1299
NarI GGCGCC 2 cut(s) 321, 708
NciI CCSGG 1 cut(s) 1332
NcoI CCATGG 1 cut(s) 316
NdeII GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
NlaIII CATG 2 cut(s) 320, 626
NlaIV GGNNCC 3 cut(s) 278, 322, 709
NmuCI GTSAC 3 cut(s) 909, 1204, 1226
NsiI ATGCAT 1 cut(s) 628
PaeR7I CTCGAG 1 cut(s) 422
PcsI WCGNNNNNNNCGW 1 cut(s) 44
PctI GAATGC 1 cut(s) 859
PfeI GAWTC 2 cut(s) 672, 785
PkrI GCNGC 5 cut(s) 286, 739, 988, 1196, 1240
PleI GAGTC 4 cut(s) 414, 1055, 1223, 1343
PluTI GGCGCC 2 cut(s) 324, 711
PmaCI CACGTG 1 cut(s) 43
PmlI CACGTG 1 cut(s) 43
PpsI GAGTC 4 cut(s) 414, 1055, 1223, 1343
Ppu21I YACGTR 1 cut(s) 43
Psp124BI GAGCTC 2 cut(s) 414, 1311
Psp6I CCWGG 1 cut(s) 398
PspCI CACGTG 1 cut(s) 43
PspFI CCCAGC 1 cut(s) 1253
PspGI CCWGG 1 cut(s) 398
PspN4I GGNNCC 3 cut(s) 278, 322, 709
PspPI GGNCC 4 cut(s) 277, 850, 1055, 1118
PspXI VCTCGAGB 1 cut(s) 422
PstNI CAGNNNCTG 1 cut(s) 1019
PsuI RGATCY 1 cut(s) 869
RsaI GTAC 5 cut(s) 50, 178, 305, 607, 650
RsaNI GTAC 5 cut(s) 49, 177, 304, 606, 649
SacI GAGCTC 2 cut(s) 414, 1311
SaqAI TTAA 4 cut(s) 84, 429, 804, 1357
SatI GCNGC 5 cut(s) 285, 738, 987, 1195, 1239
Sau3AI GATC 6 cut(s) 226, 309, 831, 869, 898, 1065
Sau96I GGNCC 4 cut(s) 277, 850, 1055, 1118
ScaI AGTACT 3 cut(s) 178, 305, 650
SchI GAGTC 4 cut(s) 414, 1055, 1223, 1344
ScrFI CCNGG 2 cut(s) 400, 1332
SduI GDGCHC 5 cut(s) 294, 399, 414, 622, 1311
SfaNI GCATC 4 cut(s) 586, 635, 982, 1342
SfoI GGCGCC 2 cut(s) 322, 709
Sfr274I CTCGAG 1 cut(s) 422
SinI GGWCC 3 cut(s) 277, 1055, 1118
SlaI CTCGAG 1 cut(s) 422
SmlI CTYRAG 3 cut(s) 422, 506, 917
SmoI CTYRAG 3 cut(s) 422, 506, 917
Sse9I AATT 2 cut(s) 467, 551
SsiI CCGC 6 cut(s) 280, 285, 750, 1194, 1239, 1293
SspDI GGCGCC 2 cut(s) 320, 707
SspMI CTAG 3 cut(s) 12, 168, 273
SstI GAGCTC 2 cut(s) 414, 1311
StyD4I CCNGG 2 cut(s) 398, 1330
StyI CCWWGG 4 cut(s) 316, 357, 415, 853
TaaI ACNGT 5 cut(s) 109, 380, 446, 1105, 1162
TaiI ACGT 2 cut(s) 45, 355
TaqI TCGA 5 cut(s) 423, 462, 1064, 1134, 1314
TasI AATT 2 cut(s) 467, 551
TatI WGTACW 3 cut(s) 176, 303, 648
TauI GCSGC 3 cut(s) 287, 1197, 1241
TfiI GAWTC 2 cut(s) 672, 785
Tru1I TTAA 4 cut(s) 84, 429, 804, 1357
Tru9I TTAA 4 cut(s) 84, 429, 804, 1357
TscAI CASTG 2 cut(s) 268, 1084
TseFI GTSAC 3 cut(s) 909, 1204, 1226
TseI GCWGC 2 cut(s) 737, 986
Tsp45I GTSAC 3 cut(s) 909, 1204, 1226
TspDTI ATGAA 1 cut(s) 118
TspGWI ACGGA 2 cut(s) 652, 1131
TspRI CASTG 2 cut(s) 268, 1084
VpaK11BI GGWCC 3 cut(s) 277, 1055, 1118
XagI CCTNNNNNAGG 1 cut(s) 881
XapI RAATTY 1 cut(s) 551
XcmI CCANNNNNNNNNTGG 1 cut(s) 1283
XhoI CTCGAG 1 cut(s) 422
XspI CTAG 3 cut(s) 12, 168, 273
ZraI GACGTC 1 cut(s) 353
ZrmI AGTACT 3 cut(s) 178, 305, 650
Zsp2I ATGCAT 1 cut(s) 628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.