Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005365

Physical Location & Seq

Genomic Coordinates Forward (+)

42274224 .. 42278934

Gene Structure 4711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1291100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGAGGGTTCTGTTGCTCAGCAACACCACACTCTCACTCTCACCGCCGCCGTTATCGGAAACCCTAAAATCCCCGATTCGATCCAATTTCAAGCGAAATTCGATCAATTGGGCCGAGAAAGCTCTTGTTGGAGCCCTAGGTGGGGCCCTGTCGCTCTGTCTTCTGGTCTCTTCGCCTTCGCCTTCCATAGCAATTGAGCCTTCTCCTTCTTCTTCTCCGCCGTCGACTGAGTATTGCCGCGAGGAGGAAGGAGGTGAAGCGGCGGAGTTTTTGGTGCCCGAAGCAGCGGCGGCGGTGACCAATGAGGGGATTGTGGAGGAGGCTTGGGAAATTGTCAATGACAGCTTTATCAACACCGGCCGCTTGAGCTCGTTCCCTGAAACTTGGCAGAGGAAAAAGGAAGACATAAGAAGTAGTTCAATAAAGACAAGAGCTAAGGCTCATGATATGATTAAGCGAATGTTGGCCAGCTTGGGTGACCCTTATACGCGATTTCTTTCCCCCGAAGAGTTCTCCAAGATGGCGAGGTATGACATGAGTGGTATTGGAATAAACCTCAGGGAAGTCCCAGATGAAAACGGAGATGTGAAAGTGAAGGTACTAGGACTTGTACTGGATGGTCCTGCACAATCTGCAGGTGTGAGACAGGGGGATGAAGTACTAGCTGTTAATGGATTGGATGTGAAAGGGAAGTCAGCTTTTGAAGTATCATCATTGATGCAAGGCCCTAACGAGACGTTCGTTACTATTAAGGTCAAGCATGGCAATTGTGGGCCTATTCAGTCTATTGAAGTCCAAAGACAACTTGTTGCTCGAACCCCTGTCTTTTATCGGTTGGAACAAATAGAAAATGGAACCAGATCTGTTGGATACATGCGAGTAAAAGAGTTCAATGCATTGGCTAGAAAGGACTTGGTAATTGCTATGAAGCGGCTTCAGGACATGGGTGCCTCATACTTCATTCTGGATCTTAGAGATAATCGTGGTGGACTAGTACAGGCTGGAATAGAAATTGCCAAGCTATTTCTAAATCAAGGGGAGACGGTGATTTATACTGACGGGAAGGATCCCGAATACCAACAAAGCATCGTTGCAGATACTACACCATTAGTTACAGCACCTGTTATTGTTTTGGTGAACAACAATACTGCTAGTGCAAGTGAAATTGTTGCTTCCGCTTTGCATGATAATTGTAGAGGGGTTCTTGTGGGTGAACGGACATTTGGCAAGGGTTTAATTCAATCTGTATTTGAACTTCGTGATGGCTCCGGCGTGGTTGTAACTGTTGGGAAGTATGTCACGCCAAAACACAAGGACATTAATGGCAACGGAATAGAGCCTGATTTTCGAAAATTCCCAGCATGGAGTGACGTCACGCAACGTCTTTCACAGTGCAGCATGCTTCAGCGGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009579 GO:0016787 GO:0019538 GO:0031977 GO:0043170 GO:0044238 GO:0044424 GO:0044436 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

472

Amino Acids

51.32

Weight (kDa)

6.01

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZ	PF00595	179 - 251	6.6e-06	PDZ domain
PDZ_6	PF17820	206 - 253	7.7e-08	PDZ domain
Peptidase_S41	PF03572	289 - 449	4e-50	Peptidase family S41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46390 AT5G46390
fragaria_vesca	FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310
malus_domestica	MD05G1291100.v1.1
prunus_persica	Prupe.4G074500_v2.0.a1
pyrus_communis	pycom05g26760
rosa_chinensis	RchiOBHm_Chr5g0013001
rosa_laevigata	RLG00000031976
rosa_multiflora	Rmu_sc0003892.1_g000023 Rmu_sc0005409.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063570
rosa_rugosa	Rorug05G0006100 Rorug05G0006100
rosa_samantha	Rh5AG100600 Rh5BG097000 Rh5CG109200 Rh5DG095800
rosa_wichuraiana	Rw5G008770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	626
AatII	GACGTC	1 cut(s)	1374
Acc36I	ACCTGC	1 cut(s)	626
AccB1I	GGYRCC	2 cut(s)	274, 947
AccI	GTMKAC	1 cut(s)	224
AccII	CGCG	2 cut(s)	240, 490
AclWI	GGATC	4 cut(s)	75, 975, 1061, 1074
AcoI	YGGCCR	2 cut(s)	358, 465
AcsI	RAATTY	2 cut(s)	97, 1352
AcuI	CTGAAG	2 cut(s)	920, 1388
AcyI	GRCGYC	1 cut(s)	1371
AfaI	GTAC	4 cut(s)	600, 612, 660, 996
AfiI	CCNNNNNNNGG	4 cut(s)	141, 142, 244, 306
AgsI	TTSAA	7 cut(s)	91, 420, 704, 791, 892, 1241, 1253
AhlI	ACTAGT	1 cut(s)	991
AjuI	GAANNNNNNNTTGG	2 cut(s)	1206, 1238
AluBI	AGCT	8 cut(s)	122, 345, 369, 434, 471, 665, 698, 1021
AluI	AGCT	8 cut(s)	122, 345, 369, 434, 471, 665, 698, 1021
Alw21I	GWGCWC	1 cut(s)	371
Alw26I	GTCTC	4 cut(s)	172, 637, 728, 1034
AlwI	GGATC	4 cut(s)	75, 975, 1061, 1074
AlwNI	CAGNNNCTG	1 cut(s)	1121
AoxI	GGCC	6 cut(s)	111, 144, 358, 465, 724, 773
ApaI	GGGCCC	1 cut(s)	148
ApeKI	GCWGC	2 cut(s)	284, 1395
ApoI	RAATTY	2 cut(s)	97, 1352
AseI	ATTAAT	1 cut(s)	1320
Asp700I	GAANNNNTTC	1 cut(s)	415
AspA2I	CCTAGG	1 cut(s)	136
AspS9I	GGNCC	6 cut(s)	111, 144, 145, 620, 725, 773
AsuHPI	GGTGA	7 cut(s)	33, 266, 307, 488, 1057, 1147, 1223
AsuII	TTCGAA	1 cut(s)	1348
AvaII	GGWCC	1 cut(s)	620
AvrII	CCTAGG	1 cut(s)	136
AxyI	CCTNAGG	1 cut(s)	557
BaeGI	GKGCMC	2 cut(s)	148, 279
BalI	TGGCCA	1 cut(s)	467
BamHI	GGATCC	1 cut(s)	1066
BanI	GGYRCC	2 cut(s)	274, 947
BanII	GRGCYC	3 cut(s)	136, 148, 371
BarI	GAAGNNNNNNTAC	2 cut(s)	1239, 1271
BbsI	GAAGAC	2 cut(s)	152, 408
Bbv12I	GWGCWC	1 cut(s)	371
BbvI	GCAGC	2 cut(s)	296, 1407
BccI	CCATC	3 cut(s)	514, 611, 1256
BceAI	ACGGC	2 cut(s)	34, 205
BciVI	GTATCC	1 cut(s)	863
BcoDI	GTCTC	4 cut(s)	172, 637, 728, 1034
BcuI	ACTAGT	1 cut(s)	991
BfaI	CTAG	6 cut(s)	137, 602, 662, 903, 992, 1152
BfmI	CTRYAG	1 cut(s)	633
BfuAI	ACCTGC	1 cut(s)	626
BfuI	GTATCC	1 cut(s)	863
BglII	AGATCT	1 cut(s)	860
BisI	GCNGC	9 cut(s)	47, 238, 261, 285, 288, 291, 361, 932, 1396
BlnI	CCTAGG	1 cut(s)	136
BlpI	GCTNAGC	1 cut(s)	17
BlsI	GCNGC	9 cut(s)	48, 239, 262, 286, 289, 292, 362, 933, 1397
BmcAI	AGTACT	1 cut(s)	660
Bme18I	GGWCC	1 cut(s)	620
BmgT120I	GGNCC	6 cut(s)	111, 144, 145, 620, 725, 773
BmiI	GGNNCC	8 cut(s)	133, 145, 146, 276, 856, 949, 1068, 1267
BmsI	GCATC	2 cut(s)	708, 1095
BpiI	GAAGAC	2 cut(s)	152, 408
Bpu10I	CCTNAGC	1 cut(s)	435
Bpu1102I	GCTNAGC	1 cut(s)	17
Bpu14I	TTCGAA	1 cut(s)	1348
BpuEI	CTTGAG	1 cut(s)	385
BsaHI	GRCGYC	1 cut(s)	1371
BsaI	GGTCTC	1 cut(s)	172
BsaJI	CCNNGG	1 cut(s)	136
Bsc4I	CCNNNNNNNGG	4 cut(s)	141, 142, 244, 306
Bse118I	RCCGGY	1 cut(s)	356
Bse1I	ACTGG	1 cut(s)	618
Bse21I	CCTNAGG	1 cut(s)	557
BseDI	CCNNGG	1 cut(s)	136
BseGI	GGATG	3 cut(s)	622, 658, 685
BseLI	CCNNNNNNNGG	4 cut(s)	141, 142, 244, 306
BseMII	CTCAG	3 cut(s)	31, 219, 571
BseNI	ACTGG	1 cut(s)	618
BseRI	GAGGAG	2 cut(s)	257, 332
BseSI	GKGCMC	2 cut(s)	148, 279
BseX3I	CGGCCG	1 cut(s)	358
BseXI	GCAGC	2 cut(s)	296, 1407
BseYI	CCCAGC	1 cut(s)	1357
BsgI	GTGCAG	2 cut(s)	609, 1414
Bsh1236I	CGCG	2 cut(s)	240, 490
Bsh1285I	CGRYCG	1 cut(s)	361
BshFI	GGCC	6 cut(s)	113, 146, 360, 467, 726, 775
BshNI	GGYRCC	2 cut(s)	274, 947
BsiEI	CGRYCG	1 cut(s)	361
BsiHKAI	GWGCWC	1 cut(s)	371
BsiSI	CCGG	2 cut(s)	357, 1269
BslFI	GGGAC	1 cut(s)	551
BslI	CCNNNNNNNGG	4 cut(s)	141, 142, 244, 306
BsmAI	GTCTC	4 cut(s)	172, 637, 728, 1034
BsmBI	CGTCTC	2 cut(s)	728, 1034
BsmFI	GGGAC	1 cut(s)	551
BsnI	GGCC	6 cut(s)	113, 146, 360, 467, 726, 775
Bso31I	GGTCTC	1 cut(s)	172
Bsp119I	TTCGAA	1 cut(s)	1348
Bsp120I	GGGCCC	1 cut(s)	144
Bsp1286I	GDGCHC	4 cut(s)	136, 148, 279, 371
Bsp143I	GATC	5 cut(s)	80, 102, 860, 967, 1066
Bsp1720I	GCTNAGC	1 cut(s)	17
BspANI	GGCC	6 cut(s)	113, 146, 360, 467, 726, 775
BspCNI	CTCAG	3 cut(s)	30, 220, 570
BspFNI	CGCG	2 cut(s)	240, 490
BspHI	TCATGA	1 cut(s)	442
BspLI	GGNNCC	8 cut(s)	133, 145, 146, 276, 856, 949, 1068, 1267
BspMAI	CTGCAG	1 cut(s)	637
BspMI	ACCTGC	1 cut(s)	626
BspPI	GGATC	4 cut(s)	75, 975, 1061, 1074
BspT104I	TTCGAA	1 cut(s)	1348
BspT107I	GGYRCC	2 cut(s)	274, 947
BspTNI	GGTCTC	1 cut(s)	172
BsrFI	RCCGGY	1 cut(s)	356
BsrI	ACTGG	1 cut(s)	618
BssAI	RCCGGY	1 cut(s)	356
BssECI	CCNNGG	1 cut(s)	136
BssMI	GATC	5 cut(s)	80, 102, 860, 967, 1066
BssNI	GRCGYC	1 cut(s)	1371
BssT1I	CCWWGG	1 cut(s)	136
Bst4CI	ACNGT	3 cut(s)	1045, 1285, 1392
Bst6I	CTCTTC	2 cut(s)	175, 501
BstACI	GRCGYC	1 cut(s)	1371
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstBI	TTCGAA	1 cut(s)	1348
BstC8I	GCNNGC	2 cut(s)	469, 1400
BstDEI	CTNAG	5 cut(s)	17, 228, 435, 557, 971
BstEII	GGTNACC	2 cut(s)	295, 476
BstF5I	GGATG	3 cut(s)	622, 658, 685
BstFNI	CGCG	2 cut(s)	240, 490
BstKTI	GATC	5 cut(s)	83, 105, 863, 970, 1069
BstMAI	GTCTC	4 cut(s)	172, 637, 728, 1034
BstMBI	GATC	5 cut(s)	80, 102, 860, 967, 1066
BstMCI	CGRYCG	1 cut(s)	361
BstMWI	GCNNNNNNNGC	4 cut(s)	119, 290, 366, 632
BstNSI	RCATGY	2 cut(s)	877, 1402
BstPI	GGTNACC	2 cut(s)	295, 476
BstSFI	CTRYAG	1 cut(s)	633
BstSLI	GKGCMC	2 cut(s)	148, 279
BstUI	CGCG	2 cut(s)	240, 490
BstV1I	GCAGC	2 cut(s)	296, 1407
BstV2I	GAAGAC	2 cut(s)	152, 408
BstX2I	RGATCY	3 cut(s)	860, 967, 1066
BstYI	RGATCY	3 cut(s)	860, 967, 1066
BstZI	CGGCCG	1 cut(s)	358
Bsu36I	CCTNAGG	1 cut(s)	557
BsuI	GTATCC	1 cut(s)	863
BsuRI	GGCC	6 cut(s)	113, 146, 360, 467, 726, 775
BtsCI	GGATG	3 cut(s)	622, 658, 685
BtsIMutI	CAGTG	1 cut(s)	1397
BveI	ACCTGC	1 cut(s)	626
Cac8I	GCNNGC	2 cut(s)	469, 1400
CaiI	CAGNNNCTG	1 cut(s)	1121
CciI	TCATGA	1 cut(s)	442
Cfr10I	RCCGGY	1 cut(s)	356
Cfr13I	GGNCC	6 cut(s)	111, 144, 145, 620, 725, 773
Csp6I	GTAC	4 cut(s)	599, 611, 659, 995
CviAII	CATG	8 cut(s)	443, 535, 761, 874, 943, 1184, 1362, 1399
CviQI	GTAC	4 cut(s)	599, 611, 659, 995
DdeI	CTNAG	5 cut(s)	17, 228, 435, 557, 971
DpnI	GATC	5 cut(s)	82, 104, 862, 969, 1068
DpnII	GATC	5 cut(s)	80, 102, 860, 967, 1066
EaeI	YGGCCR	2 cut(s)	358, 465
EagI	CGGCCG	1 cut(s)	358
Eam1104I	CTCTTC	2 cut(s)	175, 501
EarI	CTCTTC	2 cut(s)	175, 501
EciI	GGCGGA	2 cut(s)	207, 278
Ecl136II	GAGCTC	1 cut(s)	369
EclXI	CGGCCG	1 cut(s)	358
Eco130I	CCWWGG	1 cut(s)	136
Eco24I	GRGCYC	3 cut(s)	136, 148, 371
Eco31I	GGTCTC	1 cut(s)	172
Eco47I	GGWCC	1 cut(s)	620
Eco52I	CGGCCG	1 cut(s)	358
Eco53kI	GAGCTC	1 cut(s)	369
Eco57I	CTGAAG	2 cut(s)	920, 1388
Eco81I	CCTNAGG	1 cut(s)	557
Eco91I	GGTNACC	2 cut(s)	295, 476
EcoICRI	GAGCTC	1 cut(s)	369
EcoO109I	RGGNCCY	3 cut(s)	144, 145, 725
EcoO65I	GGTNACC	2 cut(s)	295, 476
EcoT14I	CCWWGG	1 cut(s)	136
EcoT22I	ATGCAT	1 cut(s)	898
EcoT38I	GRGCYC	3 cut(s)	136, 148, 371
ErhI	CCWWGG	1 cut(s)	136
Esp3I	CGTCTC	2 cut(s)	728, 1034
FaeI	CATG	8 cut(s)	446, 538, 764, 877, 946, 1187, 1365, 1402
FaqI	GGGAC	1 cut(s)	551
FatI	CATG	8 cut(s)	442, 534, 760, 873, 942, 1183, 1361, 1398
FauI	CCCGC	1 cut(s)	1401
FblI	GTMKAC	1 cut(s)	224
Fnu4HI	GCNGC	9 cut(s)	47, 238, 261, 285, 288, 291, 361, 932, 1396
FokI	GGATG	3 cut(s)	629, 665, 692
FriOI	GRGCYC	3 cut(s)	136, 148, 371
Fsp4HI	GCNGC	9 cut(s)	47, 238, 261, 285, 288, 291, 361, 932, 1396
FspBI	CTAG	6 cut(s)	137, 602, 662, 903, 992, 1152
GluI	GCNGC	9 cut(s)	47, 238, 261, 285, 288, 291, 361, 932, 1396
GsaI	CCCAGC	1 cut(s)	1361
HaeIII	GGCC	6 cut(s)	113, 146, 360, 467, 726, 775
HapII	CCGG	2 cut(s)	357, 1269
Hin1I	GRCGYC	1 cut(s)	1371
Hin1II	CATG	8 cut(s)	446, 538, 764, 877, 946, 1187, 1365, 1402
HincII	GTYRAC	1 cut(s)	225
HindII	GTYRAC	1 cut(s)	225
HinfI	GANTC	1 cut(s)	76
HpaII	CCGG	2 cut(s)	357, 1269
HphI	GGTGA	7 cut(s)	33, 266, 307, 488, 1057, 1147, 1223
Hpy166II	GTNNAC	4 cut(s)	225, 989, 1138, 1214
Hpy188I	TCNGA	1 cut(s)	58
Hpy188III	TCNNGA	5 cut(s)	443, 938, 965, 1070, 1259
Hpy8I	GTNNAC	4 cut(s)	225, 989, 1138, 1214
Hpy99I	CGWCG	1 cut(s)	226
HpyAV	CCTTC	7 cut(s)	186, 192, 210, 216, 242, 589, 1057
HpyCH4III	ACNGT	3 cut(s)	1045, 1285, 1392
HpyCH4IV	ACGT	3 cut(s)	737, 1371, 1381
HpyCH4V	TGCA	8 cut(s)	626, 635, 721, 896, 1094, 1157, 1183, 1395
HpyF10VI	GCNNNNNNNGC	4 cut(s)	119, 290, 366, 632
HpyF3I	CTNAG	5 cut(s)	17, 228, 435, 557, 971
HpySE526I	ACGT	3 cut(s)	737, 1371, 1381
Hsp92I	GRCGYC	1 cut(s)	1371
Hsp92II	CATG	8 cut(s)	446, 538, 764, 877, 946, 1187, 1365, 1402
Kzo9I	GATC	5 cut(s)	80, 102, 860, 967, 1066
LmnI	GCTCC	2 cut(s)	131, 1271
Lsp1109I	GCAGC	2 cut(s)	296, 1407
LweI	GCATC	2 cut(s)	708, 1095
MaeI	CTAG	6 cut(s)	137, 602, 662, 903, 992, 1152
MaeII	ACGT	3 cut(s)	737, 1371, 1381
MaeIII	GTNAC	8 cut(s)	295, 476, 742, 1111, 1279, 1297, 1367, 1372
MalI	GATC	5 cut(s)	82, 104, 862, 969, 1068
MboI	GATC	5 cut(s)	80, 102, 860, 967, 1066
MboII	GAAGA	6 cut(s)	152, 162, 201, 204, 413, 518
MfeI	CAATTG	3 cut(s)	106, 192, 766
MflI	RGATCY	3 cut(s)	860, 967, 1066
MhlI	GDGCHC	4 cut(s)	136, 148, 279, 371
MlsI	TGGCCA	1 cut(s)	467
MluNI	TGGCCA	1 cut(s)	467
MmeI	TCCRAC	3 cut(s)	109, 816, 847
Mox20I	TGGCCA	1 cut(s)	467
Mph1103I	ATGCAT	1 cut(s)	898
MroXI	GAANNNNTTC	1 cut(s)	415
MscI	TGGCCA	1 cut(s)	467
MseI	TTAA	5 cut(s)	453, 669, 750, 1235, 1320
Msp20I	TGGCCA	1 cut(s)	467
MspA1I	CMGCKG	2 cut(s)	287, 1408
MspI	CCGG	2 cut(s)	357, 1269
MunI	CAATTG	3 cut(s)	106, 192, 766
MvnI	CGCG	2 cut(s)	240, 490
MwoI	GCNNNNNNNGC	4 cut(s)	119, 290, 366, 632
NdeII	GATC	5 cut(s)	80, 102, 860, 967, 1066
NlaIII	CATG	8 cut(s)	446, 538, 764, 877, 946, 1187, 1365, 1402
NlaIV	GGNNCC	8 cut(s)	133, 145, 146, 276, 856, 949, 1068, 1267
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	5 cut(s)	295, 476, 1297, 1367, 1372
NsiI	ATGCAT	1 cut(s)	898
NspI	RCATGY	2 cut(s)	877, 1402
NspV	TTCGAA	1 cut(s)	1348
PaeI	GCATGC	1 cut(s)	1402
PagI	TCATGA	1 cut(s)	442
PaqCI	CACCTGC	1 cut(s)	626
PcsI	WCGNNNNNNNCGW	1 cut(s)	738
PdmI	GAANNNNTTC	1 cut(s)	415
PfeI	GAWTC	1 cut(s)	76
PkrI	GCNGC	9 cut(s)	48, 239, 262, 286, 289, 292, 362, 933, 1397
PshBI	ATTAAT	1 cut(s)	1320
Psp124BI	GAGCTC	1 cut(s)	371
PspEI	GGTNACC	2 cut(s)	295, 476
PspFI	CCCAGC	1 cut(s)	1357
PspN4I	GGNNCC	8 cut(s)	133, 145, 146, 276, 856, 949, 1068, 1267
PspOMI	GGGCCC	1 cut(s)	144
PspPI	GGNCC	6 cut(s)	111, 144, 145, 620, 725, 773
PstI	CTGCAG	1 cut(s)	637
PstNI	CAGNNNCTG	1 cut(s)	1121
PsuI	RGATCY	3 cut(s)	860, 967, 1066
RsaI	GTAC	4 cut(s)	600, 612, 660, 996
RsaNI	GTAC	4 cut(s)	599, 611, 659, 995
SacI	GAGCTC	1 cut(s)	371
SalI	GTCGAC	1 cut(s)	223
SaqAI	TTAA	5 cut(s)	453, 669, 750, 1235, 1320
SatI	GCNGC	9 cut(s)	47, 238, 261, 285, 288, 291, 361, 932, 1396
Sau3AI	GATC	5 cut(s)	80, 102, 860, 967, 1066
Sau96I	GGNCC	6 cut(s)	111, 144, 145, 620, 725, 773
ScaI	AGTACT	1 cut(s)	660
SduI	GDGCHC	4 cut(s)	136, 148, 279, 371
SfaNI	GCATC	2 cut(s)	708, 1095
SfcI	CTRYAG	1 cut(s)	633
SfuI	TTCGAA	1 cut(s)	1348
SinI	GGWCC	1 cut(s)	620
SmlI	CTYRAG	1 cut(s)	364
SmoI	CTYRAG	1 cut(s)	364
SpeI	ACTAGT	1 cut(s)	991
SphI	GCATGC	1 cut(s)	1402
SspMI	CTAG	6 cut(s)	137, 602, 662, 903, 992, 1152
SstI	GAGCTC	1 cut(s)	371
StyI	CCWWGG	1 cut(s)	136
TaaI	ACNGT	3 cut(s)	1045, 1285, 1392
TaiI	ACGT	3 cut(s)	740, 1374, 1384
TaqI	TCGA	5 cut(s)	79, 101, 224, 814, 1348
TatI	WGTACW	3 cut(s)	610, 658, 994
TauI	GCSGC	7 cut(s)	49, 240, 263, 290, 293, 363, 934
TfiI	GAWTC	1 cut(s)	76
Tru1I	TTAA	5 cut(s)	453, 669, 750, 1235, 1320
Tru9I	TTAA	5 cut(s)	453, 669, 750, 1235, 1320
TscAI	CASTG	1 cut(s)	1397
TseFI	GTSAC	5 cut(s)	295, 476, 1297, 1367, 1372
TseI	GCWGC	2 cut(s)	284, 1395
Tsp45I	GTSAC	5 cut(s)	295, 476, 1297, 1367, 1372
TspDTI	ATGAA	4 cut(s)	588, 669, 941, 949
TspGWI	ACGGA	3 cut(s)	594, 1231, 1344
TspRI	CASTG	1 cut(s)	1397
VpaK11BI	GGWCC	1 cut(s)	620
VspI	ATTAAT	1 cut(s)	1320
XapI	RAATTY	2 cut(s)	97, 1352
XceI	RCATGY	2 cut(s)	877, 1402
XmaJI	CCTAGG	1 cut(s)	136
XmiI	GTMKAC	1 cut(s)	224
XmnI	GAANNNNTTC	1 cut(s)	415
XspI	CTAG	6 cut(s)	137, 602, 662, 903, 992, 1152
ZraI	GACGTC	1 cut(s)	1372
ZrmI	AGTACT	1 cut(s)	660
Zsp2I	ATGCAT	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.