Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005365

Physical Location & Seq

Genomic Coordinates Forward (+)

27922023 .. 27926511

Gene Structure 4489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g26760.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTTCGACAATCCAACACTTGGCAACCGAGGGATGGACAGTCGGACACCTACTCAACAGCTGGCCCTGGCCCACCGCTGTCCGTTCTACCCCGGGACTGGATTAAACTCCCACACGCACCCAAACAGGCCCCCTTCCCACGTGTCAAACTGTCACAAAGGTCAAAACGCCGAGGAGAAGAAGATGAGGGTTCTGTTGCTCAGCAACACCACACTCTCACTCTCACCACCGCCCTTATCGGAAACCCTAAAATCCCCGATTCGATCTAATTTCAAGCGAAATTCGATCAATTGGGCCGAGAAAGCTCTTGTTGGAGCCGTAGGTGGGGCTCTGTCGCTCTGTCTTTTGGTCTCTTCGCCTTCGCCTTCCATAGCAATTGAGCCTTCTCCTTCTTCTTCTCCGCCGTCGACGGAGTATTGTCGCGAGGAAGAAGGAGGTGAAGCGGCGGAGTTTTTGGTGCCCGAAGCAGCGGCGGCGGTGACCAATGAGGGGATTGTGGAGGAGGCTTGGGAAATTGTCAATGACAGCTTTATCAACACCGGCCGCTTGAGCTCATTCCCTGAAACTTGGCAGAGGAAAAAGGAAGACATAAGAAGTAGTTCAATAAAGACAAGAGCTAAGGCTCATGATATGATTAAGCGAATGTTGGCCAGCTTGGGTGACCCTTATACGCGATTTCTTTCCCCAGAAGAGTTCTCCAAGATGGCGAGGTATGACATGAGTGGTATTGGAATAAACCTCAGGGAAGTCCCAGATGAAAACGGAGATGTGAAAGTGAAGGTACTAGGACTTGTACTGGATGGTCCTGCACAATCTGCAGGTGTGAGACAGGGGGATGAAGTACTAGCTGTTAATGGATTGGATGTGAAGGGGAAATCAGCTTTCGAAGTATCATCATTGATGCAAGGCCCTAACGAGACGTTCGTTACTATTAAGGTCAAGCATGGCAATTGTGGGCCTATTCAGTCTATTGAAGTCCAAAGACAACTTGTTGCTCGAACCCCTGTCTTTTATCGGTTGGAACAAATAGAAAATGGAACCAGATCTGTTGGATACATGCGAGTAAAAGAGTTCAATGCATTGGCTAGAAAGGACTTGGTAATTGCTATGAAGCGGCTTCAGGACATGGGTGCCTCATACTTCATTCTGGATCTTAGAGATAATCGTGGTGGACTAGTACAGGCTGGAATAGAAATTGCCAAGCTATTTCTAAATCAAGGGGAGACGGTGATTTATACTGACGGGAAGGATCCCGAATACCAACAAAGCATCGTTGCAGATACTGCACCATTAGTTACAGCACCTGTTATTGTTTTGGTGAACAACAATACTGCTAGTGCAAGTGAAATTGTTGCTTCCGCCTTGCATGATAATTGTAGAGGGGTTCTTGTGGGCGAACGGACATTTGGCAAGGGTTTAATTCAATCTGTATTTGAACTTCGTGATGGCTCTGGCGTGGTTGTAACTGTTGGGAAGTATGTCACACCAAAACACAAGGACATAAATGGCAACGGAATAGAGCCTGATTTTCGAAAATTCCCAGCATGGAGTGACGTCACGCAACGTCTTTCACAGTGTAGTATGCTTCAGCGGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009579 GO:0016787 GO:0019538 GO:0031977 GO:0043170 GO:0044238 GO:0044424 GO:0044436 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

533

Amino Acids

58.04

Weight (kDa)

7.12

Isoelectric Point (pI)

44.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46390 AT5G46390
fragaria_vesca	FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310
malus_domestica	MD05G1291100.v1.1
prunus_persica	Prupe.4G074500_v2.0.a1
pyrus_communis	pycom05g26760
rosa_chinensis	RchiOBHm_Chr5g0013001
rosa_laevigata	RLG00000031976
rosa_multiflora	Rmu_sc0003892.1_g000023 Rmu_sc0005409.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063570
rosa_rugosa	Rorug05G0006100 Rorug05G0006100
rosa_samantha	Rh5AG100600 Rh5BG097000 Rh5CG109200 Rh5DG095800
rosa_wichuraiana	Rw5G008770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	809
AatII	GACGTC	1 cut(s)	1557
Acc36I	ACCTGC	1 cut(s)	809
AccB1I	GGYRCC	2 cut(s)	457, 1130
AccB7I	CCANNNNNTGG	1 cut(s)	20
AccI	GTMKAC	1 cut(s)	407
AccII	CGCG	2 cut(s)	423, 673
AclWI	GGATC	3 cut(s)	1158, 1244, 1257
AcoI	YGGCCR	2 cut(s)	541, 648
AcsI	RAATTY	2 cut(s)	280, 1535
AcuI	CTGAAG	2 cut(s)	1103, 1571
AcvI	CACGTG	1 cut(s)	142
AcyI	GRCGYC	1 cut(s)	1554
AfaI	GTAC	4 cut(s)	783, 795, 843, 1179
AfiI	CCNNNNNNNGG	5 cut(s)	20, 34, 98, 324, 489
AflIII	ACRYGT	1 cut(s)	141
AgsI	TTSAA	6 cut(s)	274, 603, 974, 1075, 1424, 1436
AhlI	ACTAGT	1 cut(s)	1174
AjnI	CCWGG	1 cut(s)	66
AjuI	GAANNNNNNNTTGG	2 cut(s)	1389, 1421
AluBI	AGCT	9 cut(s)	61, 305, 528, 552, 617, 654, 848, 881, 1204
AluI	AGCT	9 cut(s)	61, 305, 528, 552, 617, 654, 848, 881, 1204
Alw21I	GWGCWC	1 cut(s)	554
Alw26I	GTCTC	4 cut(s)	355, 820, 911, 1217
AlwI	GGATC	3 cut(s)	1158, 1244, 1257
AlwNI	CAGNNNCTG	2 cut(s)	1283, 1304
Ama87I	CYCGRG	1 cut(s)	92
AoxI	GGCC	8 cut(s)	63, 69, 128, 294, 541, 648, 907, 956
ApeKI	GCWGC	1 cut(s)	467
ApoI	RAATTY	2 cut(s)	280, 1535
Asp700I	GAANNNNTTC	1 cut(s)	598
AspS9I	GGNCC	7 cut(s)	64, 70, 129, 294, 803, 908, 956
AsuC2I	CCSGG	2 cut(s)	93, 94
AsuHPI	GGTGA	6 cut(s)	216, 449, 490, 671, 1240, 1330
AsuII	TTCGAA	2 cut(s)	885, 1531
AvaI	CYCGRG	1 cut(s)	92
AvaII	GGWCC	1 cut(s)	803
AxyI	CCTNAGG	1 cut(s)	740
BaeGI	GKGCMC	1 cut(s)	462
BalI	TGGCCA	1 cut(s)	650
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	2 cut(s)	457, 1130
BanII	GRGCYC	2 cut(s)	331, 554
BarI	GAAGNNNNNNTAC	2 cut(s)	1422, 1454
BbrPI	CACGTG	1 cut(s)	142
BbsI	GAAGAC	1 cut(s)	591
Bbv12I	GWGCWC	1 cut(s)	554
BbvI	GCAGC	1 cut(s)	479
BccI	CCATC	4 cut(s)	28, 697, 794, 1439
BceAI	ACGGC	2 cut(s)	302, 388
BciT130I	CCWGG	1 cut(s)	68
BciVI	GTATCC	1 cut(s)	1046
BcnI	CCSGG	2 cut(s)	93, 94
BcoDI	GTCTC	4 cut(s)	355, 820, 911, 1217
BcuI	ACTAGT	1 cut(s)	1174
BfaI	CTAG	5 cut(s)	785, 845, 1086, 1175, 1335
BfmI	CTRYAG	1 cut(s)	816
BfuAI	ACCTGC	1 cut(s)	809
BfuI	GTATCC	1 cut(s)	1046
BglII	AGATCT	1 cut(s)	1043
BisI	GCNGC	6 cut(s)	444, 468, 471, 474, 544, 1115
BlpI	GCTNAGC	1 cut(s)	200
BlsI	GCNGC	6 cut(s)	445, 469, 472, 475, 545, 1116
BmcAI	AGTACT	1 cut(s)	843
Bme1390I	CCNGG	3 cut(s)	68, 93, 94
Bme18I	GGWCC	1 cut(s)	803
BmeT110I	CYCGRG	1 cut(s)	92
BmgT120I	GGNCC	7 cut(s)	64, 70, 129, 294, 803, 908, 956
BmiI	GGNNCC	6 cut(s)	131, 316, 459, 1039, 1132, 1251
BmrFI	CCNGG	3 cut(s)	68, 93, 94
BmsI	GCATC	2 cut(s)	891, 1278
BpiI	GAAGAC	1 cut(s)	591
Bpu10I	CCTNAGC	1 cut(s)	618
Bpu1102I	GCTNAGC	1 cut(s)	200
Bpu14I	TTCGAA	2 cut(s)	885, 1531
BpuEI	CTTGAG	1 cut(s)	568
BpuMI	CCSGG	2 cut(s)	93, 94
BsaAI	YACGTR	1 cut(s)	142
BsaHI	GRCGYC	1 cut(s)	1554
BsaI	GGTCTC	1 cut(s)	355
BsaJI	CCNNGG	5 cut(s)	28, 66, 91, 92, 171
Bsc4I	CCNNNNNNNGG	5 cut(s)	20, 34, 98, 324, 489
Bse118I	RCCGGY	1 cut(s)	539
Bse1I	ACTGG	2 cut(s)	103, 801
Bse21I	CCTNAGG	1 cut(s)	740
BseBI	CCWGG	1 cut(s)	68
BseDI	CCNNGG	5 cut(s)	28, 66, 91, 92, 171
BseGI	GGATG	4 cut(s)	39, 805, 841, 868
BseLI	CCNNNNNNNGG	5 cut(s)	20, 34, 98, 324, 489
BseMII	CTCAG	2 cut(s)	214, 754
BseNI	ACTGG	2 cut(s)	103, 801
BseRI	GAGGAG	2 cut(s)	188, 515
BseSI	GKGCMC	1 cut(s)	462
BseX3I	CGGCCG	1 cut(s)	541
BseXI	GCAGC	1 cut(s)	479
BseYI	CCCAGC	1 cut(s)	1540
BsgI	GTGCAG	2 cut(s)	792, 1269
Bsh1236I	CGCG	2 cut(s)	423, 673
Bsh1285I	CGRYCG	1 cut(s)	544
BshFI	GGCC	8 cut(s)	65, 71, 130, 296, 543, 650, 909, 958
BshNI	GGYRCC	2 cut(s)	457, 1130
BsiEI	CGRYCG	1 cut(s)	544
BsiHKAI	GWGCWC	1 cut(s)	554
BsiHKCI	CYCGRG	1 cut(s)	92
BsiSI	CCGG	2 cut(s)	93, 540
BslFI	GGGAC	2 cut(s)	109, 734
BslI	CCNNNNNNNGG	5 cut(s)	20, 34, 98, 324, 489
BsmAI	GTCTC	4 cut(s)	355, 820, 911, 1217
BsmBI	CGTCTC	2 cut(s)	911, 1217
BsmFI	GGGAC	2 cut(s)	109, 734
BsnI	GGCC	8 cut(s)	65, 71, 130, 296, 543, 650, 909, 958
Bso31I	GGTCTC	1 cut(s)	355
BsoBI	CYCGRG	1 cut(s)	92
Bsp119I	TTCGAA	2 cut(s)	885, 1531
Bsp1286I	GDGCHC	3 cut(s)	331, 462, 554
Bsp143I	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
Bsp1720I	GCTNAGC	1 cut(s)	200
Bsp68I	TCGCGA	1 cut(s)	423
BspANI	GGCC	8 cut(s)	65, 71, 130, 296, 543, 650, 909, 958
BspCNI	CTCAG	2 cut(s)	213, 753
BspFNI	CGCG	2 cut(s)	423, 673
BspHI	TCATGA	1 cut(s)	625
BspLI	GGNNCC	6 cut(s)	131, 316, 459, 1039, 1132, 1251
BspMAI	CTGCAG	1 cut(s)	820
BspMI	ACCTGC	1 cut(s)	809
BspPI	GGATC	3 cut(s)	1158, 1244, 1257
BspT104I	TTCGAA	2 cut(s)	885, 1531
BspT107I	GGYRCC	2 cut(s)	457, 1130
BspTNI	GGTCTC	1 cut(s)	355
BsrFI	RCCGGY	1 cut(s)	539
BsrI	ACTGG	2 cut(s)	103, 801
BssAI	RCCGGY	1 cut(s)	539
BssECI	CCNNGG	5 cut(s)	28, 66, 91, 92, 171
BssMI	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
BssNI	GRCGYC	1 cut(s)	1554
Bst2UI	CCWGG	1 cut(s)	68
Bst4CI	ACNGT	5 cut(s)	41, 152, 1228, 1468, 1575
Bst6I	CTCTTC	2 cut(s)	358, 684
BstACI	GRCGYC	1 cut(s)	1554
BstAPI	GCANNNNNTGC	2 cut(s)	815, 1283
BstBAI	YACGTR	1 cut(s)	142
BstBI	TTCGAA	2 cut(s)	885, 1531
BstC8I	GCNNGC	2 cut(s)	63, 652
BstDEI	CTNAG	4 cut(s)	200, 618, 740, 1154
BstEII	GGTNACC	2 cut(s)	478, 659
BstF5I	GGATG	4 cut(s)	39, 805, 841, 868
BstFNI	CGCG	2 cut(s)	423, 673
BstKTI	GATC	5 cut(s)	266, 288, 1046, 1153, 1252
BstMAI	GTCTC	4 cut(s)	355, 820, 911, 1217
BstMBI	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
BstMCI	CGRYCG	1 cut(s)	544
BstMWI	GCNNNNNNNGC	5 cut(s)	302, 473, 549, 815, 1283
BstNI	CCWGG	1 cut(s)	68
BstNSI	RCATGY	1 cut(s)	1060
BstPI	GGTNACC	2 cut(s)	478, 659
BstSCI	CCNGG	3 cut(s)	66, 91, 92
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	1 cut(s)	462
BstUI	CGCG	2 cut(s)	423, 673
BstV1I	GCAGC	1 cut(s)	479
BstV2I	GAAGAC	1 cut(s)	591
BstX2I	RGATCY	3 cut(s)	1043, 1150, 1249
BstYI	RGATCY	3 cut(s)	1043, 1150, 1249
BstZI	CGGCCG	1 cut(s)	541
Bsu36I	CCTNAGG	1 cut(s)	740
BsuI	GTATCC	1 cut(s)	1046
BsuRI	GGCC	8 cut(s)	65, 71, 130, 296, 543, 650, 909, 958
BtsCI	GGATG	4 cut(s)	39, 805, 841, 868
BtsIMutI	CAGTG	1 cut(s)	1580
BtuMI	TCGCGA	1 cut(s)	423
BveI	ACCTGC	1 cut(s)	809
Cac8I	GCNNGC	2 cut(s)	63, 652
CaiI	CAGNNNCTG	2 cut(s)	1283, 1304
CciI	TCATGA	1 cut(s)	625
Cfr10I	RCCGGY	1 cut(s)	539
Cfr13I	GGNCC	7 cut(s)	64, 70, 129, 294, 803, 908, 956
Cfr9I	CCCGGG	1 cut(s)	92
Csp6I	GTAC	4 cut(s)	782, 794, 842, 1178
CviAII	CATG	7 cut(s)	626, 718, 944, 1057, 1126, 1367, 1545
CviQI	GTAC	4 cut(s)	782, 794, 842, 1178
DdeI	CTNAG	4 cut(s)	200, 618, 740, 1154
DpnI	GATC	5 cut(s)	265, 287, 1045, 1152, 1251
DpnII	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
EaeI	YGGCCR	2 cut(s)	541, 648
EagI	CGGCCG	1 cut(s)	541
Eam1104I	CTCTTC	2 cut(s)	358, 684
EarI	CTCTTC	2 cut(s)	358, 684
EciI	GGCGGA	3 cut(s)	390, 461, 1348
Ecl136II	GAGCTC	1 cut(s)	552
EclXI	CGGCCG	1 cut(s)	541
Eco24I	GRGCYC	2 cut(s)	331, 554
Eco31I	GGTCTC	1 cut(s)	355
Eco47I	GGWCC	1 cut(s)	803
Eco52I	CGGCCG	1 cut(s)	541
Eco53kI	GAGCTC	1 cut(s)	552
Eco57I	CTGAAG	2 cut(s)	1103, 1571
Eco72I	CACGTG	1 cut(s)	142
Eco81I	CCTNAGG	1 cut(s)	740
Eco88I	CYCGRG	1 cut(s)	92
Eco91I	GGTNACC	2 cut(s)	478, 659
EcoICRI	GAGCTC	1 cut(s)	552
EcoO109I	RGGNCCY	2 cut(s)	129, 908
EcoO65I	GGTNACC	2 cut(s)	478, 659
EcoRII	CCWGG	1 cut(s)	66
EcoT22I	ATGCAT	1 cut(s)	1081
EcoT38I	GRGCYC	2 cut(s)	331, 554
Esp3I	CGTCTC	2 cut(s)	911, 1217
FaeI	CATG	7 cut(s)	629, 721, 947, 1060, 1129, 1370, 1548
FaqI	GGGAC	2 cut(s)	109, 734
FatI	CATG	7 cut(s)	625, 717, 943, 1056, 1125, 1366, 1544
FauI	CCCGC	1 cut(s)	1584
FblI	GTMKAC	1 cut(s)	407
Fnu4HI	GCNGC	6 cut(s)	444, 468, 471, 474, 544, 1115
FokI	GGATG	4 cut(s)	46, 812, 848, 875
FriOI	GRGCYC	2 cut(s)	331, 554
Fsp4HI	GCNGC	6 cut(s)	444, 468, 471, 474, 544, 1115
FspBI	CTAG	5 cut(s)	785, 845, 1086, 1175, 1335
GluI	GCNGC	6 cut(s)	444, 468, 471, 474, 544, 1115
GsaI	CCCAGC	1 cut(s)	1544
HaeIII	GGCC	8 cut(s)	65, 71, 130, 296, 543, 650, 909, 958
HapII	CCGG	2 cut(s)	93, 540
Hin1I	GRCGYC	1 cut(s)	1554
Hin1II	CATG	7 cut(s)	629, 721, 947, 1060, 1129, 1370, 1548
HincII	GTYRAC	1 cut(s)	408
HindII	GTYRAC	1 cut(s)	408
HinfI	GANTC	1 cut(s)	259
HpaII	CCGG	2 cut(s)	93, 540
HphI	GGTGA	6 cut(s)	216, 449, 490, 671, 1240, 1330
Hpy166II	GTNNAC	3 cut(s)	408, 1172, 1321
Hpy188I	TCNGA	2 cut(s)	45, 241
Hpy188III	TCNNGA	6 cut(s)	422, 626, 1121, 1148, 1253, 1442
Hpy8I	GTNNAC	3 cut(s)	408, 1172, 1321
Hpy99I	CGWCG	2 cut(s)	409, 412
HpyAV	CCTTC	9 cut(s)	144, 369, 375, 393, 399, 425, 772, 862, 1240
HpyCH4III	ACNGT	5 cut(s)	41, 152, 1228, 1468, 1575
HpyCH4IV	ACGT	4 cut(s)	141, 920, 1554, 1564
HpyCH4V	TGCA	8 cut(s)	809, 818, 904, 1079, 1277, 1286, 1340, 1366
HpyF10VI	GCNNNNNNNGC	5 cut(s)	302, 473, 549, 815, 1283
HpyF3I	CTNAG	4 cut(s)	200, 618, 740, 1154
HpySE526I	ACGT	4 cut(s)	141, 920, 1554, 1564
Hsp92I	GRCGYC	1 cut(s)	1554
Hsp92II	CATG	7 cut(s)	629, 721, 947, 1060, 1129, 1370, 1548
Kzo9I	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
LmnI	GCTCC	1 cut(s)	314
Lsp1109I	GCAGC	1 cut(s)	479
LweI	GCATC	2 cut(s)	891, 1278
MaeI	CTAG	5 cut(s)	785, 845, 1086, 1175, 1335
MaeII	ACGT	4 cut(s)	141, 920, 1554, 1564
MaeIII	GTNAC	9 cut(s)	152, 478, 659, 925, 1294, 1462, 1480, 1550, 1555
MalI	GATC	5 cut(s)	265, 287, 1045, 1152, 1251
MboI	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
MboII	GAAGA	8 cut(s)	190, 193, 345, 384, 387, 440, 596, 701
MfeI	CAATTG	3 cut(s)	289, 375, 949
MflI	RGATCY	3 cut(s)	1043, 1150, 1249
MhlI	GDGCHC	3 cut(s)	331, 462, 554
MlsI	TGGCCA	1 cut(s)	650
MluNI	TGGCCA	1 cut(s)	650
MmeI	TCCRAC	5 cut(s)	23, 38, 292, 999, 1030
Mox20I	TGGCCA	1 cut(s)	650
Mph1103I	ATGCAT	1 cut(s)	1081
MroXI	GAANNNNTTC	1 cut(s)	598
MscI	TGGCCA	1 cut(s)	650
MseI	TTAA	5 cut(s)	104, 636, 852, 933, 1418
Msp20I	TGGCCA	1 cut(s)	650
MspA1I	CMGCKG	4 cut(s)	61, 78, 470, 1591
MspI	CCGG	2 cut(s)	93, 540
MspR9I	CCNGG	3 cut(s)	68, 93, 94
MunI	CAATTG	3 cut(s)	289, 375, 949
MvaI	CCWGG	1 cut(s)	68
MvnI	CGCG	2 cut(s)	423, 673
MwoI	GCNNNNNNNGC	5 cut(s)	302, 473, 549, 815, 1283
NciI	CCSGG	2 cut(s)	93, 94
NdeII	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
NlaIII	CATG	7 cut(s)	629, 721, 947, 1060, 1129, 1370, 1548
NlaIV	GGNNCC	6 cut(s)	131, 316, 459, 1039, 1132, 1251
NmeAIII	GCCGAG	2 cut(s)	196, 322
NmuCI	GTSAC	6 cut(s)	152, 478, 659, 1480, 1550, 1555
NruI	TCGCGA	1 cut(s)	423
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	1 cut(s)	1060
NspV	TTCGAA	2 cut(s)	885, 1531
PagI	TCATGA	1 cut(s)	625
PaqCI	CACCTGC	1 cut(s)	809
PcsI	WCGNNNNNNNCGW	1 cut(s)	921
PdmI	GAANNNNTTC	1 cut(s)	598
PfeI	GAWTC	1 cut(s)	259
PflMI	CCANNNNNTGG	1 cut(s)	20
PkrI	GCNGC	6 cut(s)	445, 469, 472, 475, 545, 1116
PmaCI	CACGTG	1 cut(s)	142
PmlI	CACGTG	1 cut(s)	142
Ppu21I	YACGTR	1 cut(s)	142
Psp124BI	GAGCTC	1 cut(s)	554
Psp6I	CCWGG	1 cut(s)	66
PspCI	CACGTG	1 cut(s)	142
PspEI	GGTNACC	2 cut(s)	478, 659
PspFI	CCCAGC	1 cut(s)	1540
PspGI	CCWGG	1 cut(s)	66
PspN4I	GGNNCC	6 cut(s)	131, 316, 459, 1039, 1132, 1251
PspPI	GGNCC	7 cut(s)	64, 70, 129, 294, 803, 908, 956
PstI	CTGCAG	1 cut(s)	820
PstNI	CAGNNNCTG	2 cut(s)	1283, 1304
PsuI	RGATCY	3 cut(s)	1043, 1150, 1249
PvuII	CAGCTG	1 cut(s)	61
RruI	TCGCGA	1 cut(s)	423
RsaI	GTAC	4 cut(s)	783, 795, 843, 1179
RsaNI	GTAC	4 cut(s)	782, 794, 842, 1178
SacI	GAGCTC	1 cut(s)	554
SalI	GTCGAC	1 cut(s)	406
SaqAI	TTAA	5 cut(s)	104, 636, 852, 933, 1418
SatI	GCNGC	6 cut(s)	444, 468, 471, 474, 544, 1115
Sau3AI	GATC	5 cut(s)	263, 285, 1043, 1150, 1249
Sau96I	GGNCC	7 cut(s)	64, 70, 129, 294, 803, 908, 956
ScaI	AGTACT	1 cut(s)	843
ScrFI	CCNGG	3 cut(s)	68, 93, 94
SduI	GDGCHC	3 cut(s)	331, 462, 554
SfaNI	GCATC	2 cut(s)	891, 1278
SfcI	CTRYAG	1 cut(s)	816
SfuI	TTCGAA	2 cut(s)	885, 1531
SgrDI	CGTCGACG	1 cut(s)	406
SinI	GGWCC	1 cut(s)	803
SmaI	CCCGGG	1 cut(s)	94
SmlI	CTYRAG	1 cut(s)	547
SmoI	CTYRAG	1 cut(s)	547
SpeI	ACTAGT	1 cut(s)	1174
SspMI	CTAG	5 cut(s)	785, 845, 1086, 1175, 1335
SstI	GAGCTC	1 cut(s)	554
StyD4I	CCNGG	3 cut(s)	66, 91, 92
TaaI	ACNGT	5 cut(s)	41, 152, 1228, 1468, 1575
TaiI	ACGT	4 cut(s)	144, 923, 1557, 1567
TaqI	TCGA	7 cut(s)	6, 262, 284, 407, 885, 997, 1531
TatI	WGTACW	3 cut(s)	793, 841, 1177
TauI	GCSGC	5 cut(s)	446, 473, 476, 546, 1117
TfiI	GAWTC	1 cut(s)	259
Tru1I	TTAA	5 cut(s)	104, 636, 852, 933, 1418
Tru9I	TTAA	5 cut(s)	104, 636, 852, 933, 1418
TscAI	CASTG	1 cut(s)	1580
TseFI	GTSAC	6 cut(s)	152, 478, 659, 1480, 1550, 1555
TseI	GCWGC	1 cut(s)	467
Tsp45I	GTSAC	6 cut(s)	152, 478, 659, 1480, 1550, 1555
TspDTI	ATGAA	4 cut(s)	771, 852, 1124, 1132
TspGWI	ACGGA	5 cut(s)	72, 425, 777, 1414, 1527
TspMI	CCCGGG	1 cut(s)	92
TspRI	CASTG	1 cut(s)	1580
Van91I	CCANNNNNTGG	1 cut(s)	20
VpaK11BI	GGWCC	1 cut(s)	803
XapI	RAATTY	2 cut(s)	280, 1535
XceI	RCATGY	1 cut(s)	1060
XmaI	CCCGGG	1 cut(s)	92
XmiI	GTMKAC	1 cut(s)	407
XmnI	GAANNNNTTC	1 cut(s)	598
XspI	CTAG	5 cut(s)	785, 845, 1086, 1175, 1335
ZraI	GACGTC	1 cut(s)	1555
ZrmI	AGTACT	1 cut(s)	843
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.