Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005365

Physical Location & Seq

Genomic Coordinates Reverse (-)

8750310 .. 8832016

Gene Structure 81707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG095800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCTGCCCTTATCCAGCTGGCCCATGGGTCCGAAGTCAAACCCGAAGGCCCTAAAGTCCTTAACGGTCGTTAACGGCTTATTTAAGCCCCCCCTTAAAAAAAAAAAAAAAGAAGCTCTGGAATTTTTGAAGAAGAAGAAGATGAGGGTCTTGCTGGTGAGCAACACCACCACACTCTCACTATCTTCCCCGCCGTCACCGAAACCCCTAGCTCCGTCGCGTTTGGGCCCAAACTCGATCCATTGGGCCAAGAAAGCTCTTATTGGAGCCCTAGGCGGGGCTCTATCGCTCGGTCTTCTAGTCTCTTCTCCCGCTTCTCTAGCGCTTGAGTCTTCTTCTCCCTCCTCCATTCCAGCTCAACCTCCTTCTTCTTCTTCAGAGTATTGCAAAGAAGACGACGGTGACGTCATCGCCGAGTCGGCACCGGAGCCGGTGGCGACGAATGAGGGGATTGTGGAGGAGGCTTGGGAGATCGTCAATGACAGCTTTCTCGACTCCGGTCGCCGGAGCTGGCTGCCGGAAAATTGGCAGATGAAGAAGGAAGATATAAGGACTAGTTCAATCAAGACGAGATCAAAGGCTCATGATATGATCAAGAGAATGCTGGCTAGTCTGGGTGATCCTTATACGCGTTTTCTTTCGCCTGATGAGTTCTCCAAGATGGCGAGGTATGACATGAGTGGTATTGGAATAAACCTCAGGGAAGTTCCGGGTGACAATGGAGATGTGAAAGTGAAGGTGCTAGGACTTTTATTGGATGGCCCTGCACATGCGGCTGGTGTGAGGCAGGGAGATGAATTACTAGCTGTTAATGGTGTGGATGTGAAAGGGAAATCAGCCTTTGAAGTGTCATCCTTGATTCAAGGCCCTAATGAAACATATGTTACTATTAAGGTCAAGCATGGCAATTGTGGGCCTATTCAATCTATAGACGTTCAGAGACAACTTGTTGCTCGTACTCCTGTCTTTTATCGGTTGGAGCAAATAGAAAATGGAACCAGATCTGTTGGCTACCTGCGCCTAAAAGAGTTTAATGCATTGGCGAGAAAGGACTTGGTAATTGCTATGAAGCGACTTCAGGACATGGGTGCCTCATTTTTCATCTTGGATCTTAGAGATAATCGTGGTGGACTAGTACAGGCTGGAATAGAAATTGCAAAGCTATTTCTAAATGAAGGAGAAACGGTTATTTATACTGTTGGGAAGGATCCTCAATACCAACAAAATATTGTTGCAGATACTGCACCATTGATTAAAGCTCCTGTTATTGTTCTGGTGAACAACAATACTGCTAGTGCGAGTGAAATTGTTGCTTCAGCGCTTCATGATAACTGTAAAGGTGTTCTTGTGGGTGATCGGACTTTCGGCAAGGGTCTGATTCAATCTGTTTTTGAACTTCAAGATGGTTCTGGCGTGGTTGTGACTGTTGGCAAGTATGTGACACCGAATCATAAGGACATAAATGGAAATGGAATAGAGCCCGATTATCAAAATTTCCCTGGTTGGGGTGACATCACACAACGGCTTTCACAGTGCAGCACACTTCCTAGGGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009579 GO:0016787 GO:0019538 GO:0031977 GO:0043170 GO:0044238 GO:0044424 GO:0044436 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

518

Amino Acids

56.08

Weight (kDa)

8.96

Isoelectric Point (pI)

39.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZ	PF00595	226 - 299	3.5e-07	PDZ domain
PDZ_6	PF17820	253 - 300	5.2e-09	PDZ domain
Peptidase_S41	PF03572	336 - 497	2.2e-49	Peptidase family S41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46390 AT5G46390
fragaria_vesca	FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310 FvH4_3g06310
malus_domestica	MD05G1291100.v1.1
prunus_persica	Prupe.4G074500_v2.0.a1
pyrus_communis	pycom05g26760
rosa_chinensis	RchiOBHm_Chr5g0013001
rosa_laevigata	RLG00000031976
rosa_multiflora	Rmu_sc0003892.1_g000023 Rmu_sc0005409.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063570
rosa_rugosa	Rorug05G0006100 Rorug05G0006100
rosa_samantha	Rh5AG100600 Rh5BG097000 Rh5CG109200 Rh5DG095800
rosa_wichuraiana	Rw5G008770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	404
AatII	GACGTC	1 cut(s)	408
Acc36I	ACCTGC	1 cut(s)	1023
AccB1I	GGYRCC	2 cut(s)	421, 1088
AccII	CGCG	2 cut(s)	220, 631
AciI	CCGC	4 cut(s)	191, 276, 312, 773
AclWI	GGATC	5 cut(s)	232, 614, 1116, 1202, 1215
AcsI	RAATTY	2 cut(s)	122, 1492
AcuI	CTGAAG	3 cut(s)	360, 1061, 1299
AcyI	GRCGYC	1 cut(s)	405
AfaI	GTAC	2 cut(s)	958, 1137
AfeI	AGCGCT	2 cut(s)	324, 1320
AfiI	CCNNNNNNNGG	5 cut(s)	276, 277, 504, 1504, 1505
AflIII	ACRYGT	1 cut(s)	629
AgsI	TTSAA	8 cut(s)	130, 561, 845, 863, 923, 1382, 1394, 1400
AhlI	ACTAGT	2 cut(s)	554, 1132
AjnI	CCWGG	1 cut(s)	1498
Alw26I	GTCTC	2 cut(s)	307, 934
AlwI	GGATC	5 cut(s)	232, 614, 1116, 1202, 1215
AlwNI	CAGNNNCTG	1 cut(s)	1241
Aor51HI	AGCGCT	2 cut(s)	324, 1320
AoxI	GGCC	7 cut(s)	20, 48, 226, 246, 760, 865, 914
ApaI	GGGCCC	1 cut(s)	230
ApeKI	GCWGC	3 cut(s)	4, 514, 1536
ApoI	RAATTY	2 cut(s)	122, 1492
AspA2I	CCTAGG	2 cut(s)	271, 1547
AspLEI	GCGC	3 cut(s)	325, 1020, 1321
AspS9I	GGNCC	9 cut(s)	21, 29, 49, 226, 227, 246, 761, 866, 914
AsuC2I	CCSGG	1 cut(s)	711
AsuHPI	GGTGA	8 cut(s)	169, 189, 413, 629, 725, 1288, 1364, 1520
AvaII	GGWCC	1 cut(s)	29
AvrII	CCTAGG	2 cut(s)	271, 1547
AxyI	CCTNAGG	1 cut(s)	698
BaeGI	GKGCMC	1 cut(s)	230
BamHI	GGATCC	1 cut(s)	1207
BanI	GGYRCC	2 cut(s)	421, 1088
BanII	GRGCYC	4 cut(s)	230, 271, 283, 1482
BbsI	GAAGAC	3 cut(s)	287, 324, 399
BbvI	GCAGC	2 cut(s)	501, 1548
BccI	CCATC	3 cut(s)	655, 752, 1397
BceAI	ACGGC	3 cut(s)	91, 178, 1538
BciT130I	CCWGG	1 cut(s)	1500
BclI	TGATCA	1 cut(s)	591
BcnI	CCSGG	1 cut(s)	711
BcoDI	GTCTC	2 cut(s)	307, 934
BcuI	ACTAGT	2 cut(s)	554, 1132
BfmI	CTRYAG	1 cut(s)	927
BfoI	RGCGCY	2 cut(s)	326, 1322
BfuAI	ACCTGC	1 cut(s)	1023
BglI	GCCNNNNNGGC	1 cut(s)	419
BglII	AGATCT	1 cut(s)	1001
BisI	GCNGC	4 cut(s)	5, 515, 774, 1537
BlnI	CCTAGG	2 cut(s)	271, 1547
BlsI	GCNGC	4 cut(s)	6, 516, 775, 1538
Bme1390I	CCNGG	2 cut(s)	711, 1500
Bme18I	GGWCC	1 cut(s)	29
BmgT120I	GGNCC	9 cut(s)	21, 29, 49, 226, 227, 246, 761, 866, 914
BmiI	GGNNCC	8 cut(s)	30, 228, 268, 423, 429, 997, 1090, 1209
BmrFI	CCNGG	2 cut(s)	711, 1500
BoxI	GACNNNNGTC	1 cut(s)	498
BpiI	GAAGAC	3 cut(s)	287, 324, 399
BpuEI	CTTGAG	1 cut(s)	347
BpuMI	CCSGG	1 cut(s)	711
BsaHI	GRCGYC	1 cut(s)	405
BsaJI	CCNNGG	4 cut(s)	24, 271, 1498, 1547
BsaWI	WCCGGW	2 cut(s)	424, 497
BsaXI	ACNNNNNCTCC	2 cut(s)	1170, 1200
Bsc4I	CCNNNNNNNGG	5 cut(s)	276, 277, 504, 1504, 1505
Bse118I	RCCGGY	1 cut(s)	430
Bse21I	CCTNAGG	1 cut(s)	698
BseBI	CCWGG	1 cut(s)	1500
BseDI	CCNNGG	4 cut(s)	24, 271, 1498, 1547
BseGI	GGATG	3 cut(s)	763, 826, 851
BseLI	CCNNNNNNNGG	5 cut(s)	276, 277, 504, 1504, 1505
BseMII	CTCAG	1 cut(s)	712
BseRI	GAGGAG	2 cut(s)	334, 473
BseSI	GKGCMC	1 cut(s)	230
BseXI	GCAGC	2 cut(s)	501, 1548
BsgI	GTGCAG	3 cut(s)	750, 1227, 1555
Bsh1236I	CGCG	2 cut(s)	220, 631
Bsh1285I	CGRYCG	2 cut(s)	69, 502
BshFI	GGCC	7 cut(s)	22, 50, 228, 248, 762, 867, 916
BshNI	GGYRCC	2 cut(s)	421, 1088
BsiEI	CGRYCG	2 cut(s)	69, 502
BsiSI	CCGG	6 cut(s)	425, 431, 498, 505, 518, 710
BslI	CCNNNNNNNGG	5 cut(s)	276, 277, 504, 1504, 1505
BsmAI	GTCTC	2 cut(s)	307, 934
BsmI	GAATGC	1 cut(s)	606
BsnI	GGCC	7 cut(s)	22, 50, 228, 248, 762, 867, 916
Bsp120I	GGGCCC	1 cut(s)	226
Bsp1286I	GDGCHC	4 cut(s)	230, 271, 283, 1482
Bsp143I	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
Bsp19I	CCATGG	1 cut(s)	24
BspACI	CCGC	4 cut(s)	191, 276, 312, 773
BspANI	GGCC	7 cut(s)	22, 50, 228, 248, 762, 867, 916
BspCNI	CTCAG	1 cut(s)	711
BspFNI	CGCG	2 cut(s)	220, 631
BspHI	TCATGA	2 cut(s)	583, 1324
BspLI	GGNNCC	8 cut(s)	30, 228, 268, 423, 429, 997, 1090, 1209
BspMI	ACCTGC	1 cut(s)	1023
BspPI	GGATC	5 cut(s)	232, 614, 1116, 1202, 1215
BspT107I	GGYRCC	2 cut(s)	421, 1088
BsrFI	RCCGGY	1 cut(s)	430
BssAI	RCCGGY	1 cut(s)	430
BssECI	CCNNGG	4 cut(s)	24, 271, 1498, 1547
BssMI	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
BssNI	GRCGYC	1 cut(s)	405
BssT1I	CCWWGG	3 cut(s)	24, 271, 1547
Bst2UI	CCWGG	1 cut(s)	1500
Bst4CI	ACNGT	7 cut(s)	67, 401, 1186, 1198, 1334, 1426, 1533
Bst6I	CTCTTC	1 cut(s)	310
BstACI	GRCGYC	1 cut(s)	405
BstAPI	GCANNNNNTGC	1 cut(s)	1241
BstC8I	GCNNGC	3 cut(s)	20, 512, 606
BstDEI	CTNAG	2 cut(s)	698, 1112
BstDSI	CCRYGG	1 cut(s)	24
BstF5I	GGATG	3 cut(s)	763, 826, 851
BstFNI	CGCG	2 cut(s)	220, 631
BstH2I	RGCGCY	2 cut(s)	326, 1322
BstHHI	GCGC	3 cut(s)	325, 1020, 1321
BstKTI	GATC	9 cut(s)	240, 474, 575, 594, 622, 1004, 1111, 1210, 1357
BstMAI	GTCTC	2 cut(s)	307, 934
BstMBI	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
BstMCI	CGRYCG	2 cut(s)	69, 502
BstMWI	GCNNNNNNNGC	6 cut(s)	254, 320, 419, 773, 1017, 1241
BstNI	CCWGG	1 cut(s)	1500
BstNSI	RCATGY	1 cut(s)	773
BstPAI	GACNNNNGTC	1 cut(s)	498
BstSCI	CCNGG	2 cut(s)	709, 1498
BstSFI	CTRYAG	1 cut(s)	927
BstSLI	GKGCMC	1 cut(s)	230
BstUI	CGCG	2 cut(s)	220, 631
BstV1I	GCAGC	2 cut(s)	501, 1548
BstV2I	GAAGAC	3 cut(s)	287, 324, 399
BstX2I	RGATCY	3 cut(s)	1001, 1108, 1207
BstYI	RGATCY	3 cut(s)	1001, 1108, 1207
Bsu36I	CCTNAGG	1 cut(s)	698
BsuRI	GGCC	7 cut(s)	22, 50, 228, 248, 762, 867, 916
BtgI	CCRYGG	1 cut(s)	24
BtgZI	GCGATG	1 cut(s)	394
BtsCI	GGATG	3 cut(s)	763, 826, 851
BtsIMutI	CAGTG	1 cut(s)	1538
BveI	ACCTGC	1 cut(s)	1023
Cac8I	GCNNGC	3 cut(s)	20, 512, 606
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	2 cut(s)	583, 1324
CfoI	GCGC	3 cut(s)	325, 1020, 1321
Cfr10I	RCCGGY	1 cut(s)	430
Cfr13I	GGNCC	9 cut(s)	21, 29, 49, 226, 227, 246, 761, 866, 914
Csp6I	GTAC	2 cut(s)	957, 1136
CviAII	CATG	7 cut(s)	25, 584, 676, 770, 902, 1084, 1325
CviQI	GTAC	2 cut(s)	957, 1136
DdeI	CTNAG	2 cut(s)	698, 1112
DpnI	GATC	9 cut(s)	239, 473, 574, 593, 621, 1003, 1110, 1209, 1356
DpnII	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
DrdI	GACNNNNNNGTC	1 cut(s)	404
DseDI	GACNNNNNNGTC	1 cut(s)	404
Eam1104I	CTCTTC	1 cut(s)	310
EarI	CTCTTC	1 cut(s)	310
Eco130I	CCWWGG	3 cut(s)	24, 271, 1547
Eco24I	GRGCYC	4 cut(s)	230, 271, 283, 1482
Eco47I	GGWCC	1 cut(s)	29
Eco47III	AGCGCT	2 cut(s)	324, 1320
Eco57I	CTGAAG	3 cut(s)	360, 1061, 1299
Eco81I	CCTNAGG	1 cut(s)	698
EcoO109I	RGGNCCY	2 cut(s)	49, 866
EcoRII	CCWGG	1 cut(s)	1498
EcoT14I	CCWWGG	3 cut(s)	24, 271, 1547
EcoT22I	ATGCAT	1 cut(s)	1039
EcoT38I	GRGCYC	4 cut(s)	230, 271, 283, 1482
ErhI	CCWWGG	3 cut(s)	24, 271, 1547
FaeI	CATG	7 cut(s)	28, 587, 679, 773, 905, 1087, 1328
FalI	AAGNNNNNCTT	2 cut(s)	1329, 1361
FatI	CATG	7 cut(s)	24, 583, 675, 769, 901, 1083, 1324
FauI	CCCGC	3 cut(s)	198, 269, 319
FauNDI	CATATG	1 cut(s)	880
FbaI	TGATCA	1 cut(s)	591
Fnu4HI	GCNGC	4 cut(s)	5, 515, 774, 1537
FokI	GGATG	3 cut(s)	770, 833, 838
FriOI	GRGCYC	4 cut(s)	230, 271, 283, 1482
Fsp4HI	GCNGC	4 cut(s)	5, 515, 774, 1537
GlaI	GCGC	3 cut(s)	324, 1019, 1320
GluI	GCNGC	4 cut(s)	5, 515, 774, 1537
HaeII	RGCGCY	2 cut(s)	326, 1322
HaeIII	GGCC	7 cut(s)	22, 50, 228, 248, 762, 867, 916
HapII	CCGG	6 cut(s)	425, 431, 498, 505, 518, 710
HhaI	GCGC	3 cut(s)	325, 1020, 1321
Hin1I	GRCGYC	1 cut(s)	405
Hin1II	CATG	7 cut(s)	28, 587, 679, 773, 905, 1087, 1328
Hin6I	GCGC	3 cut(s)	323, 1018, 1319
HinP1I	GCGC	3 cut(s)	323, 1018, 1319
HincII	GTYRAC	1 cut(s)	73
HindII	GTYRAC	1 cut(s)	73
HinfI	GANTC	6 cut(s)	329, 416, 494, 859, 1378, 1447
HpaI	GTTAAC	1 cut(s)	73
HpaII	CCGG	6 cut(s)	425, 431, 498, 505, 518, 710
HphI	GGTGA	8 cut(s)	169, 189, 413, 629, 725, 1288, 1364, 1520
Hpy166II	GTNNAC	3 cut(s)	73, 1130, 1279
Hpy188I	TCNGA	5 cut(s)	33, 379, 939, 1359, 1377
Hpy188III	TCNNGA	8 cut(s)	119, 491, 565, 584, 595, 1079, 1325, 1400
Hpy8I	GTNNAC	3 cut(s)	73, 1130, 1279
Hpy99I	CGWCG	3 cut(s)	220, 401, 442
HpyAV	CCTTC	6 cut(s)	40, 375, 532, 730, 1169, 1198
HpyCH4III	ACNGT	7 cut(s)	67, 401, 1186, 1198, 1334, 1426, 1533
HpyCH4IV	ACGT	2 cut(s)	405, 933
HpyCH4V	TGCA	7 cut(s)	387, 767, 1037, 1157, 1235, 1244, 1536
HpyF10VI	GCNNNNNNNGC	6 cut(s)	254, 320, 419, 773, 1017, 1241
HpyF3I	CTNAG	2 cut(s)	698, 1112
HpySE526I	ACGT	2 cut(s)	405, 933
Hsp92I	GRCGYC	1 cut(s)	405
Hsp92II	CATG	7 cut(s)	28, 587, 679, 773, 905, 1087, 1328
HspAI	GCGC	3 cut(s)	323, 1018, 1319
Ksp22I	TGATCA	1 cut(s)	591
KspAI	GTTAAC	1 cut(s)	73
Kzo9I	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
LmnI	GCTCC	6 cut(s)	217, 266, 427, 507, 979, 1264
Lsp1109I	GCAGC	2 cut(s)	501, 1548
MaeII	ACGT	2 cut(s)	405, 933
MaeIII	GTNAC	7 cut(s)	195, 401, 713, 883, 1420, 1438, 1508
MalI	GATC	9 cut(s)	239, 473, 574, 593, 621, 1003, 1110, 1209, 1356
MboI	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
MfeI	CAATTG	1 cut(s)	907
MflI	RGATCY	3 cut(s)	1001, 1108, 1207
MhlI	GDGCHC	4 cut(s)	230, 271, 283, 1482
MluCI	AATT	8 cut(s)	122, 523, 797, 907, 1059, 1152, 1305, 1492
MluI	ACGCGT	1 cut(s)	629
MlyI	GAGTC	3 cut(s)	338, 425, 488
MmeI	TCCRAC	1 cut(s)	957
Mph1103I	ATGCAT	1 cut(s)	1039
MseI	TTAA	8 cut(s)	62, 72, 84, 96, 810, 891, 1032, 1254
MspA1I	CMGCKG	1 cut(s)	18
MspI	CCGG	6 cut(s)	425, 431, 498, 505, 518, 710
MspR9I	CCNGG	2 cut(s)	711, 1500
MunI	CAATTG	1 cut(s)	907
Mva1269I	GAATGC	1 cut(s)	606
MvaI	CCWGG	1 cut(s)	1500
MvnI	CGCG	2 cut(s)	220, 631
MwoI	GCNNNNNNNGC	6 cut(s)	254, 320, 419, 773, 1017, 1241
NciI	CCSGG	1 cut(s)	711
NcoI	CCATGG	1 cut(s)	24
NdeI	CATATG	1 cut(s)	880
NdeII	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
NlaIII	CATG	7 cut(s)	28, 587, 679, 773, 905, 1087, 1328
NlaIV	GGNNCC	8 cut(s)	30, 228, 268, 423, 429, 997, 1090, 1209
NmeAIII	GCCGAG	1 cut(s)	439
NmuCI	GTSAC	6 cut(s)	195, 401, 713, 1420, 1438, 1508
NsiI	ATGCAT	1 cut(s)	1039
NspI	RCATGY	1 cut(s)	773
PagI	TCATGA	2 cut(s)	583, 1324
PcsI	WCGNNNNNNNCGW	2 cut(s)	402, 411
PctI	GAATGC	1 cut(s)	606
PfeI	GAWTC	3 cut(s)	859, 1378, 1447
PkrI	GCNGC	4 cut(s)	6, 516, 775, 1538
PleI	GAGTC	3 cut(s)	337, 424, 488
PpsI	GAGTC	3 cut(s)	337, 424, 488
PshAI	GACNNNNGTC	1 cut(s)	498
Psp6I	CCWGG	1 cut(s)	1498
PspGI	CCWGG	1 cut(s)	1498
PspN4I	GGNNCC	8 cut(s)	30, 228, 268, 423, 429, 997, 1090, 1209
PspOMI	GGGCCC	1 cut(s)	226
PspPI	GGNCC	9 cut(s)	21, 29, 49, 226, 227, 246, 761, 866, 914
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	3 cut(s)	1001, 1108, 1207
PvuII	CAGCTG	1 cut(s)	18
RsaI	GTAC	2 cut(s)	958, 1137
RsaNI	GTAC	2 cut(s)	957, 1136
SaqAI	TTAA	8 cut(s)	62, 72, 84, 96, 810, 891, 1032, 1254
SatI	GCNGC	4 cut(s)	5, 515, 774, 1537
Sau3AI	GATC	9 cut(s)	237, 471, 572, 591, 619, 1001, 1108, 1207, 1354
Sau96I	GGNCC	9 cut(s)	21, 29, 49, 226, 227, 246, 761, 866, 914
SchI	GAGTC	3 cut(s)	338, 425, 488
ScrFI	CCNGG	2 cut(s)	711, 1500
SduI	GDGCHC	4 cut(s)	230, 271, 283, 1482
SfcI	CTRYAG	1 cut(s)	927
SinI	GGWCC	1 cut(s)	29
SmlI	CTYRAG	1 cut(s)	326
SmoI	CTYRAG	1 cut(s)	326
SpeI	ACTAGT	2 cut(s)	554, 1132
Sse9I	AATT	8 cut(s)	122, 523, 797, 907, 1059, 1152, 1305, 1492
SsiI	CCGC	4 cut(s)	191, 276, 312, 773
SspI	AATATT	1 cut(s)	1228
StyD4I	CCNGG	2 cut(s)	709, 1498
StyI	CCWWGG	3 cut(s)	24, 271, 1547
TaaI	ACNGT	7 cut(s)	67, 401, 1186, 1198, 1334, 1426, 1533
TaiI	ACGT	2 cut(s)	408, 936
TaqI	TCGA	2 cut(s)	236, 492
TaqII	GACCGA	1 cut(s)	281
TasI	AATT	8 cut(s)	122, 523, 797, 907, 1059, 1152, 1305, 1492
TatI	WGTACW	1 cut(s)	1135
TauI	GCSGC	1 cut(s)	776
TfiI	GAWTC	3 cut(s)	859, 1378, 1447
Tru1I	TTAA	8 cut(s)	62, 72, 84, 96, 810, 891, 1032, 1254
Tru9I	TTAA	8 cut(s)	62, 72, 84, 96, 810, 891, 1032, 1254
TscAI	CASTG	1 cut(s)	1538
TseFI	GTSAC	6 cut(s)	195, 401, 713, 1420, 1438, 1508
TseI	GCWGC	3 cut(s)	4, 514, 1536
Tsp45I	GTSAC	6 cut(s)	195, 401, 713, 1420, 1438, 1508
TspDTI	ATGAA	7 cut(s)	548, 810, 888, 1082, 1090, 1188, 1313
TspGWI	ACGGA	1 cut(s)	204
TspRI	CASTG	1 cut(s)	1538
VpaK11BI	GGWCC	1 cut(s)	29
XapI	RAATTY	2 cut(s)	122, 1492
XceI	RCATGY	1 cut(s)	773
XcmI	CCANNNNNNNNNTGG	1 cut(s)	22
XmaJI	CCTAGG	2 cut(s)	271, 1547
ZraI	GACGTC	1 cut(s)	406
Zsp2I	ATGCAT	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.