MD06G1038200.v1.1

Multiple myeloma tumor-associated protein 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0007359
Physical Location & Seq
Forward (+)
4896744 .. 4901329
4586 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1038200.v1.1.491

Sequence Viewer

Length: 675 bp
ATGTATCATCCCACTAGAGGCGGTGTTCGTGGCGGTCGAGATCAATTCAGTTGGGACGATGTTAAGGTTGATAAACATCGAGAGAACTACCTTGGTCACAGCATCAAGGCGCCTGTGGGAAGATGGCAAAAAGGTAAAGATCTACACTGGTATACTAGAGACAAAAATGCTCAGAAGGCAGAAATGGATGCTGCAAAAGAAGAGATCAAGAGGATTAAGGAAGAGGAGGAGCAGGCTATGAGGGAGGCTCTTGGCTTAGCTCCTAAGCGTGCAAGCCGTGCTCAAGGTAGTCGGCTTGATAAGCATGAGTTTTCGGAACTTGTGAAACGAGGCTCTACTGCAGAGGACGTAGGTGAAGGGCACGCTGAAGCAGCACGTGTGCATGGTCTTGGATTTGCAAGAGCACCCTGCCCTTGGGATGAGTCAAGTTCTCTTAATCCAACAGCGAAGGATGTTCCACCTGAAATGGGAAAGTTGGATGTTCCTAATTCACCACCAAAAGAAAAAGTTGAAGAGGAGCTAGAGGATGAAAGCAGTCGAAAGAAGAGGAGGCGTGATGAGAGAAAGCAGGAGAAACATGAGAGGCGTGAAAAGCATGGGAAACATCCCTCAGATGAGAGGAGGAAACACAGGAAACACAAGGAGAAGAGAAGACATGGTTCCGACTCCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MMtag

Protein Analysis

225

Amino Acids

25.95

Weight (kDa)

9.42

Isoelectric Point (pI)

60.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMtag PF10159 8 - 85 1.6e-35 Multiple myeloma tumor-associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 109
AccI GTMKAC 1 cut(s) 152
AciI CCGC 2 cut(s) 21, 33
AcuI CTGAAG 1 cut(s) 387
AcvI CACGTG 1 cut(s) 377
AcyI GRCGYC 1 cut(s) 110
AfiI CCNNNNNNNGG 3 cut(s) 17, 414, 467
AflIII ACRYGT 1 cut(s) 376
AgsI TTSAA 1 cut(s) 512
AluBI AGCT 2 cut(s) 260, 520
AluI AGCT 2 cut(s) 260, 520
Alw21I GWGCWC 2 cut(s) 283, 406
Alw26I GTCTC 1 cut(s) 153
ApeKI GCWGC 2 cut(s) 191, 371
AspLEI GCGC 1 cut(s) 112
AsuHPI GGTGA 2 cut(s) 365, 483
BaeGI GKGCMC 1 cut(s) 363
BanI GGYRCC 1 cut(s) 109
BbrPI CACGTG 1 cut(s) 377
BbsI GAAGAC 1 cut(s) 658
Bbv12I GWGCWC 2 cut(s) 283, 406
BbvI GCAGC 2 cut(s) 178, 383
BccI CCATC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 261
BcoDI GTCTC 1 cut(s) 153
BfaI CTAG 3 cut(s) 15, 156, 521
BfmI CTRYAG 1 cut(s) 339
BfoI RGCGCY 1 cut(s) 113
BglII AGATCT 1 cut(s) 139
BisI GCNGC 2 cut(s) 192, 372
BlpI GCTNAGC 1 cut(s) 256
BlsI GCNGC 2 cut(s) 193, 373
BmiI GGNNCC 2 cut(s) 111, 661
BmsI GCATC 2 cut(s) 111, 178
BpiI GAAGAC 1 cut(s) 658
BplI GAGNNNNNCTC 2 cut(s) 232, 264
Bpu10I CCTNAGC 1 cut(s) 264
Bpu1102I GCTNAGC 1 cut(s) 256
BpuEI CTTGAG 1 cut(s) 267
BsaAI YACGTR 1 cut(s) 377
BsaBI GATNNNNATC 1 cut(s) 75
BsaHI GRCGYC 1 cut(s) 110
BsaJI CCNNGG 2 cut(s) 91, 413
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 414, 467
Bse1I ACTGG 1 cut(s) 152
Bse8I GATNNNNATC 1 cut(s) 75
BseDI CCNNGG 2 cut(s) 91, 413
BseGI GGATG 7 cut(s) 7, 193, 424, 457, 484, 532, 604
BseJI GATNNNNATC 1 cut(s) 75
BseLI CCNNNNNNNGG 3 cut(s) 17, 414, 467
BseMII CTCAG 2 cut(s) 185, 624
BseNI ACTGG 1 cut(s) 152
BseRI GAGGAG 5 cut(s) 239, 242, 530, 562, 634
BseSI GKGCMC 1 cut(s) 363
BseXI GCAGC 2 cut(s) 178, 383
Bsh1285I CGRYCG 1 cut(s) 37
BshNI GGYRCC 1 cut(s) 109
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 2 cut(s) 283, 406
BslFI GGGAC 1 cut(s) 68
BslI CCNNNNNNNGG 3 cut(s) 17, 414, 467
BsmAI GTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 68
Bsp1286I GDGCHC 3 cut(s) 283, 363, 406
Bsp143I GATC 3 cut(s) 40, 139, 204
Bsp1720I GCTNAGC 1 cut(s) 256
BspACI CCGC 2 cut(s) 21, 33
BspCNI CTCAG 2 cut(s) 184, 623
BspLI GGNNCC 2 cut(s) 111, 661
BspMAI CTGCAG 1 cut(s) 343
BspT107I GGYRCC 1 cut(s) 109
BsrI ACTGG 1 cut(s) 152
BssECI CCNNGG 2 cut(s) 91, 413
BssMI GATC 3 cut(s) 40, 139, 204
BssNAI GTATAC 1 cut(s) 153
BssNI GRCGYC 1 cut(s) 110
BssT1I CCWWGG 2 cut(s) 91, 413
Bst1107I GTATAC 1 cut(s) 153
Bst6I CTCTTC 5 cut(s) 195, 216, 507, 539, 641
BstACI GRCGYC 1 cut(s) 110
BstAPI GCANNNNNTGC 1 cut(s) 278
BstBAI YACGTR 1 cut(s) 377
BstC8I GCNNGC 4 cut(s) 234, 270, 274, 363
BstDEI CTNAG 4 cut(s) 171, 256, 264, 610
BstF5I GGATG 7 cut(s) 7, 193, 424, 457, 484, 532, 604
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 1 cut(s) 112
BstKTI GATC 3 cut(s) 43, 142, 207
BstMAI GTCTC 1 cut(s) 153
BstMBI GATC 3 cut(s) 40, 139, 204
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 5 cut(s) 176, 278, 301, 371, 592
BstSFI CTRYAG 1 cut(s) 339
BstSLI GKGCMC 1 cut(s) 363
BstV1I GCAGC 2 cut(s) 178, 383
BstV2I GAAGAC 1 cut(s) 658
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BstZ17I GTATAC 1 cut(s) 153
BtsCI GGATG 7 cut(s) 7, 193, 424, 457, 484, 532, 604
BtsIMutI CAGTG 1 cut(s) 145
Cac8I GCNNGC 4 cut(s) 234, 270, 274, 363
CfoI GCGC 1 cut(s) 112
CviAII CATG 5 cut(s) 305, 383, 578, 596, 656
CviJI RGCY 8 cut(s) 236, 248, 255, 260, 276, 295, 333, 520
CviKI_1 RGCY 8 cut(s) 236, 248, 255, 260, 276, 295, 333, 520
DdeI CTNAG 4 cut(s) 171, 256, 264, 610
DinI GGCGCC 1 cut(s) 111
DpnI GATC 3 cut(s) 42, 141, 206
DpnII GATC 3 cut(s) 40, 139, 204
Eam1104I CTCTTC 5 cut(s) 195, 216, 507, 539, 641
EarI CTCTTC 5 cut(s) 195, 216, 507, 539, 641
Eco130I CCWWGG 2 cut(s) 91, 413
Eco57I CTGAAG 1 cut(s) 387
Eco72I CACGTG 1 cut(s) 377
EcoT14I CCWWGG 2 cut(s) 91, 413
EgeI GGCGCC 1 cut(s) 111
EheI GGCGCC 1 cut(s) 111
ErhI CCWWGG 2 cut(s) 91, 413
FaeI CATG 5 cut(s) 308, 386, 581, 599, 659
FaiI YATR 7 cut(s) 153, 239, 306, 384, 579, 597, 657
FaqI GGGAC 1 cut(s) 68
FatI CATG 5 cut(s) 304, 382, 577, 595, 655
FblI GTMKAC 1 cut(s) 152
Fnu4HI GCNGC 2 cut(s) 192, 372
FokI GGATG 6 cut(s) 200, 431, 464, 491, 539, 591
Fsp4HI GCNGC 2 cut(s) 192, 372
FspBI CTAG 3 cut(s) 15, 156, 521
GlaI GCGC 1 cut(s) 111
GluI GCNGC 2 cut(s) 192, 372
HaeII RGCGCY 1 cut(s) 113
HhaI GCGC 1 cut(s) 112
Hin1I GRCGYC 1 cut(s) 110
Hin1II CATG 5 cut(s) 308, 386, 581, 599, 659
Hin6I GCGC 1 cut(s) 110
HinP1I GCGC 1 cut(s) 110
HinfI GANTC 2 cut(s) 422, 665
HphI GGTGA 2 cut(s) 365, 483
Hpy166II GTNNAC 1 cut(s) 153
Hpy188I TCNGA 5 cut(s) 174, 316, 613, 664, 670
Hpy188III TCNNGA 3 cut(s) 38, 80, 208
Hpy8I GTNNAC 1 cut(s) 153
HpyAV CCTTC 3 cut(s) 169, 350, 442
HpyCH4IV ACGT 2 cut(s) 348, 376
HpyCH4V TGCA 5 cut(s) 194, 272, 341, 382, 398
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 278, 301, 371, 592
HpyF3I CTNAG 4 cut(s) 171, 256, 264, 610
HpySE526I ACGT 2 cut(s) 348, 376
Hsp92I GRCGYC 1 cut(s) 110
Hsp92II CATG 5 cut(s) 308, 386, 581, 599, 659
HspAI GCGC 1 cut(s) 110
KasI GGCGCC 1 cut(s) 109
Kzo9I GATC 3 cut(s) 40, 139, 204
LmnI GCTCC 3 cut(s) 229, 265, 517
LpnPI CCDG 7 cut(s) 126, 133, 218, 421, 474, 554, 616
Lsp1109I GCAGC 2 cut(s) 178, 383
LweI GCATC 2 cut(s) 111, 178
MaeI CTAG 3 cut(s) 15, 156, 521
MaeII ACGT 2 cut(s) 348, 376
MaeIII GTNAC 1 cut(s) 95
MalI GATC 3 cut(s) 42, 141, 206
MboI GATC 3 cut(s) 40, 139, 204
MboII GAAGA 7 cut(s) 132, 212, 233, 524, 556, 658, 663
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 3 cut(s) 283, 363, 406
MluCI AATT 2 cut(s) 44, 487
Mly113I GGCGCC 1 cut(s) 110
MlyI GAGTC 2 cut(s) 431, 659
MmeI TCCRAC 2 cut(s) 456, 464
MseI TTAA 3 cut(s) 63, 216, 435
MwoI GCNNNNNNNGC 5 cut(s) 176, 278, 301, 371, 592
NarI GGCGCC 1 cut(s) 110
NdeII GATC 3 cut(s) 40, 139, 204
NlaIII CATG 5 cut(s) 308, 386, 581, 599, 659
NlaIV GGNNCC 2 cut(s) 111, 661
NmuCI GTSAC 1 cut(s) 95
PcsI WCGNNNNNNNCGW 1 cut(s) 34
PkrI GCNGC 2 cut(s) 193, 373
PleI GAGTC 2 cut(s) 430, 659
PluTI GGCGCC 1 cut(s) 113
PmaCI CACGTG 1 cut(s) 377
PmlI CACGTG 1 cut(s) 377
PpsI GAGTC 2 cut(s) 430, 659
Ppu21I YACGTR 1 cut(s) 377
PspCI CACGTG 1 cut(s) 377
PspN4I GGNNCC 2 cut(s) 111, 661
PstI CTGCAG 1 cut(s) 343
PsuI RGATCY 1 cut(s) 139
SaqAI TTAA 3 cut(s) 63, 216, 435
SatI GCNGC 2 cut(s) 192, 372
Sau3AI GATC 3 cut(s) 40, 139, 204
SchI GAGTC 2 cut(s) 431, 659
SduI GDGCHC 3 cut(s) 283, 363, 406
SfaNI GCATC 2 cut(s) 111, 178
SfcI CTRYAG 1 cut(s) 339
SfoI GGCGCC 1 cut(s) 111
SmlI CTYRAG 1 cut(s) 282
SmoI CTYRAG 1 cut(s) 282
Sse9I AATT 2 cut(s) 44, 487
SsiI CCGC 2 cut(s) 21, 33
SspDI GGCGCC 1 cut(s) 109
SspMI CTAG 3 cut(s) 15, 156, 521
StyI CCWWGG 2 cut(s) 91, 413
TaiI ACGT 2 cut(s) 351, 379
TaqI TCGA 3 cut(s) 37, 79, 538
TasI AATT 2 cut(s) 44, 487
Tru1I TTAA 3 cut(s) 63, 216, 435
Tru9I TTAA 3 cut(s) 63, 216, 435
TscAI CASTG 1 cut(s) 152
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 2 cut(s) 191, 371
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 1 cut(s) 543
TspRI CASTG 1 cut(s) 152
XmiI GTMKAC 1 cut(s) 152
XspI CTAG 3 cut(s) 15, 156, 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.