Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0012793

Physical Location & Seq

Genomic Coordinates Reverse (-)

6537717 .. 6540640

Gene Structure 2924 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1048300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGGATGCCTTCACGTCTTTCTTCGATTCCCAAACGTCTTCGCGAAACCGCTGGGCTTCCGAGTCTCTCAAGAATTTCCGTCAGATCTCTCCCGTCGTTCAGAATCATCTCAAACTGGTCTACCTCACTTTATGCTGCACCCTGATTGCATCAGCTGCAGGAGCCTACCTGCATATCCTGTGGAATATCGGAGGCATGATCACCCTTCTTTCTTGCATTGGATGCATGGTGTGGTTACTCTGCACACCAACCTATCAAGAGAAGAAGAGGGTTTCTCTACTGATGGCCGCTGGTCTCTTTGAGGGGGCTACTCTTGGGCCTTTAATTGAACTGGCCATTGAGATTAACCCGAGTGTCTTGATCAGTGCATTTGGAGGAACTGCTCTGGCCTTTGGCTGTTTCTCAGCAGCAGCCATGTTGGCAAGGCGCCGGGAATACCTTTACCTGGGGGGTTTGCTTTCTTCTGGCCTTTCTATGCTAATCTGGTTACAGTTTGCTTCTTCTGTCTTTGGGGGTTCTGCAGCTCTTTTCAAATTTGAGCTGTATTTCGGGCTTTTGATTTTTGTGGGCTACATGGTAGTTGACACCCAGGAAATGATTGAGAAGGCGCACCATGGTGACCTGGACTATGTGAAGCATGCCCTGACCCTTTTCACTGACTTTGTTGCTGTGTTCATCCGTATACTGGTTATCATGTTGAAGAACTCGGCCGAGAAGAATGAGAAGAAGAAGAAAAGAAAGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006983 GO:0006984 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009607 GO:0009628 GO:0009987 GO:0010035 GO:0010941 GO:0012505 GO:0019752 GO:0023052 GO:0031967 GO:0031975 GO:0032787 GO:0033554 GO:0034976 GO:0042221 GO:0043067 GO:0043069 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060548 GO:0065007 GO:0071216 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

249

Amino Acids

27.51

Weight (kDa)

8.86

Isoelectric Point (pI)

48.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	34 - 232	8.2e-41	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012793)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47120
fragaria_vesca	FvH4_5g20220
malus_domestica	MD04G1051800.v1.1 MD06G1048300.v1.1
prunus_persica	Prupe.5G058500_v2.0.a1
pyrus_communis	pycom04g04550 pycom06g04130
rosa_chinensis	RchiOBHm_Chr7g0205291
rosa_laevigata	RLG00000003390
rosa_multiflora	Rmu_co8306939.1_g000001 Rmu_sc0001072.1_g000018 Rmu_sc0007852.1_g000001
rosa_roxburghii	Rroxscaffold_3G00252500
rosa_rugosa	Rorug07G0089500.1
rosa_samantha	Rh7BG216000 Rh7CG232900 Rh7DG226900
rosa_wichuraiana	Rw7G019020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	177
AccB1I	GGYRCC	1 cut(s)	426
AccI	GTMKAC	2 cut(s)	120, 682
AccII	CGCG	1 cut(s)	43
AciI	CCGC	2 cut(s)	49, 288
AcoI	YGGCCR	3 cut(s)	285, 333, 708
AcsI	RAATTY	2 cut(s)	73, 533
AcyI	GRCGYC	1 cut(s)	427
AfiI	CCNNNNNNNGG	2 cut(s)	445, 685
AgsI	TTSAA	3 cut(s)	329, 532, 700
AjiI	CACGTC	1 cut(s)	15
AjnI	CCWGG	3 cut(s)	444, 588, 621
AleI	CACNNNNGTG	1 cut(s)	615
AluBI	AGCT	3 cut(s)	155, 524, 541
AluI	AGCT	3 cut(s)	155, 524, 541
Alw26I	GTCTC	2 cut(s)	69, 299
Ama87I	CYCGRG	1 cut(s)	349
AoxI	GGCC	6 cut(s)	285, 317, 333, 387, 466, 708
ApeKI	GCWGC	5 cut(s)	135, 155, 407, 410, 521
ApoI	RAATTY	2 cut(s)	73, 533
AspLEI	GCGC	2 cut(s)	429, 610
AspS9I	GGNCC	1 cut(s)	317
AsuC2I	CCSGG	1 cut(s)	431
AsuHPI	GGTGA	2 cut(s)	193, 629
AvaI	CYCGRG	1 cut(s)	349
BalI	TGGCCA	1 cut(s)	335
BanI	GGYRCC	1 cut(s)	426
BbsI	GAAGAC	1 cut(s)	30
BbvI	GCAGC	5 cut(s)	122, 142, 419, 422, 533
BccI	CCATC	1 cut(s)	277
BciT130I	CCWGG	3 cut(s)	446, 590, 623
BclI	TGATCA	2 cut(s)	198, 360
BcnI	CCSGG	1 cut(s)	431
BcoDI	GTCTC	2 cut(s)	69, 299
BfmI	CTRYAG	2 cut(s)	156, 519
BfoI	RGCGCY	1 cut(s)	430
BfuAI	ACCTGC	1 cut(s)	177
BglI	GCCNNNNNGGC	1 cut(s)	419
BglII	AGATCT	1 cut(s)	84
BisI	GCNGC	6 cut(s)	136, 156, 288, 408, 411, 522
BlsI	GCNGC	6 cut(s)	137, 157, 289, 409, 412, 523
Bme1390I	CCNGG	4 cut(s)	431, 446, 590, 623
BmeT110I	CYCGRG	1 cut(s)	349
BmgBI	CACGTC	1 cut(s)	15
BmgT120I	GGNCC	1 cut(s)	317
BmiI	GGNNCC	2 cut(s)	163, 428
BmrFI	CCNGG	4 cut(s)	431, 446, 590, 623
BmsI	GCATC	2 cut(s)	158, 212
BpiI	GAAGAC	1 cut(s)	30
BplI	GAGNNNNNCTC	2 cut(s)	259, 291
BpuEI	CTTGAG	1 cut(s)	53
BpuMI	CCSGG	1 cut(s)	431
BsaHI	GRCGYC	1 cut(s)	427
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	3 cut(s)	445, 588, 613
Bsc4I	CCNNNNNNNGG	2 cut(s)	445, 685
Bse1I	ACTGG	3 cut(s)	120, 336, 690
BseBI	CCWGG	3 cut(s)	446, 590, 623
BseDI	CCNNGG	3 cut(s)	445, 588, 613
BseGI	GGATG	3 cut(s)	10, 227, 675
BseLI	CCNNNNNNNGG	2 cut(s)	445, 685
BseMII	CTCAG	1 cut(s)	417
BseNI	ACTGG	3 cut(s)	120, 336, 690
BseX3I	CGGCCG	1 cut(s)	708
BseXI	GCAGC	5 cut(s)	122, 142, 419, 422, 533
BseYI	CCCAGC	1 cut(s)	51
BsgI	GTGCAG	2 cut(s)	121, 226
Bsh1236I	CGCG	1 cut(s)	43
Bsh1285I	CGRYCG	1 cut(s)	711
BshFI	GGCC	6 cut(s)	287, 319, 335, 389, 468, 710
BshNI	GGYRCC	1 cut(s)	426
BsiEI	CGRYCG	1 cut(s)	711
BsiHKCI	CYCGRG	1 cut(s)	349
BsiSI	CCGG	1 cut(s)	430
BslI	CCNNNNNNNGG	2 cut(s)	445, 685
BsmAI	GTCTC	2 cut(s)	69, 299
BsnI	GGCC	6 cut(s)	287, 319, 335, 389, 468, 710
Bso31I	GGTCTC	1 cut(s)	299
BsoBI	CYCGRG	1 cut(s)	349
Bsp143I	GATC	3 cut(s)	84, 198, 360
Bsp19I	CCATGG	1 cut(s)	613
Bsp68I	TCGCGA	1 cut(s)	43
BspACI	CCGC	2 cut(s)	49, 288
BspANI	GGCC	6 cut(s)	287, 319, 335, 389, 468, 710
BspCNI	CTCAG	1 cut(s)	416
BspFNI	CGCG	1 cut(s)	43
BspLI	GGNNCC	2 cut(s)	163, 428
BspMAI	CTGCAG	2 cut(s)	160, 523
BspMI	ACCTGC	1 cut(s)	177
BspT107I	GGYRCC	1 cut(s)	426
BspTNI	GGTCTC	1 cut(s)	299
BsrI	ACTGG	3 cut(s)	120, 336, 690
BssECI	CCNNGG	3 cut(s)	445, 588, 613
BssMI	GATC	3 cut(s)	84, 198, 360
BssNAI	GTATAC	1 cut(s)	683
BssNI	GRCGYC	1 cut(s)	427
BssT1I	CCWWGG	1 cut(s)	613
Bst1107I	GTATAC	1 cut(s)	683
Bst2UI	CCWGG	3 cut(s)	446, 590, 623
Bst4CI	ACNGT	1 cut(s)	492
Bst6I	CTCTTC	1 cut(s)	260
BstACI	GRCGYC	1 cut(s)	427
BstAPI	GCANNNNNTGC	2 cut(s)	155, 222
BstC8I	GCNNGC	1 cut(s)	639
BstDEI	CTNAG	1 cut(s)	403
BstDSI	CCRYGG	1 cut(s)	613
BstEII	GGTNACC	1 cut(s)	617
BstF5I	GGATG	3 cut(s)	10, 227, 675
BstFNI	CGCG	1 cut(s)	43
BstH2I	RGCGCY	1 cut(s)	430
BstHHI	GCGC	2 cut(s)	429, 610
BstKTI	GATC	3 cut(s)	87, 201, 363
BstMAI	GTCTC	2 cut(s)	69, 299
BstMBI	GATC	3 cut(s)	84, 198, 360
BstMCI	CGRYCG	1 cut(s)	711
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 161, 222, 419
BstNI	CCWGG	3 cut(s)	446, 590, 623
BstNSI	RCATGY	1 cut(s)	641
BstPI	GGTNACC	1 cut(s)	617
BstSCI	CCNGG	4 cut(s)	429, 444, 588, 621
BstSFI	CTRYAG	2 cut(s)	156, 519
BstUI	CGCG	1 cut(s)	43
BstV1I	GCAGC	5 cut(s)	122, 142, 419, 422, 533
BstV2I	GAAGAC	1 cut(s)	30
BstX2I	RGATCY	1 cut(s)	84
BstYI	RGATCY	1 cut(s)	84
BstZ17I	GTATAC	1 cut(s)	683
BstZI	CGGCCG	1 cut(s)	708
BsuRI	GGCC	6 cut(s)	287, 319, 335, 389, 468, 710
BtgI	CCRYGG	1 cut(s)	613
BtrI	CACGTC	1 cut(s)	15
BtsCI	GGATG	3 cut(s)	10, 227, 675
BtsIMutI	CAGTG	2 cut(s)	370, 654
BtuMI	TCGCGA	1 cut(s)	43
BveI	ACCTGC	1 cut(s)	177
Cac8I	GCNNGC	1 cut(s)	639
CfoI	GCGC	2 cut(s)	429, 610
Cfr13I	GGNCC	1 cut(s)	317
CviAII	CATG	7 cut(s)	196, 226, 415, 574, 614, 638, 694
DdeI	CTNAG	1 cut(s)	403
DinI	GGCGCC	1 cut(s)	428
DpnI	GATC	3 cut(s)	86, 200, 362
DpnII	GATC	3 cut(s)	84, 198, 360
EaeI	YGGCCR	3 cut(s)	285, 333, 708
EagI	CGGCCG	1 cut(s)	708
Eam1104I	CTCTTC	1 cut(s)	260
EarI	CTCTTC	1 cut(s)	260
EclXI	CGGCCG	1 cut(s)	708
Eco130I	CCWWGG	1 cut(s)	613
Eco31I	GGTCTC	1 cut(s)	299
Eco52I	CGGCCG	1 cut(s)	708
Eco88I	CYCGRG	1 cut(s)	349
Eco91I	GGTNACC	1 cut(s)	617
EcoO65I	GGTNACC	1 cut(s)	617
EcoRII	CCWGG	3 cut(s)	444, 588, 621
EcoT14I	CCWWGG	1 cut(s)	613
EcoT22I	ATGCAT	1 cut(s)	227
EgeI	GGCGCC	1 cut(s)	428
EheI	GGCGCC	1 cut(s)	428
ErhI	CCWWGG	1 cut(s)	613
FaeI	CATG	7 cut(s)	199, 229, 418, 577, 617, 641, 697
FatI	CATG	7 cut(s)	195, 225, 414, 573, 613, 637, 693
FbaI	TGATCA	2 cut(s)	198, 360
FblI	GTMKAC	2 cut(s)	120, 682
Fnu4HI	GCNGC	6 cut(s)	136, 156, 288, 408, 411, 522
FokI	GGATG	3 cut(s)	17, 234, 662
Fsp4HI	GCNGC	6 cut(s)	136, 156, 288, 408, 411, 522
GlaI	GCGC	2 cut(s)	428, 609
GluI	GCNGC	6 cut(s)	136, 156, 288, 408, 411, 522
GsaI	CCCAGC	1 cut(s)	55
HaeII	RGCGCY	1 cut(s)	430
HaeIII	GGCC	6 cut(s)	287, 319, 335, 389, 468, 710
HapII	CCGG	1 cut(s)	430
HhaI	GCGC	2 cut(s)	429, 610
Hin1I	GRCGYC	1 cut(s)	427
Hin1II	CATG	7 cut(s)	199, 229, 418, 577, 617, 641, 697
Hin6I	GCGC	2 cut(s)	427, 608
HinP1I	GCGC	2 cut(s)	427, 608
HincII	GTYRAC	1 cut(s)	583
HindII	GTYRAC	1 cut(s)	583
HinfI	GANTC	3 cut(s)	26, 62, 103
HpaII	CCGG	1 cut(s)	430
HphI	GGTGA	2 cut(s)	193, 629
Hpy166II	GTNNAC	3 cut(s)	121, 583, 683
Hpy188I	TCNGA	4 cut(s)	61, 84, 102, 191
Hpy188III	TCNNGA	4 cut(s)	42, 70, 257, 358
Hpy8I	GTNNAC	3 cut(s)	121, 583, 683
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	3 cut(s)	19, 215, 598
HpyCH4III	ACNGT	1 cut(s)	492
HpyCH4IV	ACGT	2 cut(s)	14, 35
HpyCH4V	TGCA	9 cut(s)	138, 149, 158, 172, 216, 225, 243, 368, 521
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 161, 222, 419
HpyF3I	CTNAG	1 cut(s)	403
HpySE526I	ACGT	2 cut(s)	14, 35
Hsp92I	GRCGYC	1 cut(s)	427
Hsp92II	CATG	7 cut(s)	199, 229, 418, 577, 617, 641, 697
HspAI	GCGC	2 cut(s)	427, 608
KasI	GGCGCC	1 cut(s)	426
Ksp22I	TGATCA	2 cut(s)	198, 360
Kzo9I	GATC	3 cut(s)	84, 198, 360
LmnI	GCTCC	1 cut(s)	161
Lsp1109I	GCAGC	5 cut(s)	122, 142, 419, 422, 533
LweI	GCATC	2 cut(s)	158, 212
MaeII	ACGT	2 cut(s)	14, 35
MaeIII	GTNAC	3 cut(s)	234, 486, 617
MalI	GATC	3 cut(s)	86, 200, 362
MboI	GATC	3 cut(s)	84, 198, 360
MflI	RGATCY	1 cut(s)	84
MlsI	TGGCCA	1 cut(s)	335
MluCI	AATT	3 cut(s)	73, 324, 533
MluNI	TGGCCA	1 cut(s)	335
Mly113I	GGCGCC	1 cut(s)	427
MlyI	GAGTC	1 cut(s)	71
MnlI	CCTC	5 cut(s)	134, 185, 261, 295, 368
Mox20I	TGGCCA	1 cut(s)	335
Mph1103I	ATGCAT	1 cut(s)	227
MscI	TGGCCA	1 cut(s)	335
MseI	TTAA	2 cut(s)	323, 345
MslI	CAYNNNNRTG	1 cut(s)	615
Msp20I	TGGCCA	1 cut(s)	335
MspA1I	CMGCKG	3 cut(s)	51, 155, 290
MspI	CCGG	1 cut(s)	430
MspR9I	CCNGG	4 cut(s)	431, 446, 590, 623
MvaI	CCWGG	3 cut(s)	446, 590, 623
MvnI	CGCG	1 cut(s)	43
MwoI	GCNNNNNNNGC	4 cut(s)	155, 161, 222, 419
NarI	GGCGCC	1 cut(s)	427
NciI	CCSGG	1 cut(s)	431
NcoI	CCATGG	1 cut(s)	613
NdeII	GATC	3 cut(s)	84, 198, 360
NlaIII	CATG	7 cut(s)	199, 229, 418, 577, 617, 641, 697
NlaIV	GGNNCC	2 cut(s)	163, 428
NmeAIII	GCCGAG	2 cut(s)	686, 736
NmuCI	GTSAC	1 cut(s)	617
NruI	TCGCGA	1 cut(s)	43
NsiI	ATGCAT	1 cut(s)	227
NspI	RCATGY	1 cut(s)	641
OliI	CACNNNNGTG	1 cut(s)	615
PaeI	GCATGC	1 cut(s)	641
PfeI	GAWTC	2 cut(s)	26, 103
PkrI	GCNGC	6 cut(s)	137, 157, 289, 409, 412, 523
PleI	GAGTC	1 cut(s)	70
PluTI	GGCGCC	1 cut(s)	430
PpsI	GAGTC	1 cut(s)	70
Psp6I	CCWGG	3 cut(s)	444, 588, 621
PspEI	GGTNACC	1 cut(s)	617
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	3 cut(s)	444, 588, 621
PspN4I	GGNNCC	2 cut(s)	163, 428
PspPI	GGNCC	1 cut(s)	317
PstI	CTGCAG	2 cut(s)	160, 523
PsuI	RGATCY	1 cut(s)	84
PvuII	CAGCTG	1 cut(s)	155
RruI	TCGCGA	1 cut(s)	43
RseI	CAYNNNNRTG	1 cut(s)	615
SaqAI	TTAA	2 cut(s)	323, 345
SatI	GCNGC	6 cut(s)	136, 156, 288, 408, 411, 522
Sau3AI	GATC	3 cut(s)	84, 198, 360
Sau96I	GGNCC	1 cut(s)	317
SchI	GAGTC	1 cut(s)	71
ScrFI	CCNGG	4 cut(s)	431, 446, 590, 623
SfaNI	GCATC	2 cut(s)	158, 212
SfcI	CTRYAG	2 cut(s)	156, 519
SfoI	GGCGCC	1 cut(s)	428
SmiMI	CAYNNNNRTG	1 cut(s)	615
SmlI	CTYRAG	1 cut(s)	68
SmoI	CTYRAG	1 cut(s)	68
SphI	GCATGC	1 cut(s)	641
Sse9I	AATT	3 cut(s)	73, 324, 533
SsiI	CCGC	2 cut(s)	49, 288
SspDI	GGCGCC	1 cut(s)	426
StyD4I	CCNGG	4 cut(s)	429, 444, 588, 621
StyI	CCWWGG	1 cut(s)	613
TaaI	ACNGT	1 cut(s)	492
TaiI	ACGT	2 cut(s)	17, 38
TaqI	TCGA	1 cut(s)	24
TasI	AATT	3 cut(s)	73, 324, 533
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	2 cut(s)	26, 103
Tru1I	TTAA	2 cut(s)	323, 345
Tru9I	TTAA	2 cut(s)	323, 345
TscAI	CASTG	2 cut(s)	370, 661
TseFI	GTSAC	1 cut(s)	617
TseI	GCWGC	5 cut(s)	135, 155, 407, 410, 521
Tsp45I	GTSAC	1 cut(s)	617
TspDTI	ATGAA	1 cut(s)	664
TspGWI	ACGGA	2 cut(s)	68, 668
TspRI	CASTG	2 cut(s)	370, 661
XapI	RAATTY	2 cut(s)	73, 533
XceI	RCATGY	1 cut(s)	641
XmiI	GTMKAC	2 cut(s)	120, 682
Zsp2I	ATGCAT	1 cut(s)	227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.