MD06G1108700.v1.1
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0005955
Physical Location & Seq
Forward (+)
24815657 .. 24821211
5555 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1108700.v1.1.491

Sequence Viewer

Length: 1833 bp
ATGGAGAACCTGATCTCGTTGGTGAACAAAATCCAGAGAGCTTGTACTGCTCTAGGTGACTATGGCGAAGGTAGCGCATTACCGACTCTTTGGGACTCTCTTCCCGCCATCGCCGTCGTCGGTGGCCAGAGTTCCGGGAAGTCTTCTGTTTTGGAGAGCATTGTTGGGAAGGATTTCTTACCGCGTGGTTCTGGAATTGTTACTCGGCGTCCACTTGTCTTGCAACTTCATAAGATTGACGAAGGAAGCAGAGAATATGCGGAGTTTCTCCATCTTCCAAGGAAGAGGTTCACCGATTTTGCTGCTGTGAGAAAGGAGATTTCAGACGAGACAGATCGAGAAACCGGCCGCAGTAAACAAATCTCTAGCGTTCCAATTCATCTTAGCATATATTCTCCTAATGTTGTCAACTTGACACTTATTGACCTTCCCGGGCTTACAAAAGTCGCTGTTGAGGGTCAATCGGAAAATATTGTACAAGATATTGAAAACATGGTTCGCTCCTACATTGAGAAGCCCAACTGTATAATTCTAGCTATTTCACCTGCCAATCAAGATCTTGCTACATCTGATGCAATTAGGATCTCTCGCGAAGTGGATCCAACAGGGGAGAGGACACTTGGAGTCTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCAGTTGAAATATTGGAAGGAAAGTCATATCGGCTAAAGTTTCCTTGGGTTGGGGTTGTGAATCGCTCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCCAGGCGTAGAGAACGTGAGTATTTTTCTACCACCCCAGAATACAAGCACCTTGCTCACAGAATGGGTTCTGAGCATCTAGCAAAAATGCTTTCTAAGCATTTGGAAACTGTAATTAAGTCAAAAATTCCGGGCATCCAGTCCCTTATTAGCAAGACTGTTGCTGAACTTGAAACTGAACTGAGTCGTCTTGGAAAGCCCATTTCTGCTGATGCTGGAGGTAAACTGTATACCATCATGGAGATTTGTCGCTTTTTTGATGGGATATATAAAGAACATCTTGATGGCGTGCGTCCAGGTGGTGATAAGATTTACAATGTTTTTGATAATCAGCTTCCTGCTGCTCTGAAAAGATTGCAATTTGACAAGCAGCTTTCAATGGAAAATATACGAAAGCTCATTACTGAAGCTGATGGATATCAACCTCATCTTATAGCTCCTGAACAAGGTTATCGTCGTCTCATTGAATCCTCTGTAGTTAGCATAAGAGGTCCTGCTGAGGCAGCTGTTGATGCGGTTCACATCATTTTGAAGGATCTGGTTCACAAGGCTATCAGTGAGACTCCAGAGTTAAAGCAGTATCCTGCTCTCAGAGTAGAGGTTACAAATGCAGCTACTGAGTCGCTCGAGAGAATGAGAGAACAAAGCAAGAAGGCAACACTACAGCTAGTTGATATGGAATGCAGTTACCTGACGGTTGATTTCTTCCGTAAACTTCCCCAAGACATTGACAAGGGCGGAAACCCATCGCATTCACTTTTTGATAGATACAATGATTCATATCTCAGGCGGATTGGGTCTAATGTTCTGGCGTATGTCAATATGGTATGCGCAAGCTTGCGTAACTCCATCCCCAAGTCTGTGGTCTATTGCCAAGTTCGAGAGGCGAAACGAAGCTTACTTGACCATTTCTTCACTGACTTGGGAAAACTGGAGACAAAGCGGCTGTCGTCGTTACTGAATGAGGATCCGGCAGTAATGGAGAGGCGTACTTCCCTTGCAAAGAGGCTGGAGCTATACAGGAGTGCTCAAGCAGAAATGGATTCAGTTGCTTGGGCGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000266 GO:0000278 GO:0000280 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0000911 GO:0000919 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005856 GO:0005874 GO:0005886 GO:0005911 GO:0006810 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007049 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009507 GO:0009524 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009888 GO:0009920 GO:0009987 GO:0010015 GO:0010026 GO:0010051 GO:0010053 GO:0010054 GO:0010090 GO:0010091 GO:0010154 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0021700 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0030054 GO:0030154 GO:0030276 GO:0031090 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032878 GO:0032989 GO:0034357 GO:0042546 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043424 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051301 GO:0055035 GO:0055044 GO:0061458 GO:0061640 GO:0065007 GO:0071554 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090626 GO:0090627 GO:0098588 GO:0098657 GO:0098805 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0140014 GO:1902410 GO:1903047 GO:1905392 GO:2000114
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100
Pfam Domains
Protein Families
Dynamin_M Dynamin_N GED

Protein Analysis

611

Amino Acids

68.34

Weight (kDa)

8.29

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 37 - 213 1.8e-55 Dynamin family
Dynamin_M PF01031 221 - 489 6.6e-67 Dynamin central region
GED PF02212 514 - 606 2.2e-21 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 553
Acc16I TGCGCA 1 cut(s) 1600
Acc36I ACCTGC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 998
AccII CGCG 2 cut(s) 184, 591
AciI CCGC 8 cut(s) 105, 182, 260, 349, 1283, 1506, 1558, 1711
AclWI GGATC 6 cut(s) 590, 593, 606, 1311, 1730, 1743
AcoI YGGCCR 2 cut(s) 124, 346
AcsI RAATTY 1 cut(s) 894
AcuI CTGAAG 1 cut(s) 1194
AcyI GRCGYC 1 cut(s) 208
AfaI GTAC 4 cut(s) 46, 477, 658, 1759
AfiI CCNNNNNNNGG 2 cut(s) 713, 1214
AgsI TTSAA 6 cut(s) 488, 671, 941, 1146, 1235, 1300
AjnI CCWGG 2 cut(s) 770, 1063
Alw21I GWGCWC 1 cut(s) 1798
Alw26I GTCTC 4 cut(s) 323, 1232, 1322, 1697
AlwI GGATC 6 cut(s) 590, 593, 606, 1311, 1730, 1743
AlwNI CAGNNNCTG 1 cut(s) 1385
Ama87I CYCGRG 2 cut(s) 431, 1394
AoxI GGCC 2 cut(s) 124, 346
ApeKI GCWGC 6 cut(s) 302, 767, 1109, 1138, 1271, 1379
ApoI RAATTY 1 cut(s) 894
ArsI GACNNNNNNTTYG 2 cut(s) 1700, 1732
Asp700I GAANNNNTTC 3 cut(s) 173, 287, 835
AspLEI GCGC 2 cut(s) 77, 1601
AspS9I GGNCC 1 cut(s) 1259
AsuC2I CCSGG 4 cut(s) 136, 432, 433, 900
AsuHPI GGTGA 5 cut(s) 34, 68, 283, 534, 1082
AvaI CYCGRG 2 cut(s) 431, 1394
AvaII GGWCC 1 cut(s) 1259
BalI TGGCCA 1 cut(s) 126
BamHI GGATCC 2 cut(s) 598, 1735
BbsI GAAGAC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 1798
BbvCI CCTCAGC 1 cut(s) 1266
BbvI GCAGC 6 cut(s) 289, 754, 1096, 1150, 1283, 1391
BccI CCATC 8 cut(s) 116, 279, 1010, 1022, 1046, 1175, 1522, 1625
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 2 cut(s) 772, 1065
BciVI GTATCC 1 cut(s) 1359
BcnI CCSGG 4 cut(s) 136, 432, 433, 900
BcoDI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BfaI CTAG 5 cut(s) 53, 366, 533, 848, 1436
BfmI CTRYAG 2 cut(s) 1242, 1430
BfuAI ACCTGC 1 cut(s) 553
BfuI GTATCC 1 cut(s) 1359
BglII AGATCT 1 cut(s) 556
BisI GCNGC 8 cut(s) 303, 349, 768, 1110, 1139, 1272, 1380, 1712
BlsI GCNGC 8 cut(s) 304, 350, 769, 1111, 1140, 1273, 1381, 1713
Bme1390I CCNGG 6 cut(s) 136, 432, 433, 772, 900, 1065
Bme18I GGWCC 1 cut(s) 1259
BmeT110I CYCGRG 2 cut(s) 431, 1394
BmgT120I GGNCC 1 cut(s) 1259
BmiI GGNNCC 2 cut(s) 600, 1737
BmrFI CCNGG 6 cut(s) 136, 432, 433, 772, 900, 1065
BmsI GCATC 6 cut(s) 562, 652, 853, 912, 970, 1270
BpiI GAAGAC 1 cut(s) 135
BpmI CTGGAG 4 cut(s) 1005, 1317, 1721, 1799
Bpu10I CCTNAGC 1 cut(s) 1266
BpuEI CTTGAG 1 cut(s) 1782
BpuMI CCSGG 4 cut(s) 136, 432, 433, 900
BsaBI GATNNNNATC 2 cut(s) 1185, 1548
BsaHI GRCGYC 1 cut(s) 208
BsaJI CCNNGG 3 cut(s) 278, 431, 707
Bsc4I CCNNNNNNNGG 2 cut(s) 713, 1214
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 2 cut(s) 907, 1704
Bse8I GATNNNNATC 2 cut(s) 1185, 1548
BseBI CCWGG 2 cut(s) 772, 1065
BseDI CCNNGG 3 cut(s) 278, 431, 707
BseGI GGATG 2 cut(s) 903, 1617
BseJI GATNNNNATC 2 cut(s) 1185, 1548
BseLI CCNNNNNNNGG 2 cut(s) 713, 1214
BseMII CTCAG 6 cut(s) 831, 941, 1257, 1372, 1377, 1567
BseNI ACTGG 2 cut(s) 907, 1704
BseX3I CGGCCG 1 cut(s) 346
BseXI GCAGC 6 cut(s) 289, 754, 1096, 1150, 1283, 1391
Bsh1236I CGCG 2 cut(s) 184, 591
Bsh1285I CGRYCG 1 cut(s) 349
BshFI GGCC 2 cut(s) 126, 348
BsiEI CGRYCG 1 cut(s) 349
BsiHKAI GWGCWC 1 cut(s) 1798
BsiHKCI CYCGRG 2 cut(s) 431, 1394
BsiSI CCGG 5 cut(s) 135, 345, 432, 899, 1739
BslFI GGGAC 2 cut(s) 107, 895
BslI CCNNNNNNNGG 2 cut(s) 713, 1214
BsmAI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BsmBI CGTCTC 1 cut(s) 1232
BsmFI GGGAC 2 cut(s) 107, 895
BsmI GAATGC 2 cut(s) 1454, 1519
BsnI GGCC 2 cut(s) 126, 348
BsoBI CYCGRG 2 cut(s) 431, 1394
Bsp1286I GDGCHC 1 cut(s) 1798
Bsp1407I TGTACA 1 cut(s) 475
Bsp143I GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
Bsp68I TCGCGA 1 cut(s) 591
BspACI CCGC 8 cut(s) 105, 182, 260, 349, 1283, 1506, 1558, 1711
BspANI GGCC 2 cut(s) 126, 348
BspCNI CTCAG 6 cut(s) 832, 942, 1258, 1371, 1378, 1566
BspFNI CGCG 2 cut(s) 184, 591
BspLI GGNNCC 2 cut(s) 600, 1737
BspMI ACCTGC 1 cut(s) 553
BspPI GGATC 6 cut(s) 590, 593, 606, 1311, 1730, 1743
BsrFI RCCGGY 1 cut(s) 344
BsrGI TGTACA 1 cut(s) 475
BsrI ACTGG 2 cut(s) 907, 1704
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 3 cut(s) 278, 431, 707
BssMI GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
BssNAI GTATAC 1 cut(s) 999
BssNI GRCGYC 1 cut(s) 208
BssT1I CCWWGG 2 cut(s) 278, 707
Bst1107I GTATAC 1 cut(s) 999
Bst2UI CCWGG 2 cut(s) 772, 1065
Bst4CI ACNGT 5 cut(s) 524, 880, 928, 996, 1465
Bst6I CTCTTC 2 cut(s) 105, 278
BstACI GRCGYC 1 cut(s) 208
BstAUI TGTACA 1 cut(s) 475
BstC8I GCNNGC 3 cut(s) 1058, 1603, 1607
BstDEI CTNAG 8 cut(s) 383, 840, 864, 950, 1266, 1358, 1386, 1553
BstENI CCTNNNNNAGG 1 cut(s) 1212
BstF5I GGATG 2 cut(s) 903, 1617
BstFNI CGCG 2 cut(s) 184, 591
BstHHI GCGC 2 cut(s) 77, 1601
BstKTI GATC 8 cut(s) 15, 337, 559, 585, 601, 643, 1306, 1738
BstMAI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BstMBI GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
BstMCI CGRYCG 1 cut(s) 349
BstMWI GCNNNNNNNGC 5 cut(s) 47, 72, 865, 1271, 1280
BstNI CCWGG 2 cut(s) 772, 1065
BstSCI CCNGG 6 cut(s) 134, 430, 431, 770, 898, 1063
BstSFI CTRYAG 2 cut(s) 1242, 1430
BstUI CGCG 2 cut(s) 184, 591
BstV1I GCAGC 6 cut(s) 289, 754, 1096, 1150, 1283, 1391
BstV2I GAAGAC 1 cut(s) 135
BstX2I RGATCY 5 cut(s) 556, 582, 598, 1303, 1735
BstXI CCANNNNNNTGG 1 cut(s) 1630
BstYI RGATCY 5 cut(s) 556, 582, 598, 1303, 1735
BstZ17I GTATAC 1 cut(s) 999
BstZI CGGCCG 1 cut(s) 346
BsuI GTATCC 1 cut(s) 1359
BsuRI GGCC 2 cut(s) 126, 348
BtgZI GCGATG 2 cut(s) 94, 1500
BtsCI GGATG 2 cut(s) 903, 1617
BtsIMutI CAGTG 2 cut(s) 1330, 1683
BtuMI TCGCGA 1 cut(s) 591
BveI ACCTGC 1 cut(s) 553
Cac8I GCNNGC 3 cut(s) 1058, 1603, 1607
CaiI CAGNNNCTG 1 cut(s) 1385
CfoI GCGC 2 cut(s) 77, 1601
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 1 cut(s) 1259
Cfr9I CCCGGG 1 cut(s) 431
CseI GACGC 2 cut(s) 197, 1049
Csp6I GTAC 4 cut(s) 45, 476, 657, 1758
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 3 cut(s) 493, 760, 1006
CviQI GTAC 4 cut(s) 45, 476, 657, 1758
DdeI CTNAG 8 cut(s) 383, 840, 864, 950, 1266, 1358, 1386, 1553
DpnI GATC 8 cut(s) 14, 336, 558, 584, 600, 642, 1305, 1737
DpnII GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
EaeI YGGCCR 2 cut(s) 124, 346
EagI CGGCCG 1 cut(s) 346
Eam1104I CTCTTC 2 cut(s) 105, 278
EarI CTCTTC 2 cut(s) 105, 278
EciI GGCGGA 2 cut(s) 1521, 1573
EclXI CGGCCG 1 cut(s) 346
Eco130I CCWWGG 2 cut(s) 278, 707
Eco32I GATATC 1 cut(s) 1187
Eco47I GGWCC 1 cut(s) 1259
Eco52I CGGCCG 1 cut(s) 346
Eco57I CTGAAG 1 cut(s) 1194
Eco88I CYCGRG 2 cut(s) 431, 1394
EcoNI CCTNNNNNAGG 1 cut(s) 1212
EcoO109I RGGNCCY 1 cut(s) 1259
EcoRII CCWGG 2 cut(s) 770, 1063
EcoRV GATATC 1 cut(s) 1187
EcoT14I CCWWGG 2 cut(s) 278, 707
ErhI CCWWGG 2 cut(s) 278, 707
Esp3I CGTCTC 1 cut(s) 1232
FaeI CATG 3 cut(s) 496, 763, 1009
FalI AAGNNNNNCTT 4 cut(s) 161, 193, 1032, 1064
FaqI GGGAC 2 cut(s) 107, 895
FatI CATG 3 cut(s) 492, 759, 1005
FauI CCCGC 1 cut(s) 112
FblI GTMKAC 1 cut(s) 998
Fnu4HI GCNGC 8 cut(s) 303, 349, 768, 1110, 1139, 1272, 1380, 1712
FokI GGATG 2 cut(s) 890, 1604
Fsp4HI GCNGC 8 cut(s) 303, 349, 768, 1110, 1139, 1272, 1380, 1712
FspBI CTAG 5 cut(s) 53, 366, 533, 848, 1436
FspI TGCGCA 1 cut(s) 1600
GlaI GCGC 2 cut(s) 76, 1600
GluI GCNGC 8 cut(s) 303, 349, 768, 1110, 1139, 1272, 1380, 1712
GsuI CTGGAG 4 cut(s) 1005, 1317, 1721, 1799
HaeIII GGCC 2 cut(s) 126, 348
HapII CCGG 5 cut(s) 135, 345, 432, 899, 1739
HgaI GACGC 2 cut(s) 197, 1049
HhaI GCGC 2 cut(s) 77, 1601
Hin1I GRCGYC 1 cut(s) 208
Hin1II CATG 3 cut(s) 496, 763, 1009
Hin6I GCGC 2 cut(s) 75, 1599
HinP1I GCGC 2 cut(s) 75, 1599
HincII GTYRAC 2 cut(s) 409, 757
HindII GTYRAC 2 cut(s) 409, 757
HindIII AAGCTT 2 cut(s) 1603, 1663
HpaII CCGG 5 cut(s) 135, 345, 432, 899, 1739
HphI GGTGA 5 cut(s) 34, 68, 283, 534, 1082
Hpy188I TCNGA 6 cut(s) 325, 466, 571, 841, 1116, 1361
Hpy99I CGWCG 4 cut(s) 119, 122, 1227, 1723
HpyAV CCTTC 7 cut(s) 62, 163, 236, 437, 674, 1294, 1414
HpyCH4III ACNGT 5 cut(s) 524, 880, 928, 996, 1465
HpyCH4IV ACGT 1 cut(s) 784
HpyCH4V TGCA 7 cut(s) 223, 575, 665, 1126, 1379, 1452, 1769
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 72, 865, 1271, 1280
HpyF3I CTNAG 8 cut(s) 383, 840, 864, 950, 1266, 1358, 1386, 1553
HpySE526I ACGT 1 cut(s) 784
Hsp92I GRCGYC 1 cut(s) 208
Hsp92II CATG 3 cut(s) 496, 763, 1009
HspAI GCGC 2 cut(s) 75, 1599
Kzo9I GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
LmnI GCTCC 3 cut(s) 506, 1210, 1780
Lsp1109I GCAGC 6 cut(s) 289, 754, 1096, 1150, 1283, 1391
LweI GCATC 6 cut(s) 562, 652, 853, 912, 970, 1270
MaeI CTAG 5 cut(s) 53, 366, 533, 848, 1436
MaeII ACGT 1 cut(s) 784
MaeIII GTNAC 6 cut(s) 56, 199, 1369, 1454, 1610, 1722
MalI GATC 8 cut(s) 14, 336, 558, 584, 600, 642, 1305, 1737
MboI GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
MboII GAAGA 6 cut(s) 92, 135, 266, 295, 1465, 1672
MflI RGATCY 5 cut(s) 556, 582, 598, 1303, 1735
MhlI GDGCHC 1 cut(s) 1798
MlsI TGGCCA 1 cut(s) 126
MluCI AATT 7 cut(s) 195, 375, 528, 576, 882, 894, 1127
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 6 cut(s) 79, 89, 633, 961, 1324, 1397
MmeI TCCRAC 1 cut(s) 626
Mox20I TGGCCA 1 cut(s) 126
MroXI GAANNNNTTC 3 cut(s) 173, 287, 835
MscI TGGCCA 1 cut(s) 126
MseI TTAA 3 cut(s) 744, 885, 1340
MslI CAYNNNNRTG 1 cut(s) 1050
Msp20I TGGCCA 1 cut(s) 126
MspA1I CMGCKG 1 cut(s) 1274
MspI CCGG 5 cut(s) 135, 345, 432, 899, 1739
MspR9I CCNGG 6 cut(s) 136, 432, 433, 772, 900, 1065
Mva1269I GAATGC 2 cut(s) 1454, 1519
MvaI CCWGG 2 cut(s) 772, 1065
MvnI CGCG 2 cut(s) 184, 591
MwoI GCNNNNNNNGC 5 cut(s) 47, 72, 865, 1271, 1280
NciI CCSGG 4 cut(s) 136, 432, 433, 900
NdeII GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
NlaIII CATG 3 cut(s) 496, 763, 1009
NlaIV GGNNCC 2 cut(s) 600, 1737
NmeAIII GCCGAG 1 cut(s) 184
NmuCI GTSAC 1 cut(s) 56
NruI TCGCGA 1 cut(s) 591
NsbI TGCGCA 1 cut(s) 1600
PaeR7I CTCGAG 1 cut(s) 1394
PaqCI CACCTGC 1 cut(s) 553
PctI GAATGC 2 cut(s) 1454, 1519
PdmI GAANNNNTTC 3 cut(s) 173, 287, 835
PfeI GAWTC 4 cut(s) 724, 1235, 1544, 1811
PfoI TCCNGGA 1 cut(s) 134
PkrI GCNGC 8 cut(s) 304, 350, 769, 1111, 1140, 1273, 1381, 1713
PleI GAGTC 6 cut(s) 79, 89, 632, 960, 1324, 1396
PpsI GAGTC 6 cut(s) 79, 89, 632, 960, 1324, 1396
PpuMI RGGWCCY 1 cut(s) 1259
Psp5II RGGWCCY 1 cut(s) 1259
Psp6I CCWGG 2 cut(s) 770, 1063
PspGI CCWGG 2 cut(s) 770, 1063
PspN4I GGNNCC 2 cut(s) 600, 1737
PspPI GGNCC 1 cut(s) 1259
PspPPI RGGWCCY 1 cut(s) 1259
PstNI CAGNNNCTG 1 cut(s) 1385
PsuI RGATCY 5 cut(s) 556, 582, 598, 1303, 1735
PvuII CAGCTG 1 cut(s) 1274
RruI TCGCGA 1 cut(s) 591
RsaI GTAC 4 cut(s) 46, 477, 658, 1759
RsaNI GTAC 4 cut(s) 45, 476, 657, 1758
RseI CAYNNNNRTG 1 cut(s) 1050
SaqAI TTAA 3 cut(s) 744, 885, 1340
SatI GCNGC 8 cut(s) 303, 349, 768, 1110, 1139, 1272, 1380, 1712
Sau3AI GATC 8 cut(s) 12, 334, 556, 582, 598, 640, 1303, 1735
Sau96I GGNCC 1 cut(s) 1259
SchI GAGTC 6 cut(s) 79, 89, 633, 961, 1324, 1397
ScrFI CCNGG 6 cut(s) 136, 432, 433, 772, 900, 1065
SduI GDGCHC 1 cut(s) 1798
SfaNI GCATC 6 cut(s) 562, 652, 853, 912, 970, 1270
SfcI CTRYAG 2 cut(s) 1242, 1430
Sfr274I CTCGAG 1 cut(s) 1394
SinI GGWCC 1 cut(s) 1259
SlaI CTCGAG 1 cut(s) 1394
SmaI CCCGGG 1 cut(s) 433
SmiMI CAYNNNNRTG 1 cut(s) 1050
SmlI CTYRAG 2 cut(s) 1394, 1797
SmoI CTYRAG 2 cut(s) 1394, 1797
Sse9I AATT 7 cut(s) 195, 375, 528, 576, 882, 894, 1127
SsiI CCGC 8 cut(s) 105, 182, 260, 349, 1283, 1506, 1558, 1711
SspI AATATT 2 cut(s) 472, 675
SspMI CTAG 5 cut(s) 53, 366, 533, 848, 1436
StyD4I CCNGG 6 cut(s) 134, 430, 431, 770, 898, 1063
StyI CCWWGG 2 cut(s) 278, 707
TaaI ACNGT 5 cut(s) 524, 880, 928, 996, 1465
TaiI ACGT 1 cut(s) 787
TaqI TCGA 3 cut(s) 337, 1395, 1648
TasI AATT 7 cut(s) 195, 375, 528, 576, 882, 894, 1127
TatI WGTACW 2 cut(s) 44, 475
TauI GCSGC 2 cut(s) 351, 1714
TfiI GAWTC 4 cut(s) 724, 1235, 1544, 1811
Tru1I TTAA 3 cut(s) 744, 885, 1340
Tru9I TTAA 3 cut(s) 744, 885, 1340
TscAI CASTG 2 cut(s) 1330, 1690
TseFI GTSAC 1 cut(s) 56
TseI GCWGC 6 cut(s) 302, 767, 1109, 1138, 1271, 1379
Tsp45I GTSAC 1 cut(s) 56
TspDTI ATGAA 3 cut(s) 218, 368, 1536
TspGWI ACGGA 1 cut(s) 1466
TspMI CCCGGG 1 cut(s) 431
TspRI CASTG 2 cut(s) 1330, 1690
VpaK11BI GGWCC 1 cut(s) 1259
XagI CCTNNNNNAGG 1 cut(s) 1212
XapI RAATTY 1 cut(s) 894
XhoI CTCGAG 1 cut(s) 1394
XmaI CCCGGG 1 cut(s) 431
XmiI GTMKAC 1 cut(s) 998
XmnI GAANNNNTTC 3 cut(s) 173, 287, 835
XspI CTAG 5 cut(s) 53, 366, 533, 848, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.