Rroxscaffold_3G00261250
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
55581288 .. 55587450
6163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00261250.1

Sequence Viewer

Length: 2022 bp
ATGGAAAATCTGATCTCACTAGTCAACAAAATCCAAAGAGCTTGCACGGCTCTCGGTGACCACGGTGAAGCCAGCGCATTATCTTCTCTTTGGGACGCGCTCCCCTCCATTGCTGTCGTCGGTGGCCAAAGTTCAGGGAAGTCTTCTGTCTTGGAGAGCATTGTGGGGAAGGACTTCTTACCCCGTGGTTCTGGAATTGTTACTCGTCGTCCTCTTGTGTTACAGCTTCATAAGATTGACGAAGGTAGCGCAGAATATGCGGAGTTTCTCCACCTTCCGAGGAAAAGGTTCATATATTTTGCTGCCGTAAGAAAGGAAATTGCAGATGAGACAGATCGTGAAACTGGTCGCACCAAAATGATCTCCAGCGTTCCAATTCATCTTAGCATATATTCTCCTAATGTTGCCAACTTGACACTTGTTGATCTTCCTGGACTTACAAAAGTTGCTGTTGAGGGTCAGCCAAATAGTATTGTGCAGGACATTGAAAATATGGTTCGCTCCTATATTGAGAAGCCCAACTGTATAATTTTAGCAATTTCACCTGCTAATCAAGATCTTGCTACATCTGATGCAATTAAAATCTCTCGTGAAGTGGATCCAACCGGGGAGAGGACAATCGGAGTCTTGACAAAAATTGATCTTATGGACAAGGGTACTGATGCAGTTGAAATATTGGAAGGAAAGTCTTATCGCCTAAAATTTCCTTGGGTTGGGGTGGTGAATCGCTCTCAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTCGGCGTAGAGAACGTGAATATTTTTCAGGTACCCCCGAATACAAGCACCTTGCTCACAGAATGGGTTCCGAGTATCTAGCGAAAATGCTTTCTAAGCATTTGGAAACTGTAATTAAGACAAAAATCCCAGGCATCCGGTCCCTTATTAACGAGACCATTATTGAACTTGAAACCGAACTGAGTCGTCTTGGAAAGCCCACTGCTACTAATGATGTAGGGAAACTGTATGTAATCATGGAGATTTGTCGTCTATTTGATGAAATATATAAAGAACATCTTGATGGCGTCCGTCCTGGTCCTCTTGGAGGTGAAGAGATTTGCGATGTTTTTGATAAGAAACTTCCTGATGCTCTGATAAGATTGCAATTTGATAAGCAACTTTCAATGGAAAATATAAGAAAGGTCATTACCCAAGCTGATGGGTATCGACCTCATCTAATAGCTCCCGAACAAGGATACCGTCGTCTCATAGAATCCTCGGTAATTAGTATAAGAGATCCTGCTGAGGCTGCAGTCGATGCGGTTCATGGCCTTCTGAAGGATCTTGTTTACAAGGCTGTAAGTGAGACTCCGGAGCTAAGGCAGTATCCTGGTCTTAGAGCAGAGGTAACAAATGCAGCTTGCGCGTCACTTGAGAGAATGAGAGCAGAAAGCAAGAAAGCAACACTACAGTTAGTTGACATGGAGAGTTACTACCCGACAGTTGATTTCTTTCGTCAACTTCCTAAAGATGAGGAAGTTGACGAGGGTGGCAACCCACTTGATTTCTTTCGTCAACTTCCTCAAGATGTTTTTCGTCAACTTCTTCAAGCTGTTGACAAGGGTGGCAACCCAGTTGATTTCTTTCGTCAACTTCCTCAAGCTGTTATTGGTCAACTTCCTCAAGCTGTTTTTCGTCAACTTCTTCAAGCTGTTGACAAGGGTGGCAACCCATCACATCCACTGTCTGATAGATATAATGAATCTTATCTCAAGCGAATTGGGTCAAATGTTCTGGGCTATGTCAATATGGTTCGTTCAAGTTTACGCTACTCTATTCCCAAATCTGTTGTTTATTGCCAAGTCAGAGAGGCAAAACGAAGCTTACTGGTCCGTTTCTTCACCGATTTGGGTAAAATGGAGACGAAGCAGTTATCATCTTTGCTGAATGAGGATCCGGCAGTTGTGGAGAGGCGTACTGCCCTTGCGAAAAGGATGGAGTTATACAGGAGTGCTCAGGCAGAGATGGATACAGTTGCTTGGTCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000266 GO:0000278 GO:0000280 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0000911 GO:0000919 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005856 GO:0005874 GO:0005886 GO:0005911 GO:0006810 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007049 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009507 GO:0009524 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009888 GO:0009920 GO:0009987 GO:0010015 GO:0010026 GO:0010051 GO:0010053 GO:0010054 GO:0010090 GO:0010091 GO:0010154 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0021700 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0030054 GO:0030154 GO:0030276 GO:0031090 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032878 GO:0032989 GO:0034357 GO:0042546 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043424 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051301 GO:0055035 GO:0055044 GO:0061458 GO:0061640 GO:0065007 GO:0071554 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090626 GO:0090627 GO:0098588 GO:0098657 GO:0098805 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0140014 GO:1902410 GO:1903047 GO:1905392 GO:2000114
Pfam Domains
Protein Families

Protein Analysis

673

Amino Acids

75.43

Weight (kDa)

6.65

Isoelectric Point (pI)

41.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 37 - 213 3e-54 Dynamin family
Dynamin_M PF01031 221 - 493 3e-64 Dynamin central region
GED PF02212 577 - 668 9e-19 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 553
Acc36I ACCTGC 1 cut(s) 553
Acc65I GGTACC 1 cut(s) 800
AccB1I GGYRCC 1 cut(s) 800
AccII CGCG 2 cut(s) 98, 1397
AccIII TCCGGA 1 cut(s) 1342
AciI CCGC 2 cut(s) 260, 1292
AclWI GGATC 6 cut(s) 593, 606, 1262, 1320, 1919, 1932
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 1 cut(s) 701
AcuI CTGAAG 1 cut(s) 1328
AcyI GRCGYC 1 cut(s) 1056
AfaI GTAC 3 cut(s) 658, 802, 1948
AfiI CCNNNNNNNGG 5 cut(s) 612, 713, 1076, 1223, 1309
AgsI TTSAA 8 cut(s) 488, 671, 935, 941, 1155, 1580, 1679, 1791
AhlI ACTAGT 1 cut(s) 19
AjnI CCWGG 4 cut(s) 430, 898, 1063, 1360
Alw21I GWGCWC 1 cut(s) 1987
Alw26I GTCTC 5 cut(s) 323, 917, 1241, 1331, 1886
AlwI GGATC 6 cut(s) 593, 606, 1262, 1320, 1919, 1932
Aor13HI TCCGGA 1 cut(s) 1342
AoxI GGCC 2 cut(s) 124, 1300
ApeKI GCWGC 4 cut(s) 302, 767, 1280, 1388
ApoI RAATTY 1 cut(s) 701
Asp700I GAANNNNTTC 3 cut(s) 173, 287, 835
Asp718I GGTACC 1 cut(s) 800
AspLEI GCGC 4 cut(s) 77, 100, 251, 1397
AspS9I GGNCC 3 cut(s) 909, 1067, 1861
AsuC2I CCSGG 1 cut(s) 607
AsuHPI GGTGA 6 cut(s) 68, 77, 534, 733, 1091, 1864
AvaII GGWCC 3 cut(s) 909, 1067, 1861
BaeI ACNNNNGTAYC 2 cut(s) 1219, 1252
BalI TGGCCA 1 cut(s) 126
BamHI GGATCC 2 cut(s) 598, 1924
BanI GGYRCC 1 cut(s) 800
BauI CACGAG 1 cut(s) 588
BbsI GAAGAC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 1987
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 4 cut(s) 289, 754, 1267, 1400
BccI CCATC 5 cut(s) 1046, 1184, 1711, 1960, 1990
BceAI ACGGC 2 cut(s) 63, 290
BcgI CGANNNNNNTGC 2 cut(s) 34, 68
BciT130I CCWGG 4 cut(s) 432, 900, 1065, 1362
BciVI GTATCC 3 cut(s) 1220, 1368, 1993
BcnI CCSGG 1 cut(s) 607
BcoDI GTCTC 5 cut(s) 323, 917, 1241, 1331, 1886
BcuI ACTAGT 1 cut(s) 19
BfaI CTAG 2 cut(s) 20, 848
BfmI CTRYAG 2 cut(s) 1281, 1439
BfuAI ACCTGC 1 cut(s) 553
BfuI GTATCC 3 cut(s) 1220, 1368, 1993
BglII AGATCT 1 cut(s) 556
BisI GCNGC 4 cut(s) 303, 768, 1281, 1389
BlsI GCNGC 4 cut(s) 304, 769, 1282, 1390
Bme1390I CCNGG 5 cut(s) 432, 607, 900, 1065, 1362
Bme18I GGWCC 3 cut(s) 909, 1067, 1861
BmgT120I GGNCC 3 cut(s) 909, 1067, 1861
BmiI GGNNCC 5 cut(s) 600, 802, 838, 911, 1926
BmrFI CCNGG 5 cut(s) 432, 607, 900, 1065, 1362
BmrI ACTGGG 1 cut(s) 1598
BmsI GCATC 5 cut(s) 562, 652, 912, 1108, 1279
BmuI ACTGGG 1 cut(s) 1598
BpiI GAAGAC 1 cut(s) 135
BpmI CTGGAG 1 cut(s) 349
Bpu10I CCTNAGC 3 cut(s) 1275, 1349, 1986
BpuEI CTTGAG 6 cut(s) 717, 1424, 1539, 1614, 1638, 1727
BpuMI CCSGG 1 cut(s) 607
BsaBI GATNNNNATC 1 cut(s) 1194
BsaHI GRCGYC 1 cut(s) 1056
BsaI GGTCTC 1 cut(s) 917
BsaJI CCNNGG 7 cut(s) 61, 184, 278, 606, 707, 898, 1248
BsaWI WCCGGW 2 cut(s) 906, 1342
Bsc4I CCNNNNNNNGG 5 cut(s) 612, 713, 1076, 1223, 1309
Bse1I ACTGG 3 cut(s) 349, 1604, 1863
Bse3DI GCAATG 1 cut(s) 108
Bse8I GATNNNNATC 1 cut(s) 1194
BseAI TCCGGA 1 cut(s) 1342
BseBI CCWGG 4 cut(s) 432, 900, 1065, 1362
BseDI CCNNGG 7 cut(s) 61, 184, 278, 606, 707, 898, 1248
BseGI GGATG 3 cut(s) 903, 1708, 1971
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 5 cut(s) 612, 713, 1076, 1223, 1309
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 4 cut(s) 941, 1266, 2000, 2007
BseNI ACTGG 3 cut(s) 349, 1604, 1863
BseXI GCAGC 4 cut(s) 289, 754, 1267, 1400
BsgI GTGCAG 1 cut(s) 497
Bsh1236I CGCG 2 cut(s) 98, 1397
BshFI GGCC 2 cut(s) 126, 1302
BshNI GGYRCC 1 cut(s) 800
BsiHKAI GWGCWC 1 cut(s) 1987
BsiSI CCGG 4 cut(s) 606, 907, 1343, 1928
BslFI GGGAC 2 cut(s) 107, 895
BslI CCNNNNNNNGG 5 cut(s) 612, 713, 1076, 1223, 1309
BsmAI GTCTC 5 cut(s) 323, 917, 1241, 1331, 1886
BsmBI CGTCTC 2 cut(s) 1241, 1886
BsmFI GGGAC 2 cut(s) 107, 895
BsnI GGCC 2 cut(s) 126, 1302
Bso31I GGTCTC 1 cut(s) 917
Bsp1286I GDGCHC 1 cut(s) 1987
Bsp13I TCCGGA 1 cut(s) 1342
BspACI CCGC 2 cut(s) 260, 1292
BspANI GGCC 2 cut(s) 126, 1302
BspCNI CTCAG 4 cut(s) 942, 1267, 1999, 2008
BspEI TCCGGA 1 cut(s) 1342
BspFNI CGCG 2 cut(s) 98, 1397
BspLI GGNNCC 5 cut(s) 600, 802, 838, 911, 1926
BspMAI CTGCAG 1 cut(s) 1285
BspMI ACCTGC 1 cut(s) 553
BspPI GGATC 6 cut(s) 593, 606, 1262, 1320, 1919, 1932
BspT107I GGYRCC 1 cut(s) 800
BspTNI GGTCTC 1 cut(s) 917
BsrDI GCAATG 1 cut(s) 108
BsrI ACTGG 3 cut(s) 349, 1604, 1863
BssECI CCNNGG 7 cut(s) 61, 184, 278, 606, 707, 898, 1248
BssNI GRCGYC 1 cut(s) 1056
BssSI CACGAG 1 cut(s) 588
BssT1I CCWWGG 1 cut(s) 707
Bst2BI CACGAG 1 cut(s) 588
Bst2UI CCWGG 4 cut(s) 432, 900, 1065, 1362
Bst4CI ACNGT 9 cut(s) 65, 524, 880, 996, 1232, 1443, 1474, 1716, 2005
Bst6I CTCTTC 1 cut(s) 1077
BstACI GRCGYC 1 cut(s) 1056
BstAPI GCANNNNNTGC 2 cut(s) 257, 1289
BstC8I GCNNGC 3 cut(s) 43, 73, 1393
BstDEI CTNAG 8 cut(s) 383, 864, 950, 1275, 1349, 1367, 1986, 2016
BstDSI CCRYGG 2 cut(s) 61, 184
BstEII GGTNACC 1 cut(s) 56
BstENI CCTNNNNNAGG 2 cut(s) 1074, 1307
BstF5I GGATG 3 cut(s) 903, 1708, 1971
BstFNI CGCG 2 cut(s) 98, 1397
BstHHI GCGC 4 cut(s) 77, 100, 251, 1397
BstMAI GTCTC 5 cut(s) 323, 917, 1241, 1331, 1886
BstMWI GCNNNNNNNGC 6 cut(s) 47, 257, 865, 1280, 1289, 1394
BstNI CCWGG 4 cut(s) 432, 900, 1065, 1362
BstPI GGTNACC 1 cut(s) 56
BstSCI CCNGG 5 cut(s) 430, 605, 898, 1063, 1360
BstSFI CTRYAG 2 cut(s) 1281, 1439
BstUI CGCG 2 cut(s) 98, 1397
BstV1I GCAGC 4 cut(s) 289, 754, 1267, 1400
BstV2I GAAGAC 1 cut(s) 135
BstX2I RGATCY 5 cut(s) 556, 598, 1267, 1312, 1924
BstXI CCANNNNNNTGG 1 cut(s) 1190
BstYI RGATCY 5 cut(s) 556, 598, 1267, 1312, 1924
BsuI GTATCC 3 cut(s) 1220, 1368, 1993
BsuRI GGCC 2 cut(s) 126, 1302
BtgI CCRYGG 2 cut(s) 61, 184
BtgZI GCGATG 1 cut(s) 1107
BtsCI GGATG 3 cut(s) 903, 1708, 1971
BtsI GCAGTG 1 cut(s) 969
BtsIMutI CAGTG 2 cut(s) 969, 1712
BveI ACCTGC 1 cut(s) 553
Cac8I GCNNGC 3 cut(s) 43, 73, 1393
CfoI GCGC 4 cut(s) 77, 100, 251, 1397
Cfr13I GGNCC 3 cut(s) 909, 1067, 1861
CseI GACGC 3 cut(s) 104, 1045, 1386
Csp6I GTAC 3 cut(s) 657, 801, 1947
CviAII CATG 4 cut(s) 760, 1006, 1298, 1453
CviQI GTAC 3 cut(s) 657, 801, 1947
DdeI CTNAG 8 cut(s) 383, 864, 950, 1275, 1349, 1367, 1986, 2016
EaeI YGGCCR 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 1077
EarI CTCTTC 1 cut(s) 1077
Eco130I CCWWGG 1 cut(s) 707
Eco31I GGTCTC 1 cut(s) 917
Eco47I GGWCC 3 cut(s) 909, 1067, 1861
Eco57I CTGAAG 1 cut(s) 1328
Eco91I GGTNACC 1 cut(s) 56
EcoNI CCTNNNNNAGG 2 cut(s) 1074, 1307
EcoO65I GGTNACC 1 cut(s) 56
EcoRII CCWGG 4 cut(s) 430, 898, 1063, 1360
EcoT14I CCWWGG 1 cut(s) 707
ErhI CCWWGG 1 cut(s) 707
Esp3I CGTCTC 2 cut(s) 1241, 1886
FaeI CATG 4 cut(s) 763, 1009, 1301, 1456
FalI AAGNNNNNCTT 4 cut(s) 161, 193, 1032, 1064
FaqI GGGAC 2 cut(s) 107, 895
FatI CATG 4 cut(s) 759, 1005, 1297, 1452
Fnu4HI GCNGC 4 cut(s) 303, 768, 1281, 1389
FokI GGATG 3 cut(s) 890, 1695, 1978
Fsp4HI GCNGC 4 cut(s) 303, 768, 1281, 1389
FspBI CTAG 2 cut(s) 20, 848
GlaI GCGC 4 cut(s) 76, 99, 250, 1396
GluI GCNGC 4 cut(s) 303, 768, 1281, 1389
GsuI CTGGAG 1 cut(s) 349
HaeIII GGCC 2 cut(s) 126, 1302
HapII CCGG 4 cut(s) 606, 907, 1343, 1928
HgaI GACGC 3 cut(s) 104, 1045, 1386
HhaI GCGC 4 cut(s) 77, 100, 251, 1397
Hin1I GRCGYC 1 cut(s) 1056
Hin1II CATG 4 cut(s) 763, 1009, 1301, 1456
Hin6I GCGC 4 cut(s) 75, 98, 249, 1395
HinP1I GCGC 4 cut(s) 75, 98, 249, 1395
HindIII AAGCTT 1 cut(s) 1852
HinfI GANTC 6 cut(s) 624, 724, 952, 1244, 1339, 1733
HpaII CCGG 4 cut(s) 606, 907, 1343, 1928
HphI GGTGA 6 cut(s) 68, 77, 534, 733, 1091, 1864
Hpy99I CGWCG 3 cut(s) 122, 210, 1236
HpyAV CCTTC 6 cut(s) 163, 236, 284, 674, 1303, 1313
HpyCH4III ACNGT 9 cut(s) 65, 524, 880, 996, 1232, 1443, 1474, 1716, 2005
HpyCH4IV ACGT 1 cut(s) 784
HpyCH4V TGCA 8 cut(s) 45, 323, 478, 575, 665, 1135, 1283, 1388
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 257, 865, 1280, 1289, 1394
HpyF3I CTNAG 8 cut(s) 383, 864, 950, 1275, 1349, 1367, 1986, 2016
HpySE526I ACGT 1 cut(s) 784
Hsp92I GRCGYC 1 cut(s) 1056
Hsp92II CATG 4 cut(s) 763, 1009, 1301, 1456
HspAI GCGC 4 cut(s) 75, 98, 249, 1395
Kpn2I TCCGGA 1 cut(s) 1342
KpnI GGTACC 1 cut(s) 804
LmnI GCTCC 4 cut(s) 105, 506, 1219, 1345
Lsp1109I GCAGC 4 cut(s) 289, 754, 1267, 1400
LweI GCATC 5 cut(s) 562, 652, 912, 1108, 1279
MaeI CTAG 2 cut(s) 20, 848
MaeII ACGT 1 cut(s) 784
MaeIII GTNAC 6 cut(s) 56, 199, 219, 1378, 1398, 1460
MboII GAAGA 7 cut(s) 75, 135, 419, 1094, 1568, 1667, 1861
MflI RGATCY 5 cut(s) 556, 598, 1267, 1312, 1924
MhlI GDGCHC 1 cut(s) 1987
MlsI TGGCCA 1 cut(s) 126
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 3 cut(s) 633, 961, 1333
MmeI TCCRAC 1 cut(s) 626
Mox20I TGGCCA 1 cut(s) 126
MroI TCCGGA 1 cut(s) 1342
MroXI GAANNNNTTC 3 cut(s) 173, 287, 835
MscI TGGCCA 1 cut(s) 126
MseI TTAA 4 cut(s) 579, 744, 885, 918
MslI CAYNNNNRTG 2 cut(s) 356, 1050
Msp20I TGGCCA 1 cut(s) 126
MspI CCGG 4 cut(s) 606, 907, 1343, 1928
MspR9I CCNGG 5 cut(s) 432, 607, 900, 1065, 1362
MvaI CCWGG 4 cut(s) 432, 900, 1065, 1362
MvnI CGCG 2 cut(s) 98, 1397
MwoI GCNNNNNNNGC 6 cut(s) 47, 257, 865, 1280, 1289, 1394
NciI CCSGG 1 cut(s) 607
NlaIII CATG 4 cut(s) 763, 1009, 1301, 1456
NlaIV GGNNCC 5 cut(s) 600, 802, 838, 911, 1926
NmeAIII GCCGAG 1 cut(s) 751
NmuCI GTSAC 2 cut(s) 56, 1398
PaqCI CACCTGC 1 cut(s) 553
PdmI GAANNNNTTC 3 cut(s) 173, 287, 835
PfeI GAWTC 3 cut(s) 724, 1244, 1733
PfoI TCCNGGA 1 cut(s) 430
PkrI GCNGC 4 cut(s) 304, 769, 1282, 1390
PleI GAGTC 3 cut(s) 632, 960, 1333
PpsI GAGTC 3 cut(s) 632, 960, 1333
Psp6I CCWGG 4 cut(s) 430, 898, 1063, 1360
PspEI GGTNACC 1 cut(s) 56
PspGI CCWGG 4 cut(s) 430, 898, 1063, 1360
PspN4I GGNNCC 5 cut(s) 600, 802, 838, 911, 1926
PspPI GGNCC 3 cut(s) 909, 1067, 1861
PstI CTGCAG 1 cut(s) 1285
PsuI RGATCY 5 cut(s) 556, 598, 1267, 1312, 1924
RsaI GTAC 3 cut(s) 658, 802, 1948
RsaNI GTAC 3 cut(s) 657, 801, 1947
RseI CAYNNNNRTG 2 cut(s) 356, 1050
SaqAI TTAA 4 cut(s) 579, 744, 885, 918
SatI GCNGC 4 cut(s) 303, 768, 1281, 1389
Sau96I GGNCC 3 cut(s) 909, 1067, 1861
SchI GAGTC 3 cut(s) 633, 961, 1333
ScrFI CCNGG 5 cut(s) 432, 607, 900, 1065, 1362
SduI GDGCHC 1 cut(s) 1987
SfaNI GCATC 5 cut(s) 562, 652, 912, 1108, 1279
SfcI CTRYAG 2 cut(s) 1281, 1439
SinI GGWCC 3 cut(s) 909, 1067, 1861
SmiMI CAYNNNNRTG 2 cut(s) 356, 1050
SmlI CTYRAG 6 cut(s) 732, 1403, 1554, 1629, 1653, 1742
SmoI CTYRAG 6 cut(s) 732, 1403, 1554, 1629, 1653, 1742
SpeI ACTAGT 1 cut(s) 19
SsiI CCGC 2 cut(s) 260, 1292
SspI AATATT 2 cut(s) 675, 791
SspMI CTAG 2 cut(s) 20, 848
StyD4I CCNGG 5 cut(s) 430, 605, 898, 1063, 1360
StyI CCWWGG 1 cut(s) 707
TaaI ACNGT 9 cut(s) 65, 524, 880, 996, 1232, 1443, 1474, 1716, 2005
TaiI ACGT 1 cut(s) 787
TaqI TCGA 2 cut(s) 1198, 1287
TfiI GAWTC 3 cut(s) 724, 1244, 1733
Tru1I TTAA 4 cut(s) 579, 744, 885, 918
Tru9I TTAA 4 cut(s) 579, 744, 885, 918
TscAI CASTG 2 cut(s) 976, 1719
TseFI GTSAC 2 cut(s) 56, 1398
TseI GCWGC 4 cut(s) 302, 767, 1280, 1388
Tsp45I GTSAC 2 cut(s) 56, 1398
TspDTI ATGAA 6 cut(s) 218, 280, 368, 1044, 1286, 1746
TspGWI ACGGA 2 cut(s) 1049, 1853
TspRI CASTG 2 cut(s) 976, 1719
VpaK11BI GGWCC 3 cut(s) 909, 1067, 1861
XagI CCTNNNNNAGG 2 cut(s) 1074, 1307
XapI RAATTY 1 cut(s) 701
XmnI GAANNNNTTC 3 cut(s) 173, 287, 835
XspI CTAG 2 cut(s) 20, 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.