Rw7G012300
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0005955
Physical Location & Seq
Reverse (-)
11617943 .. 11623652
5710 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G012300.1

Sequence Viewer

Length: 1833 bp
ATGGAGAATCTGATCTCGCTAGTCAACAAAATCCAAAGAGCCTGCACGGCTCTCGGTGACCACGGCGAAGCCAGCGCATTACCGACTCTCTGGGACGCGCTCCCCTCCATCGCCGTCGTCGGTGGCCAGAGTTCAGGGAAGTCTTCTGTCTTGGAGAGCATCGTGGGGAAGGACTTCTTGCCCCGTGGTTCTGGAATTGTTACTCGTCGTCCTCTTGTGTTGCAGCTTCATAAGATTGACGAAGGCAGCAGAGAATATGCGGAGTTTCTCCACCTTCCGAGGAAAAGGTTCACAGATTTTGCTGCCGTAAGAAAGGAAATTGCAGATGAGACAGATCGTGAAACTGGTCGCAGCAAAATGATCTCCAGCGTTCCAATTCATCTTAGCATATATTCTCCTAATGTTGTCAACTTGACACTTGTTGATCTTCCTGGGCTTACAAAAGTTGCTGTCGAGGGTCAGCCAGATAGTATTGTGCAGGACATTGAAAATATGGTTCGCTCCTATATTGAGAAGCCCAACAGTATAATTTTAGCAATTTCACCTGCTAATCAAGATCTTGCTACATCTGATGCAATTAAAATCTCTCGTGAAGTGGATCCAACAGGGGAAAGGACACTCGGAGTCTTGACAAAAATTGATCTTATGGACAAGGGTACTGATGCAGTTGAAATATTGGAAGGAAAGTCTTATCGCCTAAAATTTCCTTGGGTTGGGGTCGTGAATCGCTCTCAACAAGATATTAACAAGAATGTTGACATGATTGCTGCTCGGCGTAGAGAACGTGAATATTTTTCAGGTACCCCAGAATACAAGCACCTTGCTCACAGAATGGGTTCTGAGCATCTAGCAAAAATGCTTTCTAAGCATTTGGAAACTGTAATTAAGACAAAAATCCCAGGCATCCAGTCCCTTATTAACAAGACCATTGTTGAACTTGAAACTGAACTGAGTCGTCTTGGAAAGCCCATTGCTACTGATGCTGGAGGGAAACTGTATGCAATCATGGAGATTTGTCGTCTATTTGATGGAACATATAAAGAACATCTTGATGGCGTGCGTCCTGGAGGTGATAAGATTTACAATGTCTTTGATAACCAACTTCCTGCTGCTCTGAAAAGATTGCAATTTGATAAGCAACTTTCAATGGAAAATATAAGAAAGCTCATTACTGAAGCTGATGGGTATCAACCTCATCTAATAGCTCCCGAACAAGGATACCGTCGTCTCATAGAATCCTCAGTAATTAGTATAAGAGGTCCTGCTGAGGCTGCAGTCGATGCGGTTCACGGCCTTCTGAAGGATCTCGTTCACAAGGCTGTAAGTGAGACTCCGGAGCTAAGGCAGTATCCTGGTCTTAGAGCAGAGGTAACAAATGCAGCTTGCGAGTCACTTGAGAGAATGAGAGCAGAAAGCAAGAAAGCAACACTACAGTTAGTTGATATGGAGTGTAGTTACCTGACAGTTGATTTCTTTCGTAAACTTCCTCAAGATGTTGACAAGGGTGGCAACCCATCACATTCACTGTTTGATAGATACAATGACTCTTATCTCAGGCGAATTGGGTCAAACGTTCTGGCCTATGTCAATATGGTTTGTGCAAGTTTACGCAACTCTATTCCCAAGTCTGTTGTTTATTGCCAAGTCAGAGAGGCAAAACGAAGCTTACTGGACCGTTTCTTCACCGATTTGGGTAAACTGGAGACGAAGCAGTTGTCATCTTTGCTGAATGAGGATCCGGCAGTTATGGAGAGGCGTACTGCCCTTGCAAAAAGGCTGGAGCTATACAGGAGTGCTCAGGCAGAGATGGATACAGTTGCTTGGTCTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000266 GO:0000278 GO:0000280 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0000911 GO:0000919 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005856 GO:0005874 GO:0005886 GO:0005911 GO:0006810 GO:0006897 GO:0006898 GO:0006996 GO:0007005 GO:0007049 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009506 GO:0009507 GO:0009524 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009832 GO:0009888 GO:0009920 GO:0009987 GO:0010015 GO:0010026 GO:0010051 GO:0010053 GO:0010054 GO:0010090 GO:0010091 GO:0010154 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0021700 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0030054 GO:0030154 GO:0030276 GO:0031090 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032506 GO:0032878 GO:0032989 GO:0034357 GO:0042546 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043424 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044436 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048364 GO:0048468 GO:0048469 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048766 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051301 GO:0055035 GO:0055044 GO:0061458 GO:0061640 GO:0065007 GO:0071554 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0072583 GO:0090558 GO:0090626 GO:0090627 GO:0098588 GO:0098657 GO:0098805 GO:0099080 GO:0099081 GO:0099402 GO:0099512 GO:0099513 GO:0140014 GO:1902410 GO:1903047 GO:1905392 GO:2000114
KEGG Pathways
Metabolic & Signaling
ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100
Pfam Domains
Protein Families
Dynamin_M Dynamin_N GED

Protein Analysis

610

Amino Acids

68.12

Weight (kDa)

8.3

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 37 - 213 6.9e-55 Dynamin family
Dynamin_M PF01031 221 - 489 5.8e-66 Dynamin central region
GED PF02212 514 - 605 3.5e-21 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 553
Acc36I ACCTGC 1 cut(s) 553
Acc65I GGTACC 1 cut(s) 800
AccB1I GGYRCC 1 cut(s) 800
AccII CGCG 1 cut(s) 98
AccIII TCCGGA 1 cut(s) 1333
AciI CCGC 2 cut(s) 260, 1283
AclI AACGTT 1 cut(s) 1572
AclWI GGATC 5 cut(s) 593, 606, 1311, 1730, 1743
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 1 cut(s) 701
AcuI CTGAAG 2 cut(s) 1194, 1319
AfaI GTAC 3 cut(s) 658, 802, 1759
AfiI CCNNNNNNNGG 3 cut(s) 713, 1214, 1300
AgsI TTSAA 5 cut(s) 488, 671, 935, 941, 1146
AjnI CCWGG 4 cut(s) 430, 898, 1063, 1351
AluBI AGCT 8 cut(s) 226, 1165, 1178, 1205, 1339, 1382, 1665, 1783
AluI AGCT 8 cut(s) 226, 1165, 1178, 1205, 1339, 1382, 1665, 1783
Alw21I GWGCWC 1 cut(s) 1798
Alw26I GTCTC 4 cut(s) 323, 1232, 1322, 1697
AlwI GGATC 5 cut(s) 593, 606, 1311, 1730, 1743
Aor13HI TCCGGA 1 cut(s) 1333
AoxI GGCC 3 cut(s) 124, 1291, 1578
ApeKI GCWGC 8 cut(s) 223, 246, 302, 351, 767, 1109, 1271, 1379
ApoI RAATTY 1 cut(s) 701
ArsI GACNNNNNNTTYG 2 cut(s) 1700, 1732
Asp700I GAANNNNTTC 3 cut(s) 173, 287, 835
Asp718I GGTACC 1 cut(s) 800
AspLEI GCGC 2 cut(s) 77, 100
AspS9I GGNCC 2 cut(s) 1259, 1672
AsuHPI GGTGA 4 cut(s) 68, 534, 1082, 1675
AvaII GGWCC 2 cut(s) 1259, 1672
BaeI ACNNNNGTAYC 2 cut(s) 1210, 1243
BalI TGGCCA 1 cut(s) 126
BamHI GGATCC 2 cut(s) 598, 1735
BanI GGYRCC 1 cut(s) 800
BauI CACGAG 1 cut(s) 588
BbsI GAAGAC 1 cut(s) 135
Bbv12I GWGCWC 1 cut(s) 1798
BbvCI CCTCAGC 1 cut(s) 1266
BbvI GCAGC 8 cut(s) 235, 258, 289, 363, 754, 1096, 1258, 1391
BccI CCATC 6 cut(s) 116, 1022, 1046, 1175, 1522, 1801
BceAI ACGGC 5 cut(s) 63, 79, 98, 290, 1306
BcgI CGANNNNNNTGC 2 cut(s) 34, 68
BciT130I CCWGG 4 cut(s) 432, 900, 1065, 1353
BciVI GTATCC 3 cut(s) 1211, 1359, 1804
BcoDI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BfaI CTAG 2 cut(s) 20, 848
BfmI CTRYAG 2 cut(s) 1272, 1430
BfuAI ACCTGC 1 cut(s) 553
BfuI GTATCC 3 cut(s) 1211, 1359, 1804
BglI GCCNNNNNGGC 1 cut(s) 47
BglII AGATCT 1 cut(s) 556
BisI GCNGC 8 cut(s) 224, 247, 303, 352, 768, 1110, 1272, 1380
BlsI GCNGC 8 cut(s) 225, 248, 304, 353, 769, 1111, 1273, 1381
Bme1390I CCNGG 4 cut(s) 432, 900, 1065, 1353
Bme18I GGWCC 2 cut(s) 1259, 1672
BmgT120I GGNCC 2 cut(s) 1259, 1672
BmiI GGNNCC 3 cut(s) 600, 802, 1737
BmrFI CCNGG 4 cut(s) 432, 900, 1065, 1353
BmsI GCATC 7 cut(s) 168, 562, 652, 853, 912, 970, 1270
BpiI GAAGAC 1 cut(s) 135
BpmI CTGGAG 5 cut(s) 349, 1005, 1086, 1721, 1799
Bpu10I CCTNAGC 3 cut(s) 1266, 1340, 1797
BpuEI CTTGAG 2 cut(s) 1415, 1473
BsaBI GATNNNNATC 1 cut(s) 1185
BsaJI CCNNGG 6 cut(s) 61, 184, 278, 431, 707, 898
BsaWI WCCGGW 1 cut(s) 1333
Bsc4I CCNNNNNNNGG 3 cut(s) 713, 1214, 1300
Bse1I ACTGG 4 cut(s) 349, 907, 1674, 1704
Bse3DI GCAATG 1 cut(s) 969
Bse8I GATNNNNATC 1 cut(s) 1185
BseAI TCCGGA 1 cut(s) 1333
BseBI CCWGG 4 cut(s) 432, 900, 1065, 1353
BseDI CCNNGG 6 cut(s) 61, 184, 278, 431, 707, 898
BseGI GGATG 1 cut(s) 903
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 3 cut(s) 713, 1214, 1300
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 6 cut(s) 831, 941, 1254, 1257, 1567, 1811
BseNI ACTGG 4 cut(s) 349, 907, 1674, 1704
BseXI GCAGC 8 cut(s) 235, 258, 289, 363, 754, 1096, 1258, 1391
BsgI GTGCAG 2 cut(s) 28, 497
Bsh1236I CGCG 1 cut(s) 98
BshFI GGCC 3 cut(s) 126, 1293, 1580
BshNI GGYRCC 1 cut(s) 800
BsiHKAI GWGCWC 1 cut(s) 1798
BsiSI CCGG 2 cut(s) 1334, 1739
BslFI GGGAC 2 cut(s) 107, 895
BslI CCNNNNNNNGG 3 cut(s) 713, 1214, 1300
BsmAI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BsmBI CGTCTC 2 cut(s) 1232, 1697
BsmFI GGGAC 2 cut(s) 107, 895
BsnI GGCC 3 cut(s) 126, 1293, 1580
Bsp1286I GDGCHC 1 cut(s) 1798
Bsp13I TCCGGA 1 cut(s) 1333
Bsp143I GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
BspACI CCGC 2 cut(s) 260, 1283
BspANI GGCC 3 cut(s) 126, 1293, 1580
BspCNI CTCAG 6 cut(s) 832, 942, 1253, 1258, 1566, 1810
BspEI TCCGGA 1 cut(s) 1333
BspFNI CGCG 1 cut(s) 98
BspLI GGNNCC 3 cut(s) 600, 802, 1737
BspMAI CTGCAG 1 cut(s) 1276
BspMI ACCTGC 1 cut(s) 553
BspPI GGATC 5 cut(s) 593, 606, 1311, 1730, 1743
BspT107I GGYRCC 1 cut(s) 800
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 4 cut(s) 349, 907, 1674, 1704
BssECI CCNNGG 6 cut(s) 61, 184, 278, 431, 707, 898
BssMI GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
BssSI CACGAG 1 cut(s) 588
BssT1I CCWWGG 1 cut(s) 707
Bst2BI CACGAG 1 cut(s) 588
Bst2UI CCWGG 4 cut(s) 432, 900, 1065, 1353
Bst4CI ACNGT 9 cut(s) 524, 880, 996, 1223, 1434, 1465, 1527, 1676, 1816
BstAPI GCANNNNNTGC 1 cut(s) 1280
BstC8I GCNNGC 4 cut(s) 43, 73, 1058, 1384
BstDSI CCRYGG 2 cut(s) 61, 184
BstEII GGTNACC 1 cut(s) 56
BstENI CCTNNNNNAGG 1 cut(s) 1298
BstF5I GGATG 1 cut(s) 903
BstFNI CGCG 1 cut(s) 98
BstHHI GCGC 2 cut(s) 77, 100
BstKTI GATC 9 cut(s) 15, 337, 363, 427, 559, 601, 643, 1306, 1738
BstMAI GTCTC 4 cut(s) 323, 1232, 1322, 1697
BstMBI GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
BstMWI GCNNNNNNNGC 6 cut(s) 47, 72, 865, 980, 1271, 1280
BstNI CCWGG 4 cut(s) 432, 900, 1065, 1353
BstPI GGTNACC 1 cut(s) 56
BstSCI CCNGG 4 cut(s) 430, 898, 1063, 1351
BstSFI CTRYAG 2 cut(s) 1272, 1430
BstUI CGCG 1 cut(s) 98
BstV1I GCAGC 8 cut(s) 235, 258, 289, 363, 754, 1096, 1258, 1391
BstV2I GAAGAC 1 cut(s) 135
BstX2I RGATCY 4 cut(s) 556, 598, 1303, 1735
BstYI RGATCY 4 cut(s) 556, 598, 1303, 1735
BsuI GTATCC 3 cut(s) 1211, 1359, 1804
BsuRI GGCC 3 cut(s) 126, 1293, 1580
BtgI CCRYGG 2 cut(s) 61, 184
BtgZI GCGATG 1 cut(s) 94
BtsCI GGATG 1 cut(s) 903
BtsIMutI CAGTG 1 cut(s) 1523
BveI ACCTGC 1 cut(s) 553
Cac8I GCNNGC 4 cut(s) 43, 73, 1058, 1384
CfoI GCGC 2 cut(s) 77, 100
Cfr13I GGNCC 2 cut(s) 1259, 1672
CseI GACGC 2 cut(s) 104, 1049
Csp6I GTAC 3 cut(s) 657, 801, 1758
CviAII CATG 2 cut(s) 760, 1006
CviQI GTAC 3 cut(s) 657, 801, 1758
DpnI GATC 9 cut(s) 14, 336, 362, 426, 558, 600, 642, 1305, 1737
DpnII GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
EaeI YGGCCR 1 cut(s) 124
Eco130I CCWWGG 1 cut(s) 707
Eco47I GGWCC 2 cut(s) 1259, 1672
Eco57I CTGAAG 2 cut(s) 1194, 1319
Eco91I GGTNACC 1 cut(s) 56
EcoNI CCTNNNNNAGG 1 cut(s) 1298
EcoO109I RGGNCCY 1 cut(s) 1259
EcoO65I GGTNACC 1 cut(s) 56
EcoRII CCWGG 4 cut(s) 430, 898, 1063, 1351
EcoT14I CCWWGG 1 cut(s) 707
ErhI CCWWGG 1 cut(s) 707
Esp3I CGTCTC 2 cut(s) 1232, 1697
FaeI CATG 2 cut(s) 763, 1009
FalI AAGNNNNNCTT 4 cut(s) 161, 193, 1032, 1064
FaqI GGGAC 2 cut(s) 107, 895
FatI CATG 2 cut(s) 759, 1005
Fnu4HI GCNGC 8 cut(s) 224, 247, 303, 352, 768, 1110, 1272, 1380
FokI GGATG 1 cut(s) 890
Fsp4HI GCNGC 8 cut(s) 224, 247, 303, 352, 768, 1110, 1272, 1380
FspBI CTAG 2 cut(s) 20, 848
GlaI GCGC 2 cut(s) 76, 99
GluI GCNGC 8 cut(s) 224, 247, 303, 352, 768, 1110, 1272, 1380
GsuI CTGGAG 5 cut(s) 349, 1005, 1086, 1721, 1799
HaeIII GGCC 3 cut(s) 126, 1293, 1580
HapII CCGG 2 cut(s) 1334, 1739
HgaI GACGC 2 cut(s) 104, 1049
HhaI GCGC 2 cut(s) 77, 100
Hin1II CATG 2 cut(s) 763, 1009
Hin6I GCGC 2 cut(s) 75, 98
HinP1I GCGC 2 cut(s) 75, 98
HincII GTYRAC 4 cut(s) 25, 409, 757, 1498
HindII GTYRAC 4 cut(s) 25, 409, 757, 1498
HindIII AAGCTT 1 cut(s) 1663
HinfI GANTC 9 cut(s) 7, 85, 624, 724, 952, 1235, 1330, 1388, 1544
HpaII CCGG 2 cut(s) 1334, 1739
HphI GGTGA 4 cut(s) 68, 534, 1082, 1675
Hpy188I TCNGA 8 cut(s) 12, 279, 571, 623, 841, 1116, 1299, 1649
Hpy99I CGWCG 4 cut(s) 119, 122, 210, 1227
HpyAV CCTTC 6 cut(s) 163, 236, 284, 674, 1294, 1304
HpyCH4III ACNGT 9 cut(s) 524, 880, 996, 1223, 1434, 1465, 1527, 1676, 1816
HpyCH4IV ACGT 2 cut(s) 784, 1572
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 72, 865, 980, 1271, 1280
HpySE526I ACGT 2 cut(s) 784, 1572
Hsp92II CATG 2 cut(s) 763, 1009
HspAI GCGC 2 cut(s) 75, 98
Kpn2I TCCGGA 1 cut(s) 1333
KpnI GGTACC 1 cut(s) 804
Kzo9I GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
LmnI GCTCC 5 cut(s) 105, 506, 1210, 1336, 1780
Lsp1109I GCAGC 8 cut(s) 235, 258, 289, 363, 754, 1096, 1258, 1391
LweI GCATC 7 cut(s) 168, 562, 652, 853, 912, 970, 1270
MaeI CTAG 2 cut(s) 20, 848
MaeII ACGT 2 cut(s) 784, 1572
MaeIII GTNAC 5 cut(s) 56, 199, 1369, 1389, 1454
MalI GATC 9 cut(s) 14, 336, 362, 426, 558, 600, 642, 1305, 1737
MboI GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
MboII GAAGA 3 cut(s) 135, 419, 1672
MflI RGATCY 4 cut(s) 556, 598, 1303, 1735
MhlI GDGCHC 1 cut(s) 1798
MlsI TGGCCA 1 cut(s) 126
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 6 cut(s) 79, 633, 961, 1324, 1397, 1538
MmeI TCCRAC 1 cut(s) 626
Mox20I TGGCCA 1 cut(s) 126
MroI TCCGGA 1 cut(s) 1333
MroXI GAANNNNTTC 3 cut(s) 173, 287, 835
MscI TGGCCA 1 cut(s) 126
MseI TTAA 4 cut(s) 579, 744, 885, 918
MslI CAYNNNNRTG 1 cut(s) 1050
Msp20I TGGCCA 1 cut(s) 126
MspI CCGG 2 cut(s) 1334, 1739
MspR9I CCNGG 4 cut(s) 432, 900, 1065, 1353
MvaI CCWGG 4 cut(s) 432, 900, 1065, 1353
MvnI CGCG 1 cut(s) 98
MwoI GCNNNNNNNGC 6 cut(s) 47, 72, 865, 980, 1271, 1280
NdeII GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
NlaIII CATG 2 cut(s) 763, 1009
NlaIV GGNNCC 3 cut(s) 600, 802, 1737
NmeAIII GCCGAG 1 cut(s) 751
NmuCI GTSAC 2 cut(s) 56, 1389
PaqCI CACCTGC 1 cut(s) 553
PdmI GAANNNNTTC 3 cut(s) 173, 287, 835
PfeI GAWTC 3 cut(s) 7, 724, 1235
PfoI TCCNGGA 1 cut(s) 1063
PkrI GCNGC 8 cut(s) 225, 248, 304, 353, 769, 1111, 1273, 1381
PleI GAGTC 6 cut(s) 79, 632, 960, 1324, 1396, 1538
PpsI GAGTC 6 cut(s) 79, 632, 960, 1324, 1396, 1538
PpuMI RGGWCCY 1 cut(s) 1259
Psp1406I AACGTT 1 cut(s) 1572
Psp5II RGGWCCY 1 cut(s) 1259
Psp6I CCWGG 4 cut(s) 430, 898, 1063, 1351
PspEI GGTNACC 1 cut(s) 56
PspGI CCWGG 4 cut(s) 430, 898, 1063, 1351
PspN4I GGNNCC 3 cut(s) 600, 802, 1737
PspPI GGNCC 2 cut(s) 1259, 1672
PspPPI RGGWCCY 1 cut(s) 1259
PstI CTGCAG 1 cut(s) 1276
PsuI RGATCY 4 cut(s) 556, 598, 1303, 1735
RsaI GTAC 3 cut(s) 658, 802, 1759
RsaNI GTAC 3 cut(s) 657, 801, 1758
RseI CAYNNNNRTG 1 cut(s) 1050
SaqAI TTAA 4 cut(s) 579, 744, 885, 918
SatI GCNGC 8 cut(s) 224, 247, 303, 352, 768, 1110, 1272, 1380
Sau3AI GATC 9 cut(s) 12, 334, 360, 424, 556, 598, 640, 1303, 1735
Sau96I GGNCC 2 cut(s) 1259, 1672
SchI GAGTC 6 cut(s) 79, 633, 961, 1324, 1397, 1538
ScrFI CCNGG 4 cut(s) 432, 900, 1065, 1353
SduI GDGCHC 1 cut(s) 1798
SfaNI GCATC 7 cut(s) 168, 562, 652, 853, 912, 970, 1270
SfcI CTRYAG 2 cut(s) 1272, 1430
SinI GGWCC 2 cut(s) 1259, 1672
SmiMI CAYNNNNRTG 1 cut(s) 1050
SmlI CTYRAG 2 cut(s) 1394, 1488
SmoI CTYRAG 2 cut(s) 1394, 1488
SsiI CCGC 2 cut(s) 260, 1283
SspI AATATT 2 cut(s) 675, 791
SspMI CTAG 2 cut(s) 20, 848
StyD4I CCNGG 4 cut(s) 430, 898, 1063, 1351
StyI CCWWGG 1 cut(s) 707
TaaI ACNGT 9 cut(s) 524, 880, 996, 1223, 1434, 1465, 1527, 1676, 1816
TaiI ACGT 2 cut(s) 787, 1575
TaqI TCGA 2 cut(s) 453, 1278
TfiI GAWTC 3 cut(s) 7, 724, 1235
Tru1I TTAA 4 cut(s) 579, 744, 885, 918
Tru9I TTAA 4 cut(s) 579, 744, 885, 918
TscAI CASTG 1 cut(s) 1530
TseFI GTSAC 2 cut(s) 56, 1389
TseI GCWGC 8 cut(s) 223, 246, 302, 351, 767, 1109, 1271, 1379
Tsp45I GTSAC 2 cut(s) 56, 1389
TspDTI ATGAA 2 cut(s) 218, 368
TspRI CASTG 1 cut(s) 1530
VpaK11BI GGWCC 2 cut(s) 1259, 1672
XagI CCTNNNNNAGG 1 cut(s) 1298
XapI RAATTY 1 cut(s) 701
XmnI GAANNNNTTC 3 cut(s) 173, 287, 835
XspI CTAG 2 cut(s) 20, 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.