MD06G1114200.v1.1

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
25358120 .. 25360596
2477 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1114200.v1.1.491

Sequence Viewer

Length: 1296 bp
ATGGACGAAGCTTTACAGACCAAGCCCTGCAGGTTTGGTGATCGGAAAACTAGTGACGTTGTTATATGCTTGAAGAATAGAGAAGGGATACCGAAACGGTTCTATTCCCACTCCTCTGTTCTGATAAATAGGAGCCAGTACTTTGCCAACCGGCTTTCTCATCCGAGCTGTAGTGATTGCATCAATATACATTGCTCAGAGGTTAACCACGATCACCATGTCAACCTGTTGAAGCTGCTTTATCTTCCAGCAGACTCAATTTCGGACTCGTTGGATTCTGTTAAATCTGCACTTGGTATTCTTCAGGTAGCAGTTGCCTTCCAGTGCGAAGAGATTGCACGCTGCTGCATCCAGTACTTAGAGGCTGTTCCTTGGGAGGACAAAGAAGAGGAACTTATCCTAAAAGCAGTTTCAAATTTGGGTCCAATAGCTATGCCGATATTAGCCAGGATCCAACCTGTTGATTTAGCTGCCACCAAAAACGTTTTTGTCTCAGCGGTTCGCGTTGCCACATCCATTTCCGAACCATGCCCTCCATTTGGTAACGAGCTTAAGACTTGTGCCCAAGAACAAGTTGAATTCATGTTAGGAGAAGATGACGATGCACCGTTGGTCACAGCTGATGATGAAGTAAAATCAGTGCTGAGAATGGGTCTATTGCAGATTTATTCGACGTTTGAAAAGGAGTTGTCTGCCCTACTTTTGGAGCCTGACCTTGTATCTGATAGGGCAGAGGAGAAAATATTGCATAGTTTGTCTGATCTTGAGTGGATGTTTAACATACTTGGGAAGATGGATTTGACGAAGGATTTCGTATCCAACTGGGCTGAAAGCTCAAGTAACGTTTTAGGAGTAATCGAGGATAAGAAACTAGATTCTTTTATGTGGGGTTTGAAAATCAAGCTCATAGAAGTGACTGCTAAAGTCTTGGAAGCAGTTGGCTATGGCAATGTGATTCTTCCAACTCCAATCCGCGTCTCGTTACTAAAGACATGGCTGCCTTATATAAGGAAGATGAAACCGCTCTTGGACTCAAAGGGCAGCGAGGAGACGGGCTTTCCATACAAGATGAGTGAAGACTTGTGCCAGAGCATTGAAGGGGCCATGGTGACCTTGGTGCTGGCATTGCCGTCAAATGATCAAGCGGACATTCTGGCAGACTGGATGGGAGCCGAGCAGGTCCAGTACCCGGACTTGAGCGAGGCCTTCGAGGTCTGGTGTTTTAGAACGAAGTCTGCGAAGAGAAGATTAGTGGAGGGATTGGATGGGGCTGGCAATGCAACTGTTAGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

432

Amino Acids

47.99

Weight (kDa)

4.86

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 16 - 121 3.1e-08 BTB/POZ domain
BTB-POZ_ANK-like PF25553 245 - 409 7.6e-10 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 21, 1168
AccBSI CCGCTC 1 cut(s) 1024
AccII CGCG 2 cut(s) 504, 975
AciI CCGC 4 cut(s) 497, 973, 1022, 1145
AclI AACGTT 2 cut(s) 483, 843
AclWI GGATC 2 cut(s) 445, 458
AcsI RAATTY 2 cut(s) 415, 578
AcuI CTGAAG 1 cut(s) 287
AfaI GTAC 3 cut(s) 140, 356, 1187
AfiI CCNNNNNNNGG 3 cut(s) 539, 703, 1189
AflII CTTAAG 1 cut(s) 551
AgsI TTSAA 7 cut(s) 73, 232, 414, 578, 680, 895, 1097
AhlI ACTAGT 1 cut(s) 50
AjnI CCWGG 1 cut(s) 446
AjuI GAANNNNNNNTTGG 2 cut(s) 1010, 1042
AluBI AGCT 9 cut(s) 11, 168, 235, 431, 470, 550, 620, 834, 904
AluI AGCT 9 cut(s) 11, 168, 235, 431, 470, 550, 620, 834, 904
Alw26I GTCTC 3 cut(s) 496, 982, 1043
AlwI GGATC 2 cut(s) 445, 458
AoxI GGCC 2 cut(s) 1101, 1203
ApeKI GCWGC 6 cut(s) 235, 342, 345, 470, 997, 1041
ApoI RAATTY 2 cut(s) 415, 578
Asp700I GAANNNNTTC 2 cut(s) 98, 809
AspS9I GGNCC 3 cut(s) 422, 1101, 1180
AsuC2I CCSGG 1 cut(s) 1190
AsuHPI GGTGA 3 cut(s) 50, 206, 1120
AvaII GGWCC 2 cut(s) 422, 1180
BaeGI GKGCMC 1 cut(s) 565
BamHI GGATCC 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 1083
BbvI GCAGC 6 cut(s) 222, 329, 332, 457, 984, 1053
BccI CCATC 3 cut(s) 787, 1159, 1259
BceAI ACGGC 1 cut(s) 1114
BcgI CGANNNNNNTGC 2 cut(s) 317, 351
BciT130I CCWGG 1 cut(s) 448
BciVI GTATCC 2 cut(s) 81, 826
BclI TGATCA 1 cut(s) 1138
BcnI CCSGG 1 cut(s) 1190
BcoDI GTCTC 3 cut(s) 496, 982, 1043
BcuI ACTAGT 1 cut(s) 50
BfaI CTAG 2 cut(s) 51, 872
BfmI CTRYAG 2 cut(s) 28, 169
BfrI CTTAAG 1 cut(s) 551
BfuAI ACCTGC 2 cut(s) 21, 1168
BfuI GTATCC 2 cut(s) 81, 826
BisI GCNGC 6 cut(s) 236, 343, 346, 471, 998, 1042
BlsI GCNGC 6 cut(s) 237, 344, 347, 472, 999, 1043
BmcAI AGTACT 2 cut(s) 140, 356
Bme1390I CCNGG 2 cut(s) 448, 1190
Bme18I GGWCC 2 cut(s) 422, 1180
BmgT120I GGNCC 3 cut(s) 422, 1101, 1180
BmiI GGNNCC 6 cut(s) 134, 423, 452, 708, 1102, 1171
BmrFI CCNGG 2 cut(s) 448, 1190
BmrI ACTGGG 1 cut(s) 832
BmsI GCATC 3 cut(s) 189, 357, 592
BmuI ACTGGG 1 cut(s) 832
BpiI GAAGAC 1 cut(s) 1083
BpuEI CTTGAG 3 cut(s) 785, 820, 1216
BpuMI CCSGG 1 cut(s) 1190
BsaJI CCNNGG 3 cut(s) 371, 1104, 1113
Bsc4I CCNNNNNNNGG 3 cut(s) 539, 703, 1189
Bse118I RCCGGY 1 cut(s) 150
Bse1I ACTGG 6 cut(s) 136, 322, 352, 827, 1166, 1183
Bse3DI GCAATG 4 cut(s) 190, 955, 1124, 1282
BseBI CCWGG 1 cut(s) 448
BseDI CCNNGG 3 cut(s) 371, 1104, 1113
BseGI GGATG 6 cut(s) 160, 348, 512, 777, 1170, 1270
BseLI CCNNNNNNNGG 3 cut(s) 539, 703, 1189
BseMI GCAATG 4 cut(s) 190, 955, 1124, 1282
BseMII CTCAG 3 cut(s) 210, 507, 635
BseNI ACTGG 6 cut(s) 136, 322, 352, 827, 1166, 1183
BseRI GAGGAG 3 cut(s) 103, 749, 1061
BseSI GKGCMC 1 cut(s) 565
BseXI GCAGC 6 cut(s) 222, 329, 332, 457, 984, 1053
BsgI GTGCAG 1 cut(s) 273
Bsh1236I CGCG 2 cut(s) 504, 975
BshFI GGCC 2 cut(s) 1103, 1205
BsiSI CCGG 2 cut(s) 151, 1190
BslI CCNNNNNNNGG 3 cut(s) 539, 703, 1189
BsmAI GTCTC 3 cut(s) 496, 982, 1043
BsmBI CGTCTC 2 cut(s) 982, 1043
BsnI GGCC 2 cut(s) 1103, 1205
Bsp1286I GDGCHC 1 cut(s) 565
Bsp143I GATC 5 cut(s) 40, 211, 450, 760, 1138
Bsp19I CCATGG 1 cut(s) 1104
BspACI CCGC 4 cut(s) 497, 973, 1022, 1145
BspANI GGCC 2 cut(s) 1103, 1205
BspCNI CTCAG 3 cut(s) 209, 506, 636
BspFNI CGCG 2 cut(s) 504, 975
BspLI GGNNCC 6 cut(s) 134, 423, 452, 708, 1102, 1171
BspMAI CTGCAG 1 cut(s) 32
BspMI ACCTGC 2 cut(s) 21, 1168
BspPI GGATC 2 cut(s) 445, 458
BspTI CTTAAG 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 1024
BsrDI GCAATG 4 cut(s) 190, 955, 1124, 1282
BsrFI RCCGGY 1 cut(s) 150
BsrI ACTGG 6 cut(s) 136, 322, 352, 827, 1166, 1183
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 3 cut(s) 371, 1104, 1113
BssMI GATC 5 cut(s) 40, 211, 450, 760, 1138
BssT1I CCWWGG 3 cut(s) 371, 1104, 1113
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 3 cut(s) 99, 609, 1285
Bst6I CTCTTC 3 cut(s) 324, 381, 1235
BstAFI CTTAAG 1 cut(s) 551
BstC8I GCNNGC 3 cut(s) 340, 1122, 1273
BstDEI CTNAG 4 cut(s) 196, 358, 493, 644
BstDSI CCRYGG 1 cut(s) 1104
BstEII GGTNACC 1 cut(s) 1108
BstF5I GGATG 6 cut(s) 160, 348, 512, 777, 1170, 1270
BstFNI CGCG 2 cut(s) 504, 975
BstKTI GATC 5 cut(s) 43, 214, 453, 763, 1141
BstMAI GTCTC 3 cut(s) 496, 982, 1043
BstMBI GATC 5 cut(s) 40, 211, 450, 760, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 1126, 1277
BstNI CCWGG 1 cut(s) 448
BstPI GGTNACC 1 cut(s) 1108
BstSCI CCNGG 2 cut(s) 446, 1188
BstSFI CTRYAG 2 cut(s) 28, 169
BstSLI GKGCMC 1 cut(s) 565
BstUI CGCG 2 cut(s) 504, 975
BstV1I GCAGC 6 cut(s) 222, 329, 332, 457, 984, 1053
BstV2I GAAGAC 1 cut(s) 1083
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BsuI GTATCC 2 cut(s) 81, 826
BsuRI GGCC 2 cut(s) 1103, 1205
BtgI CCRYGG 1 cut(s) 1104
BtsCI GGATG 6 cut(s) 160, 348, 512, 777, 1170, 1270
BtsIMutI CAGTG 2 cut(s) 329, 645
BveI ACCTGC 2 cut(s) 21, 1168
Cac8I GCNNGC 3 cut(s) 340, 1122, 1273
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 3 cut(s) 422, 1101, 1180
CseI GACGC 1 cut(s) 964
Csp6I GTAC 3 cut(s) 139, 355, 1186
CviAII CATG 5 cut(s) 218, 528, 583, 993, 1105
CviQI GTAC 3 cut(s) 139, 355, 1186
DdeI CTNAG 4 cut(s) 196, 358, 493, 644
DpnI GATC 5 cut(s) 42, 213, 452, 762, 1140
DpnII GATC 5 cut(s) 40, 211, 450, 760, 1138
Eam1104I CTCTTC 3 cut(s) 324, 381, 1235
EarI CTCTTC 3 cut(s) 324, 381, 1235
Eco130I CCWWGG 3 cut(s) 371, 1104, 1113
Eco147I AGGCCT 1 cut(s) 1205
Eco47I GGWCC 2 cut(s) 422, 1180
Eco57I CTGAAG 1 cut(s) 287
Eco91I GGTNACC 1 cut(s) 1108
EcoO65I GGTNACC 1 cut(s) 1108
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 1 cut(s) 446
EcoT14I CCWWGG 3 cut(s) 371, 1104, 1113
ErhI CCWWGG 3 cut(s) 371, 1104, 1113
Esp3I CGTCTC 2 cut(s) 982, 1043
FaeI CATG 5 cut(s) 221, 531, 586, 996, 1108
FalI AAGNNNNNCTT 2 cut(s) 378, 410
FatI CATG 5 cut(s) 217, 527, 582, 992, 1104
FbaI TGATCA 1 cut(s) 1138
Fnu4HI GCNGC 6 cut(s) 236, 343, 346, 471, 998, 1042
FokI GGATG 6 cut(s) 147, 335, 499, 784, 1177, 1277
Fsp4HI GCNGC 6 cut(s) 236, 343, 346, 471, 998, 1042
FspBI CTAG 2 cut(s) 51, 872
GluI GCNGC 6 cut(s) 236, 343, 346, 471, 998, 1042
HaeIII GGCC 2 cut(s) 1103, 1205
HapII CCGG 2 cut(s) 151, 1190
HgaI GACGC 1 cut(s) 964
Hin1II CATG 5 cut(s) 221, 531, 586, 996, 1108
HincII GTYRAC 2 cut(s) 205, 223
HindII GTYRAC 2 cut(s) 205, 223
HindIII AAGCTT 1 cut(s) 9
HinfI GANTC 6 cut(s) 254, 266, 275, 875, 955, 1031
HpaI GTTAAC 1 cut(s) 205
HpaII CCGG 2 cut(s) 151, 1190
HphI GGTGA 3 cut(s) 50, 206, 1120
Hpy166II GTNNAC 2 cut(s) 205, 223
Hpy188I TCNGA 8 cut(s) 45, 123, 165, 199, 265, 523, 724, 760
Hpy188III TCNNGA 1 cut(s) 764
Hpy8I GTNNAC 2 cut(s) 205, 223
Hpy99I CGWCG 1 cut(s) 676
HpyAV CCTTC 5 cut(s) 77, 328, 799, 1091, 1216
HpyCH4III ACNGT 3 cut(s) 99, 609, 1285
HpyCH4IV ACGT 4 cut(s) 57, 483, 674, 843
HpyCH4V TGCA 9 cut(s) 30, 180, 290, 338, 348, 605, 661, 748, 1280
HpyF10VI GCNNNNNNNGC 2 cut(s) 1126, 1277
HpyF3I CTNAG 4 cut(s) 196, 358, 493, 644
HpySE526I ACGT 4 cut(s) 57, 483, 674, 843
Hsp92II CATG 5 cut(s) 221, 531, 586, 996, 1108
Ksp22I TGATCA 1 cut(s) 1138
KspAI GTTAAC 1 cut(s) 205
Kzo9I GATC 5 cut(s) 40, 211, 450, 760, 1138
LmnI GCTCC 3 cut(s) 132, 706, 1169
Lsp1109I GCAGC 6 cut(s) 222, 329, 332, 457, 984, 1053
LweI GCATC 3 cut(s) 189, 357, 592
MaeI CTAG 2 cut(s) 51, 872
MaeII ACGT 4 cut(s) 57, 483, 674, 843
MaeIII GTNAC 7 cut(s) 53, 542, 613, 839, 913, 981, 1108
MalI GATC 5 cut(s) 42, 213, 452, 762, 1140
MbiI CCGCTC 1 cut(s) 1024
MboI GATC 5 cut(s) 40, 211, 450, 760, 1138
MflI RGATCY 1 cut(s) 450
MhlI GDGCHC 1 cut(s) 565
MluCI AATT 3 cut(s) 258, 415, 578
MlyI GAGTC 3 cut(s) 248, 260, 1025
MmeI TCCRAC 4 cut(s) 252, 478, 843, 986
MroXI GAANNNNTTC 2 cut(s) 98, 809
MseI TTAA 4 cut(s) 204, 282, 552, 777
MslI CAYNNNNRTG 1 cut(s) 911
MspA1I CMGCKG 2 cut(s) 497, 620
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 2 cut(s) 151, 1190
MspR9I CCNGG 2 cut(s) 448, 1190
MvaI CCWGG 1 cut(s) 448
MvnI CGCG 2 cut(s) 504, 975
MwoI GCNNNNNNNGC 2 cut(s) 1126, 1277
NciI CCSGG 1 cut(s) 1190
NcoI CCATGG 1 cut(s) 1104
NdeII GATC 5 cut(s) 40, 211, 450, 760, 1138
NlaIII CATG 5 cut(s) 221, 531, 586, 996, 1108
NlaIV GGNNCC 6 cut(s) 134, 423, 452, 708, 1102, 1171
NmeAIII GCCGAG 1 cut(s) 1198
NmuCI GTSAC 4 cut(s) 53, 613, 913, 1108
PceI AGGCCT 1 cut(s) 1205
PcsI WCGNNNNNNNCGW 1 cut(s) 1235
PdmI GAANNNNTTC 2 cut(s) 98, 809
PfeI GAWTC 3 cut(s) 275, 875, 955
PkrI GCNGC 6 cut(s) 237, 344, 347, 472, 999, 1043
PleI GAGTC 3 cut(s) 248, 260, 1025
PpsI GAGTC 3 cut(s) 248, 260, 1025
Psp1406I AACGTT 2 cut(s) 483, 843
Psp6I CCWGG 1 cut(s) 446
PspEI GGTNACC 1 cut(s) 1108
PspGI CCWGG 1 cut(s) 446
PspN4I GGNNCC 6 cut(s) 134, 423, 452, 708, 1102, 1171
PspPI GGNCC 3 cut(s) 422, 1101, 1180
PstI CTGCAG 1 cut(s) 32
PsuI RGATCY 1 cut(s) 450
PvuII CAGCTG 1 cut(s) 620
RsaI GTAC 3 cut(s) 140, 356, 1187
RsaNI GTAC 3 cut(s) 139, 355, 1186
RseI CAYNNNNRTG 1 cut(s) 911
SaqAI TTAA 4 cut(s) 204, 282, 552, 777
SatI GCNGC 6 cut(s) 236, 343, 346, 471, 998, 1042
Sau3AI GATC 5 cut(s) 40, 211, 450, 760, 1138
Sau96I GGNCC 3 cut(s) 422, 1101, 1180
SbfI CCTGCAGG 1 cut(s) 32
ScaI AGTACT 2 cut(s) 140, 356
SchI GAGTC 3 cut(s) 248, 260, 1025
ScrFI CCNGG 2 cut(s) 448, 1190
SdaI CCTGCAGG 1 cut(s) 32
SduI GDGCHC 1 cut(s) 565
SfaNI GCATC 3 cut(s) 189, 357, 592
SfcI CTRYAG 2 cut(s) 28, 169
SinI GGWCC 2 cut(s) 422, 1180
SmiMI CAYNNNNRTG 1 cut(s) 911
SmlI CTYRAG 4 cut(s) 551, 764, 835, 1195
SmoI CTYRAG 4 cut(s) 551, 764, 835, 1195
SpeI ACTAGT 1 cut(s) 50
Sse8387I CCTGCAGG 1 cut(s) 32
Sse9I AATT 3 cut(s) 258, 415, 578
SseBI AGGCCT 1 cut(s) 1205
SsiI CCGC 4 cut(s) 497, 973, 1022, 1145
SspI AATATT 1 cut(s) 744
SspMI CTAG 2 cut(s) 51, 872
StuI AGGCCT 1 cut(s) 1205
StyD4I CCNGG 2 cut(s) 446, 1188
StyI CCWWGG 3 cut(s) 371, 1104, 1113
TaaI ACNGT 3 cut(s) 99, 609, 1285
TaiI ACGT 4 cut(s) 60, 486, 677, 846
TaqI TCGA 3 cut(s) 671, 858, 1209
TasI AATT 3 cut(s) 258, 415, 578
TatI WGTACW 2 cut(s) 138, 354
TfiI GAWTC 3 cut(s) 275, 875, 955
Tru1I TTAA 4 cut(s) 204, 282, 552, 777
Tru9I TTAA 4 cut(s) 204, 282, 552, 777
TscAI CASTG 2 cut(s) 329, 645
TseFI GTSAC 4 cut(s) 53, 613, 913, 1108
TseI GCWGC 6 cut(s) 235, 342, 345, 470, 997, 1041
Tsp45I GTSAC 4 cut(s) 53, 613, 913, 1108
TspDTI ATGAA 3 cut(s) 571, 642, 1031
TspRI CASTG 2 cut(s) 329, 645
Vha464I CTTAAG 1 cut(s) 551
VpaK11BI GGWCC 2 cut(s) 422, 1180
XapI RAATTY 2 cut(s) 415, 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 1111
XmnI GAANNNNTTC 2 cut(s) 98, 809
XspI CTAG 2 cut(s) 51, 872
ZrmI AGTACT 2 cut(s) 140, 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.