MD14G1135500.v1.1

BTB POZ domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
21516234 .. 21518663
2430 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1135500.v1.1.491

Sequence Viewer

Length: 1299 bp
ATGGACAAAGCTTTACAGACCAAGCCCTGCAGATTTGGTGATCGAAAAAACAGTGATGTTGTTATATGTTTGAAGAATAGAGAAGGAACACCGAAACGGTTCTGTTCCCACTCCTTGGTTCTGATAAATAGGAGCAAGTACTTCGCCAACCGGCTATCTCACCCGAGCTCTAGTGATTGCATTAATATACATTGCTCAGAGGTTAACTATGATCACCATGTCAACCTGTTGAAGCTGCTTTATCTTCCAGCAGACTCAATTTTGGACTCGTTCGACTCTGTTAAATCTGCACTTGGTATTCTTCAGGTAGCAGTTGCCTTCCAGTGCGAAGAGATTGCGCGGTGCTGCATCCAGTACTTGGAAGCTGTTCCTTGGGAGGACAAAGAAGAGGAACTTATTCTAAAAGCAGTTTCAAAATTGGGTTCAATAGCAATGCCGATATTAGCCAGGATCCAACCTGTTGATTTAGCTGCCACCAAAAACGTTTTTGTATCAGCAGTTCGCGTTGCCACATCCATTTCTGGACCATGTCCTCCATTCGGTAACGAGCTTAAAACTTCCGCGCAAGAACAAGTTGAATTCATGCTAGGTGATGATGAGGATGCACCGTTGGTCACAGCTGACGATGAAGTAAAATCAGTGTTGAGAATGGGTCTATTGCAGATTTATTCGACGTTTGAAAAGGAGTTGTCTGCCCTACTTTTGGAGCCCGACCTTGTATCTGACAGGGCAGAGGAGAAAATATTGCATAGTTTATCTGATCTCGAGTGGATGTGTAACATACTCGGGAAGATGGATTTGATGAAGGATTTCGTATCCAACTGGGCTGAAAGCTCGAGCAACGTTTTAGGAGTAGTCGAGGATAAAAAACTTGATTCTTTTATGTGGGGTTTGAAAATTAAGCTAATAGAAGTAACTGCTAAAGTCTTGGAAGCAGTTGGCTATGGCAATGTGATTCTTCCAACTCCAATCCGCGCCTCGTTACTAAAGACATGGCTGCCTTATATAAGGAAGATGAAGCCCCTCTTGGATTCAAAGGGTAGCGAGGGAACAGGTTTTCCATACAAGATGAGCGAAGACTTGTGCCAGAGCATTGAAGGGGCCATGGTGACGTTGGTGCTGGCATTGCCTTCGAATGATCAAGCGGACATTCTGGCGGACTGGATGGGAGCCGAGCAGGTCAGGTATCCAGACTTGAGCGAGGCGTTTGAGGTGTGGTGTTTTAGAACCAAGTCTGCAAAGAGAAGATTAGTGGAGGGATTGGATGGGGCGGCTGGCAATGCAACTGTGAGCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

433

Amino Acids

47.91

Weight (kDa)

5.12

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 16 - 121 1.8e-07 BTB/POZ domain
BTB-POZ_ANK-like PF25553 245 - 409 7.8e-09 BTB/POZ Ankyrin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1168
AccB7I CCANNNNNTGG 2 cut(s) 115, 358
AccII CGCG 4 cut(s) 340, 504, 563, 975
AciI CCGC 6 cut(s) 340, 561, 973, 1145, 1157, 1271
AclI AACGTT 2 cut(s) 483, 843
AclWI GGATC 2 cut(s) 445, 458
AcsI RAATTY 1 cut(s) 578
AcuI CTGAAG 1 cut(s) 287
AfaI GTAC 2 cut(s) 140, 356
AfiI CCNNNNNNNGG 4 cut(s) 115, 358, 539, 703
AgsI TTSAA 9 cut(s) 73, 232, 414, 426, 578, 680, 895, 1035, 1097
AjnI CCWGG 1 cut(s) 446
AjuI GAANNNNNNNTTGG 2 cut(s) 1010, 1042
AloI GAACNNNNNNTCC 2 cut(s) 1042, 1074
AluBI AGCT 9 cut(s) 11, 168, 235, 365, 470, 550, 620, 834, 904
AluI AGCT 9 cut(s) 11, 168, 235, 365, 470, 550, 620, 834, 904
Alw21I GWGCWC 1 cut(s) 170
AlwI GGATC 2 cut(s) 445, 458
Ama87I CYCGRG 4 cut(s) 163, 764, 785, 835
AoxI GGCC 1 cut(s) 1101
ApeKI GCWGC 4 cut(s) 235, 345, 470, 997
ApoI RAATTY 1 cut(s) 578
AseI ATTAAT 1 cut(s) 183
Asp700I GAANNNNTTC 4 cut(s) 98, 366, 396, 809
AspLEI GCGC 3 cut(s) 340, 565, 977
AspS9I GGNCC 2 cut(s) 524, 1101
AsuHPI GGTGA 5 cut(s) 50, 152, 206, 602, 1120
AsuII TTCGAA 1 cut(s) 1133
AvaI CYCGRG 4 cut(s) 163, 764, 785, 835
AvaII GGWCC 1 cut(s) 524
BamHI GGATCC 1 cut(s) 450
BanII GRGCYC 2 cut(s) 170, 711
BbsI GAAGAC 1 cut(s) 1083
Bbv12I GWGCWC 1 cut(s) 170
BbvI GCAGC 4 cut(s) 222, 332, 457, 984
BccI CCATC 3 cut(s) 787, 1159, 1259
BcgI CGANNNNNNTGC 6 cut(s) 124, 158, 317, 351, 1113, 1147
BciT130I CCWGG 1 cut(s) 448
BciVI GTATCC 2 cut(s) 826, 1197
BclI TGATCA 2 cut(s) 211, 1138
BfaI CTAG 2 cut(s) 171, 587
BfmI CTRYAG 1 cut(s) 28
BfuAI ACCTGC 1 cut(s) 1168
BfuI GTATCC 2 cut(s) 826, 1197
BisI GCNGC 5 cut(s) 236, 346, 471, 998, 1272
BlsI GCNGC 5 cut(s) 237, 347, 472, 999, 1273
BmcAI AGTACT 2 cut(s) 140, 356
Bme1390I CCNGG 1 cut(s) 448
Bme18I GGWCC 1 cut(s) 524
BmeT110I CYCGRG 4 cut(s) 163, 764, 785, 835
BmgT120I GGNCC 2 cut(s) 524, 1101
BmiI GGNNCC 4 cut(s) 452, 708, 1102, 1171
BmrFI CCNGG 1 cut(s) 448
BmrI ACTGGG 1 cut(s) 832
BmsI GCATC 2 cut(s) 357, 592
BmuI ACTGGG 1 cut(s) 832
BpiI GAAGAC 1 cut(s) 1083
Bpu14I TTCGAA 1 cut(s) 1133
BpuEI CTTGAG 1 cut(s) 1216
BsaJI CCNNGG 3 cut(s) 114, 371, 1104
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 358, 539, 703
Bse118I RCCGGY 1 cut(s) 150
Bse1I ACTGG 4 cut(s) 322, 352, 827, 1166
Bse3DI GCAATG 5 cut(s) 190, 438, 955, 1124, 1285
BseBI CCWGG 1 cut(s) 448
BseDI CCNNGG 3 cut(s) 114, 371, 1104
BseGI GGATG 6 cut(s) 348, 512, 607, 777, 1170, 1270
BseLI CCNNNNNNNGG 4 cut(s) 115, 358, 539, 703
BseMI GCAATG 5 cut(s) 190, 438, 955, 1124, 1285
BseMII CTCAG 1 cut(s) 210
BseNI ACTGG 4 cut(s) 322, 352, 827, 1166
BseRI GAGGAG 1 cut(s) 749
BseXI GCAGC 4 cut(s) 222, 332, 457, 984
BsgI GTGCAG 1 cut(s) 273
Bsh1236I CGCG 4 cut(s) 340, 504, 563, 975
BshFI GGCC 1 cut(s) 1103
BsiHKAI GWGCWC 1 cut(s) 170
BsiHKCI CYCGRG 4 cut(s) 163, 764, 785, 835
BsiSI CCGG 1 cut(s) 151
BslI CCNNNNNNNGG 4 cut(s) 115, 358, 539, 703
BsnI GGCC 1 cut(s) 1103
BsoBI CYCGRG 4 cut(s) 163, 764, 785, 835
Bsp119I TTCGAA 1 cut(s) 1133
Bsp1286I GDGCHC 2 cut(s) 170, 711
Bsp143I GATC 5 cut(s) 40, 211, 450, 760, 1138
Bsp19I CCATGG 1 cut(s) 1104
BspACI CCGC 6 cut(s) 340, 561, 973, 1145, 1157, 1271
BspANI GGCC 1 cut(s) 1103
BspCNI CTCAG 1 cut(s) 209
BspFNI CGCG 4 cut(s) 340, 504, 563, 975
BspLI GGNNCC 4 cut(s) 452, 708, 1102, 1171
BspMAI CTGCAG 1 cut(s) 32
BspMI ACCTGC 1 cut(s) 1168
BspPI GGATC 2 cut(s) 445, 458
BspT104I TTCGAA 1 cut(s) 1133
BsrDI GCAATG 5 cut(s) 190, 438, 955, 1124, 1285
BsrFI RCCGGY 1 cut(s) 150
BsrI ACTGG 4 cut(s) 322, 352, 827, 1166
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 3 cut(s) 114, 371, 1104
BssMI GATC 5 cut(s) 40, 211, 450, 760, 1138
BssT1I CCWWGG 3 cut(s) 114, 371, 1104
Bst2UI CCWGG 1 cut(s) 448
Bst4CI ACNGT 4 cut(s) 53, 99, 609, 1288
Bst6I CTCTTC 2 cut(s) 324, 381
BstBI TTCGAA 1 cut(s) 1133
BstC8I GCNNGC 2 cut(s) 1122, 1276
BstDEI CTNAG 1 cut(s) 196
BstDSI CCRYGG 1 cut(s) 1104
BstF5I GGATG 6 cut(s) 348, 512, 607, 777, 1170, 1270
BstFNI CGCG 4 cut(s) 340, 504, 563, 975
BstHHI GCGC 3 cut(s) 340, 565, 977
BstKTI GATC 5 cut(s) 43, 214, 453, 763, 1141
BstMBI GATC 5 cut(s) 40, 211, 450, 760, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 1126, 1280
BstNI CCWGG 1 cut(s) 448
BstSCI CCNGG 1 cut(s) 446
BstSFI CTRYAG 1 cut(s) 28
BstUI CGCG 4 cut(s) 340, 504, 563, 975
BstV1I GCAGC 4 cut(s) 222, 332, 457, 984
BstV2I GAAGAC 1 cut(s) 1083
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BsuI GTATCC 2 cut(s) 826, 1197
BsuRI GGCC 1 cut(s) 1103
BtgI CCRYGG 1 cut(s) 1104
BtsCI GGATG 6 cut(s) 348, 512, 607, 777, 1170, 1270
BtsIMutI CAGTG 3 cut(s) 58, 329, 645
BveI ACCTGC 1 cut(s) 1168
Cac8I GCNNGC 2 cut(s) 1122, 1276
CfoI GCGC 3 cut(s) 340, 565, 977
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 2 cut(s) 524, 1101
Csp6I GTAC 2 cut(s) 139, 355
CviAII CATG 5 cut(s) 218, 528, 583, 993, 1105
CviQI GTAC 2 cut(s) 139, 355
DdeI CTNAG 1 cut(s) 196
DpnI GATC 5 cut(s) 42, 213, 452, 762, 1140
DpnII GATC 5 cut(s) 40, 211, 450, 760, 1138
Eam1104I CTCTTC 2 cut(s) 324, 381
EarI CTCTTC 2 cut(s) 324, 381
EciI GGCGGA 1 cut(s) 1172
Ecl136II GAGCTC 1 cut(s) 168
Eco130I CCWWGG 3 cut(s) 114, 371, 1104
Eco24I GRGCYC 2 cut(s) 170, 711
Eco47I GGWCC 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 168
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 4 cut(s) 163, 764, 785, 835
EcoICRI GAGCTC 1 cut(s) 168
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 1 cut(s) 446
EcoT14I CCWWGG 3 cut(s) 114, 371, 1104
EcoT38I GRGCYC 2 cut(s) 170, 711
ErhI CCWWGG 3 cut(s) 114, 371, 1104
FaeI CATG 5 cut(s) 221, 531, 586, 996, 1108
FalI AAGNNNNNCTT 4 cut(s) 378, 410, 1010, 1042
FatI CATG 5 cut(s) 217, 527, 582, 992, 1104
FbaI TGATCA 2 cut(s) 211, 1138
Fnu4HI GCNGC 5 cut(s) 236, 346, 471, 998, 1272
FokI GGATG 6 cut(s) 335, 499, 614, 784, 1177, 1277
FriOI GRGCYC 2 cut(s) 170, 711
Fsp4HI GCNGC 5 cut(s) 236, 346, 471, 998, 1272
FspBI CTAG 2 cut(s) 171, 587
GlaI GCGC 3 cut(s) 339, 564, 976
GluI GCNGC 5 cut(s) 236, 346, 471, 998, 1272
HaeIII GGCC 1 cut(s) 1103
HapII CCGG 1 cut(s) 151
HhaI GCGC 3 cut(s) 340, 565, 977
Hin1II CATG 5 cut(s) 221, 531, 586, 996, 1108
Hin6I GCGC 3 cut(s) 338, 563, 975
HinP1I GCGC 3 cut(s) 338, 563, 975
HincII GTYRAC 2 cut(s) 205, 223
HindII GTYRAC 2 cut(s) 205, 223
HindIII AAGCTT 1 cut(s) 9
HinfI GANTC 6 cut(s) 254, 266, 275, 875, 955, 1031
HpaI GTTAAC 1 cut(s) 205
HpaII CCGG 1 cut(s) 151
HphI GGTGA 5 cut(s) 50, 152, 206, 602, 1120
Hpy166II GTNNAC 2 cut(s) 205, 223
Hpy188I TCNGA 5 cut(s) 123, 199, 724, 760, 1298
Hpy188III TCNNGA 4 cut(s) 522, 764, 787, 1190
Hpy8I GTNNAC 2 cut(s) 205, 223
Hpy99I CGWCG 1 cut(s) 676
HpyAV CCTTC 5 cut(s) 77, 328, 799, 1091, 1140
HpyCH4III ACNGT 4 cut(s) 53, 99, 609, 1288
HpyCH4IV ACGT 4 cut(s) 483, 674, 843, 1112
HpyCH4V TGCA 9 cut(s) 30, 180, 290, 348, 605, 661, 748, 1238, 1283
HpyF10VI GCNNNNNNNGC 2 cut(s) 1126, 1280
HpyF3I CTNAG 1 cut(s) 196
HpySE526I ACGT 4 cut(s) 483, 674, 843, 1112
Hsp92II CATG 5 cut(s) 221, 531, 586, 996, 1108
HspAI GCGC 3 cut(s) 338, 563, 975
Ksp22I TGATCA 2 cut(s) 211, 1138
KspAI GTTAAC 1 cut(s) 205
Kzo9I GATC 5 cut(s) 40, 211, 450, 760, 1138
LmnI GCTCC 3 cut(s) 132, 706, 1169
Lsp1109I GCAGC 4 cut(s) 222, 332, 457, 984
LweI GCATC 2 cut(s) 357, 592
MaeI CTAG 2 cut(s) 171, 587
MaeII ACGT 4 cut(s) 483, 674, 843, 1112
MaeIII GTNAC 6 cut(s) 542, 613, 776, 913, 981, 1108
MalI GATC 5 cut(s) 42, 213, 452, 762, 1140
MboI GATC 5 cut(s) 40, 211, 450, 760, 1138
MflI RGATCY 1 cut(s) 450
MhlI GDGCHC 2 cut(s) 170, 711
MluCI AATT 4 cut(s) 258, 416, 578, 897
MlyI GAGTC 3 cut(s) 248, 260, 269
MmeI TCCRAC 3 cut(s) 478, 843, 986
MroXI GAANNNNTTC 4 cut(s) 98, 366, 396, 809
MseI TTAA 5 cut(s) 183, 204, 282, 552, 900
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 1 cut(s) 151
MspR9I CCNGG 1 cut(s) 448
MvaI CCWGG 1 cut(s) 448
MvnI CGCG 4 cut(s) 340, 504, 563, 975
MwoI GCNNNNNNNGC 2 cut(s) 1126, 1280
NcoI CCATGG 1 cut(s) 1104
NdeII GATC 5 cut(s) 40, 211, 450, 760, 1138
NlaIII CATG 5 cut(s) 221, 531, 586, 996, 1108
NlaIV GGNNCC 4 cut(s) 452, 708, 1102, 1171
NmeAIII GCCGAG 1 cut(s) 1198
NmuCI GTSAC 2 cut(s) 613, 1108
NspV TTCGAA 1 cut(s) 1133
PaeR7I CTCGAG 2 cut(s) 764, 835
PdmI GAANNNNTTC 4 cut(s) 98, 366, 396, 809
PfeI GAWTC 3 cut(s) 875, 955, 1031
PflFI GACNNNGTC 1 cut(s) 528
PflMI CCANNNNNTGG 2 cut(s) 115, 358
PkrI GCNGC 5 cut(s) 237, 347, 472, 999, 1273
PleI GAGTC 3 cut(s) 248, 260, 269
PpsI GAGTC 3 cut(s) 248, 260, 269
PshBI ATTAAT 1 cut(s) 183
Psp124BI GAGCTC 1 cut(s) 170
Psp1406I AACGTT 2 cut(s) 483, 843
Psp6I CCWGG 1 cut(s) 446
PspGI CCWGG 1 cut(s) 446
PspN4I GGNNCC 4 cut(s) 452, 708, 1102, 1171
PspPI GGNCC 2 cut(s) 524, 1101
PspXI VCTCGAGB 1 cut(s) 835
PsrI GAACNNNNNNTAC 2 cut(s) 483, 515
PstI CTGCAG 1 cut(s) 32
PsuI RGATCY 1 cut(s) 450
PsyI GACNNNGTC 1 cut(s) 528
PvuII CAGCTG 1 cut(s) 620
RsaI GTAC 2 cut(s) 140, 356
RsaNI GTAC 2 cut(s) 139, 355
SacI GAGCTC 1 cut(s) 170
SaqAI TTAA 5 cut(s) 183, 204, 282, 552, 900
SatI GCNGC 5 cut(s) 236, 346, 471, 998, 1272
Sau3AI GATC 5 cut(s) 40, 211, 450, 760, 1138
Sau96I GGNCC 2 cut(s) 524, 1101
ScaI AGTACT 2 cut(s) 140, 356
SchI GAGTC 3 cut(s) 248, 260, 269
ScrFI CCNGG 1 cut(s) 448
SduI GDGCHC 2 cut(s) 170, 711
SfaNI GCATC 2 cut(s) 357, 592
SfcI CTRYAG 1 cut(s) 28
Sfr274I CTCGAG 2 cut(s) 764, 835
SfuI TTCGAA 1 cut(s) 1133
SinI GGWCC 1 cut(s) 524
SlaI CTCGAG 2 cut(s) 764, 835
SmlI CTYRAG 3 cut(s) 764, 835, 1195
SmoI CTYRAG 3 cut(s) 764, 835, 1195
Sse9I AATT 4 cut(s) 258, 416, 578, 897
SsiI CCGC 6 cut(s) 340, 561, 973, 1145, 1157, 1271
SspI AATATT 1 cut(s) 744
SspMI CTAG 2 cut(s) 171, 587
SstI GAGCTC 1 cut(s) 170
StyD4I CCNGG 1 cut(s) 446
StyI CCWWGG 3 cut(s) 114, 371, 1104
TaaI ACNGT 4 cut(s) 53, 99, 609, 1288
TaiI ACGT 4 cut(s) 486, 677, 846, 1115
TaqI TCGA 7 cut(s) 43, 273, 671, 765, 836, 858, 1133
TasI AATT 4 cut(s) 258, 416, 578, 897
TatI WGTACW 2 cut(s) 138, 354
TauI GCSGC 1 cut(s) 1274
TfiI GAWTC 3 cut(s) 875, 955, 1031
Tru1I TTAA 5 cut(s) 183, 204, 282, 552, 900
Tru9I TTAA 5 cut(s) 183, 204, 282, 552, 900
TscAI CASTG 3 cut(s) 58, 329, 645
TseFI GTSAC 2 cut(s) 613, 1108
TseI GCWGC 4 cut(s) 235, 345, 470, 997
Tsp45I GTSAC 2 cut(s) 613, 1108
TspDTI ATGAA 4 cut(s) 571, 642, 818, 1031
TspRI CASTG 3 cut(s) 58, 329, 645
Tth111I GACNNNGTC 1 cut(s) 528
Van91I CCANNNNNTGG 2 cut(s) 115, 358
VpaK11BI GGWCC 1 cut(s) 524
VspI ATTAAT 1 cut(s) 183
XapI RAATTY 1 cut(s) 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 1111
XhoI CTCGAG 2 cut(s) 764, 835
XmnI GAANNNNTTC 4 cut(s) 98, 366, 396, 809
XspI CTAG 2 cut(s) 171, 587
ZrmI AGTACT 2 cut(s) 140, 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.