Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0006405

Physical Location & Seq

Genomic Coordinates Forward (+)

59738910 .. 59741191

Gene Structure 2282 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0474700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGAGTTTCTACCCTATGATCTCTTTGTTAGTTTGTACGCTACTGCAAATCACCAATGCAGTTTCAAATGCTGAGGAATCCCAATCATACATCATTCACATGGATCGTTCCCAAAAACCTTCGTCTTTTTTGACTCACGAGGCTTGGCACAGATCAAGAGAACGAAATGTTGTTGTACTCATACAACCATGTCATGCACGGTTTCAGTGCCAGGCTTACAGCTTCTCAACTGTCCGAATTGGGTCTCCGGCTCATGTTGCCACGTATCCGGAGTCTTTTGGTAAGCTCTTGACAACACACAGCTCCAAGTTTCTAGGACTGAGACGGAACTCAGGCTTATTGCTTGCGTCCTCGTCTGGCCAAGATGTGATCATAGGAATCATAGATACCGGAGTTTGGCCAGAGAGCGAGAGTTTCGGTGATAGGGGAATGTCTGAAGTGCCAAAAAGATGGAAAGGCACTTGCGAGAATGGAACATATTTCAGCCCATCTCTCTGCAACAACAAGCTCATTGGGGCTCGATCCTTTAGCAAAGGCCTGAAAGCAGCAGGAATTAAAATATCCACAAAAAATGACTTCGATTCACCACGGGACTGGTTTGGTCATGGAAGTCACACTTCGTCAACAGCTGCAGGTAACCATGTACCCGGCGCAAGTCATTTCGGATATGCAAAAGGCACGGCAAGAGGGGTGGCGCCACGAGCCCATGTTGCCATGTACAAGGTCGCCTGGGCAACAGACTCGGAAAAGAGTTTCGCTAGTGATGTGCTTGCAGGCATGGACCATGCAATTTCTGATGGTGTTGATATAATGTCACTGTCTCTTGGCATTGACTTCCTTCCTTATTTCAACGATGTCATTGCCATTGCTTCTCTTTCTGCAATCGAACAAGGAATTGTTGTGGTCTGTGCTGCTGGAAATGACGGGAAATACAGTACAACATACAATGGAGCACCCTGGATCACAACAGTAGGAGCCGGAACTCTTGATCGCACCTTCACTGCAACACTGACTCTAGATAATGGTTTGACGATTGAAGGAACATCGTACTTCCCCGAGAGAGTTTACATTACTGATGTGCCATTGTACTACGGCAAAGACAATGCAACGAAAGCAATATGCAATACTGGGTCACTGGATCACAACGAAGTGGCAGGAAAGGTAGTCCTTTGTGATAATACCACCGAGACTCCCGTCAATGGAGTCGACTTCCAAAAGAAGGAGGTGGAGAGGGCAGGTGGTTATGCTGGAATCTTCATGGCAGATCTCTCACTTTTAGAGCCAGAAGACTTCTCCATTCCTGCTATCATTGTTCCATTTGCTACAGGGGCCTTGATTAGAGAGTATGCAACGCAGGTCCATACACCTAGAGTTAAGATCCTGAGTTTTGTGCACACAAATTTGGGTACAAAACCATCACCGGAAGTAGCGTATTTCTCTTCAAGAGGACCAGACCCAATCACTCCTGGTATTCTAAAACCAGACATTCTTGCTCCAGGAGTCGATGTGCTTGCTGCAGTTACACCTAACAACCCATGCATGGAAGTAAACAATTATAATCTAGTGACAGATTATGAACTATATTCAGGAACATCAATGGCGGCACCCCATGTCGCTGGTGTGGCAGCTCTGGTAAAGGCTGTTCACCGAAAATGGAGTCCAGCAGCCATCCGATCGGCCATCATGACCACAGCATACTCAACCGCCAATTCTCACACCAGCATACAAGACCAATGGTCCGGTCTTCCAGCCACACCTTTAGATTTTGGTGCAGGCCACATCAACCCGAATAAGGCCATGAACCCCGGACTAGTCTATGACATGAATGTGCAAGACTACATTGATTTTCTTTGTACCCTAGGATACAATGACAAGCAGATGAAATCTGTTATTAGACGAAGCCAGTGGACTTGCAGACAGCCCCCTACCGAACTAAACTACCCCTCATTCGTGGCCATCTTCAACAAAACAGACTCTCCAAAAGCCAAAAACTTTAGCAGGGTCGTGACAAACGTGGGGGATGATACCTCCATCTACCGAGCATTTCTAGAAGTTCCTAGAGGAATGAGGATTACAGTAGAGCCTAATTCTCTTACATTCACCGGAAAATATCAGCAGCAAGGTTTTGTTTTGAATGTAGAGATCGATAGTGATGCTCCTAAGGTGATCTACGGTTATCTCAGATGGGTTGATCACCATGATCACATGGTATCAAACCCTGTAGTGGCCATTAATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

746

Amino Acids

81.2

Weight (kDa)

6.43

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	120 - 571	1.3e-43	Subtilase family
fn3_6	PF17766	644 - 742	9.9e-23	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006405)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g07840 FvH4_4g07840 FvH4_4g07840 FvH4_4g07840 FvH4_4g07840 FvH4_5g11380 FvH4_5g11380
malus_domestica	MD06G1114200.v1.1 MD14G1135500.v1.1
prunus_persica	Prupe.5G127000_v2.0.a1 Prupe.5G127000_v2.0.a1
pyrus_communis	pycom06g10680 pycom14g10870
rosa_chinensis	RchiOBHm_Chr7g0186491
rosa_laevigata	RLG00000004841
rosa_multiflora	Rmu_co8455067.1_g000001 Rmu_sc0000645.1_g000031
rosa_roxburghii	Rroxscaffold_3G00268100 Rroxscaffold_4G00302490
rosa_rugosa	Rorug06G0474700
rosa_samantha	Rh6CG051800 Rh7AG066600 Rh7BG082400 Rh7CG081200 Rh7DG082000
rosa_wichuraiana	Rw7G006820 Rw7G007060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1557
AarI	CACCTGC	1 cut(s)	1226
Acc36I	ACCTGC	3 cut(s)	623, 1226, 1345
AccB1I	GGYRCC	2 cut(s)	694, 1603
AccI	GTMKAC	1 cut(s)	1206
AccIII	TCCGGA	1 cut(s)	268
AciI	CCGC	2 cut(s)	1601, 1704
AclWI	GGATC	5 cut(s)	111, 516, 968, 1146, 1372
AcoI	YGGCCR	5 cut(s)	358, 398, 1677, 1953, 2226
AcsI	RAATTY	1 cut(s)	1399
AcuI	CTGAAG	1 cut(s)	456
AcyI	GRCGYC	1 cut(s)	695
AfaI	GTAC	9 cut(s)	37, 177, 645, 719, 937, 1049, 1088, 1408, 1855
AfiI	CCNNNNNNNGG	6 cut(s)	396, 1199, 1219, 1540, 1792, 2224
AgsI	TTSAA	6 cut(s)	66, 850, 1037, 1443, 1963, 2134
AhdI	GACNNNNNGTC	1 cut(s)	1735
AhlI	ACTAGT	1 cut(s)	1810
AjnI	CCWGG	5 cut(s)	210, 728, 956, 1465, 1495
AluBI	AGCT	6 cut(s)	222, 286, 303, 508, 629, 1628
AluI	AGCT	6 cut(s)	222, 286, 303, 508, 629, 1628
Alw21I	GWGCWC	2 cut(s)	955, 1395
Alw26I	GTCTC	4 cut(s)	249, 316, 825, 1181
Alw44I	GTGCAC	1 cut(s)	1391
AlwI	GGATC	5 cut(s)	111, 516, 968, 1146, 1372
Ama87I	CYCGRG	1 cut(s)	1055
Aor13HI	TCCGGA	1 cut(s)	268
AoxI	GGCC	9 cut(s)	358, 398, 535, 1329, 1677, 1774, 1794, 1953, 2226
ApaLI	GTGCAC	1 cut(s)	1391
ApeKI	GCWGC	7 cut(s)	545, 629, 911, 1514, 1625, 1664, 2116
ApoI	RAATTY	1 cut(s)	1399
ArsI	GACNNNNNNTTYG	2 cut(s)	1642, 1674
AseI	ATTAAT	1 cut(s)	2232
AspA2I	CCTAGG	1 cut(s)	1858
AspLEI	GCGC	2 cut(s)	653, 697
AspS9I	GGNCC	5 cut(s)	781, 1329, 1357, 1448, 1737
AsuC2I	CCSGG	2 cut(s)	648, 1806
AsuHPI	GGTGA	8 cut(s)	43, 431, 576, 1410, 1637, 2092, 2176, 2186
AvaI	CYCGRG	1 cut(s)	1055
AvaII	GGWCC	4 cut(s)	781, 1357, 1448, 1737
AvrII	CCTAGG	1 cut(s)	1858
AxyI	CCTNAGG	1 cut(s)	2160
BaeGI	GKGCMC	1 cut(s)	1395
BaeI	ACNNNNGTAYC	2 cut(s)	378, 411
BalI	TGGCCA	4 cut(s)	360, 400, 1955, 2228
BanI	GGYRCC	2 cut(s)	694, 1603
BanII	GRGCYC	2 cut(s)	520, 706
BauI	CACGAG	2 cut(s)	137, 699
BbsI	GAAGAC	2 cut(s)	1293, 1736
Bbv12I	GWGCWC	2 cut(s)	955, 1395
BbvCI	CCTCAGC	1 cut(s)	72
BbvI	GCAGC	7 cut(s)	557, 616, 898, 1501, 1637, 1676, 2128
BccI	CCATC	9 cut(s)	444, 496, 791, 1423, 1676, 1688, 1964, 2039, 2178
BceAI	ACGGC	2 cut(s)	696, 1108
BcgI	CGANNNNNNTGC	8 cut(s)	723, 757, 842, 876, 1493, 1527, 2135, 2169
BciT130I	CCWGG	5 cut(s)	212, 730, 958, 1467, 1497
BciVI	GTATCC	2 cut(s)	276, 1856
BclI	TGATCA	3 cut(s)	369, 2191, 2200
BcnI	CCSGG	2 cut(s)	648, 1806
BcoDI	GTCTC	4 cut(s)	249, 316, 825, 1181
BcuI	ACTAGT	1 cut(s)	1810
BfmI	CTRYAG	4 cut(s)	630, 1323, 1515, 2220
BfoI	RGCGCY	1 cut(s)	698
BfuAI	ACCTGC	3 cut(s)	623, 1226, 1345
BfuI	GTATCC	2 cut(s)	276, 1856
BglII	AGATCT	1 cut(s)	1264
BisI	GCNGC	8 cut(s)	546, 630, 912, 1515, 1602, 1626, 1665, 2117
BlnI	CCTAGG	1 cut(s)	1858
BlsI	GCNGC	8 cut(s)	547, 631, 913, 1516, 1603, 1627, 1666, 2118
Bme1390I	CCNGG	7 cut(s)	212, 648, 730, 958, 1467, 1497, 1806
Bme18I	GGWCC	4 cut(s)	781, 1357, 1448, 1737
BmeRI	GACNNNNNGTC	1 cut(s)	1735
BmeT110I	CYCGRG	1 cut(s)	1055
BmgT120I	GGNCC	5 cut(s)	781, 1329, 1357, 1448, 1737
BmiI	GGNNCC	4 cut(s)	696, 976, 1330, 1605
BmrFI	CCNGG	7 cut(s)	212, 648, 730, 958, 1467, 1497, 1806
BmrI	ACTGGG	1 cut(s)	1137
BmsI	GCATC	1 cut(s)	2143
BmuI	ACTGGG	1 cut(s)	1137
BoxI	GACNNNNGTC	1 cut(s)	1193
BpiI	GAAGAC	2 cut(s)	1293, 1736
BpmI	CTGGAG	1 cut(s)	1479
Bpu10I	CCTNAGC	1 cut(s)	72
BpuMI	CCSGG	2 cut(s)	648, 1806
Bsa29I	ATCGAT	1 cut(s)	2145
BsaAI	YACGTR	1 cut(s)	264
BsaHI	GRCGYC	1 cut(s)	695
BsaI	GGTCTC	1 cut(s)	249
BsaJI	CCNNGG	5 cut(s)	587, 729, 956, 1804, 1858
BsaWI	WCCGGW	5 cut(s)	268, 389, 1420, 1739, 2102
BsaXI	ACNNNNNCTCC	6 cut(s)	1174, 1204, 1491, 1521, 1960, 1990
Bsc4I	CCNNNNNNNGG	6 cut(s)	396, 1199, 1219, 1540, 1792, 2224
Bse1I	ACTGG	4 cut(s)	599, 1132, 1140, 1903
Bse21I	CCTNAGG	1 cut(s)	2160
Bse3DI	GCAATG	2 cut(s)	858, 864
BseAI	TCCGGA	1 cut(s)	268
BseBI	CCWGG	5 cut(s)	212, 730, 958, 1467, 1497
BseCI	ATCGAT	1 cut(s)	2145
BseDI	CCNNGG	5 cut(s)	587, 729, 956, 1804, 1858
BseGI	GGATG	2 cut(s)	1668, 2026
BseLI	CCNNNNNNNGG	6 cut(s)	396, 1199, 1219, 1540, 1792, 2224
BseMI	GCAATG	2 cut(s)	858, 864
BseMII	CTCAG	5 cut(s)	63, 311, 345, 1373, 2194
BseNI	ACTGG	4 cut(s)	599, 1132, 1140, 1903
BseSI	GKGCMC	1 cut(s)	1395
BseXI	GCAGC	7 cut(s)	557, 616, 898, 1501, 1637, 1676, 2128
BsgI	GTGCAG	1 cut(s)	1791
Bsh1285I	CGRYCG	1 cut(s)	1676
BshFI	GGCC	9 cut(s)	360, 400, 537, 1331, 1679, 1776, 1796, 1955, 2228
BshNI	GGYRCC	2 cut(s)	694, 1603
BshVI	ATCGAT	1 cut(s)	2145
BsiEI	CGRYCG	1 cut(s)	1676
BsiHKAI	GWGCWC	2 cut(s)	955, 1395
BsiHKCI	CYCGRG	1 cut(s)	1055
BsiSI	CCGG	9 cut(s)	248, 269, 390, 648, 978, 1421, 1740, 1806, 2103
BslFI	GGGAC	1 cut(s)	605
BslI	CCNNNNNNNGG	6 cut(s)	396, 1199, 1219, 1540, 1792, 2224
BsmAI	GTCTC	4 cut(s)	249, 316, 825, 1181
BsmBI	CGTCTC	1 cut(s)	316
BsmFI	GGGAC	1 cut(s)	605
BsnI	GGCC	9 cut(s)	360, 400, 537, 1331, 1679, 1776, 1796, 1955, 2228
Bso31I	GGTCTC	1 cut(s)	249
BsoBI	CYCGRG	1 cut(s)	1055
Bsp1286I	GDGCHC	4 cut(s)	520, 706, 955, 1395
Bsp13I	TCCGGA	1 cut(s)	268
Bsp1407I	TGTACA	1 cut(s)	717
BspACI	CCGC	2 cut(s)	1601, 1704
BspANI	GGCC	9 cut(s)	360, 400, 537, 1331, 1679, 1776, 1796, 1955, 2228
BspCNI	CTCAG	5 cut(s)	64, 312, 344, 1374, 2193
BspDI	ATCGAT	1 cut(s)	2145
BspEI	TCCGGA	1 cut(s)	268
BspHI	TCATGA	1 cut(s)	1683
BspLI	GGNNCC	4 cut(s)	696, 976, 1330, 1605
BspMAI	CTGCAG	2 cut(s)	634, 1519
BspMI	ACCTGC	3 cut(s)	623, 1226, 1345
BspPI	GGATC	5 cut(s)	111, 516, 968, 1146, 1372
BspT107I	GGYRCC	2 cut(s)	694, 1603
BspTNI	GGTCTC	1 cut(s)	249
BsrDI	GCAATG	2 cut(s)	858, 864
BsrGI	TGTACA	1 cut(s)	717
BsrI	ACTGG	4 cut(s)	599, 1132, 1140, 1903
BssECI	CCNNGG	5 cut(s)	587, 729, 956, 1804, 1858
BssNI	GRCGYC	1 cut(s)	695
BssSI	CACGAG	2 cut(s)	137, 699
BssT1I	CCWWGG	1 cut(s)	1858
Bst2BI	CACGAG	2 cut(s)	137, 699
Bst2UI	CCWGG	5 cut(s)	212, 730, 958, 1467, 1497
Bst4CI	ACNGT	7 cut(s)	201, 232, 819, 935, 970, 2077, 2174
Bst6I	CTCTTC	1 cut(s)	1444
BstACI	GRCGYC	1 cut(s)	695
BstAUI	TGTACA	1 cut(s)	717
BstBAI	YACGTR	1 cut(s)	264
BstC8I	GCNNGC	5 cut(s)	345, 771, 775, 1512, 1774
BstDEI	CTNAG	6 cut(s)	72, 320, 331, 1382, 2160, 2180
BstDSI	CCRYGG	1 cut(s)	587
BstEII	GGTNACC	1 cut(s)	635
BstF5I	GGATG	2 cut(s)	1668, 2026
BstH2I	RGCGCY	1 cut(s)	698
BstHHI	GCGC	2 cut(s)	653, 697
BstMAI	GTCTC	4 cut(s)	249, 316, 825, 1181
BstMCI	CGRYCG	1 cut(s)	1676
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 701, 710, 1112, 1328, 1622
BstNI	CCWGG	5 cut(s)	212, 730, 958, 1467, 1497
BstPAI	GACNNNNGTC	1 cut(s)	1193
BstPI	GGTNACC	1 cut(s)	635
BstSCI	CCNGG	7 cut(s)	210, 646, 728, 956, 1465, 1495, 1804
BstSFI	CTRYAG	4 cut(s)	630, 1323, 1515, 2220
BstSLI	GKGCMC	1 cut(s)	1395
BstV1I	GCAGC	7 cut(s)	557, 616, 898, 1501, 1637, 1676, 2128
BstV2I	GAAGAC	2 cut(s)	1293, 1736
BstX2I	RGATCY	2 cut(s)	1264, 1377
BstXI	CCANNNNNNTGG	3 cut(s)	450, 594, 1616
BstYI	RGATCY	2 cut(s)	1264, 1377
Bsu15I	ATCGAT	1 cut(s)	2145
Bsu36I	CCTNAGG	1 cut(s)	2160
BsuI	GTATCC	2 cut(s)	276, 1856
BsuRI	GGCC	9 cut(s)	360, 400, 537, 1331, 1679, 1776, 1796, 1955, 2228
BsuTUI	ATCGAT	1 cut(s)	2145
BtgI	CCRYGG	1 cut(s)	587
BtsCI	GGATG	2 cut(s)	1668, 2026
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	6 cut(s)	212, 815, 999, 1007, 1133, 1910
BveI	ACCTGC	3 cut(s)	623, 1226, 1345
Cac8I	GCNNGC	5 cut(s)	345, 771, 775, 1512, 1774
CciI	TCATGA	1 cut(s)	1683
CfoI	GCGC	2 cut(s)	653, 697
Cfr13I	GGNCC	5 cut(s)	781, 1329, 1357, 1448, 1737
ClaI	ATCGAT	1 cut(s)	2145
CseI	GACGC	1 cut(s)	336
Csp6I	GTAC	9 cut(s)	36, 176, 644, 718, 936, 1048, 1087, 1407, 1854
CspCI	CAANNNNNGTGG	2 cut(s)	672, 707
CviQI	GTAC	9 cut(s)	36, 176, 644, 718, 936, 1048, 1087, 1407, 1854
DdeI	CTNAG	6 cut(s)	72, 320, 331, 1382, 2160, 2180
DinI	GGCGCC	1 cut(s)	696
DriI	GACNNNNNGTC	1 cut(s)	1735
EaeI	YGGCCR	5 cut(s)	358, 398, 1677, 1953, 2226
Eam1104I	CTCTTC	1 cut(s)	1444
Eam1105I	GACNNNNNGTC	1 cut(s)	1735
EarI	CTCTTC	1 cut(s)	1444
Eco130I	CCWWGG	1 cut(s)	1858
Eco147I	AGGCCT	1 cut(s)	537
Eco24I	GRGCYC	2 cut(s)	520, 706
Eco31I	GGTCTC	1 cut(s)	249
Eco47I	GGWCC	4 cut(s)	781, 1357, 1448, 1737
Eco57I	CTGAAG	1 cut(s)	456
Eco81I	CCTNAGG	1 cut(s)	2160
Eco88I	CYCGRG	1 cut(s)	1055
Eco91I	GGTNACC	1 cut(s)	635
EcoO109I	RGGNCCY	1 cut(s)	1329
EcoO65I	GGTNACC	1 cut(s)	635
EcoRII	CCWGG	5 cut(s)	210, 728, 956, 1465, 1495
EcoT14I	CCWWGG	1 cut(s)	1858
EcoT22I	ATGCAT	1 cut(s)	1541
EcoT38I	GRGCYC	2 cut(s)	520, 706
EgeI	GGCGCC	1 cut(s)	696
EheI	GGCGCC	1 cut(s)	696
ErhI	CCWWGG	1 cut(s)	1858
Esp3I	CGTCTC	1 cut(s)	316
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FaqI	GGGAC	1 cut(s)	605
FbaI	TGATCA	3 cut(s)	369, 2191, 2200
FblI	GTMKAC	1 cut(s)	1206
Fnu4HI	GCNGC	8 cut(s)	546, 630, 912, 1515, 1602, 1626, 1665, 2117
FokI	GGATG	2 cut(s)	1655, 2033
FriOI	GRGCYC	2 cut(s)	520, 706
Fsp4HI	GCNGC	8 cut(s)	546, 630, 912, 1515, 1602, 1626, 1665, 2117
GlaI	GCGC	2 cut(s)	652, 696
GluI	GCNGC	8 cut(s)	546, 630, 912, 1515, 1602, 1626, 1665, 2117
GsuI	CTGGAG	1 cut(s)	1479
HaeII	RGCGCY	1 cut(s)	698
HaeIII	GGCC	9 cut(s)	360, 400, 537, 1331, 1679, 1776, 1796, 1955, 2228
HapII	CCGG	9 cut(s)	248, 269, 390, 648, 978, 1421, 1740, 1806, 2103
HgaI	GACGC	1 cut(s)	336
HhaI	GCGC	2 cut(s)	653, 697
Hin1I	GRCGYC	1 cut(s)	695
Hin6I	GCGC	2 cut(s)	651, 695
HinP1I	GCGC	2 cut(s)	651, 695
HincII	GTYRAC	2 cut(s)	624, 1207
HindII	GTYRAC	2 cut(s)	624, 1207
HpaII	CCGG	9 cut(s)	248, 269, 390, 648, 978, 1421, 1740, 1806, 2103
HphI	GGTGA	8 cut(s)	43, 431, 576, 1410, 1637, 2092, 2176, 2186
Hpy166II	GTNNAC	7 cut(s)	624, 1066, 1207, 1393, 1549, 1645, 1908
Hpy188I	TCNGA	7 cut(s)	236, 436, 665, 745, 796, 1673, 2183
Hpy8I	GTNNAC	7 cut(s)	624, 1066, 1207, 1393, 1549, 1645, 1908
HpyAV	CCTTC	5 cut(s)	129, 848, 1006, 1031, 1213
HpyCH4III	ACNGT	7 cut(s)	201, 232, 819, 935, 970, 2077, 2174
HpyCH4IV	ACGT	2 cut(s)	263, 2013
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 701, 710, 1112, 1328, 1622
HpyF3I	CTNAG	6 cut(s)	72, 320, 331, 1382, 2160, 2180
HpySE526I	ACGT	2 cut(s)	263, 2013
Hsp92I	GRCGYC	1 cut(s)	695
HspAI	GCGC	2 cut(s)	651, 695
KasI	GGCGCC	1 cut(s)	694
Kpn2I	TCCGGA	1 cut(s)	268
Ksp22I	TGATCA	3 cut(s)	369, 2191, 2200
LmnI	GCTCC	5 cut(s)	308, 950, 974, 1498, 2161
Lsp1109I	GCAGC	7 cut(s)	557, 616, 898, 1501, 1637, 1676, 2128
LweI	GCATC	1 cut(s)	2143
MaeII	ACGT	2 cut(s)	263, 2013
MaeIII	GTNAC	7 cut(s)	611, 635, 813, 1131, 1519, 1564, 2005
MboII	GAAGA	5 cut(s)	1246, 1298, 1431, 1736, 1951
MflI	RGATCY	2 cut(s)	1264, 1377
MhlI	GDGCHC	4 cut(s)	520, 706, 955, 1395
MlsI	TGGCCA	4 cut(s)	360, 400, 1955, 2228
MluCI	AATT	8 cut(s)	237, 552, 789, 894, 1399, 1552, 1708, 2086
MluNI	TGGCCA	4 cut(s)	360, 400, 1955, 2228
Mly113I	GGCGCC	1 cut(s)	695
MlyI	GAGTC	9 cut(s)	127, 281, 734, 1006, 1183, 1212, 1509, 1666, 1967
Mox20I	TGGCCA	4 cut(s)	360, 400, 1955, 2228
Mph1103I	ATGCAT	1 cut(s)	1541
MroI	TCCGGA	1 cut(s)	268
MscI	TGGCCA	4 cut(s)	360, 400, 1955, 2228
MseI	TTAA	3 cut(s)	555, 1374, 2232
MslI	CAYNNNNRTG	2 cut(s)	98, 1826
Msp20I	TGGCCA	4 cut(s)	360, 400, 1955, 2228
MspA1I	CMGCKG	1 cut(s)	629
MspI	CCGG	9 cut(s)	248, 269, 390, 648, 978, 1421, 1740, 1806, 2103
MspR9I	CCNGG	7 cut(s)	212, 648, 730, 958, 1467, 1497, 1806
MvaI	CCWGG	5 cut(s)	212, 730, 958, 1467, 1497
MwoI	GCNNNNNNNGC	6 cut(s)	257, 701, 710, 1112, 1328, 1622
NarI	GGCGCC	1 cut(s)	695
NciI	CCSGG	2 cut(s)	648, 1806
NlaIV	GGNNCC	4 cut(s)	696, 976, 1330, 1605
NmuCI	GTSAC	5 cut(s)	611, 813, 1131, 1564, 2005
NsiI	ATGCAT	1 cut(s)	1541
PagI	TCATGA	1 cut(s)	1683
PaqCI	CACCTGC	1 cut(s)	1226
PceI	AGGCCT	1 cut(s)	537
PcsI	WCGNNNNNNNCGW	1 cut(s)	2010
PfeI	GAWTC	4 cut(s)	77, 378, 581, 1251
PfoI	TCCNGGA	1 cut(s)	1495
PkrI	GCNGC	8 cut(s)	547, 631, 913, 1516, 1603, 1627, 1666, 2118
Ple19I	CGATCG	1 cut(s)	1676
PleI	GAGTC	9 cut(s)	127, 280, 734, 1006, 1183, 1211, 1508, 1665, 1967
PluTI	GGCGCC	1 cut(s)	698
PpsI	GAGTC	9 cut(s)	127, 280, 734, 1006, 1183, 1211, 1508, 1665, 1967
Ppu21I	YACGTR	1 cut(s)	264
PshAI	GACNNNNGTC	1 cut(s)	1193
PshBI	ATTAAT	1 cut(s)	2232
PsiI	TTATAA	1 cut(s)	1557
Psp6I	CCWGG	5 cut(s)	210, 728, 956, 1465, 1495
PspEI	GGTNACC	1 cut(s)	635
PspGI	CCWGG	5 cut(s)	210, 728, 956, 1465, 1495
PspN4I	GGNNCC	4 cut(s)	696, 976, 1330, 1605
PspPI	GGNCC	5 cut(s)	781, 1329, 1357, 1448, 1737
PsrI	GAACNNNNNNTAC	2 cut(s)	1626, 1658
PstI	CTGCAG	2 cut(s)	634, 1519
PsuI	RGATCY	2 cut(s)	1264, 1377
PvuI	CGATCG	1 cut(s)	1676
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	9 cut(s)	37, 177, 645, 719, 937, 1049, 1088, 1408, 1855
RsaNI	GTAC	9 cut(s)	36, 176, 644, 718, 936, 1048, 1087, 1407, 1854
RseI	CAYNNNNRTG	2 cut(s)	98, 1826
SalI	GTCGAC	1 cut(s)	1205
SaqAI	TTAA	3 cut(s)	555, 1374, 2232
SatI	GCNGC	8 cut(s)	546, 630, 912, 1515, 1602, 1626, 1665, 2117
Sau96I	GGNCC	5 cut(s)	781, 1329, 1357, 1448, 1737
SchI	GAGTC	9 cut(s)	127, 281, 734, 1006, 1183, 1212, 1509, 1666, 1967
ScrFI	CCNGG	7 cut(s)	212, 648, 730, 958, 1467, 1497, 1806
SduI	GDGCHC	4 cut(s)	520, 706, 955, 1395
SfaNI	GCATC	1 cut(s)	2143
SfcI	CTRYAG	4 cut(s)	630, 1323, 1515, 2220
SfoI	GGCGCC	1 cut(s)	696
SinI	GGWCC	4 cut(s)	781, 1357, 1448, 1737
SmiMI	CAYNNNNRTG	2 cut(s)	98, 1826
SpeI	ACTAGT	1 cut(s)	1810
Sse9I	AATT	8 cut(s)	237, 552, 789, 894, 1399, 1552, 1708, 2086
SseBI	AGGCCT	1 cut(s)	537
SsiI	CCGC	2 cut(s)	1601, 1704
SspDI	GGCGCC	1 cut(s)	694
StuI	AGGCCT	1 cut(s)	537
StyD4I	CCNGG	7 cut(s)	210, 646, 728, 956, 1465, 1495, 1804
StyI	CCWWGG	1 cut(s)	1858
TaaI	ACNGT	7 cut(s)	201, 232, 819, 935, 970, 2077, 2174
TaiI	ACGT	2 cut(s)	266, 2016
TaqI	TCGA	6 cut(s)	520, 579, 885, 1206, 1503, 2145
TasI	AATT	8 cut(s)	237, 552, 789, 894, 1399, 1552, 1708, 2086
TatI	WGTACW	4 cut(s)	175, 717, 935, 1086
TauI	GCSGC	1 cut(s)	1604
TfiI	GAWTC	4 cut(s)	77, 378, 581, 1251
Tru1I	TTAA	3 cut(s)	555, 1374, 2232
Tru9I	TTAA	3 cut(s)	555, 1374, 2232
TscAI	CASTG	6 cut(s)	212, 822, 1006, 1014, 1140, 1910
TseFI	GTSAC	5 cut(s)	611, 813, 1131, 1564, 2005
TseI	GCWGC	7 cut(s)	545, 629, 911, 1514, 1625, 1664, 2116
Tsp45I	GTSAC	5 cut(s)	611, 813, 1131, 1564, 2005
TspDTI	ATGAA	5 cut(s)	1246, 1590, 1814, 1838, 1895
TspGWI	ACGGA	1 cut(s)	340
TspRI	CASTG	6 cut(s)	212, 822, 1006, 1014, 1140, 1910
VneI	GTGCAC	1 cut(s)	1391
VpaK11BI	GGWCC	4 cut(s)	781, 1357, 1448, 1737
VspI	ATTAAT	1 cut(s)	2232
XapI	RAATTY	1 cut(s)	1399
XbaI	TCTAGA	2 cut(s)	1015, 2047
XmaJI	CCTAGG	1 cut(s)	1858
XmiI	GTMKAC	1 cut(s)	1206
Zsp2I	ATGCAT	1 cut(s)	1541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.