Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0003602

Physical Location & Seq

Genomic Coordinates Reverse (-)

25656276 .. 25664528

Gene Structure 8253 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1117800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGGGAGGATGGGGAGCAATTCGAGGCTTCACTCGGCGAATCCGAACGACTACAAGCTTCTGGAAGAGGTCGGATATGGCGCCAGCGCAACGGTTTACAGAGCGATCTATCTCCCTTTCAATGAAGTCGTCGCCGTCAAGTGCTTGGATCTCGATCGGTGCAATAGCAATTTCGAGGATATCCGGAGGGAGGCGCAGACGATGAGATTAATAGATCATCCCAATGTCGTGAGGGCGTTTTGTTCATTTGTCGTTGAAAGAAACCTTTGGGTGATCATGCCATTTATGGCAGAGGGTTCTTGTTTGCACCTCATGAAAATCGCATATCCGGATGGGTTTGAGGAGTCGGCCATTGGTTCTATTCTTAAGGAAACCCTCAAGGCTTTGGTTTACCTTCATAAACAAGGTCATATTCACAGAGATGTGAAGGCTGGAAATATATTACTTGATAGTAATGGGGCGGTGAAGCTTGCCGATTTTGGTGTTTCAGCTTGCATGTTTGAGGCAGCTGATAGACAACGGTCAAGAAACACTTTTGTAGGAACGCCGTGCTGGATGGCACCAGAGGTATTGCAACCAGGAAGTGGATACAATTCCAAGGCTGACATTTGGTCATTTGGTATAACGGCGTTGGAGTTGGCCCATGGTCATGCACCATTTTCAAAATACCCTCCAATGAAGGTTCTTCTCATGACCATACAGAATGCCCCTCCAGGACTTGATTATGACCGTGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCTTGGTAAAAGATCAAACAAAGAGACCAACAGCAGAGAAATTATTAAAACACTCCTTTTTCAAGCATGCAAAACCTCCAGAGCTTTCTATAAAGAAATTGTTTACGGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTTAAAGATGCAGCACAACTGGCTTTAAAGAAAATGCCGTCAGCAGAGCAAGAGGCAATGTCACAGAGTGAGTACCAGCGAGGAGTTAGTGCCTGGAACTTTGACGTTGAGGATTTAAAAGCTCAAGCATCCCTGATGCGAGATGATGATGATGAAATGATGGATGAAGATGAAAAATTTAAACCTGTTAGTGGTGATAAGATTGAAACTAGTTGGCGTTCCAGTTTGGGGAAGTTGAACGAAAATAATGAATCATATTGGACTGATTACAAAGGAGAAATCAAAGGTGATGAATCACAACAGGTTGAATGCTTAAACAAAAAGGGCAAGGATCTTGAAAGTAATTTATTGGAATCTGCTGGCCAGCAGAAAACAGGCTGGAAGACAAATGAATCAAGCTCTGAGGCAACAGCGTCTACATCAGAAAAAGACACGGTGCAGGCCAAGCCTAAACCTCTTATTGTGAAAAGTCGTCAAACGCAGAGTGGTCCAATCACACCTGGTGCTGGACTTGGTCATTCAGTATCAGAAAGGGGCCACATCTTTGAAAGGAATGAGAATGAAAATCAACCTATAATTGATAAAGGTAAATGTGAAGTACGACGAACACCAAGCTTTAGTGGTCCACTGATGCTTCCCAATCGAGCTTCAGCAAACAGTTTATCAGCTCCTATAAAATCTTCTGGAGGATTTAGAGATTCTTTGGATGACAAGTCAAAGGCTAATTTGGTGCAAATTAGGGGGAGATTTTCAGTGACATCAGAAAATTTGGATCTTGTAAAGGATATTCCATCGAGTACAGTACCTCGTCGTTCTTCACAGGGATCACCTCTGAGAAAGTCTGCTAGCGTTGGTGATTGGGTATTTGACTCCAGGCAAATGCCTGCCACTCTGTCAACAAAGGAGTTCAACAACAGCAACGTACCTGCATCACTTCTCCTGCCTCACCTTCAGAATCTTTTTCAACAGACGTTGATTCAACAGGATATTATTATGAATTTGCTAAACAGCTTGCAACCAGCTGAGGCAGTAGAAGCTACTCAAAATGGAAAGTTACCTCCATTGCCTCGCAGTTCTGAGAACAATGGAAATGTTGAAACTGCAGTTTCTGAGAGGGAGCGTTTATTGCTCGCCAAAGTATCGGAGCTACAAGCCAGGATGAACAACTTGAGTGATGAACTGAATGCTGAAAAGATGAGACACATTCAATTGCAACAACAGCTAAATGCTGTATGTGGGAAAGAAAATGGAGAAAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

728

Amino Acids

80.98

Weight (kDa)

7.57

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	18 - 279	9.7e-61	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	19 - 275	8.9e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10730 AT4G10730 AT4G24100 AT4G24100 AT4G24100 AT4G24100
fragaria_vesca	FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990
malus_domestica	MD06G1117800.v1.1 MD14G1125200.v1.1
prunus_persica	Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1
pyrus_communis	pycom06g10950
rosa_chinensis	RchiOBHm_Chr7g0186821
rosa_laevigata	RLG00000004812
rosa_multiflora	Rmu_sc0022028.1_g000001 Rmu_ssc0000024.1_g000040
rosa_roxburghii	Rroxscaffold_3G00267790
rosa_rugosa	Rorug06G0477000 Rorug06G0477100 Rorug06G0477200 Rorug06G0477300
rosa_samantha	Rh4AG189200 Rh4AG190000 Rh7AG063500 Rh7BG079900 Rh7CG084000 Rh7DG084900
rosa_wichuraiana	Rw7G007290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1855
AccB1I	GGYRCC	2 cut(s)	80, 559
AccB7I	CCANNNNNTGG	1 cut(s)	584
AccI	GTMKAC	1 cut(s)	1337
AccIII	TCCGGA	2 cut(s)	183, 328
AciI	CCGC	1 cut(s)	461
AclWI	GGATC	4 cut(s)	156, 1260, 1701, 1753
AcoI	YGGCCR	2 cut(s)	348, 1282
AcsI	RAATTY	3 cut(s)	1097, 1687, 1918
AcuI	CTGAAG	2 cut(s)	1554, 1856
AcyI	GRCGYC	1 cut(s)	81
AdeI	CACNNNGTG	2 cut(s)	989, 1424
AfaI	GTAC	5 cut(s)	995, 1521, 1720, 1725, 1845
AfiI	CCNNNNNNNGG	5 cut(s)	190, 584, 1112, 1149, 1427
AflII	CTTAAG	1 cut(s)	365
AhdI	GACNNNNNGTC	1 cut(s)	610
AhlI	ACTAGT	1 cut(s)	1130
AjnI	CCWGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
Alw26I	GTCTC	2 cut(s)	793, 2113
AlwI	GGATC	4 cut(s)	156, 1260, 1701, 1753
AlwNI	CAGNNNCTG	1 cut(s)	2030
Aor13HI	TCCGGA	2 cut(s)	183, 328
AoxI	GGCC	5 cut(s)	348, 639, 1282, 1362, 1456
ApeKI	GCWGC	2 cut(s)	506, 932
ApoI	RAATTY	3 cut(s)	1097, 1687, 1918
AseI	ATTAAT	1 cut(s)	209
AspLEI	GCGC	3 cut(s)	83, 89, 196
AspS9I	GGNCC	4 cut(s)	640, 1409, 1456, 1544
AsuHPI	GGTGA	7 cut(s)	283, 475, 1127, 1220, 1740, 1787, 1859
AsuNHI	GCTAGC	1 cut(s)	1766
AvaII	GGWCC	2 cut(s)	1409, 1544
BalI	TGGCCA	1 cut(s)	1284
BanI	GGYRCC	2 cut(s)	80, 559
BbsI	GAAGAC	1 cut(s)	1310
BbvCI	CCTCAGC	1 cut(s)	1944
BbvI	GCAGC	2 cut(s)	518, 944
BccI	CCATC	5 cut(s)	4, 326, 550, 1075, 1720
BceAI	ACGGC	4 cut(s)	119, 532, 642, 943
BciT130I	CCWGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
BciVI	GTATCC	1 cut(s)	581
BclI	TGATCA	1 cut(s)	273
BcoDI	GTCTC	2 cut(s)	793, 2113
BcuI	ACTAGT	1 cut(s)	1130
BfaI	CTAG	2 cut(s)	1131, 1767
BfmI	CTRYAG	1 cut(s)	2022
BfoI	RGCGCY	1 cut(s)	84
BfrI	CTTAAG	1 cut(s)	365
BfuAI	ACCTGC	1 cut(s)	1855
BfuI	GTATCC	1 cut(s)	581
BisI	GCNGC	2 cut(s)	507, 933
BlsI	GCNGC	2 cut(s)	508, 934
Bme1390I	CCNGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
Bme18I	GGWCC	2 cut(s)	1409, 1544
BmeRI	GACNNNNNGTC	1 cut(s)	610
BmgT120I	GGNCC	4 cut(s)	640, 1409, 1456, 1544
BmiI	GGNNCC	3 cut(s)	82, 561, 1457
BmrFI	CCNGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
BmsI	GCATC	5 cut(s)	919, 1047, 1058, 1542, 1859
BmtI	GCTAGC	1 cut(s)	1770
BoxI	GACNNNNGTC	1 cut(s)	520
BpiI	GAAGAC	1 cut(s)	1310
BpmI	CTGGAG	5 cut(s)	696, 837, 902, 1626, 1777
Bpu10I	CCTNAGC	1 cut(s)	1944
BpuEI	CTTGAG	3 cut(s)	362, 1029, 2110
BsaBI	GATNNNNATC	1 cut(s)	153
BsaHI	GRCGYC	1 cut(s)	81
BsaI	GGTCTC	1 cut(s)	793
BsaJI	CCNNGG	2 cut(s)	597, 643
BsaWI	WCCGGW	2 cut(s)	183, 328
Bsc4I	CCNNNNNNNGG	5 cut(s)	190, 584, 1112, 1149, 1427
Bse1I	ACTGG	2 cut(s)	945, 1143
Bse3DI	GCAATG	3 cut(s)	777, 984, 1982
Bse8I	GATNNNNATC	1 cut(s)	153
BseAI	TCCGGA	2 cut(s)	183, 328
BseBI	CCWGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
BseDI	CCNNGG	2 cut(s)	597, 643
BseGI	GGATG	8 cut(s)	15, 217, 337, 561, 1049, 1090, 1633, 2085
BseJI	GATNNNNATC	1 cut(s)	153
BseLI	CCNNNNNNNGG	5 cut(s)	190, 584, 1112, 1149, 1427
BseMI	GCAATG	3 cut(s)	777, 984, 1982
BseMII	CTCAG	5 cut(s)	1314, 1745, 1935, 1989, 2022
BseNI	ACTGG	2 cut(s)	945, 1143
BseRI	GAGGAG	2 cut(s)	356, 1017
BseXI	GCAGC	2 cut(s)	518, 944
BsgI	GTGCAG	1 cut(s)	1379
Bsh1285I	CGRYCG	1 cut(s)	157
BshFI	GGCC	5 cut(s)	350, 641, 1284, 1364, 1458
BshNI	GGYRCC	2 cut(s)	80, 559
BsiEI	CGRYCG	1 cut(s)	157
BsiSI	CCGG	2 cut(s)	184, 329
BslI	CCNNNNNNNGG	5 cut(s)	190, 584, 1112, 1149, 1427
BsmAI	GTCTC	2 cut(s)	793, 2113
BsmI	GAATGC	3 cut(s)	709, 1235, 2110
BsnI	GGCC	5 cut(s)	350, 641, 1284, 1364, 1458
Bso31I	GGTCTC	1 cut(s)	793
Bsp13I	TCCGGA	2 cut(s)	183, 328
Bsp143I	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
Bsp19I	CCATGG	1 cut(s)	643
BspACI	CCGC	1 cut(s)	461
BspANI	GGCC	5 cut(s)	350, 641, 1284, 1364, 1458
BspCNI	CTCAG	5 cut(s)	1315, 1746, 1936, 1990, 2023
BspEI	TCCGGA	2 cut(s)	183, 328
BspHI	TCATGA	2 cut(s)	312, 690
BspLI	GGNNCC	3 cut(s)	82, 561, 1457
BspMAI	CTGCAG	1 cut(s)	2026
BspMI	ACCTGC	1 cut(s)	1855
BspOI	GCTAGC	1 cut(s)	1770
BspPI	GGATC	4 cut(s)	156, 1260, 1701, 1753
BspT107I	GGYRCC	2 cut(s)	80, 559
BspTI	CTTAAG	1 cut(s)	365
BspTNI	GGTCTC	1 cut(s)	793
BsrDI	GCAATG	3 cut(s)	777, 984, 1982
BsrI	ACTGG	2 cut(s)	945, 1143
BssECI	CCNNGG	2 cut(s)	597, 643
BssMI	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
BssNI	GRCGYC	1 cut(s)	81
BssT1I	CCWWGG	2 cut(s)	597, 643
Bst2UI	CCWGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
Bst4CI	ACNGT	6 cut(s)	94, 522, 731, 1357, 1580, 1723
Bst6I	CTCTTC	1 cut(s)	60
BstACI	GRCGYC	1 cut(s)	81
BstAFI	CTTAAG	1 cut(s)	365
BstDEI	CTNAG	6 cut(s)	747, 1323, 1754, 1944, 1998, 2031
BstDSI	CCRYGG	1 cut(s)	643
BstF5I	GGATG	8 cut(s)	15, 217, 337, 561, 1049, 1090, 1633, 2085
BstH2I	RGCGCY	1 cut(s)	84
BstHHI	GCGC	3 cut(s)	83, 89, 196
BstKTI	GATC	9 cut(s)	108, 151, 157, 217, 276, 790, 1255, 1696, 1748
BstMAI	GTCTC	2 cut(s)	793, 2113
BstMBI	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
BstMCI	CGRYCG	1 cut(s)	157
BstMWI	GCNNNNNNNGC	5 cut(s)	941, 1366, 1955, 2047, 2140
BstNI	CCWGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
BstNSI	RCATGY	2 cut(s)	499, 845
BstPAI	GACNNNNGTC	1 cut(s)	520
BstSCI	CCNGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
BstSFI	CTRYAG	1 cut(s)	2022
BstV1I	GCAGC	2 cut(s)	518, 944
BstV2I	GAAGAC	1 cut(s)	1310
BstX2I	RGATCY	3 cut(s)	148, 1252, 1693
BstXI	CCANNNNNNTGG	1 cut(s)	897
BstYI	RGATCY	3 cut(s)	148, 1252, 1693
BsuI	GTATCC	1 cut(s)	581
BsuRI	GGCC	5 cut(s)	350, 641, 1284, 1364, 1458
BtgI	CCRYGG	1 cut(s)	643
BtsCI	GGATG	8 cut(s)	15, 217, 337, 561, 1049, 1090, 1633, 2085
BtsIMutI	CAGTG	2 cut(s)	1547, 1680
BveI	ACCTGC	1 cut(s)	1855
CaiI	CAGNNNCTG	1 cut(s)	2030
CciI	TCATGA	2 cut(s)	312, 690
CfoI	GCGC	3 cut(s)	83, 89, 196
Cfr13I	GGNCC	4 cut(s)	640, 1409, 1456, 1544
CseI	GACGC	1 cut(s)	1323
CsiI	ACCWGGT	1 cut(s)	1420
Csp6I	GTAC	5 cut(s)	994, 1520, 1719, 1724, 1844
CviAII	CATG	7 cut(s)	277, 313, 496, 644, 650, 691, 842
CviQI	GTAC	5 cut(s)	994, 1520, 1719, 1724, 1844
DdeI	CTNAG	6 cut(s)	747, 1323, 1754, 1944, 1998, 2031
DinI	GGCGCC	1 cut(s)	82
DpnI	GATC	9 cut(s)	107, 150, 156, 216, 275, 789, 1254, 1695, 1747
DpnII	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
DraI	TTTAAA	4 cut(s)	757, 948, 1038, 1102
DraIII	CACNNNGTG	2 cut(s)	989, 1424
DriI	GACNNNNNGTC	1 cut(s)	610
EaeI	YGGCCR	2 cut(s)	348, 1282
Eam1104I	CTCTTC	1 cut(s)	60
Eam1105I	GACNNNNNGTC	1 cut(s)	610
EarI	CTCTTC	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	597, 643
Eco31I	GGTCTC	1 cut(s)	793
Eco32I	GATATC	1 cut(s)	181
Eco47I	GGWCC	2 cut(s)	1409, 1544
Eco57I	CTGAAG	2 cut(s)	1554, 1856
EcoRII	CCWGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
EcoRV	GATATC	1 cut(s)	181
EcoT14I	CCWWGG	2 cut(s)	597, 643
EgeI	GGCGCC	1 cut(s)	82
EheI	GGCGCC	1 cut(s)	82
ErhI	CCWWGG	2 cut(s)	597, 643
FaeI	CATG	7 cut(s)	280, 316, 499, 647, 653, 694, 845
FalI	AAGNNNNNCTT	2 cut(s)	517, 549
FatI	CATG	7 cut(s)	276, 312, 495, 643, 649, 690, 841
FbaI	TGATCA	1 cut(s)	273
FblI	GTMKAC	1 cut(s)	1337
Fnu4HI	GCNGC	2 cut(s)	507, 933
FokI	GGATG	8 cut(s)	22, 204, 344, 568, 1036, 1097, 1640, 2092
Fsp4HI	GCNGC	2 cut(s)	507, 933
FspBI	CTAG	2 cut(s)	1131, 1767
GlaI	GCGC	3 cut(s)	82, 88, 195
GluI	GCNGC	2 cut(s)	507, 933
GsuI	CTGGAG	5 cut(s)	696, 837, 902, 1626, 1777
HaeII	RGCGCY	1 cut(s)	84
HaeIII	GGCC	5 cut(s)	350, 641, 1284, 1364, 1458
HapII	CCGG	2 cut(s)	184, 329
HgaI	GACGC	1 cut(s)	1323
HhaI	GCGC	3 cut(s)	83, 89, 196
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	7 cut(s)	280, 316, 499, 647, 653, 694, 845
Hin6I	GCGC	3 cut(s)	81, 87, 194
HinP1I	GCGC	3 cut(s)	81, 87, 194
HincII	GTYRAC	1 cut(s)	1818
HindII	GTYRAC	1 cut(s)	1818
HindIII	AAGCTT	3 cut(s)	56, 467, 1534
HpaII	CCGG	2 cut(s)	184, 329
HphI	GGTGA	7 cut(s)	283, 475, 1127, 1220, 1740, 1787, 1859
Hpy166II	GTNNAC	6 cut(s)	97, 391, 879, 1338, 1547, 1818
Hpy8I	GTNNAC	6 cut(s)	97, 391, 879, 1338, 1547, 1818
Hpy99I	CGWCG	3 cut(s)	134, 1527, 1734
HpyAV	CCTTC	4 cut(s)	404, 421, 673, 1880
HpyCH4III	ACNGT	6 cut(s)	94, 522, 731, 1357, 1580, 1723
HpyCH4IV	ACGT	3 cut(s)	1026, 1842, 1892
HpyF10VI	GCNNNNNNNGC	5 cut(s)	941, 1366, 1955, 2047, 2140
HpyF3I	CTNAG	6 cut(s)	747, 1323, 1754, 1944, 1998, 2031
HpySE526I	ACGT	3 cut(s)	1026, 1842, 1892
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	7 cut(s)	280, 316, 499, 647, 653, 694, 845
HspAI	GCGC	3 cut(s)	81, 87, 194
KasI	GGCGCC	1 cut(s)	80
Kpn2I	TCCGGA	2 cut(s)	183, 328
Ksp22I	TGATCA	1 cut(s)	273
Kzo9I	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
LmnI	GCTCC	4 cut(s)	15, 1594, 2038, 2065
Lsp1109I	GCAGC	2 cut(s)	518, 944
LweI	GCATC	5 cut(s)	919, 1047, 1058, 1542, 1859
MabI	ACCWGGT	1 cut(s)	1420
MaeI	CTAG	2 cut(s)	1131, 1767
MaeII	ACGT	3 cut(s)	1026, 1842, 1892
MaeIII	GTNAC	3 cut(s)	981, 1675, 1974
MalI	GATC	9 cut(s)	107, 150, 156, 216, 275, 789, 1254, 1695, 1747
MboI	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
MboII	GAAGA	6 cut(s)	77, 677, 1100, 1315, 1593, 1728
MfeI	CAATTG	1 cut(s)	2129
MflI	RGATCY	3 cut(s)	148, 1252, 1693
MlsI	TGGCCA	1 cut(s)	1284
MluNI	TGGCCA	1 cut(s)	1284
Mly113I	GGCGCC	1 cut(s)	81
MlyI	GAGTC	2 cut(s)	353, 1784
MmeI	TCCRAC	2 cut(s)	52, 612
Mox20I	TGGCCA	1 cut(s)	1284
MroI	TCCGGA	2 cut(s)	183, 328
MscI	TGGCCA	1 cut(s)	1284
MseI	TTAA	9 cut(s)	209, 366, 756, 821, 924, 947, 1037, 1101, 1235
MslI	CAYNNNNRTG	3 cut(s)	222, 420, 648
Msp20I	TGGCCA	1 cut(s)	1284
MspA1I	CMGCKG	2 cut(s)	509, 1943
MspCI	CTTAAG	1 cut(s)	365
MspI	CCGG	2 cut(s)	184, 329
MspR9I	CCNGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
MunI	CAATTG	1 cut(s)	2129
Mva1269I	GAATGC	3 cut(s)	709, 1235, 2110
MvaI	CCWGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
MwoI	GCNNNNNNNGC	5 cut(s)	941, 1366, 1955, 2047, 2140
NarI	GGCGCC	1 cut(s)	81
NcoI	CCATGG	1 cut(s)	643
NdeII	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
NheI	GCTAGC	1 cut(s)	1766
NlaIII	CATG	7 cut(s)	280, 316, 499, 647, 653, 694, 845
NlaIV	GGNNCC	3 cut(s)	82, 561, 1457
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	2 cut(s)	981, 1675
NspI	RCATGY	2 cut(s)	499, 845
PaeI	GCATGC	1 cut(s)	845
PagI	TCATGA	2 cut(s)	312, 690
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	3 cut(s)	709, 1235, 2110
PfeI	GAWTC	9 cut(s)	40, 901, 1172, 1214, 1274, 1313, 1619, 1876, 1897
PflFI	GACNNNGTC	1 cut(s)	1434
PflMI	CCANNNNNTGG	1 cut(s)	584
PfoI	TCCNGGA	1 cut(s)	712
PkrI	GCNGC	2 cut(s)	508, 934
Ple19I	CGATCG	1 cut(s)	157
PleI	GAGTC	2 cut(s)	352, 1784
PluTI	GGCGCC	1 cut(s)	84
PpsI	GAGTC	2 cut(s)	352, 1784
PshAI	GACNNNNGTC	1 cut(s)	520
PshBI	ATTAAT	1 cut(s)	209
Psp6I	CCWGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
PspGI	CCWGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
PspN4I	GGNNCC	3 cut(s)	82, 561, 1457
PspPI	GGNCC	4 cut(s)	640, 1409, 1456, 1544
PstI	CTGCAG	1 cut(s)	2026
PstNI	CAGNNNCTG	1 cut(s)	2030
PsuI	RGATCY	3 cut(s)	148, 1252, 1693
PsyI	GACNNNGTC	1 cut(s)	1434
PvuI	CGATCG	1 cut(s)	157
PvuII	CAGCTG	2 cut(s)	509, 1943
RsaI	GTAC	5 cut(s)	995, 1521, 1720, 1725, 1845
RsaNI	GTAC	5 cut(s)	994, 1520, 1719, 1724, 1844
RseI	CAYNNNNRTG	3 cut(s)	222, 420, 648
SaqAI	TTAA	9 cut(s)	209, 366, 756, 821, 924, 947, 1037, 1101, 1235
SatI	GCNGC	2 cut(s)	507, 933
Sau3AI	GATC	9 cut(s)	105, 148, 154, 214, 273, 787, 1252, 1693, 1745
Sau96I	GGNCC	4 cut(s)	640, 1409, 1456, 1544
SchI	GAGTC	2 cut(s)	353, 1784
ScrFI	CCNGG	6 cut(s)	579, 714, 1015, 1422, 1795, 2077
SexAI	ACCWGGT	1 cut(s)	1420
SfaNI	GCATC	5 cut(s)	919, 1047, 1058, 1542, 1859
SfcI	CTRYAG	1 cut(s)	2022
SfoI	GGCGCC	1 cut(s)	82
SinI	GGWCC	2 cut(s)	1409, 1544
SmiMI	CAYNNNNRTG	3 cut(s)	222, 420, 648
SmlI	CTYRAG	4 cut(s)	365, 377, 1044, 2089
SmoI	CTYRAG	4 cut(s)	365, 377, 1044, 2089
SpeI	ACTAGT	1 cut(s)	1130
SphI	GCATGC	1 cut(s)	845
SsiI	CCGC	1 cut(s)	461
SspDI	GGCGCC	1 cut(s)	80
SspMI	CTAG	2 cut(s)	1131, 1767
StyD4I	CCNGG	6 cut(s)	577, 712, 1013, 1420, 1793, 2075
StyI	CCWWGG	2 cut(s)	597, 643
TaaI	ACNGT	6 cut(s)	94, 522, 731, 1357, 1580, 1723
TaiI	ACGT	3 cut(s)	1029, 1845, 1895
TaqI	TCGA	5 cut(s)	23, 153, 174, 1564, 1715
TatI	WGTACW	1 cut(s)	1718
TfiI	GAWTC	9 cut(s)	40, 901, 1172, 1214, 1274, 1313, 1619, 1876, 1897
Tru1I	TTAA	9 cut(s)	209, 366, 756, 821, 924, 947, 1037, 1101, 1235
Tru9I	TTAA	9 cut(s)	209, 366, 756, 821, 924, 947, 1037, 1101, 1235
TscAI	CASTG	2 cut(s)	1554, 1680
TseFI	GTSAC	2 cut(s)	981, 1675
TseI	GCWGC	2 cut(s)	506, 932
Tsp45I	GTSAC	2 cut(s)	981, 1675
TspGWI	ACGGA	1 cut(s)	896
TspRI	CASTG	2 cut(s)	1554, 1680
Tth111I	GACNNNGTC	1 cut(s)	1434
Van91I	CCANNNNNTGG	1 cut(s)	584
Vha464I	CTTAAG	1 cut(s)	365
VpaK11BI	GGWCC	2 cut(s)	1409, 1544
VspI	ATTAAT	1 cut(s)	209
XapI	RAATTY	3 cut(s)	1097, 1687, 1918
XceI	RCATGY	2 cut(s)	499, 845
XmiI	GTMKAC	1 cut(s)	1337
XspI	CTAG	2 cut(s)	1131, 1767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.