Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003602

Physical Location & Seq

Genomic Coordinates Forward (+)

5794205 .. 5800375

Gene Structure 6171 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG079900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGGGAGGATGGGAGGTAATTCCAGAACTTACTCGGCTAATTCCAGCGATTATAAGCTTCTTGAAGAGGTTGGATATGGTGCGAGCGCTACTGTTTATAGAGCGATCTATCTCCCTTTCAATGAAGTCGTCGCGGTCAAATGCTTGGATCTTGATCGTTGCAATAACAATTTTGATGACATACGTAGGGAGACGCAAACAATGCACTTGATAGATCATCCAAATGTTGTAAGGTCGTATTGTTCATTTGTGGTGGAACGGAACCTTTGGGTGGTCATGCCATTTATGGCTGAGGGTTCTTGTCTGCATCTCATGAAGATTGCGTATCCAGATGGGTTTGAGGAGGCTGCAATTGGTTCTGTTTTGAAGGAAACCCTTAAGGCTTTGGTTTACCTTCACAAACAAGGTCATATTCATCGAGATGTTAAGGCTGGAAACATATTACTTGATACTAATGGGATGGTGAAGCTTGCTGACTTTGGTGTTTCAGCTTGCATGTTTGATGCAGGTGATAGACAAAGGTCAAGAAATACTTTTGTAGGAACACCATGCTGGATGGCACCAGAGGTACTGCAACCAGGAAATGGATACAATTCCAAGGCCGACATTTGGTCATTTGGTATAACGGCATTGGAGTTGGCACATGGTCATGCACCATTTTCAAAATATCCTCCCATGAAGGTTCTCCTCATGACCATACAGAATGCCCCTCCTGGACTTGATTATGACCGCGATAAAAAGTTCTCCAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTCGTAAAAGATCAAACCAAGAGACCAACAGCAGAAAAATTGTTGAAACACTCCTTTTTCAAGACTGCAAAACCTCCGGAGCTTTCTCTTAAGAAATTGTTTACAGACCTGCCACCACTTTGGAATCGTGTCAAAGCCCTCCAGCTTAAAGATGCAGCACAATTGGCTTTGAAGAGAATGCCTTCAGCAGAGCAAGAGGCAATGTCACAGAGTGAGTACCAGCGAGGTGTTAGCGCTTGGAACTTTGACGTTGAGGATTTAAAAGCTCAAGCATCCATGGTGCGAGATGATGATGATGATGATGATGATTTTTCGGAAATGATTGACACAGACGAAAAATCGAAATCCGTTTTTAGTTATAAGGTTGCAACTGATTGGAAATCCAGTTTGGGGAAGTCGAATGAAAATAATGAACCACCTTGGACTGATCGCAAAAGTGAAGTAAATGGTGATGACTCACAACAGGTTGAATGCGTGAACAGAAAGGACAAGCATCATGAAAGTGAAACATTGGAATCTGGTGGTCAACAAGGGACAGACTGGAAGAAAAATGGATCAAGCTCTGAAGCAACAGCGTCTACATCAGAAACAGACATGGTACAGGCCAAGTCTAGAATTGTAGCTGTGAAAAGTCGTCAAACGCGGAGTGGGCCGCTCACGCCTGGTGGTGTGCTTAATCATTCTTTATCGGAGACGGGACGCAGTTTTGAAAGGAATGAGAATGAAAACCAACAAGCTATCGAGAAAGCTAAATGTGAAGTAAGACGAACTCCAAGCTTTAGTGGTCCACTGATGCTCCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCTATAAAATCTTCAGGAGGGTATAGAGATTCTTTGGATGACAAGTCAAAGGCTAATCTGGTGCAAATAAAAGGGCGGTTCTCAGTGACATCAGAAAATTTAGATCTTGTAAAGGATATTCCATCAAGTACAGCACTACGTCGATCTTCGCAGGGATCACCTCTAAGAAAGTCTGCAAGCGTTGGTGATTGGGTATTTGAATCTAGGCAAATGCCTGTCAGTTCTCCCAAGGAGTTGAACAACAGCAGCAACGTTCCTGCATCACTTCTCCTCCCTCACCTTCAGAATCTTTTTCAGCAGACATCAATTCAACAGGATATTATTGCGAACTTGCTGAGTAGCTTGCAACCAGCTGAGGCAGTAGAGGCTACCCAAAATGGAAAGTTGCCTCCACTGCCCCGCAGTTCCGAGAACAATGGAAATGTGGAACCTGCAGTTTCTGAGAGGGAGCGGTTACTGCTCCTCAAGGTCACGGAGCTTCAATCAAGGATGAACAACTTGAATGATGAACTGACTGCTGAAAAAATGAGACACATTCAATTGCAACAACAGCTAAATGCTGCATCTGAGCAAGAAGTAAATGGGGACAGAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

734

Amino Acids

81.73

Weight (kDa)

6.44

Isoelectric Point (pI)

49.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	18 - 279	2.8e-61	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	19 - 275	4.5e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10730 AT4G10730 AT4G24100 AT4G24100 AT4G24100 AT4G24100
fragaria_vesca	FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990 FvH4_5g10990
malus_domestica	MD06G1117800.v1.1 MD14G1125200.v1.1
prunus_persica	Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1 Prupe.5G128900_v2.0.a1
pyrus_communis	pycom06g10950
rosa_chinensis	RchiOBHm_Chr7g0186821
rosa_laevigata	RLG00000004812
rosa_multiflora	Rmu_sc0022028.1_g000001 Rmu_ssc0000024.1_g000040
rosa_roxburghii	Rroxscaffold_3G00267790
rosa_rugosa	Rorug06G0477000 Rorug06G0477100 Rorug06G0477200 Rorug06G0477300
rosa_samantha	Rh4AG189200 Rh4AG190000 Rh7AG063500 Rh7BG079900 Rh7CG084000 Rh7DG084900
rosa_wichuraiana	Rw7G007290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	54, 1137
AarI	CACCTGC	1 cut(s)	497
Acc36I	ACCTGC	3 cut(s)	497, 894, 2047
AccB1I	GGYRCC	1 cut(s)	559
AccB7I	CCANNNNNTGG	1 cut(s)	584
AccBSI	CCGCTC	2 cut(s)	1432, 2059
AccI	GTMKAC	1 cut(s)	1355
AccII	CGCG	3 cut(s)	134, 732, 1420
AccIII	TCCGGA	1 cut(s)	853
AciI	CCGC	7 cut(s)	134, 730, 1420, 1430, 1684, 2008, 2059
AclI	AACGTT	1 cut(s)	1860
AclWI	GGATC	3 cut(s)	156, 1339, 1771
AcsI	RAATTY	1 cut(s)	1705
AcuI	CTGAAG	5 cut(s)	945, 1362, 1572, 1605, 1874
AdeI	CACNNNGTG	1 cut(s)	989
AfaI	GTAC	4 cut(s)	570, 995, 1377, 1738
AfeI	AGCGCT	2 cut(s)	88, 1012
AfiI	CCNNNNNNNGG	4 cut(s)	271, 584, 609, 1167
AflII	CTTAAG	2 cut(s)	377, 866
AhdI	GACNNNNNGTC	1 cut(s)	610
AjnI	CCWGG	3 cut(s)	577, 712, 1438
AjuI	GAANNNNNNNTTGG	4 cut(s)	1148, 1180, 1570, 1602
Alw26I	GTCTC	4 cut(s)	185, 793, 1463, 2131
AlwI	GGATC	3 cut(s)	156, 1339, 1771
AlwNI	CAGNNNCTG	1 cut(s)	2048
Aor13HI	TCCGGA	1 cut(s)	853
Aor51HI	AGCGCT	2 cut(s)	88, 1012
AoxI	GGCC	3 cut(s)	600, 1380, 1427
ApeKI	GCWGC	4 cut(s)	347, 932, 1854, 2168
ApoI	RAATTY	1 cut(s)	1705
Asp700I	GAANNNNTTC	1 cut(s)	958
AspLEI	GCGC	2 cut(s)	89, 1013
AspS9I	GGNCC	2 cut(s)	1427, 1562
AsuHPI	GGTGA	6 cut(s)	475, 521, 1238, 1758, 1805, 1877
AvaII	GGWCC	1 cut(s)	1562
BanI	GGYRCC	1 cut(s)	559
BbvCI	CCTCAGC	2 cut(s)	291, 1962
BbvI	GCAGC	4 cut(s)	334, 944, 1866, 2155
BccI	CCATC	5 cut(s)	4, 326, 454, 550, 1738
BceAI	ACGGC	1 cut(s)	642
BciT130I	CCWGG	3 cut(s)	579, 714, 1440
BciVI	GTATCC	2 cut(s)	336, 581
BcoDI	GTCTC	4 cut(s)	185, 793, 1463, 2131
BfaI	CTAG	2 cut(s)	1389, 1812
BfmI	CTRYAG	1 cut(s)	2040
BfoI	RGCGCY	2 cut(s)	90, 1014
BfrI	CTTAAG	2 cut(s)	377, 866
BfuAI	ACCTGC	3 cut(s)	497, 894, 2047
BfuI	GTATCC	2 cut(s)	336, 581
BglII	AGATCT	1 cut(s)	1711
BisI	GCNGC	5 cut(s)	348, 933, 1430, 1855, 2169
BlsI	GCNGC	5 cut(s)	349, 934, 1431, 1856, 2170
Bme1390I	CCNGG	3 cut(s)	579, 714, 1440
Bme18I	GGWCC	1 cut(s)	1562
BmeRI	GACNNNNNGTC	1 cut(s)	610
BmgT120I	GGNCC	2 cut(s)	1427, 1562
BmiI	GGNNCC	3 cut(s)	263, 561, 2037
BmrFI	CCNGG	3 cut(s)	579, 714, 1440
BmsI	GCATC	8 cut(s)	316, 493, 919, 1058, 1279, 1560, 1877, 2180
BoxI	GACNNNNGTC	1 cut(s)	520
BpmI	CTGGAG	1 cut(s)	902
Bpu10I	CCTNAGC	2 cut(s)	291, 1962
BpuEI	CTTGAG	2 cut(s)	1029, 2057
BsaAI	YACGTR	1 cut(s)	185
BsaBI	GATNNNNATC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	793
BsaJI	CCNNGG	4 cut(s)	597, 1053, 1196, 1836
BsaWI	WCCGGW	1 cut(s)	853
BsaXI	ACNNNNNCTCC	4 cut(s)	1557, 1587, 1863, 1893
Bsc4I	CCNNNNNNNGG	4 cut(s)	271, 584, 609, 1167
Bse1I	ACTGG	2 cut(s)	1161, 1322
Bse3DI	GCAATG	2 cut(s)	777, 984
Bse8I	GATNNNNATC	1 cut(s)	153
BseAI	TCCGGA	1 cut(s)	853
BseBI	CCWGG	3 cut(s)	579, 714, 1440
BseDI	CCNNGG	4 cut(s)	597, 1053, 1196, 1836
BseGI	GGATG	7 cut(s)	15, 217, 465, 561, 1049, 1651, 2103
BseJI	GATNNNNATC	1 cut(s)	153
BseLI	CCNNNNNNNGG	4 cut(s)	271, 584, 609, 1167
BseMI	GCAATG	2 cut(s)	777, 984
BseMII	CTCAG	6 cut(s)	282, 1704, 1934, 1953, 2040, 2166
BseNI	ACTGG	2 cut(s)	1161, 1322
BseRI	GAGGAG	4 cut(s)	356, 677, 1868, 2060
BseXI	GCAGC	4 cut(s)	334, 944, 1866, 2155
Bsh1236I	CGCG	3 cut(s)	134, 732, 1420
BshFI	GGCC	3 cut(s)	602, 1382, 1429
BshNI	GGYRCC	1 cut(s)	559
BsiSI	CCGG	1 cut(s)	854
BslFI	GGGAC	2 cut(s)	1324, 1488
BslI	CCNNNNNNNGG	4 cut(s)	271, 584, 609, 1167
BsmAI	GTCTC	4 cut(s)	185, 793, 1463, 2131
BsmBI	CGTCTC	2 cut(s)	185, 1463
BsmFI	GGGAC	2 cut(s)	1324, 1488
BsmI	GAATGC	3 cut(s)	709, 960, 1253
BsnI	GGCC	3 cut(s)	602, 1382, 1429
Bso31I	GGTCTC	1 cut(s)	793
Bsp13I	TCCGGA	1 cut(s)	853
Bsp19I	CCATGG	1 cut(s)	1053
BspACI	CCGC	7 cut(s)	134, 730, 1420, 1430, 1684, 2008, 2059
BspANI	GGCC	3 cut(s)	602, 1382, 1429
BspCNI	CTCAG	6 cut(s)	283, 1703, 1935, 1954, 2041, 2167
BspEI	TCCGGA	1 cut(s)	853
BspFNI	CGCG	3 cut(s)	134, 732, 1420
BspHI	TCATGA	3 cut(s)	312, 690, 1273
BspLI	GGNNCC	3 cut(s)	263, 561, 2037
BspMAI	CTGCAG	1 cut(s)	2044
BspMI	ACCTGC	3 cut(s)	497, 894, 2047
BspPI	GGATC	3 cut(s)	156, 1339, 1771
BspT107I	GGYRCC	1 cut(s)	559
BspTI	CTTAAG	2 cut(s)	377, 866
BspTNI	GGTCTC	1 cut(s)	793
BsrBI	CCGCTC	2 cut(s)	1432, 2059
BsrDI	GCAATG	2 cut(s)	777, 984
BsrI	ACTGG	2 cut(s)	1161, 1322
BssECI	CCNNGG	4 cut(s)	597, 1053, 1196, 1836
BssT1I	CCWWGG	4 cut(s)	597, 1053, 1196, 1836
Bst2UI	CCWGG	3 cut(s)	579, 714, 1440
Bst4CI	ACNGT	1 cut(s)	94
Bst6I	CTCTTC	2 cut(s)	60, 944
BstAFI	CTTAAG	2 cut(s)	377, 866
BstAPI	GCANNNNNTGC	1 cut(s)	202
BstBAI	YACGTR	1 cut(s)	185
BstC8I	GCNNGC	5 cut(s)	85, 471, 493, 1786, 1952
BstDEI	CTNAG	7 cut(s)	291, 1690, 1772, 1943, 1962, 2049, 2175
BstDSI	CCRYGG	1 cut(s)	1053
BstF5I	GGATG	7 cut(s)	15, 217, 465, 561, 1049, 1651, 2103
BstFNI	CGCG	3 cut(s)	134, 732, 1420
BstH2I	RGCGCY	2 cut(s)	90, 1014
BstHHI	GCGC	2 cut(s)	89, 1013
BstMAI	GTCTC	4 cut(s)	185, 793, 1463, 2131
BstMWI	GCNNNNNNNGC	8 cut(s)	202, 941, 1426, 1435, 1973, 2002, 2065, 2158
BstNI	CCWGG	3 cut(s)	579, 714, 1440
BstNSI	RCATGY	1 cut(s)	499
BstPAI	GACNNNNGTC	1 cut(s)	520
BstSCI	CCNGG	3 cut(s)	577, 712, 1438
BstSFI	CTRYAG	1 cut(s)	2040
BstSNI	TACGTA	1 cut(s)	185
BstUI	CGCG	3 cut(s)	134, 732, 1420
BstV1I	GCAGC	4 cut(s)	334, 944, 1866, 2155
BstX2I	RGATCY	2 cut(s)	148, 1711
BstXI	CCANNNNNNTGG	1 cut(s)	897
BstYI	RGATCY	2 cut(s)	148, 1711
BsuI	GTATCC	2 cut(s)	336, 581
BsuRI	GGCC	3 cut(s)	602, 1382, 1429
BtgI	CCRYGG	1 cut(s)	1053
BtsCI	GGATG	7 cut(s)	15, 217, 465, 561, 1049, 1651, 2103
BtsI	GCAGTG	1 cut(s)	2000
BtsIMutI	CAGTG	3 cut(s)	1565, 1698, 2000
BveI	ACCTGC	3 cut(s)	497, 894, 2047
Cac8I	GCNNGC	5 cut(s)	85, 471, 493, 1786, 1952
CaiI	CAGNNNCTG	1 cut(s)	2048
CciI	TCATGA	3 cut(s)	312, 690, 1273
CfoI	GCGC	2 cut(s)	89, 1013
Cfr13I	GGNCC	2 cut(s)	1427, 1562
CseI	GACGC	3 cut(s)	202, 1341, 1485
Csp6I	GTAC	4 cut(s)	569, 994, 1376, 1737
CviQI	GTAC	4 cut(s)	569, 994, 1376, 1737
DdeI	CTNAG	7 cut(s)	291, 1690, 1772, 1943, 1962, 2049, 2175
DraI	TTTAAA	2 cut(s)	757, 1038
DraIII	CACNNNGTG	1 cut(s)	989
DriI	GACNNNNNGTC	1 cut(s)	610
Eam1104I	CTCTTC	2 cut(s)	60, 944
Eam1105I	GACNNNNNGTC	1 cut(s)	610
EarI	CTCTTC	2 cut(s)	60, 944
Eco105I	TACGTA	1 cut(s)	185
Eco130I	CCWWGG	4 cut(s)	597, 1053, 1196, 1836
Eco31I	GGTCTC	1 cut(s)	793
Eco47I	GGWCC	1 cut(s)	1562
Eco47III	AGCGCT	2 cut(s)	88, 1012
Eco57I	CTGAAG	5 cut(s)	945, 1362, 1572, 1605, 1874
EcoRII	CCWGG	3 cut(s)	577, 712, 1438
EcoT14I	CCWWGG	4 cut(s)	597, 1053, 1196, 1836
ErhI	CCWWGG	4 cut(s)	597, 1053, 1196, 1836
Esp3I	CGTCTC	2 cut(s)	185, 1463
FalI	AAGNNNNNCTT	2 cut(s)	517, 549
FaqI	GGGAC	2 cut(s)	1324, 1488
FauI	CCCGC	1 cut(s)	2015
FblI	GTMKAC	1 cut(s)	1355
Fnu4HI	GCNGC	5 cut(s)	348, 933, 1430, 1855, 2169
FokI	GGATG	7 cut(s)	22, 204, 472, 568, 1036, 1658, 2110
Fsp4HI	GCNGC	5 cut(s)	348, 933, 1430, 1855, 2169
FspBI	CTAG	2 cut(s)	1389, 1812
GlaI	GCGC	2 cut(s)	88, 1012
GluI	GCNGC	5 cut(s)	348, 933, 1430, 1855, 2169
GsuI	CTGGAG	1 cut(s)	902
HaeII	RGCGCY	2 cut(s)	90, 1014
HaeIII	GGCC	3 cut(s)	602, 1382, 1429
HapII	CCGG	1 cut(s)	854
HgaI	GACGC	3 cut(s)	202, 1341, 1485
HhaI	GCGC	2 cut(s)	89, 1013
Hin6I	GCGC	2 cut(s)	87, 1011
HinP1I	GCGC	2 cut(s)	87, 1011
HincII	GTYRAC	1 cut(s)	1304
HindII	GTYRAC	1 cut(s)	1304
HindIII	AAGCTT	3 cut(s)	56, 467, 1552
HinfI	GANTC	6 cut(s)	901, 1232, 1292, 1637, 1808, 1894
HpaII	CCGG	1 cut(s)	854
HphI	GGTGA	6 cut(s)	475, 521, 1238, 1758, 1805, 1877
Hpy166II	GTNNAC	6 cut(s)	391, 879, 1255, 1304, 1356, 1565
Hpy188I	TCNGA	9 cut(s)	1093, 1342, 1363, 1468, 1702, 1893, 2017, 2050, 2176
Hpy8I	GTNNAC	6 cut(s)	391, 879, 1255, 1304, 1356, 1565
Hpy99I	CGWCG	2 cut(s)	134, 1752
HpyAV	CCTTC	5 cut(s)	361, 404, 673, 969, 1898
HpyCH4III	ACNGT	1 cut(s)	94
HpyCH4IV	ACGT	4 cut(s)	184, 1026, 1747, 1860
HpyF10VI	GCNNNNNNNGC	8 cut(s)	202, 941, 1426, 1435, 1973, 2002, 2065, 2158
HpyF3I	CTNAG	7 cut(s)	291, 1690, 1772, 1943, 1962, 2049, 2175
HpySE526I	ACGT	4 cut(s)	184, 1026, 1747, 1860
HspAI	GCGC	2 cut(s)	87, 1011
Kpn2I	TCCGGA	1 cut(s)	853
LmnI	GCTCC	6 cut(s)	856, 1578, 1612, 2056, 2073, 2083
Lsp1109I	GCAGC	4 cut(s)	334, 944, 1866, 2155
LweI	GCATC	8 cut(s)	316, 493, 919, 1058, 1279, 1560, 1877, 2180
MaeI	CTAG	2 cut(s)	1389, 1812
MaeII	ACGT	4 cut(s)	184, 1026, 1747, 1860
MaeIII	GTNAC	4 cut(s)	981, 1693, 2061, 2077
MbiI	CCGCTC	2 cut(s)	1432, 2059
MboII	GAAGA	6 cut(s)	77, 328, 961, 1333, 1611, 1746
MfeI	CAATTG	3 cut(s)	351, 938, 2147
MflI	RGATCY	2 cut(s)	148, 1711
MlyI	GAGTC	1 cut(s)	1226
MmeI	TCCRAC	1 cut(s)	52
MroI	TCCGGA	1 cut(s)	853
MroXI	GAANNNNTTC	1 cut(s)	958
MseI	TTAA	7 cut(s)	378, 426, 756, 867, 924, 1037, 1452
MslI	CAYNNNNRTG	4 cut(s)	222, 420, 648, 1278
MspA1I	CMGCKG	1 cut(s)	1961
MspCI	CTTAAG	2 cut(s)	377, 866
MspI	CCGG	1 cut(s)	854
MspR9I	CCNGG	3 cut(s)	579, 714, 1440
MunI	CAATTG	3 cut(s)	351, 938, 2147
Mva1269I	GAATGC	3 cut(s)	709, 960, 1253
MvaI	CCWGG	3 cut(s)	579, 714, 1440
MvnI	CGCG	3 cut(s)	134, 732, 1420
MwoI	GCNNNNNNNGC	8 cut(s)	202, 941, 1426, 1435, 1973, 2002, 2065, 2158
NcoI	CCATGG	1 cut(s)	1053
NlaIV	GGNNCC	3 cut(s)	263, 561, 2037
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	981, 1693, 2077
NspI	RCATGY	1 cut(s)	499
PagI	TCATGA	3 cut(s)	312, 690, 1273
PaqCI	CACCTGC	1 cut(s)	497
PctI	GAATGC	3 cut(s)	709, 960, 1253
PdmI	GAANNNNTTC	1 cut(s)	958
PfeI	GAWTC	5 cut(s)	901, 1292, 1637, 1808, 1894
PflMI	CCANNNNNTGG	1 cut(s)	584
PfoI	TCCNGGA	1 cut(s)	712
PkrI	GCNGC	5 cut(s)	349, 934, 1431, 1856, 2170
PleI	GAGTC	1 cut(s)	1226
PpsI	GAGTC	1 cut(s)	1226
Ppu21I	YACGTR	1 cut(s)	185
PshAI	GACNNNNGTC	1 cut(s)	520
PsiI	TTATAA	2 cut(s)	54, 1137
Psp1406I	AACGTT	1 cut(s)	1860
Psp6I	CCWGG	3 cut(s)	577, 712, 1438
PspGI	CCWGG	3 cut(s)	577, 712, 1438
PspN4I	GGNNCC	3 cut(s)	263, 561, 2037
PspPI	GGNCC	2 cut(s)	1427, 1562
PstI	CTGCAG	1 cut(s)	2044
PstNI	CAGNNNCTG	1 cut(s)	2048
PsuI	RGATCY	2 cut(s)	148, 1711
PvuII	CAGCTG	1 cut(s)	1961
RsaI	GTAC	4 cut(s)	570, 995, 1377, 1738
RsaNI	GTAC	4 cut(s)	569, 994, 1376, 1737
RseI	CAYNNNNRTG	4 cut(s)	222, 420, 648, 1278
SaqAI	TTAA	7 cut(s)	378, 426, 756, 867, 924, 1037, 1452
SatI	GCNGC	5 cut(s)	348, 933, 1430, 1855, 2169
Sau96I	GGNCC	2 cut(s)	1427, 1562
SchI	GAGTC	1 cut(s)	1226
ScrFI	CCNGG	3 cut(s)	579, 714, 1440
SfaNI	GCATC	8 cut(s)	316, 493, 919, 1058, 1279, 1560, 1877, 2180
SfcI	CTRYAG	1 cut(s)	2040
SinI	GGWCC	1 cut(s)	1562
SmiMI	CAYNNNNRTG	4 cut(s)	222, 420, 648, 1278
SmlI	CTYRAG	4 cut(s)	377, 866, 1044, 2072
SmoI	CTYRAG	4 cut(s)	377, 866, 1044, 2072
SnaBI	TACGTA	1 cut(s)	185
SsiI	CCGC	7 cut(s)	134, 730, 1420, 1430, 1684, 2008, 2059
SspMI	CTAG	2 cut(s)	1389, 1812
StyD4I	CCNGG	3 cut(s)	577, 712, 1438
StyI	CCWWGG	4 cut(s)	597, 1053, 1196, 1836
TaaI	ACNGT	1 cut(s)	94
TaiI	ACGT	4 cut(s)	187, 1029, 1750, 1863
TaqI	TCGA	5 cut(s)	418, 1118, 1175, 1518, 1750
TatI	WGTACW	1 cut(s)	1736
TauI	GCSGC	1 cut(s)	1432
TfiI	GAWTC	5 cut(s)	901, 1292, 1637, 1808, 1894
Tru1I	TTAA	7 cut(s)	378, 426, 756, 867, 924, 1037, 1452
Tru9I	TTAA	7 cut(s)	378, 426, 756, 867, 924, 1037, 1452
TscAI	CASTG	3 cut(s)	1572, 1698, 2007
TseFI	GTSAC	3 cut(s)	981, 1693, 2077
TseI	GCWGC	4 cut(s)	347, 932, 1854, 2168
Tsp45I	GTSAC	3 cut(s)	981, 1693, 2077
TspGWI	ACGGA	3 cut(s)	274, 1114, 2096
TspRI	CASTG	3 cut(s)	1572, 1698, 2007
Van91I	CCANNNNNTGG	1 cut(s)	584
Vha464I	CTTAAG	2 cut(s)	377, 866
VpaK11BI	GGWCC	1 cut(s)	1562
XapI	RAATTY	1 cut(s)	1705
XbaI	TCTAGA	1 cut(s)	1388
XceI	RCATGY	1 cut(s)	499
XmiI	GTMKAC	1 cut(s)	1355
XmnI	GAANNNNTTC	1 cut(s)	958
XspI	CTAG	2 cut(s)	1389, 1812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.