Rorug06G0477000

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
59899728 .. 59901972
2245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0477000.1

Sequence Viewer

Length: 1287 bp
ATGAGAAGAAGCGCTTCAACCAAAGCTTTGTTTTTAACCTTCTTCTTCTTCCTCCTAACATGCCTCATTGCAAACTCTGCAACTCACAACATTACTAGAAGAAGTAGCAAAGACAAAACCCACAGAAAGAAGTGTCCTATAACCAGTAGTCTACTCCAGTGTTCGAAAACACCACCGCCACCACCACCAGATTTACCAAACCCACAAAAAGTGCTCTCATTTGCAGACCAAAGGCTTCAAGTGGTATACCCAGTCATTCAAAAATTCAAGTCCATCATCACCTCAGATCCTCTCAACATCACCAAAACTTGGGTAGGATCAGATATATGCAGATACAAAGGCTTCTACTGTGACAATCCACCATACAACTTATCCGCAATCGCGCTAGCCTCCATCGACTTCAATGGCTTCCAACTCGGTGCTTCCTCCCTTGATGGGTTTCTTGATCAGCTCCCTGATATTGCTCTGTTCCATGCAAACTCCAACAACTTTTCCGGCACCATTTCCTCCAAAATTGCCAACCTCTGCTACCTCTATGAGCTTGACATAAGCAACAACTTATTCTCCGGTCCATTCCCAACCGCAGTTCTCGGCATGAACGGCTTAACTTTCTTGGACATAAGGTTCAATTTCTTCACCGGCTCTGTTCCGCCTCAGATTTTCACTCAGGACCTTGATGCTCTCTTCCTCAACAACAACAACTTCATGCAGAGCCTTCCTGATAACCTAGGCAGCTCCCATATAATCCTCCTCACTTTGGCAAACAACAACTTCAATGGCCCTATTCCAAGCAGCATTGCAAAAGCTCTGTCTTCTCTCACTGAAGTTCTGCTTCTCAATAACCAGTTAACAGGTTGTTTGCCTTATGAGCTAGGTTTTTTAAAGGAGGCCATAGTGTTTGATGCTAGCAACAATCAGTTAACTGGTCCGTTACCGTTCTCTTTGGCTTGTCTAGACAAAGTGGAGCAGCTAAGTTTTGCTGGAAACTTATTGTTTGGCTTGGTGCCGGAGGTGATCTGTGATCAGCTGCTGAATTTGGCAAACTTTTCGCTGTCCAATAATTACTTCTTCCATGTTGGTCCAATATGTCAAAGTTTGATCCAGAGAGGACTGCTTGATGTTACTAACAACTGCATTCCTGGTCTTCCATTCCAAAGATCGGTAGAAGAATGTGCAGATTTCTTCGCGTATCCCATGTTCTGTCCGAATATGGGGTCTTATACCTATATTCCCTGCAGTAAGTTTCCTTATACTTCTTTTGTTCATCAAGTGGATCCTACACCTTGA

Protein Analysis

428

Amino Acids

47.31

Weight (kDa)

6.06

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 497, 1003
AccB7I CCANNNNNTGG 1 cut(s) 309
AccI GTMKAC 2 cut(s) 151, 246
AccII CGCG 2 cut(s) 383, 1187
AciI CCGC 4 cut(s) 176, 375, 582, 650
AclWI GGATC 5 cut(s) 281, 325, 1093, 1268, 1281
AcsI RAATTY 2 cut(s) 263, 1033
AcuI CTGAAG 1 cut(s) 843
AfeI AGCGCT 1 cut(s) 13
AfiI CCNNNNNNNGG 5 cut(s) 309, 435, 757, 1159, 1211
AgsI TTSAA 7 cut(s) 18, 239, 260, 268, 403, 628, 775
AjnI CCWGG 1 cut(s) 1138
AjuI GAANNNNNNNTTGG 2 cut(s) 1049, 1081
AloI GAACNNNNNNTCC 2 cut(s) 608, 640
AluBI AGCT 8 cut(s) 26, 451, 541, 735, 806, 871, 970, 1027
AluI AGCT 8 cut(s) 26, 451, 541, 735, 806, 871, 970, 1027
Alw21I GWGCWC 1 cut(s) 216
AlwI GGATC 5 cut(s) 281, 325, 1093, 1268, 1281
AlwNI CAGNNNCTG 1 cut(s) 1030
Aor51HI AGCGCT 1 cut(s) 13
AoxI GGCC 2 cut(s) 778, 888
ApeKI GCWGC 4 cut(s) 732, 792, 967, 1027
ApoI RAATTY 2 cut(s) 263, 1033
ArsI GACNNNNNNTTYG 4 cut(s) 794, 826, 1199, 1231
Asp700I GAANNNNTTC 1 cut(s) 13
AspA2I CCTAGG 1 cut(s) 727
AspLEI GCGC 2 cut(s) 14, 385
AspS9I GGNCC 5 cut(s) 569, 670, 779, 926, 1079
AsuHPI GGTGA 4 cut(s) 271, 292, 628, 1024
AsuII TTCGAA 1 cut(s) 164
AsuNHI GCTAGC 2 cut(s) 385, 905
AvaII GGWCC 4 cut(s) 569, 670, 926, 1079
AvrII CCTAGG 1 cut(s) 727
BamHI GGATCC 1 cut(s) 1273
BanI GGYRCC 2 cut(s) 497, 1003
BbsI GAAGAC 2 cut(s) 804, 1136
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 4 cut(s) 744, 804, 979, 1014
BccI CCATC 3 cut(s) 281, 401, 428
BceAI ACGGC 1 cut(s) 616
BcgI CGANNNNNNTGC 2 cut(s) 1029, 1063
BciT130I CCWGG 1 cut(s) 1140
BciVI GTATCC 1 cut(s) 1200
BclI TGATCA 2 cut(s) 445, 1021
BfaI CTAG 6 cut(s) 96, 386, 728, 872, 906, 953
BfmI CTRYAG 1 cut(s) 1234
BfoI RGCGCY 1 cut(s) 15
BfuI GTATCC 1 cut(s) 1200
BisI GCNGC 4 cut(s) 733, 793, 968, 1028
BlnI CCTAGG 1 cut(s) 727
BlsI GCNGC 4 cut(s) 734, 794, 969, 1029
Bme1390I CCNGG 1 cut(s) 1140
Bme18I GGWCC 4 cut(s) 569, 670, 926, 1079
BmgT120I GGNCC 5 cut(s) 569, 670, 779, 926, 1079
BmiI GGNNCC 3 cut(s) 499, 1005, 1275
BmrFI CCNGG 1 cut(s) 1140
BmrI ACTGGG 1 cut(s) 245
BmsI GCATC 2 cut(s) 667, 892
BmtI GCTAGC 2 cut(s) 389, 909
BmuI ACTGGG 1 cut(s) 245
BpiI GAAGAC 2 cut(s) 804, 1136
BpmI CTGGAG 1 cut(s) 140
Bpu14I TTCGAA 1 cut(s) 164
BsaJI CCNNGG 1 cut(s) 727
BsaWI WCCGGW 1 cut(s) 566
BsaXI ACNNNNNCTCC 2 cut(s) 548, 578
Bsc4I CCNNNNNNNGG 5 cut(s) 309, 435, 757, 1159, 1211
Bse118I RCCGGY 1 cut(s) 638
Bse1I ACTGG 5 cut(s) 144, 157, 251, 844, 928
Bse3DI GCAATG 2 cut(s) 66, 795
BseBI CCWGG 1 cut(s) 1140
BseDI CCNNGG 1 cut(s) 727
BseLI CCNNNNNNNGG 5 cut(s) 309, 435, 757, 1159, 1211
BseMI GCAATG 2 cut(s) 66, 795
BseMII CTCAG 3 cut(s) 297, 668, 680
BseNI ACTGG 5 cut(s) 144, 157, 251, 844, 928
BseRI GAGGAG 1 cut(s) 740
BseXI GCAGC 4 cut(s) 744, 804, 979, 1014
BsgI GTGCAG 1 cut(s) 1194
Bsh1236I CGCG 2 cut(s) 383, 1187
BshFI GGCC 2 cut(s) 780, 890
BshNI GGYRCC 2 cut(s) 497, 1003
BsiHKAI GWGCWC 1 cut(s) 216
BsiSI CCGG 4 cut(s) 495, 567, 639, 1007
BslI CCNNNNNNNGG 5 cut(s) 309, 435, 757, 1159, 1211
BsmI GAATGC 1 cut(s) 1134
BsnI GGCC 2 cut(s) 780, 890
Bsp119I TTCGAA 1 cut(s) 164
Bsp1286I GDGCHC 1 cut(s) 216
Bsp143I GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
BspACI CCGC 4 cut(s) 176, 375, 582, 650
BspANI GGCC 2 cut(s) 780, 890
BspCNI CTCAG 3 cut(s) 296, 667, 679
BspFNI CGCG 2 cut(s) 383, 1187
BspLI GGNNCC 3 cut(s) 499, 1005, 1275
BspMAI CTGCAG 1 cut(s) 1238
BspOI GCTAGC 2 cut(s) 389, 909
BspPI GGATC 5 cut(s) 281, 325, 1093, 1268, 1281
BspT104I TTCGAA 1 cut(s) 164
BspT107I GGYRCC 2 cut(s) 497, 1003
BsrDI GCAATG 2 cut(s) 66, 795
BsrFI RCCGGY 1 cut(s) 638
BsrI ACTGG 5 cut(s) 144, 157, 251, 844, 928
BssAI RCCGGY 1 cut(s) 638
BssECI CCNNGG 1 cut(s) 727
BssMI GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
BssNAI GTATAC 1 cut(s) 247
BssT1I CCWWGG 1 cut(s) 727
Bst1107I GTATAC 1 cut(s) 247
Bst2UI CCWGG 1 cut(s) 1140
Bst4CI ACNGT 2 cut(s) 350, 936
Bst6I CTCTTC 1 cut(s) 689
BstAPI GCANNNNNTGC 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 164
BstC8I GCNNGC 2 cut(s) 387, 907
BstDEI CTNAG 4 cut(s) 283, 654, 666, 971
BstFNI CGCG 2 cut(s) 383, 1187
BstH2I RGCGCY 1 cut(s) 15
BstHHI GCGC 2 cut(s) 14, 385
BstKTI GATC 8 cut(s) 289, 320, 448, 1017, 1024, 1101, 1160, 1276
BstMBI GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
BstMWI GCNNNNNNNGC 3 cut(s) 77, 600, 868
BstNI CCWGG 1 cut(s) 1140
BstNSI RCATGY 1 cut(s) 63
BstSCI CCNGG 1 cut(s) 1138
BstSFI CTRYAG 1 cut(s) 1234
BstUI CGCG 2 cut(s) 383, 1187
BstV1I GCAGC 4 cut(s) 744, 804, 979, 1014
BstV2I GAAGAC 2 cut(s) 804, 1136
BstX2I RGATCY 2 cut(s) 286, 1273
BstYI RGATCY 2 cut(s) 286, 1273
BstZ17I GTATAC 1 cut(s) 247
BsuI GTATCC 1 cut(s) 1200
BsuRI GGCC 2 cut(s) 780, 890
BtsIMutI CAGTG 2 cut(s) 164, 819
Cac8I GCNNGC 2 cut(s) 387, 907
CaiI CAGNNNCTG 1 cut(s) 1030
CfoI GCGC 2 cut(s) 14, 385
Cfr10I RCCGGY 1 cut(s) 638
Cfr13I GGNCC 5 cut(s) 569, 670, 779, 926, 1079
CviAII CATG 6 cut(s) 60, 473, 595, 706, 1073, 1195
DdeI CTNAG 4 cut(s) 283, 654, 666, 971
DpnI GATC 8 cut(s) 288, 319, 447, 1016, 1023, 1100, 1159, 1275
DpnII GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
DraI TTTAAA 1 cut(s) 882
Eam1104I CTCTTC 1 cut(s) 689
EarI CTCTTC 1 cut(s) 689
EciI GGCGGA 1 cut(s) 639
Eco130I CCWWGG 1 cut(s) 727
Eco47I GGWCC 4 cut(s) 569, 670, 926, 1079
Eco47III AGCGCT 1 cut(s) 13
Eco57I CTGAAG 1 cut(s) 843
EcoO109I RGGNCCY 1 cut(s) 670
EcoRII CCWGG 1 cut(s) 1138
EcoT14I CCWWGG 1 cut(s) 727
ErhI CCWWGG 1 cut(s) 727
FaeI CATG 6 cut(s) 63, 476, 598, 709, 1076, 1198
FalI AAGNNNNNCTT 3 cut(s) 30, 816, 848
FatI CATG 6 cut(s) 59, 472, 594, 705, 1072, 1194
FbaI TGATCA 2 cut(s) 445, 1021
FblI GTMKAC 2 cut(s) 151, 246
Fnu4HI GCNGC 4 cut(s) 733, 793, 968, 1028
Fsp4HI GCNGC 4 cut(s) 733, 793, 968, 1028
FspBI CTAG 6 cut(s) 96, 386, 728, 872, 906, 953
GlaI GCGC 2 cut(s) 13, 384
GluI GCNGC 4 cut(s) 733, 793, 968, 1028
GsuI CTGGAG 1 cut(s) 140
HaeII RGCGCY 1 cut(s) 15
HaeIII GGCC 2 cut(s) 780, 890
HapII CCGG 4 cut(s) 495, 567, 639, 1007
HhaI GCGC 2 cut(s) 14, 385
Hin1II CATG 6 cut(s) 63, 476, 598, 709, 1076, 1198
Hin6I GCGC 2 cut(s) 12, 383
HinP1I GCGC 2 cut(s) 12, 383
HincII GTYRAC 2 cut(s) 849, 921
HindII GTYRAC 2 cut(s) 849, 921
HindIII AAGCTT 1 cut(s) 24
HpaI GTTAAC 2 cut(s) 849, 921
HpaII CCGG 4 cut(s) 495, 567, 639, 1007
HphI GGTGA 4 cut(s) 271, 292, 628, 1024
Hpy166II GTNNAC 4 cut(s) 152, 247, 849, 921
Hpy188I TCNGA 4 cut(s) 286, 322, 657, 1206
Hpy188III TCNNGA 5 cut(s) 443, 668, 719, 953, 1102
Hpy8I GTNNAC 4 cut(s) 152, 247, 849, 921
HpyAV CCTTC 2 cut(s) 49, 725
HpyCH4III ACNGT 2 cut(s) 350, 936
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 600, 868
HpyF3I CTNAG 4 cut(s) 283, 654, 666, 971
Hsp92II CATG 6 cut(s) 63, 476, 598, 709, 1076, 1198
HspAI GCGC 2 cut(s) 12, 383
Ksp22I TGATCA 2 cut(s) 445, 1021
KspAI GTTAAC 2 cut(s) 849, 921
Kzo9I GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
LmnI GCTCC 3 cut(s) 456, 740, 964
Lsp1109I GCAGC 4 cut(s) 744, 804, 979, 1014
LweI GCATC 2 cut(s) 667, 892
MaeI CTAG 6 cut(s) 96, 386, 728, 872, 906, 953
MaeIII GTNAC 3 cut(s) 350, 930, 1120
MalI GATC 8 cut(s) 288, 319, 447, 1016, 1023, 1100, 1159, 1275
MboI GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
MflI RGATCY 2 cut(s) 286, 1273
MhlI GDGCHC 1 cut(s) 216
MluCI AATT 5 cut(s) 263, 513, 628, 1033, 1060
MmeI TCCRAC 2 cut(s) 436, 507
MroXI GAANNNNTTC 1 cut(s) 13
MseI TTAA 5 cut(s) 35, 605, 848, 881, 920
MspA1I CMGCKG 1 cut(s) 1027
MspI CCGG 4 cut(s) 495, 567, 639, 1007
MspR9I CCNGG 1 cut(s) 1140
Mva1269I GAATGC 1 cut(s) 1134
MvaI CCWGG 1 cut(s) 1140
MvnI CGCG 2 cut(s) 383, 1187
MwoI GCNNNNNNNGC 3 cut(s) 77, 600, 868
NdeII GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
NheI GCTAGC 2 cut(s) 385, 905
NlaIII CATG 6 cut(s) 63, 476, 598, 709, 1076, 1198
NlaIV GGNNCC 3 cut(s) 499, 1005, 1275
NmeAIII GCCGAG 1 cut(s) 570
NmuCI GTSAC 1 cut(s) 350
NspI RCATGY 1 cut(s) 63
NspV TTCGAA 1 cut(s) 164
PctI GAATGC 1 cut(s) 1134
PdmI GAANNNNTTC 1 cut(s) 13
PflMI CCANNNNNTGG 1 cut(s) 309
PkrI GCNGC 4 cut(s) 734, 794, 969, 1029
PpuMI RGGWCCY 1 cut(s) 670
Psp5II RGGWCCY 1 cut(s) 670
Psp6I CCWGG 1 cut(s) 1138
PspGI CCWGG 1 cut(s) 1138
PspN4I GGNNCC 3 cut(s) 499, 1005, 1275
PspPI GGNCC 5 cut(s) 569, 670, 779, 926, 1079
PspPPI RGGWCCY 1 cut(s) 670
PsrI GAACNNNNNNTAC 2 cut(s) 1181, 1213
PstI CTGCAG 1 cut(s) 1238
PstNI CAGNNNCTG 1 cut(s) 1030
PsuI RGATCY 2 cut(s) 286, 1273
PvuII CAGCTG 1 cut(s) 1027
SaqAI TTAA 5 cut(s) 35, 605, 848, 881, 920
SatI GCNGC 4 cut(s) 733, 793, 968, 1028
Sau3AI GATC 8 cut(s) 286, 317, 445, 1014, 1021, 1098, 1157, 1273
Sau96I GGNCC 5 cut(s) 569, 670, 779, 926, 1079
ScrFI CCNGG 1 cut(s) 1140
SduI GDGCHC 1 cut(s) 216
SfaNI GCATC 2 cut(s) 667, 892
SfcI CTRYAG 1 cut(s) 1234
SfuI TTCGAA 1 cut(s) 164
SinI GGWCC 4 cut(s) 569, 670, 926, 1079
Sse9I AATT 5 cut(s) 263, 513, 628, 1033, 1060
SsiI CCGC 4 cut(s) 176, 375, 582, 650
SspMI CTAG 6 cut(s) 96, 386, 728, 872, 906, 953
StyD4I CCNGG 1 cut(s) 1138
StyI CCWWGG 1 cut(s) 727
TaaI ACNGT 2 cut(s) 350, 936
TaqI TCGA 2 cut(s) 164, 396
TasI AATT 5 cut(s) 263, 513, 628, 1033, 1060
Tru1I TTAA 5 cut(s) 35, 605, 848, 881, 920
Tru9I TTAA 5 cut(s) 35, 605, 848, 881, 920
TscAI CASTG 2 cut(s) 164, 826
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 4 cut(s) 732, 792, 967, 1027
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 3 cut(s) 611, 694, 1253
TspGWI ACGGA 1 cut(s) 918
TspRI CASTG 2 cut(s) 164, 826
Van91I CCANNNNNTGG 1 cut(s) 309
VpaK11BI GGWCC 4 cut(s) 569, 670, 926, 1079
XapI RAATTY 2 cut(s) 263, 1033
XbaI TCTAGA 1 cut(s) 952
XceI RCATGY 1 cut(s) 63
XmaJI CCTAGG 1 cut(s) 727
XmiI GTMKAC 2 cut(s) 151, 246
XmnI GAANNNNTTC 1 cut(s) 13
XspI CTAG 6 cut(s) 96, 386, 728, 872, 906, 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.