MD06G1126500.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
26851351 .. 26852317
967 bp
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UTR
Exon/CDS
Intron
MD06G1126500.v1.1.491

Sequence Viewer

Length: 264 bp
ATGTTTAGTCCACTTAGTGCCATTGTAGTGGCAGTATTTTCGGCAATTGCTTTCGCAGATTTGATTGGAGCACTTCTCACTATTGTGGGACTTTACTGTGTGCTGTGGGGAAAGAGGAAAGACAGTATTGGTGCTGAACATGGAGAGATTGAAAAAATGACGCTAGGCGATATTAAAGAGCTGGAGATTTCCATGAATGATAATTCAGTAGTCAATCCTGTCACTAGAGAAGAAAGGTTGGATCATCAGCAACGGTTGGTGTAA

Protein Analysis

88

Amino Acids

9.58

Weight (kDa)

4.97

Isoelectric Point (pI)

30.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 249
AdeI CACNNNGTG 1 cut(s) 17
AgsI TTSAA 1 cut(s) 152
AleI CACNNNNGTG 1 cut(s) 83
AluBI AGCT 1 cut(s) 181
AluI AGCT 1 cut(s) 181
Alw21I GWGCWC 1 cut(s) 73
AlwI GGATC 1 cut(s) 249
Bbv12I GWGCWC 1 cut(s) 73
BcgI CGANNNNNNTGC 2 cut(s) 21, 55
BfaI CTAG 2 cut(s) 164, 225
BplI GAGNNNNNCTC 2 cut(s) 60, 92
BpmI CTGGAG 1 cut(s) 203
BsiHKAI GWGCWC 1 cut(s) 73
BslFI GGGAC 1 cut(s) 102
BsmFI GGGAC 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 73
Bsp143I GATC 1 cut(s) 241
BspPI GGATC 1 cut(s) 249
BssMI GATC 1 cut(s) 241
Bst4CI ACNGT 3 cut(s) 98, 125, 255
BstDEI CTNAG 1 cut(s) 14
BstKTI GATC 1 cut(s) 244
BstMBI GATC 1 cut(s) 241
BstXI CCANNNNNNTGG 1 cut(s) 28
CseI GACGC 1 cut(s) 169
CviAII CATG 2 cut(s) 140, 193
CviJI RGCY 1 cut(s) 181
CviKI_1 RGCY 1 cut(s) 181
DdeI CTNAG 1 cut(s) 14
DpnI GATC 1 cut(s) 243
DpnII GATC 1 cut(s) 241
DraIII CACNNNGTG 1 cut(s) 17
FaeI CATG 2 cut(s) 143, 196
FaiI YATR 2 cut(s) 141, 194
FaqI GGGAC 1 cut(s) 102
FatI CATG 2 cut(s) 139, 192
FspBI CTAG 2 cut(s) 164, 225
GsuI CTGGAG 1 cut(s) 203
HgaI GACGC 1 cut(s) 169
Hin1II CATG 2 cut(s) 143, 196
Hpy166II GTNNAC 1 cut(s) 11
Hpy8I GTNNAC 1 cut(s) 11
HpyCH4III ACNGT 3 cut(s) 98, 125, 255
HpyF3I CTNAG 1 cut(s) 14
Hsp92II CATG 2 cut(s) 143, 196
Kzo9I GATC 1 cut(s) 241
LmnI GCTCC 1 cut(s) 68
LpnPI CCDG 2 cut(s) 167, 231
MaeI CTAG 2 cut(s) 164, 225
MaeIII GTNAC 1 cut(s) 220
MalI GATC 1 cut(s) 243
MboI GATC 1 cut(s) 241
MboII GAAGA 1 cut(s) 242
MfeI CAATTG 1 cut(s) 45
MhlI GDGCHC 1 cut(s) 73
MluCI AATT 2 cut(s) 45, 202
MmeI TCCRAC 1 cut(s) 219
MnlI CCTC 1 cut(s) 108
MseI TTAA 1 cut(s) 174
MslI CAYNNNNRTG 2 cut(s) 26, 83
MunI CAATTG 1 cut(s) 45
NdeII GATC 1 cut(s) 241
NlaIII CATG 2 cut(s) 143, 196
NmuCI GTSAC 1 cut(s) 220
OliI CACNNNNGTG 1 cut(s) 83
RseI CAYNNNNRTG 2 cut(s) 26, 83
SaqAI TTAA 1 cut(s) 174
Sau3AI GATC 1 cut(s) 241
SduI GDGCHC 1 cut(s) 73
SetI ASST 2 cut(s) 183, 239
SgeI CNNG 6 cut(s) 152, 176, 194, 205, 230, 237
SmiMI CAYNNNNRTG 2 cut(s) 26, 83
Sse9I AATT 2 cut(s) 45, 202
SspMI CTAG 2 cut(s) 164, 225
TaaI ACNGT 3 cut(s) 98, 125, 255
TasI AATT 2 cut(s) 45, 202
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TseFI GTSAC 1 cut(s) 220
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 1 cut(s) 209
XspI CTAG 2 cut(s) 164, 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.