Prupe.6G309000_v2.0.a1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27781683 .. 27783100
1418 bp
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UTR
Exon/CDS
Intron
Prupe.6G309000.2

Sequence Viewer

Length: 522 bp
GGATACCTATTTAAAGGTTCTGTAAAGAGGCCACTGATAAATATATCTGTTGGTGAGATGAGGCATGTTAAGGAAAACTGGATCAAGGGGGCTCTTCTTATTCTGACGAGTCACATTGCATGGAGTGCATGGCTAATCCTCCAGGCTGTGGTCTCCAAAGTCTACACTGCTCGATTATCGCTAACCAAGATGATATGCTTTTTCGCATCGTTGCAATCTTCTTTTCTTGCTCTGTTTTTCACAAGAAATCCAATTTCATGGAGACTGGAGTGGAACCTGCAACTTTCAACCATCGCCTACTGTGGAGTTGTAATCTCAGCATTAGCCTACTACCTGCAAACATGGTGCATCAGTTACAAGGGACCAATCTTTGCAGCTATGTTTAGTCCACTTCAAGTCATTACAGTGGCATTGTTCTCAGCAATTTCTTTCGCAGAGCGACTTCACTTTGGCAGCTTGATCAGAGCATTTCTCGTTATCGTGGGCCTTTACTGTGTGCTGTGGGGAAAGAAGGAAAGATAA

Protein Analysis

174

Amino Acids

19.64

Weight (kDa)

9.93

Isoelectric Point (pI)

30.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 285, 342
AccB7I CCANNNNNTGG 1 cut(s) 148
AccI GTMKAC 1 cut(s) 162
AclWI GGATC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 148
AgsI TTSAA 2 cut(s) 288, 395
AjnI CCWGG 1 cut(s) 141
AluBI AGCT 2 cut(s) 377, 456
AluI AGCT 2 cut(s) 377, 456
Alw26I GTCTC 2 cut(s) 157, 256
AlwI GGATC 1 cut(s) 89
AoxI GGCC 2 cut(s) 29, 484
ApeKI GCWGC 2 cut(s) 374, 453
AspS9I GGNCC 2 cut(s) 362, 484
AsuHPI GGTGA 1 cut(s) 65
AvaII GGWCC 1 cut(s) 362
BanII GRGCYC 1 cut(s) 94
BbvI GCAGC 2 cut(s) 386, 465
BccI CCATC 1 cut(s) 299
BciT130I CCWGG 1 cut(s) 143
BclI TGATCA 1 cut(s) 459
BcoDI GTCTC 2 cut(s) 157, 256
BfuAI ACCTGC 2 cut(s) 285, 342
BisI GCNGC 2 cut(s) 375, 454
BlsI GCNGC 2 cut(s) 376, 455
Bme1390I CCNGG 1 cut(s) 143
Bme18I GGWCC 1 cut(s) 362
BmgT120I GGNCC 2 cut(s) 362, 484
BmiI GGNNCC 2 cut(s) 275, 363
BmrFI CCNGG 1 cut(s) 143
BmsI GCATC 2 cut(s) 215, 357
BplI GAGNNNNNCTC 2 cut(s) 456, 488
BpmI CTGGAG 2 cut(s) 125, 287
BsaI GGTCTC 1 cut(s) 157
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse1I ACTGG 2 cut(s) 83, 270
Bse3DI GCAATG 1 cut(s) 114
BseBI CCWGG 1 cut(s) 143
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 2 cut(s) 330, 432
BseNI ACTGG 2 cut(s) 83, 270
BseXI GCAGC 2 cut(s) 386, 465
BshFI GGCC 2 cut(s) 31, 486
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 1 cut(s) 148
BsmAI GTCTC 2 cut(s) 157, 256
BsmFI GGGAC 1 cut(s) 375
BsnI GGCC 2 cut(s) 31, 486
Bso31I GGTCTC 1 cut(s) 157
Bsp1286I GDGCHC 1 cut(s) 94
Bsp143I GATC 2 cut(s) 81, 459
BspANI GGCC 2 cut(s) 31, 486
BspCNI CTCAG 2 cut(s) 329, 431
BspLI GGNNCC 2 cut(s) 275, 363
BspMI ACCTGC 2 cut(s) 285, 342
BspPI GGATC 1 cut(s) 89
BspQI GCTCTTC 1 cut(s) 99
BspTNI GGTCTC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 114
BsrI ACTGG 2 cut(s) 83, 270
BssMI GATC 2 cut(s) 81, 459
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 3 cut(s) 302, 406, 494
Bst6I CTCTTC 1 cut(s) 99
BstAPI GCANNNNNTGC 1 cut(s) 125
BstDEI CTNAG 2 cut(s) 316, 418
BstKTI GATC 2 cut(s) 84, 462
BstMAI GTCTC 2 cut(s) 157, 256
BstMBI GATC 2 cut(s) 81, 459
BstMWI GCNNNNNNNGC 1 cut(s) 125
BstNI CCWGG 1 cut(s) 143
BstNSI RCATGY 1 cut(s) 68
BstSCI CCNGG 1 cut(s) 141
BstV1I GCAGC 2 cut(s) 386, 465
BstXI CCANNNNNNTGG 1 cut(s) 258
BsuRI GGCC 2 cut(s) 31, 486
BtgZI GCGATG 1 cut(s) 277
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 3 cut(s) 32, 165, 411
BveI ACCTGC 2 cut(s) 285, 342
Cfr13I GGNCC 2 cut(s) 362, 484
CviAII CATG 5 cut(s) 65, 120, 129, 258, 342
CviJI RGCY 8 cut(s) 31, 92, 133, 146, 326, 377, 456, 486
CviKI_1 RGCY 8 cut(s) 31, 92, 133, 146, 326, 377, 456, 486
DdeI CTNAG 2 cut(s) 316, 418
DpnI GATC 2 cut(s) 83, 461
DpnII GATC 2 cut(s) 81, 459
DraI TTTAAA 1 cut(s) 13
Eam1104I CTCTTC 1 cut(s) 99
EarI CTCTTC 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 94
Eco31I GGTCTC 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 362
EcoRII CCWGG 1 cut(s) 141
EcoT38I GRGCYC 1 cut(s) 94
FaeI CATG 5 cut(s) 68, 123, 132, 261, 345
FaiI YATR 8 cut(s) 44, 66, 121, 130, 196, 259, 343, 380
FaqI GGGAC 1 cut(s) 375
FatI CATG 5 cut(s) 64, 119, 128, 257, 341
FbaI TGATCA 1 cut(s) 459
FblI GTMKAC 1 cut(s) 162
Fnu4HI GCNGC 2 cut(s) 375, 454
FriOI GRGCYC 1 cut(s) 94
Fsp4HI GCNGC 2 cut(s) 375, 454
GluI GCNGC 2 cut(s) 375, 454
GsuI CTGGAG 2 cut(s) 125, 287
HaeIII GGCC 2 cut(s) 31, 486
Hin1II CATG 5 cut(s) 68, 123, 132, 261, 345
HinfI GANTC 1 cut(s) 109
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 2 cut(s) 163, 389
Hpy188I TCNGA 2 cut(s) 105, 464
Hpy8I GTNNAC 2 cut(s) 163, 389
HpyAV CCTTC 1 cut(s) 505
HpyCH4III ACNGT 3 cut(s) 302, 406, 494
HpyCH4V TGCA 7 cut(s) 119, 128, 214, 280, 337, 348, 374
HpyF10VI GCNNNNNNNGC 1 cut(s) 125
HpyF3I CTNAG 2 cut(s) 316, 418
Hsp92II CATG 5 cut(s) 68, 123, 132, 261, 345
Ksp22I TGATCA 1 cut(s) 459
Kzo9I GATC 2 cut(s) 81, 459
LguI GCTCTTC 1 cut(s) 99
LpnPI CCDG 6 cut(s) 64, 128, 155, 251, 290, 347
Lsp1109I GCAGC 2 cut(s) 386, 465
LweI GCATC 2 cut(s) 215, 357
MaeIII GTNAC 2 cut(s) 110, 353
MalI GATC 2 cut(s) 83, 461
MboI GATC 2 cut(s) 81, 459
MboII GAAGA 2 cut(s) 86, 210
MhlI GDGCHC 1 cut(s) 94
MluCI AATT 2 cut(s) 252, 423
MlyI GAGTC 1 cut(s) 118
MnlI CCTC 3 cut(s) 21, 54, 149
MseI TTAA 2 cut(s) 12, 69
MslI CAYNNNNRTG 1 cut(s) 404
MspR9I CCNGG 1 cut(s) 143
MvaI CCWGG 1 cut(s) 143
MwoI GCNNNNNNNGC 1 cut(s) 125
NdeII GATC 2 cut(s) 81, 459
NlaIII CATG 5 cut(s) 68, 123, 132, 261, 345
NlaIV GGNNCC 2 cut(s) 275, 363
NmuCI GTSAC 1 cut(s) 110
NspI RCATGY 1 cut(s) 68
PciSI GCTCTTC 1 cut(s) 99
PflMI CCANNNNNTGG 1 cut(s) 148
PkrI GCNGC 2 cut(s) 376, 455
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 141
PspGI CCWGG 1 cut(s) 141
PspN4I GGNNCC 2 cut(s) 275, 363
PspPI GGNCC 2 cut(s) 362, 484
RseI CAYNNNNRTG 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 99
SaqAI TTAA 2 cut(s) 12, 69
SatI GCNGC 2 cut(s) 375, 454
Sau3AI GATC 2 cut(s) 81, 459
Sau96I GGNCC 2 cut(s) 362, 484
SchI GAGTC 1 cut(s) 118
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 1 cut(s) 94
SetI ASST 6 cut(s) 9, 19, 279, 336, 379, 458
SfaNI GCATC 2 cut(s) 215, 357
SinI GGWCC 1 cut(s) 362
SmiMI CAYNNNNRTG 1 cut(s) 404
Sse9I AATT 2 cut(s) 252, 423
StyD4I CCNGG 1 cut(s) 141
TaaI ACNGT 3 cut(s) 302, 406, 494
TaqI TCGA 1 cut(s) 172
TasI AATT 2 cut(s) 252, 423
Tru1I TTAA 2 cut(s) 12, 69
Tru9I TTAA 2 cut(s) 12, 69
TscAI CASTG 3 cut(s) 39, 172, 411
TseFI GTSAC 1 cut(s) 110
TseI GCWGC 2 cut(s) 374, 453
Tsp45I GTSAC 1 cut(s) 110
TspDTI ATGAA 1 cut(s) 246
TspRI CASTG 3 cut(s) 39, 172, 411
Van91I CCANNNNNTGG 1 cut(s) 148
VpaK11BI GGWCC 1 cut(s) 362
XceI RCATGY 1 cut(s) 68
XmiI GTMKAC 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.