MD07G1170600.v1.1

DVL family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0016494
Physical Location & Seq
Reverse (-)
24556085 .. 24556476
392 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1170600.v1.1.491

Sequence Viewer

Length: 186 bp
ATGAAGCAAGGGCAAGGCAGCAGCAGCAGAAACAACTTCTGTTGTAGGCGTGTGCGAGAGCCGTGTCGATCATTTGGGCGGAGATGCAGTATGCTGGTGAAGGAGCAGAGGGCAAGGTTCTATATCCTCAGGCGATGTGTCACAATGCTCATATGCTGGCATGAGCGTGTGATCATTGGACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DVL

Protein Analysis

62

Amino Acids

7.32

Weight (kDa)

11.08

Isoelectric Point (pI)

79.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DVL PF08137 34 - 52 1.6e-12 DVL family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 79
ApeKI GCWGC 3 cut(s) 18, 21, 24
AsuHPI GGTGA 1 cut(s) 109
AxyI CCTNAGG 1 cut(s) 128
BbvI GCAGC 3 cut(s) 30, 33, 36
BceAI ACGGC 1 cut(s) 46
BclI TGATCA 1 cut(s) 171
BisI GCNGC 3 cut(s) 19, 22, 25
BlsI GCNGC 3 cut(s) 20, 23, 26
BmsI GCATC 1 cut(s) 74
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bse21I CCTNAGG 1 cut(s) 128
BseMII CTCAG 1 cut(s) 142
BseXI GCAGC 3 cut(s) 30, 33, 36
Bsp143I GATC 2 cut(s) 68, 171
BspACI CCGC 1 cut(s) 79
BspCNI CTCAG 1 cut(s) 141
BssMI GATC 2 cut(s) 68, 171
Bst4CI ACNGT 1 cut(s) 183
BstC8I GCNNGC 1 cut(s) 158
BstDEI CTNAG 1 cut(s) 128
BstKTI GATC 2 cut(s) 71, 174
BstMBI GATC 2 cut(s) 68, 171
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstV1I GCAGC 3 cut(s) 30, 33, 36
Bsu36I CCTNAGG 1 cut(s) 128
BtgZI GCGATG 1 cut(s) 148
Cac8I GCNNGC 1 cut(s) 158
CviAII CATG 1 cut(s) 161
CviJI RGCY 1 cut(s) 61
CviKI_1 RGCY 1 cut(s) 61
DdeI CTNAG 1 cut(s) 128
DpnI GATC 2 cut(s) 70, 173
DpnII GATC 2 cut(s) 68, 171
EciI GGCGGA 1 cut(s) 94
Eco81I CCTNAGG 1 cut(s) 128
FaeI CATG 1 cut(s) 164
FaiI YATR 5 cut(s) 92, 123, 152, 154, 162
FatI CATG 1 cut(s) 160
FauNDI CATATG 1 cut(s) 152
FbaI TGATCA 1 cut(s) 171
Fnu4HI GCNGC 3 cut(s) 19, 22, 25
Fsp4HI GCNGC 3 cut(s) 19, 22, 25
GluI GCNGC 3 cut(s) 19, 22, 25
Hin1II CATG 1 cut(s) 164
HphI GGTGA 1 cut(s) 109
HpyAV CCTTC 1 cut(s) 94
HpyCH4III ACNGT 1 cut(s) 183
HpyCH4V TGCA 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 128
Hsp92II CATG 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 171
Kzo9I GATC 2 cut(s) 68, 171
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 3 cut(s) 80, 115, 142
Lsp1109I GCAGC 3 cut(s) 30, 33, 36
LweI GCATC 1 cut(s) 74
MaeIII GTNAC 1 cut(s) 139
MalI GATC 2 cut(s) 70, 173
MboI GATC 2 cut(s) 68, 171
MnlI CCTC 2 cut(s) 102, 137
MslI CAYNNNNRTG 1 cut(s) 165
MwoI GCNNNNNNNGC 1 cut(s) 24
NdeI CATATG 1 cut(s) 152
NdeII GATC 2 cut(s) 68, 171
NlaIII CATG 1 cut(s) 164
NmuCI GTSAC 1 cut(s) 139
PkrI GCNGC 3 cut(s) 20, 23, 26
RseI CAYNNNNRTG 1 cut(s) 165
SatI GCNGC 3 cut(s) 19, 22, 25
Sau3AI GATC 2 cut(s) 68, 171
SetI ASST 1 cut(s) 119
SfaNI GCATC 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 165
SsiI CCGC 1 cut(s) 79
TaaI ACNGT 1 cut(s) 183
TaqI TCGA 1 cut(s) 67
TseFI GTSAC 1 cut(s) 139
TseI GCWGC 3 cut(s) 18, 21, 24
Tsp45I GTSAC 1 cut(s) 139
TspDTI ATGAA 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.