MD07G1177400.v1.1

MIZ/SP-RING zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000955
Physical Location & Seq
Reverse (-)
25685014 .. 25693991
8978 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1177400.v1.1.491

Sequence Viewer

Length: 2295 bp
ATGGATGTGGTGGTCGAGTGCAAGAGAAAATTGGCATCCTTTCGAGTCACAGACCTTAAGGATGTTCTGACTCAGCTGGGTAGATCTAAGCAAGGGCGGAAACAGGATCTGATTGATAGAATCCTAGCAGAAGTTTCAGATCAACAAAGGTTCTTACCACCATCCAATGCACTCCATCCATCAAAGAAAAAAATCATTGAGAAGAAAGGAATAGCAGAACTGATTGATGAAGCTTACAGAAAATTGCCGAATGCAGCATCAGCTGATTCTGCTTCAAAGGAACAGAGTGGTTCAGACACCTGCAGTGTAAAACCTAAAAAGGAAGTTAAAACTTTTAATGATCCAGATGTGAAGATTCGCTGCCCCTGTGGAAGTGCATTGCCTACTGGGTCGACGATACAGTGTGTGGACCCAAGTTGTCAAGTGCAGCAACATATTGGTTGTGTTATTATCCCAGAGAAAACAGGGGATTGCAATGTACCAGTTCGGCCTCTTTTCTACTGTGAATTGTGTCGTCTCAAACGAGTAGATCCTTTTTGGGTGACTCTGGTAGATCTACTATCTCCGGTGAAACTAGTTACTTCAAATATTCCAATAGATGGTACAAATCCTACTCAGAGAGTAGAGAAGACATTTCTACTTTCTAGAGCCAATAGAGATATACTAAAGGATAATGAGTATGATGTTCAGGCATGGTGTATACTTCTTAATGATAGTGTTTCATTTAGAATGCAATGGCCACAGTATGCAGATTTACAGGTCAATGGTATGAATGTTAGGACAGTTAATAGACCTGCACATCAATTGATAGGTGCCAATGGTCGTGATGATGGAGCATTAATCAAATTATGCATTTGGGAGGGAATCAATAAGATTTCACTATCAGCATGTGATAATCGTGCTTTCTGTATCGGTGTCAGACTTGTACAGCGACGAACAGTTCAGCAGGTTCGCAACTTGATTCCTAAAGAAGAAGATGGTGAGCTTTTTGAAGATGCACTAGCACGAGTTCGTCGTTGCATTGGTGGTGGGCCTGCTGTTGCAGCTGAAGATAGTGATAGTGACCTGGAAGTAATTTCAGACTCAATATCAGTAAATCTCCGCTGCCCTATGAGTGGTAGTCGAATGAAGGTAGCTGGCAGATTCAAACCTTGTGCCCACATGGGTTGCTTTGATCTTGAAACTTTTTGGCAATGTCCTGTATGCCTGAAGAACTACTCTGTAGAGGATGTCATCATTGACCGTTATTTCAATCGCATTACAGCTATGATGCGAAATTGTGGAGAAGACATAACAGAGATCAACGTAAAGCCAGATGGTTCTTGGAGTGCAAAGACCAAAGGCGAGTTTGGTGATCTTGCGCAGTGGCATTTGCCTGATGGATCTCCATGCGGTGATAGTCATTTAGAACCCTCGAGGAAGTTGAAGCTGGAATCTGGTTTAAACGAAGATCATAGAGTTATGTATAATGGGGTTACTGAAGTTCGTGGGCATCAGCATGGCCCATTAGAGAAAGTATATGAAGGCTGCAGTCACAATGTAATAACAATGAGCAGCAGTGACTGCAGCGGGCACATGGATTTCTCTGTAAATGAAGACAATGAAATCAATTCTGTACCATATAATTCTGATCCAACGTTTTCAAATATGAATGGTGATTCTGCTGAAGCTAGGAATACTGACATCATCATTCTTAGTGACTCCGAAGAAGAAGATGCCAACTTTGTTTCTTCTGGAACCCCGTACAATCCATTGCGAGTAAGTGGAACAGATTCTGTGTTCCAATTCTTTGGTAATGTCTCTGGTTCTTTCATTGATAACACATTGGTTCCAGAGGATCTAAATTCGAGCACCCAAGTTATGAACTCTTCTATGTTCCATGCTGATGCTGGATTGGACTTGATTGAAAACACCTTGCCCTTTGCTAGTGAGGACCCCTCACTGCAAAATTTTCTTCCAACTCAGCCCTCGGCTTTGTTGGAACAGTCTGATTCTGGACATCCTCCTCCAGAATCGAATGGCATTAGTGGGGACGACTGGATCTCTCTTCGACTTGGCAGGGTCGATGAAAGTGTTCCCAATTCCTGCCCTGGACCTGCATCCACAAATGAAGTACAACTGAGTAACGAATGTGAATCAGATGAAGCTACTCCTTTAATTAAGGATAGAACTGATGAGGTTAGGTCTAACAAAGTAAAGTCGCGGAGATTTTCAGACGGGCCTTTCTCCTTTCCTCGTCAGCCAAGGACTTTGAGACAACGAGTTTATCTACCAGTAGAATCCAACTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
SAP zf-MIZ

Protein Analysis

765

Amino Acids

84.69

Weight (kDa)

5.12

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 11 - 42 1.1e-07 SAP domain
zf-MIZ PF02891 365 - 404 3e-10 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000955)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970
malus_domestica MD01G1111200.v1.1 MD07G1177400.v1.1
prunus_persica Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1
pyrus_communis pycom01g13860 pycom07g17140
rosa_chinensis RchiOBHm_Chr1g0363931
rosa_laevigata RLG00000027534
rosa_multiflora Rmu_sc0001607.1_g000006
rosa_roxburghii Rroxscaffold_4G00292830
rosa_rugosa Rorug01G0311200 Rorug01G0311300
rosa_samantha Rh1AG319200 Rh1BG282200 Rh1CG298700 Rh1DG313600
rosa_wichuraiana Rw1G028290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 308
AbsI CCTCGAGG 1 cut(s) 1414
Acc16I TGCGCA 1 cut(s) 1362
Acc36I ACCTGC 4 cut(s) 308, 802, 937, 2104
AccB1I GGYRCC 1 cut(s) 812
AccB7I CCANNNNNTGG 1 cut(s) 599
AccI GTMKAC 2 cut(s) 392, 700
AccII CGCG 1 cut(s) 2203
AciI CCGC 5 cut(s) 97, 1102, 1392, 1569, 2203
AclI AACGTT 1 cut(s) 1637
AclWI GGATC 7 cut(s) 114, 335, 524, 1390, 1625, 1845, 2048
AcoI YGGCCR 1 cut(s) 737
AcsI RAATTY 2 cut(s) 1843, 1948
AcuI CTGAAG 4 cut(s) 1068, 1229, 1500, 1686
AfaI GTAC 6 cut(s) 480, 604, 927, 1617, 1745, 2115
AfiI CCNNNNNNNGG 2 cut(s) 599, 1115
AflII CTTAAG 1 cut(s) 56
AgsI TTSAA 9 cut(s) 276, 585, 992, 1147, 1181, 1252, 1426, 1644, 1907
AhlI ACTAGT 1 cut(s) 574
AjnI CCWGG 2 cut(s) 1065, 2089
Alw21I GWGCWC 1 cut(s) 1853
Alw26I GTCTC 3 cut(s) 521, 1804, 2248
AlwI GGATC 7 cut(s) 114, 335, 524, 1390, 1625, 1845, 2048
AlwNI CAGNNNCTG 3 cut(s) 109, 1563, 1775
Ama87I CYCGRG 1 cut(s) 1414
AoxI GGCC 5 cut(s) 488, 737, 1031, 1501, 2219
ApeKI GCWGC 8 cut(s) 254, 360, 427, 1043, 1104, 1527, 1554, 1566
ApoI RAATTY 2 cut(s) 1843, 1948
AseI ATTAAT 1 cut(s) 839
Asp700I GAANNNNTTC 2 cut(s) 1771, 2073
AspLEI GCGC 1 cut(s) 1363
AspS9I GGNCC 6 cut(s) 409, 1031, 1502, 1933, 2093, 2219
AsuHPI GGTGA 6 cut(s) 553, 580, 992, 1364, 1406, 1667
AvaI CYCGRG 1 cut(s) 1414
AvaII GGWCC 3 cut(s) 409, 1933, 2093
BaeGI GKGCMC 2 cut(s) 1159, 1575
BalI TGGCCA 1 cut(s) 739
BanI GGYRCC 1 cut(s) 812
BauI CACGAG 1 cut(s) 1005
BbsI GAAGAC 3 cut(s) 635, 1293, 1602
Bbv12I GWGCWC 1 cut(s) 1853
BbvI GCAGC 8 cut(s) 266, 347, 439, 1055, 1091, 1514, 1566, 1578
BccI CCATC 8 cut(s) 169, 183, 187, 593, 824, 971, 1310, 1373
BciT130I CCWGG 2 cut(s) 1067, 2091
BcoDI GTCTC 3 cut(s) 521, 1804, 2248
BcuI ACTAGT 1 cut(s) 574
BfaI CTAG 6 cut(s) 125, 575, 645, 1001, 1671, 1926
BfmI CTRYAG 4 cut(s) 301, 1221, 1528, 1564
BfrI CTTAAG 1 cut(s) 56
BfuAI ACCTGC 4 cut(s) 308, 802, 937, 2104
BglII AGATCT 2 cut(s) 83, 553
BisI GCNGC 8 cut(s) 255, 361, 428, 1044, 1105, 1528, 1555, 1567
BlsI GCNGC 8 cut(s) 256, 362, 429, 1045, 1106, 1529, 1556, 1568
Bme1390I CCNGG 2 cut(s) 1067, 2091
Bme18I GGWCC 3 cut(s) 409, 1933, 2093
BmeT110I CYCGRG 1 cut(s) 1414
BmgT120I GGNCC 6 cut(s) 409, 1031, 1502, 1933, 2093, 2219
BmiI GGNNCC 5 cut(s) 411, 814, 1738, 1830, 1935
BmrFI CCNGG 2 cut(s) 1067, 2091
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 8 cut(s) 44, 266, 985, 1260, 1501, 1705, 1876, 2108
BmuI ACTGGG 1 cut(s) 396
BpiI GAAGAC 3 cut(s) 635, 1293, 1602
BplI GAGNNNNNCTC 2 cut(s) 1922, 1954
BpmI CTGGAG 1 cut(s) 1992
BsaJI CCNNGG 3 cut(s) 1968, 2089, 2243
BsaWI WCCGGW 1 cut(s) 565
Bsc4I CCNNNNNNNGG 2 cut(s) 599, 1115
Bse1I ACTGG 4 cut(s) 391, 482, 2042, 2273
Bse3DI GCAATG 5 cut(s) 377, 481, 740, 1199, 1751
BseBI CCWGG 2 cut(s) 1067, 2091
BseDI CCNNGG 3 cut(s) 1968, 2089, 2243
BseGI GGATG 8 cut(s) 10, 35, 67, 161, 175, 1234, 1999, 2099
BseLI CCNNNNNNNGG 2 cut(s) 599, 1115
BseMI GCAATG 5 cut(s) 377, 481, 740, 1199, 1751
BseMII CTCAG 4 cut(s) 86, 629, 1976, 2111
BseNI ACTGG 4 cut(s) 391, 482, 2042, 2273
BseRI GAGGAG 1 cut(s) 1995
BseSI GKGCMC 2 cut(s) 1159, 1575
BseXI GCAGC 8 cut(s) 266, 347, 439, 1055, 1091, 1514, 1566, 1578
BseYI CCCAGC 1 cut(s) 76
BsgI GTGCAG 2 cut(s) 446, 780
Bsh1236I CGCG 1 cut(s) 2203
BshFI GGCC 5 cut(s) 490, 739, 1033, 1503, 2221
BshNI GGYRCC 1 cut(s) 812
BsiHKAI GWGCWC 1 cut(s) 1853
BsiHKCI CYCGRG 1 cut(s) 1414
BsiSI CCGG 1 cut(s) 566
BslFI GGGAC 1 cut(s) 2045
BslI CCNNNNNNNGG 2 cut(s) 599, 1115
BsmAI GTCTC 3 cut(s) 521, 1804, 2248
BsmBI CGTCTC 1 cut(s) 521
BsmFI GGGAC 1 cut(s) 2045
BsmI GAATGC 2 cut(s) 256, 735
BsnI GGCC 5 cut(s) 490, 739, 1033, 1503, 2221
BsoBI CYCGRG 1 cut(s) 1414
Bsp1286I GDGCHC 3 cut(s) 1159, 1575, 1853
Bsp1407I TGTACA 1 cut(s) 925
BspACI CCGC 5 cut(s) 97, 1102, 1392, 1569, 2203
BspANI GGCC 5 cut(s) 490, 739, 1033, 1503, 2221
BspCNI CTCAG 4 cut(s) 85, 628, 1975, 2112
BspFNI CGCG 1 cut(s) 2203
BspLI GGNNCC 5 cut(s) 411, 814, 1738, 1830, 1935
BspMAI CTGCAG 3 cut(s) 305, 1532, 1568
BspMI ACCTGC 4 cut(s) 308, 802, 937, 2104
BspPI GGATC 7 cut(s) 114, 335, 524, 1390, 1625, 1845, 2048
BspT107I GGYRCC 1 cut(s) 812
BspTI CTTAAG 1 cut(s) 56
BsrDI GCAATG 5 cut(s) 377, 481, 740, 1199, 1751
BsrGI TGTACA 1 cut(s) 925
BsrI ACTGG 4 cut(s) 391, 482, 2042, 2273
BssECI CCNNGG 3 cut(s) 1968, 2089, 2243
BssNAI GTATAC 1 cut(s) 701
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 1 cut(s) 2243
Bst1107I GTATAC 1 cut(s) 701
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 1067, 2091
Bst4CI ACNGT 7 cut(s) 402, 503, 744, 784, 940, 1244, 1986
Bst6I CTCTTC 2 cut(s) 1873, 2052
BstAFI CTTAAG 1 cut(s) 56
BstAPI GCANNNNNTGC 1 cut(s) 1563
BstAUI TGTACA 1 cut(s) 925
BstC8I GCNNGC 3 cut(s) 1035, 1138, 1571
BstDEI CTNAG 6 cut(s) 72, 87, 615, 1694, 1962, 2120
BstF5I GGATG 8 cut(s) 10, 35, 67, 161, 175, 1234, 1999, 2099
BstFNI CGCG 1 cut(s) 2203
BstHHI GCGC 1 cut(s) 1363
BstMAI GTCTC 3 cut(s) 521, 1804, 2248
BstMWI GCNNNNNNNGC 4 cut(s) 260, 269, 1043, 1563
BstNI CCWGG 2 cut(s) 1067, 2091
BstNSI RCATGY 1 cut(s) 891
BstSCI CCNGG 2 cut(s) 1065, 2089
BstSFI CTRYAG 4 cut(s) 301, 1221, 1528, 1564
BstSLI GKGCMC 2 cut(s) 1159, 1575
BstUI CGCG 1 cut(s) 2203
BstV1I GCAGC 8 cut(s) 266, 347, 439, 1055, 1091, 1514, 1566, 1578
BstV2I GAAGAC 3 cut(s) 635, 1293, 1602
BstX2I RGATCY 7 cut(s) 83, 106, 529, 553, 1382, 1837, 2040
BstXI CCANNNNNNTGG 1 cut(s) 1790
BstYI RGATCY 7 cut(s) 83, 106, 529, 553, 1382, 1837, 2040
BstZ17I GTATAC 1 cut(s) 701
BsuRI GGCC 5 cut(s) 490, 739, 1033, 1503, 2221
BtsCI GGATG 8 cut(s) 10, 35, 67, 161, 175, 1234, 1999, 2099
BtsI GCAGTG 4 cut(s) 310, 1370, 1564, 1940
BtsIMutI CAGTG 5 cut(s) 310, 407, 1370, 1564, 1940
BveI ACCTGC 4 cut(s) 308, 802, 937, 2104
Cac8I GCNNGC 3 cut(s) 1035, 1138, 1571
CaiI CAGNNNCTG 3 cut(s) 109, 1563, 1775
CfoI GCGC 1 cut(s) 1363
Cfr13I GGNCC 6 cut(s) 409, 1031, 1502, 1933, 2093, 2219
Csp6I GTAC 6 cut(s) 479, 603, 926, 1616, 1744, 2114
CspCI CAANNNNNGTGG 2 cut(s) 1148, 1183
CviAII CATG 7 cut(s) 693, 888, 1162, 1389, 1499, 1576, 1880
CviQI GTAC 6 cut(s) 479, 603, 926, 1616, 1744, 2114
DdeI CTNAG 6 cut(s) 72, 87, 615, 1694, 1962, 2120
DraI TTTAAA 1 cut(s) 1443
EaeI YGGCCR 1 cut(s) 737
Eam1104I CTCTTC 2 cut(s) 1873, 2052
EarI CTCTTC 2 cut(s) 1873, 2052
EciI GGCGGA 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 2243
Eco47I GGWCC 3 cut(s) 409, 1933, 2093
Eco57I CTGAAG 4 cut(s) 1068, 1229, 1500, 1686
Eco88I CYCGRG 1 cut(s) 1414
EcoO109I RGGNCCY 1 cut(s) 1933
EcoRII CCWGG 2 cut(s) 1065, 2089
EcoT14I CCWWGG 1 cut(s) 2243
EcoT22I ATGCAT 1 cut(s) 854
ErhI CCWWGG 1 cut(s) 2243
Esp3I CGTCTC 1 cut(s) 521
FaeI CATG 7 cut(s) 696, 891, 1165, 1392, 1502, 1579, 1883
FaqI GGGAC 1 cut(s) 2045
FatI CATG 7 cut(s) 692, 887, 1161, 1388, 1498, 1575, 1879
FauI CCCGC 1 cut(s) 1562
FblI GTMKAC 2 cut(s) 392, 700
Fnu4HI GCNGC 8 cut(s) 255, 361, 428, 1044, 1105, 1528, 1555, 1567
FokI GGATG 8 cut(s) 17, 22, 74, 148, 162, 1241, 1986, 2086
Fsp4HI GCNGC 8 cut(s) 255, 361, 428, 1044, 1105, 1528, 1555, 1567
FspBI CTAG 6 cut(s) 125, 575, 645, 1001, 1671, 1926
FspI TGCGCA 1 cut(s) 1362
GlaI GCGC 1 cut(s) 1362
GluI GCNGC 8 cut(s) 255, 361, 428, 1044, 1105, 1528, 1555, 1567
GsaI CCCAGC 1 cut(s) 80
GsuI CTGGAG 1 cut(s) 1992
HaeIII GGCC 5 cut(s) 490, 739, 1033, 1503, 2221
HapII CCGG 1 cut(s) 566
HhaI GCGC 1 cut(s) 1363
Hin1II CATG 7 cut(s) 696, 891, 1165, 1392, 1502, 1579, 1883
Hin6I GCGC 1 cut(s) 1361
HinP1I GCGC 1 cut(s) 1361
HincII GTYRAC 1 cut(s) 393
HindII GTYRAC 1 cut(s) 393
HindIII AAGCTT 1 cut(s) 231
HpaII CCGG 1 cut(s) 566
HphI GGTGA 6 cut(s) 553, 580, 992, 1364, 1406, 1667
Hpy166II GTNNAC 3 cut(s) 393, 409, 701
Hpy188III TCNNGA 8 cut(s) 344, 645, 824, 1178, 1734, 1832, 1995, 2009
Hpy8I GTNNAC 3 cut(s) 393, 409, 701
Hpy99I CGWCG 3 cut(s) 397, 936, 1017
HpyAV CCTTC 2 cut(s) 1123, 1517
HpyCH4III ACNGT 7 cut(s) 402, 503, 744, 784, 940, 1244, 1986
HpyCH4IV ACGT 2 cut(s) 1305, 1637
HpyF10VI GCNNNNNNNGC 4 cut(s) 260, 269, 1043, 1563
HpyF3I CTNAG 6 cut(s) 72, 87, 615, 1694, 1962, 2120
HpySE526I ACGT 2 cut(s) 1305, 1637
Hsp92II CATG 7 cut(s) 696, 891, 1165, 1392, 1502, 1579, 1883
HspAI GCGC 1 cut(s) 1361
LmnI GCTCC 1 cut(s) 833
Lsp1109I GCAGC 8 cut(s) 266, 347, 439, 1055, 1091, 1514, 1566, 1578
LweI GCATC 8 cut(s) 44, 266, 985, 1260, 1501, 1705, 1876, 2108
MaeI CTAG 6 cut(s) 125, 575, 645, 1001, 1671, 1926
MaeII ACGT 2 cut(s) 1305, 1637
MaeIII GTNAC 9 cut(s) 46, 541, 577, 1061, 1474, 1532, 1559, 1697, 2123
MfeI CAATTG 1 cut(s) 803
MflI RGATCY 7 cut(s) 83, 106, 529, 553, 1382, 1837, 2040
MhlI GDGCHC 3 cut(s) 1159, 1575, 1853
MlsI TGGCCA 1 cut(s) 739
MluNI TGGCCA 1 cut(s) 739
MlyI GAGTC 5 cut(s) 54, 64, 538, 1076, 1694
MmeI TCCRAC 3 cut(s) 1658, 1959, 1982
Mox20I TGGCCA 1 cut(s) 739
Mph1103I ATGCAT 1 cut(s) 854
MroXI GAANNNNTTC 2 cut(s) 1771, 2073
MscI TGGCCA 1 cut(s) 739
MseI TTAA 9 cut(s) 57, 327, 336, 708, 786, 839, 1442, 2156, 2160
MslI CAYNNNNRTG 2 cut(s) 1497, 1884
Msp20I TGGCCA 1 cut(s) 739
MspA1I CMGCKG 5 cut(s) 76, 263, 1046, 1104, 1569
MspCI CTTAAG 1 cut(s) 56
MspI CCGG 1 cut(s) 566
MspR9I CCNGG 2 cut(s) 1067, 2091
MssI GTTTAAAC 1 cut(s) 1443
MunI CAATTG 1 cut(s) 803
Mva1269I GAATGC 2 cut(s) 256, 735
MvaI CCWGG 2 cut(s) 1067, 2091
MvnI CGCG 1 cut(s) 2203
MwoI GCNNNNNNNGC 4 cut(s) 260, 269, 1043, 1563
NlaIII CATG 7 cut(s) 696, 891, 1165, 1392, 1502, 1579, 1883
NlaIV GGNNCC 5 cut(s) 411, 814, 1738, 1830, 1935
NmeAIII GCCGAG 1 cut(s) 1949
NmuCI GTSAC 6 cut(s) 46, 541, 1061, 1532, 1559, 1697
NsbI TGCGCA 1 cut(s) 1362
NsiI ATGCAT 1 cut(s) 854
NspI RCATGY 1 cut(s) 891
PacI TTAATTAA 1 cut(s) 2160
PaeR7I CTCGAG 1 cut(s) 1414
PaqCI CACCTGC 1 cut(s) 308
PcsI WCGNNNNNNNCGW 2 cut(s) 520, 1012
PctI GAATGC 2 cut(s) 256, 735
PdmI GAANNNNTTC 2 cut(s) 1771, 2073
PflMI CCANNNNNTGG 1 cut(s) 599
PkrI GCNGC 8 cut(s) 256, 362, 429, 1045, 1106, 1529, 1556, 1568
PleI GAGTC 5 cut(s) 53, 64, 538, 1076, 1694
PmeI GTTTAAAC 1 cut(s) 1443
PpsI GAGTC 5 cut(s) 53, 64, 538, 1076, 1694
PpuMI RGGWCCY 1 cut(s) 1933
PshBI ATTAAT 1 cut(s) 839
Psp1406I AACGTT 1 cut(s) 1637
Psp5II RGGWCCY 1 cut(s) 1933
Psp6I CCWGG 2 cut(s) 1065, 2089
PspFI CCCAGC 1 cut(s) 76
PspGI CCWGG 2 cut(s) 1065, 2089
PspN4I GGNNCC 5 cut(s) 411, 814, 1738, 1830, 1935
PspPI GGNCC 6 cut(s) 409, 1031, 1502, 1933, 2093, 2219
PspPPI RGGWCCY 1 cut(s) 1933
PspXI VCTCGAGB 1 cut(s) 1414
PstI CTGCAG 3 cut(s) 305, 1532, 1568
PstNI CAGNNNCTG 3 cut(s) 109, 1563, 1775
PsuI RGATCY 7 cut(s) 83, 106, 529, 553, 1382, 1837, 2040
PvuII CAGCTG 3 cut(s) 76, 263, 1046
RsaI GTAC 6 cut(s) 480, 604, 927, 1617, 1745, 2115
RsaNI GTAC 6 cut(s) 479, 603, 926, 1616, 1744, 2114
RseI CAYNNNNRTG 2 cut(s) 1497, 1884
SalI GTCGAC 1 cut(s) 391
SaqAI TTAA 9 cut(s) 57, 327, 336, 708, 786, 839, 1442, 2156, 2160
SatI GCNGC 8 cut(s) 255, 361, 428, 1044, 1105, 1528, 1555, 1567
Sau96I GGNCC 6 cut(s) 409, 1031, 1502, 1933, 2093, 2219
SchI GAGTC 5 cut(s) 54, 64, 538, 1076, 1694
ScrFI CCNGG 2 cut(s) 1067, 2091
SduI GDGCHC 3 cut(s) 1159, 1575, 1853
SfaNI GCATC 8 cut(s) 44, 266, 985, 1260, 1501, 1705, 1876, 2108
SfcI CTRYAG 4 cut(s) 301, 1221, 1528, 1564
Sfr274I CTCGAG 1 cut(s) 1414
SinI GGWCC 3 cut(s) 409, 1933, 2093
SlaI CTCGAG 1 cut(s) 1414
SmiMI CAYNNNNRTG 2 cut(s) 1497, 1884
SmlI CTYRAG 2 cut(s) 56, 1414
SmoI CTYRAG 2 cut(s) 56, 1414
SpeI ACTAGT 1 cut(s) 574
SsiI CCGC 5 cut(s) 97, 1102, 1392, 1569, 2203
SspI AATATT 1 cut(s) 589
SspMI CTAG 6 cut(s) 125, 575, 645, 1001, 1671, 1926
StyD4I CCNGG 2 cut(s) 1065, 2089
StyI CCWWGG 1 cut(s) 2243
TaaI ACNGT 7 cut(s) 402, 503, 744, 784, 940, 1244, 1986
TaiI ACGT 2 cut(s) 1308, 1640
TaqI TCGA 9 cut(s) 15, 43, 392, 1123, 1415, 1847, 2015, 2050, 2064
TatI WGTACW 2 cut(s) 925, 2113
Tru1I TTAA 9 cut(s) 57, 327, 336, 708, 786, 839, 1442, 2156, 2160
Tru9I TTAA 9 cut(s) 57, 327, 336, 708, 786, 839, 1442, 2156, 2160
TscAI CASTG 5 cut(s) 310, 407, 1370, 1564, 1947
TseFI GTSAC 6 cut(s) 46, 541, 1061, 1532, 1559, 1697
TseI GCWGC 8 cut(s) 254, 360, 427, 1043, 1104, 1527, 1554, 1566
Tsp45I GTSAC 6 cut(s) 46, 541, 1061, 1532, 1559, 1697
TspRI CASTG 5 cut(s) 310, 407, 1370, 1564, 1947
Van91I CCANNNNNTGG 1 cut(s) 599
Vha464I CTTAAG 1 cut(s) 56
VpaK11BI GGWCC 3 cut(s) 409, 1933, 2093
VspI ATTAAT 1 cut(s) 839
XapI RAATTY 2 cut(s) 1843, 1948
XbaI TCTAGA 1 cut(s) 644
XceI RCATGY 1 cut(s) 891
XcmI CCANNNNNNNNNTGG 2 cut(s) 1320, 1886
XhoI CTCGAG 1 cut(s) 1414
XmiI GTMKAC 2 cut(s) 392, 700
XmnI GAANNNNTTC 2 cut(s) 1771, 2073
XspI CTAG 6 cut(s) 125, 575, 645, 1001, 1671, 1926
Zsp2I ATGCAT 1 cut(s) 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.