Rh1AG319200

MIZ/SP-RING zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000955
Physical Location & Seq
Reverse (-)
55342094 .. 55350388
8295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG319200.1

Sequence Viewer

Length: 2571 bp
ATGGGTTCAGATGCTAAGGAAATGGATTTGGTAACTCAATGCAAGACCAAGTTGGTGTCTTTTCGAATTAAGGAGCTCAAGGATGTTCTGACCCAGCTGGGTTTTTCAAAGCAAGGGAGGAAGCAGGATCTAATCGACAGAATCTTAGCATCAGTTTCGGACGAAGAAACATCCAATACACGCAGTTTGTCAAAGAAAAAACACATCGAGAAGAATGGAGTAGTGCAAGTAATTGATGAAGCTTACAGAAAGATGCAGAGTACACCGTCAACGGATTCTCCGACAAAGGAACAAAGTGGTTCAGATGGCTGCAGTGTGAAGCCCTCTAGAAAGGAAGTTAAAAATTTGAATGTGACAGACGTGAAGATTTCTTGCCCCTGTAAAAGTTCATTGTCAGCTGATTCAATGATACAGTGTGTAAATCCAATATGTCAAGTTCAGCAACATATTGGTTGCGTGATTATTCCTGAAAAAACAAAGGATTGCAGTCCACCAGTTCCGCCTCTTTTCTACTGTGAAATGTGTCGTCTCAAACGAGCAGATCCTTACTGGGTGACTGTGGTGGATCTAGTATCTGCAGTGAAGTTAACTGCTTCAAATATTTCAATTGATGGTGCAAATCCAACTCAGAATGTGGAGAAAAATTTTCAACTTTCCAGAGCCAATAGAGATCTACTTCATCATAATGAATATGATGTTCAGGCTTGGTGTATACTTCTCAATGATAGTGTTTCATTTAGGTTGCAATGGCCTCAGTTTGCAGAATTACAAGTTAATGGTACGATTGTTAGGGCAGTTAATAGACCTGGACATCAATTGTTAGGTGCTAATGGCCGTGATGATGGAGCATTAATCAAATTTTGCATTGGGGAGGGAATCAATAAGATTTCATTATCAGGATGTGATAATCGTGCTTTCTGTTTTGGCGTCAGACTGGTAAAACGACGAACATTTCAGCAGGTTCTCAACCTGATTCCTAAAGAAGAAGATGGTGAGCTTTTTGAGGATGCACTTGCGCGGGTTCGTCGTTGCATTGGTGGTGGGGCTGCTATGGCACATGAAGATAGTGATAGTGATTTAGAAGTGATTTCAGATTCAGTTTCCGTAAATCTCCGGTGCCCTATGAGTGGTTCTCGAATGAAGGTAGCTGGCAGATTCAAACCTTGTGCTCACATGGGTTGCTTTGATCTCGAAACTTTTGTGGAGCTAAACCAGCGATCTAGGAAGTGGCAATGCCCCATATGCCTCAAGAACTACTCGTTGGAGGACATCATCATTGACCGTTATTTCAATCGCATCACAACTATGATGCAAATTTGTGGGGAAGACATAACAGAGATCAATGTGAAGCCAGATGGTTCTTGGAGTGCAAAGACTAAAGGTGAGTTTAGCGACCTTGCGCAATGGCACTTTCCTGATGGATCTCCATATGTTGGTATGGATTTGGGAACCACAGGCCAGTCCAACCCAGAATCATGTTCAAACCAACACCATAGGTTTATGTCTAATCATGGTGGGGTCAATGAAGTTGGTAAACATCTGGGTGATCCATTAGACAAAGAATTTGAGGCTTTCGAGCAAAAGGTTATAACAATGAGCAGCAGTGACACTTCCTGTGGCAGAGAGGATGAAGACTTTATTATGAATCAAAAAGGCAGTGTTCATATAGATGTCTCCGCATATGATGACAACGAAGTCAATTCACTTTCTCCTAATTTTGCCTCAACATTTGAAATTGGGAATGGTACTTCTGCTGAAGCTGTTAATACTGGTATTATTATTCTCAGTGACTCGGAAGATGAAACAGTCAACTTGGTTTCTCCAAGAGTTATCAACAATACTTGCCCAGTAAGCAGCAGTGCATGCTCCCTGTCTGCAGCTCCTGGCATTTCAGACCCATATGCGTCTTGTTTGGGTCTTTTAAATGGAAATGGTAATGACACTGGGATGTCACAATATGCATATCCTACTGGTACTCACGCCGATCCTGGGTTCCAATTATTTGGTACTGATTCAGATCTCTCCGATGCTTTTATTGATTTGGAGCAGACATCAGTTGATGGTTCAGCTCCAATGAATGGTAACACATTGGTTTCAGATAAAAATCTAGAACCAAGCGGACATGTCGTAAACTCTTCTGTTTCCCATACCAATGCTAACTTGGCCAGCTTGGTTGATAATCCTTTGGGCTTTGGTAGTGAGGACCCCTCAATGCAAAGTTTTCTTCCAAGTCATCCCTCTTGTTTGTTGGAGCAGTCTCATTTTGGACAACATCAACCAGTCCCAAATGGCATTACTAGTGATTGGGTTGCTCTTAGCCTTGGTATAGGTGAAAGTGTTCCCAATGACGTTGATGCAAATGCTGAACCTGCAGACACAAATGGACTATATTCAAGAAACCAATGTGGATCAAATAAGGTGGCTTTAATCACGGATAAAAATGAGGGATCTAAGTCGAAATCTAACAGAGCAAATATAAGGAAACTTTCAGATGGACCTTTCTCCTTTCCCCGTCAGCCACGGTCTGTGAGACCGCGAGTGTATCTGTCAGTAGAATCCAATTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
SAP zf-MIZ

Protein Analysis

856

Amino Acids

93.48

Weight (kDa)

5.23

Isoelectric Point (pI)

37.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 18 - 49 3.6e-07 SAP domain
zf-MIZ PF02891 369 - 417 2.6e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000955)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970
malus_domestica MD01G1111200.v1.1 MD07G1177400.v1.1
prunus_persica Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1
pyrus_communis pycom01g13860 pycom07g17140
rosa_chinensis RchiOBHm_Chr1g0363931
rosa_laevigata RLG00000027534
rosa_multiflora Rmu_sc0001607.1_g000006
rosa_roxburghii Rroxscaffold_4G00292830
rosa_rugosa Rorug01G0311200 Rorug01G0311300
rosa_samantha Rh1AG319200 Rh1BG282200 Rh1CG298700 Rh1DG313600
rosa_wichuraiana Rw1G028290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
AasI GACNNNNNNGTC 1 cut(s) 1694
Acc16I TGCGCA 1 cut(s) 1401
Acc36I ACCTGC 2 cut(s) 949, 2377
AccB1I GGYRCC 1 cut(s) 1116
AccB7I CCANNNNNTGG 2 cut(s) 1433, 2078
AccI GTMKAC 1 cut(s) 712
AccII CGCG 2 cut(s) 1018, 2536
AciI CCGC 5 cut(s) 500, 1018, 1677, 2118, 2534
AclWI GGATC 8 cut(s) 135, 536, 573, 1429, 1541, 1979, 2416, 2455
AcoI YGGCCR 2 cut(s) 832, 2163
AcsI RAATTY 5 cut(s) 343, 643, 857, 1314, 1562
AcuI CTGAAG 1 cut(s) 1776
AcyI GRCGYC 1 cut(s) 927
AfaI GTAC 5 cut(s) 262, 781, 1747, 1975, 2008
AfiI CCNNNNNNNGG 4 cut(s) 1127, 1433, 1989, 2078
AflIII ACRYGT 1 cut(s) 2122
AhlI ACTAGT 1 cut(s) 2297
AjiI CACGTC 1 cut(s) 361
AjnI CCWGG 3 cut(s) 805, 1882, 1987
AjuI GAANNNNNNNTTGG 2 cut(s) 1244, 1276
Alw21I GWGCWC 2 cut(s) 78, 1171
Alw26I GTCTC 4 cut(s) 533, 1678, 2262, 2524
AlwI GGATC 8 cut(s) 135, 536, 573, 1429, 1541, 1979, 2416, 2455
AlwNI CAGNNNCTG 1 cut(s) 1883
AoxI GGCC 4 cut(s) 749, 832, 1456, 2163
ApeKI GCWGC 5 cut(s) 309, 1046, 1599, 1854, 1877
ApoI RAATTY 5 cut(s) 343, 643, 857, 1314, 1562
ArsI GACNNNNNNTTYG 2 cut(s) 1547, 1579
AseI ATTAAT 1 cut(s) 851
Asp700I GAANNNNTTC 1 cut(s) 2337
AspLEI GCGC 2 cut(s) 1018, 1402
AspS9I GGNCC 2 cut(s) 2203, 2495
AsuHPI GGTGA 5 cut(s) 565, 1004, 1394, 1556, 2342
AsuII TTCGAA 1 cut(s) 64
AvaII GGWCC 2 cut(s) 2203, 2495
BaeGI GKGCMC 1 cut(s) 1121
BaeI ACNNNNGTAYC 2 cut(s) 771, 804
BalI TGGCCA 1 cut(s) 2165
BanI GGYRCC 1 cut(s) 1116
BanII GRGCYC 1 cut(s) 78
BbsI GAAGAC 2 cut(s) 1332, 1638
Bbv12I GWGCWC 2 cut(s) 78, 1171
BbvI GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BccI CCATC 8 cut(s) 299, 605, 836, 983, 1349, 1412, 2054, 2486
BceAI ACGGC 1 cut(s) 819
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 3 cut(s) 807, 1884, 1989
BcoDI GTCTC 4 cut(s) 533, 1678, 2262, 2524
BcuI ACTAGT 1 cut(s) 2297
BfaI CTAG 5 cut(s) 327, 569, 1221, 2108, 2298
BfmI CTRYAG 4 cut(s) 310, 576, 1875, 2370
BfuAI ACCTGC 2 cut(s) 949, 2377
BglII AGATCT 2 cut(s) 670, 2017
BisI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
BlsI GCNGC 5 cut(s) 311, 1048, 1601, 1856, 1879
Bme1390I CCNGG 3 cut(s) 807, 1884, 1989
Bme18I GGWCC 2 cut(s) 2203, 2495
BmgBI CACGTC 1 cut(s) 361
BmgT120I GGNCC 2 cut(s) 2203, 2495
BmiI GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
BmrFI CCNGG 3 cut(s) 807, 1884, 1989
BmrI ACTGGG 3 cut(s) 559, 1841, 1953
BmsI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
BmuI ACTGGG 3 cut(s) 559, 1841, 1953
BpiI GAAGAC 2 cut(s) 1332, 1638
BplI GAGNNNNNCTC 4 cut(s) 1117, 1149, 2192, 2224
Bpu10I CCTNAGC 1 cut(s) 15
Bpu14I TTCGAA 1 cut(s) 64
BpuEI CTTGAG 2 cut(s) 62, 1232
BsaBI GATNNNNATC 2 cut(s) 2016, 2103
BsaHI GRCGYC 1 cut(s) 927
BsaI GGTCTC 1 cut(s) 2524
BsaJI CCNNGG 3 cut(s) 1988, 2320, 2519
BsaWI WCCGGW 1 cut(s) 1113
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 4 cut(s) 1127, 1433, 1989, 2078
Bse1I ACTGG 9 cut(s) 494, 554, 939, 1459, 1774, 1847, 1948, 1975, 2279
Bse3DI GCAATG 3 cut(s) 752, 1238, 1409
Bse8I GATNNNNATC 2 cut(s) 2016, 2103
BseBI CCWGG 3 cut(s) 807, 1884, 1989
BseDI CCNNGG 3 cut(s) 1988, 2320, 2519
BseGI GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BseJI GATNNNNATC 2 cut(s) 2016, 2103
BseLI CCNNNNNNNGG 4 cut(s) 1127, 1433, 1989, 2078
BseMI GCAATG 3 cut(s) 752, 1238, 1409
BseMII CTCAG 3 cut(s) 641, 767, 1798
BseNI ACTGG 9 cut(s) 494, 554, 939, 1459, 1774, 1847, 1948, 1975, 2279
BseSI GKGCMC 1 cut(s) 1121
BseXI GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BseYI CCCAGC 2 cut(s) 93, 97
Bsh1236I CGCG 2 cut(s) 1018, 2536
BshFI GGCC 4 cut(s) 751, 834, 1458, 2165
BshNI GGYRCC 1 cut(s) 1116
BsiHKAI GWGCWC 2 cut(s) 78, 1171
BsiSI CCGG 1 cut(s) 1114
BslFI GGGAC 1 cut(s) 2267
BslI CCNNNNNNNGG 4 cut(s) 1127, 1433, 1989, 2078
BsmAI GTCTC 4 cut(s) 533, 1678, 2262, 2524
BsmBI CGTCTC 1 cut(s) 533
BsmFI GGGAC 1 cut(s) 2267
BsnI GGCC 4 cut(s) 751, 834, 1458, 2165
Bso31I GGTCTC 1 cut(s) 2524
Bsp119I TTCGAA 1 cut(s) 64
Bsp1286I GDGCHC 3 cut(s) 78, 1121, 1171
BspACI CCGC 5 cut(s) 500, 1018, 1677, 2118, 2534
BspANI GGCC 4 cut(s) 751, 834, 1458, 2165
BspCNI CTCAG 3 cut(s) 640, 766, 1797
BspFNI CGCG 2 cut(s) 1018, 2536
BspLI GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
BspMAI CTGCAG 4 cut(s) 314, 580, 1879, 2374
BspMI ACCTGC 2 cut(s) 949, 2377
BspPI GGATC 8 cut(s) 135, 536, 573, 1429, 1541, 1979, 2416, 2455
BspT104I TTCGAA 1 cut(s) 64
BspT107I GGYRCC 1 cut(s) 1116
BspTNI GGTCTC 1 cut(s) 2524
BsrDI GCAATG 3 cut(s) 752, 1238, 1409
BsrI ACTGG 9 cut(s) 494, 554, 939, 1459, 1774, 1847, 1948, 1975, 2279
BssECI CCNNGG 3 cut(s) 1988, 2320, 2519
BssNAI GTATAC 1 cut(s) 713
BssNI GRCGYC 1 cut(s) 927
BssT1I CCWWGG 1 cut(s) 2320
Bst1107I GTATAC 1 cut(s) 713
Bst2UI CCWGG 3 cut(s) 807, 1884, 1989
Bst4CI ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
Bst6I CTCTTC 1 cut(s) 2140
BstACI GRCGYC 1 cut(s) 927
BstAPI GCANNNNNTGC 1 cut(s) 1863
BstBI TTCGAA 1 cut(s) 64
BstC8I GCNNGC 3 cut(s) 1150, 1864, 2167
BstDEI CTNAG 7 cut(s) 15, 145, 627, 753, 1784, 2315, 2451
BstDSI CCRYGG 1 cut(s) 2519
BstF5I GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BstFNI CGCG 2 cut(s) 1018, 2536
BstHHI GCGC 2 cut(s) 1018, 1402
BstMAI GTCTC 4 cut(s) 533, 1678, 2262, 2524
BstMWI GCNNNNNNNGC 7 cut(s) 1052, 1213, 1242, 1851, 1863, 2162, 2369
BstNI CCWGG 3 cut(s) 807, 1884, 1989
BstNSI RCATGY 2 cut(s) 1866, 2126
BstSCI CCNGG 3 cut(s) 805, 1882, 1987
BstSFI CTRYAG 4 cut(s) 310, 576, 1875, 2370
BstSLI GKGCMC 1 cut(s) 1121
BstUI CGCG 2 cut(s) 1018, 2536
BstV1I GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BstV2I GAAGAC 2 cut(s) 1332, 1638
BstX2I RGATCY 7 cut(s) 127, 541, 565, 670, 1421, 2017, 2447
BstXI CCANNNNNNTGG 1 cut(s) 2003
BstYI RGATCY 7 cut(s) 127, 541, 565, 670, 1421, 2017, 2447
BstZ17I GTATAC 1 cut(s) 713
BsuRI GGCC 4 cut(s) 751, 834, 1458, 2165
BtgI CCRYGG 1 cut(s) 2519
BtrI CACGTC 1 cut(s) 361
BtsCI GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BtsI GCAGTG 5 cut(s) 319, 585, 1609, 1663, 1864
BtsIMutI CAGTG 8 cut(s) 319, 419, 585, 1609, 1663, 1792, 1864, 1941
BveI ACCTGC 2 cut(s) 949, 2377
Cac8I GCNNGC 3 cut(s) 1150, 1864, 2167
CaiI CAGNNNCTG 1 cut(s) 1883
CfoI GCGC 2 cut(s) 1018, 1402
Cfr13I GGNCC 2 cut(s) 2203, 2495
CseI GACGC 2 cut(s) 916, 1893
Csp6I GTAC 5 cut(s) 261, 780, 1746, 1974, 2007
CspCI CAANNNNNGTGG 2 cut(s) 2400, 2435
CviAII CATG 6 cut(s) 1058, 1174, 1476, 1511, 1863, 2123
CviQI GTAC 5 cut(s) 261, 780, 1746, 1974, 2007
DdeI CTNAG 7 cut(s) 15, 145, 627, 753, 1784, 2315, 2451
DraI TTTAAA 1 cut(s) 1923
DrdI GACNNNNNNGTC 1 cut(s) 1694
DseDI GACNNNNNNGTC 1 cut(s) 1694
EaeI YGGCCR 2 cut(s) 832, 2163
Eam1104I CTCTTC 1 cut(s) 2140
EarI CTCTTC 1 cut(s) 2140
EciI GGCGGA 1 cut(s) 489
Ecl136II GAGCTC 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 2320
Eco24I GRGCYC 1 cut(s) 78
Eco31I GGTCTC 1 cut(s) 2524
Eco47I GGWCC 2 cut(s) 2203, 2495
Eco53kI GAGCTC 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 1776
EcoICRI GAGCTC 1 cut(s) 76
EcoO109I RGGNCCY 1 cut(s) 2203
EcoRII CCWGG 3 cut(s) 805, 1882, 1987
EcoT14I CCWWGG 1 cut(s) 2320
EcoT22I ATGCAT 1 cut(s) 1963
EcoT38I GRGCYC 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 2320
Esp3I CGTCTC 1 cut(s) 533
FaeI CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
FaqI GGGAC 1 cut(s) 2267
FatI CATG 6 cut(s) 1057, 1173, 1475, 1510, 1862, 2122
FauI CCCGC 1 cut(s) 1011
FauNDI CATATG 4 cut(s) 1241, 1429, 1681, 1900
FblI GTMKAC 1 cut(s) 712
Fnu4HI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
FokI GGATG 7 cut(s) 95, 157, 912, 1019, 1640, 1960, 2220
FriOI GRGCYC 1 cut(s) 78
Fsp4HI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
FspBI CTAG 5 cut(s) 327, 569, 1221, 2108, 2298
FspI TGCGCA 1 cut(s) 1401
GlaI GCGC 2 cut(s) 1017, 1401
GluI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
GsaI CCCAGC 2 cut(s) 97, 101
HaeIII GGCC 4 cut(s) 751, 834, 1458, 2165
HapII CCGG 1 cut(s) 1114
HgaI GACGC 2 cut(s) 916, 1893
HhaI GCGC 2 cut(s) 1018, 1402
Hin1I GRCGYC 1 cut(s) 927
Hin1II CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
Hin6I GCGC 2 cut(s) 1016, 1400
HinP1I GCGC 2 cut(s) 1016, 1400
HincII GTYRAC 3 cut(s) 270, 588, 1810
HindII GTYRAC 3 cut(s) 270, 588, 1810
HindIII AAGCTT 1 cut(s) 240
HpaI GTTAAC 1 cut(s) 588
HpaII CCGG 1 cut(s) 1114
HphI GGTGA 5 cut(s) 565, 1004, 1394, 1556, 2342
Hpy166II GTNNAC 8 cut(s) 263, 270, 491, 588, 713, 1535, 1810, 2131
Hpy8I GTNNAC 8 cut(s) 263, 270, 491, 588, 713, 1535, 1810, 2131
Hpy99I CGWCG 2 cut(s) 948, 1029
HpyAV CCTTC 1 cut(s) 1135
HpyCH4III ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
HpyCH4IV ACGT 2 cut(s) 360, 2349
HpyF10VI GCNNNNNNNGC 7 cut(s) 1052, 1213, 1242, 1851, 1863, 2162, 2369
HpyF3I CTNAG 7 cut(s) 15, 145, 627, 753, 1784, 2315, 2451
HpySE526I ACGT 2 cut(s) 360, 2349
Hsp92I GRCGYC 1 cut(s) 927
Hsp92II CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
HspAI GCGC 2 cut(s) 1016, 1400
KspAI GTTAAC 1 cut(s) 588
LmnI GCTCC 8 cut(s) 73, 845, 1204, 1871, 1885, 2044, 2074, 2251
Lsp1109I GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
LweI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
MaeI CTAG 5 cut(s) 327, 569, 1221, 2108, 2298
MaeII ACGT 2 cut(s) 360, 2349
MaeIII GTNAC 7 cut(s) 31, 352, 553, 1604, 1787, 1950, 2081
MfeI CAATTG 2 cut(s) 606, 815
MflI RGATCY 7 cut(s) 127, 541, 565, 670, 1421, 2017, 2447
MhlI GDGCHC 3 cut(s) 78, 1121, 1171
MlsI TGGCCA 1 cut(s) 2165
MluNI TGGCCA 1 cut(s) 2165
MlyI GAGTC 1 cut(s) 1784
MmeI TCCRAC 5 cut(s) 305, 647, 1242, 1488, 2229
Mox20I TGGCCA 1 cut(s) 2165
Mph1103I ATGCAT 1 cut(s) 1963
MroXI GAANNNNTTC 1 cut(s) 2337
MscI TGGCCA 1 cut(s) 2165
MseI TTAA 9 cut(s) 69, 339, 587, 774, 798, 851, 1764, 1922, 2426
MslI CAYNNNNRTG 6 cut(s) 684, 1304, 1542, 1668, 1946, 2151
Msp20I TGGCCA 1 cut(s) 2165
MspA1I CMGCKG 2 cut(s) 97, 398
MspI CCGG 1 cut(s) 1114
MspR9I CCNGG 3 cut(s) 807, 1884, 1989
MunI CAATTG 2 cut(s) 606, 815
MvaI CCWGG 3 cut(s) 807, 1884, 1989
MvnI CGCG 2 cut(s) 1018, 2536
MwoI GCNNNNNNNGC 7 cut(s) 1052, 1213, 1242, 1851, 1863, 2162, 2369
NdeI CATATG 4 cut(s) 1241, 1429, 1681, 1900
NlaIII CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
NlaIV GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
NmuCI GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
NsbI TGCGCA 1 cut(s) 1401
NsiI ATGCAT 1 cut(s) 1963
NspI RCATGY 2 cut(s) 1866, 2126
NspV TTCGAA 1 cut(s) 64
PaeI GCATGC 1 cut(s) 1866
PciI ACATGT 1 cut(s) 2122
PcsI WCGNNNNNNNCGW 2 cut(s) 278, 532
PdmI GAANNNNTTC 1 cut(s) 2337
PflMI CCANNNNNTGG 2 cut(s) 1433, 2078
PkrI GCNGC 5 cut(s) 311, 1048, 1601, 1856, 1879
PleI GAGTC 1 cut(s) 1784
PpsI GAGTC 1 cut(s) 1784
PpuMI RGGWCCY 1 cut(s) 2203
PscI ACATGT 1 cut(s) 2122
PshBI ATTAAT 1 cut(s) 851
PsiI TTATAA 1 cut(s) 1589
Psp124BI GAGCTC 1 cut(s) 78
Psp5II RGGWCCY 1 cut(s) 2203
Psp6I CCWGG 3 cut(s) 805, 1882, 1987
PspFI CCCAGC 2 cut(s) 93, 97
PspGI CCWGG 3 cut(s) 805, 1882, 1987
PspN4I GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
PspPI GGNCC 2 cut(s) 2203, 2495
PspPPI RGGWCCY 1 cut(s) 2203
PstI CTGCAG 4 cut(s) 314, 580, 1879, 2374
PstNI CAGNNNCTG 1 cut(s) 1883
PsuI RGATCY 7 cut(s) 127, 541, 565, 670, 1421, 2017, 2447
PvuII CAGCTG 2 cut(s) 97, 398
RsaI GTAC 5 cut(s) 262, 781, 1747, 1975, 2008
RsaNI GTAC 5 cut(s) 261, 780, 1746, 1974, 2007
RseI CAYNNNNRTG 6 cut(s) 684, 1304, 1542, 1668, 1946, 2151
SacI GAGCTC 1 cut(s) 78
SaqAI TTAA 9 cut(s) 69, 339, 587, 774, 798, 851, 1764, 1922, 2426
SatI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
Sau96I GGNCC 2 cut(s) 2203, 2495
SchI GAGTC 1 cut(s) 1784
ScrFI CCNGG 3 cut(s) 807, 1884, 1989
SduI GDGCHC 3 cut(s) 78, 1121, 1171
SfaNI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
SfcI CTRYAG 4 cut(s) 310, 576, 1875, 2370
SfuI TTCGAA 1 cut(s) 64
SinI GGWCC 2 cut(s) 2203, 2495
SmiMI CAYNNNNRTG 6 cut(s) 684, 1304, 1542, 1668, 1946, 2151
SmlI CTYRAG 2 cut(s) 77, 1247
SmoI CTYRAG 2 cut(s) 77, 1247
SpeI ACTAGT 1 cut(s) 2297
SphI GCATGC 1 cut(s) 1866
SsiI CCGC 5 cut(s) 500, 1018, 1677, 2118, 2534
SspI AATATT 1 cut(s) 601
SspMI CTAG 5 cut(s) 327, 569, 1221, 2108, 2298
SstI GAGCTC 1 cut(s) 78
StyD4I CCNGG 3 cut(s) 805, 1882, 1987
StyI CCWWGG 1 cut(s) 2320
TaaI ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
TaiI ACGT 2 cut(s) 363, 2352
TaqI TCGA 7 cut(s) 64, 135, 207, 1135, 1191, 1575, 2456
TatI WGTACW 1 cut(s) 260
Tru1I TTAA 9 cut(s) 69, 339, 587, 774, 798, 851, 1764, 1922, 2426
Tru9I TTAA 9 cut(s) 69, 339, 587, 774, 798, 851, 1764, 1922, 2426
TscAI CASTG 8 cut(s) 319, 419, 585, 1609, 1663, 1792, 1864, 1948
TseFI GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
TseI GCWGC 5 cut(s) 309, 1046, 1599, 1854, 1877
Tsp45I GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
TspGWI ACGGA 3 cut(s) 287, 1093, 2447
TspRI CASTG 8 cut(s) 319, 419, 585, 1609, 1663, 1792, 1864, 1948
Van91I CCANNNNNTGG 2 cut(s) 1433, 2078
VpaK11BI GGWCC 2 cut(s) 2203, 2495
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 5 cut(s) 343, 643, 857, 1314, 1562
XbaI TCTAGA 2 cut(s) 326, 2107
XceI RCATGY 2 cut(s) 1866, 2126
XcmI CCANNNNNNNNNTGG 2 cut(s) 1359, 2158
XmiI GTMKAC 1 cut(s) 712
XmnI GAANNNNTTC 1 cut(s) 2337
XspI CTAG 5 cut(s) 327, 569, 1221, 2108, 2298
Zsp2I ATGCAT 1 cut(s) 1963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.