Rroxscaffold_4G00292830

MIZ/SP-RING zinc finger

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
13039737 .. 13049376
9640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00292830.1

Sequence Viewer

Length: 2571 bp
ATGGGTTCAGATGCTAAGGAAATGGATTTGGTAACTCAATGCAAGACCAAGTTGGTGTCTTTTCGAGTTAAGGAGCTCAAGGATGTTCTGACCCAGCTGGGTTTTTCAAAGCAAGGGAGGAAGCAGGATCTAATTGACAGAATCTTAGCATCAGTTTCGGACGAAGAAACATCCAATACACGCAGTTTGTCAAAGAAAAAACACATTGAGAAGAATGGAGTAGTGCGAGTAATTGATGAAGCTTACAGAAAGATGCAGAGTACACCGTCAACGGATTCTCCGACAAAGGAACAAAGTGGTTCAGATGGCTGCAGTGTGAAGCCCTCTAGAAAGGAAGTTAAAAATTTGAATGTGACAGATGTGAAGATTTCTTGCCCCTGTAAAAGTTCATTGTCAACTGATTCAATGATACAGTGTGTAGATCCAATGTGTCAAGTTCAGCAACATATTGGTTGCGTGATTATTCCTGAGAAAACAAAGGATTGCAGTCCACCAGTTCCGCCTCTTTTCTACTGTGAAATGTGTCGTCTCAAACGAGCAGATCCTTACTGGGTGACTGTGGTGGATCTAGTATCTGCAGTGAAGTTAAGTGCTTCAAATATTTCAATTGATGGTGCAAATCCAACTCAGAATGTGGAGAAAAATTTTCAACTTTCCAGAGCCAATCGAGATCTACTTCAGCATAATGAATATGATGTTCAGGCTTGGTGTATGCTTCTCAATGATAGTGTTTCATTTAGGTTGCAATGGCCTCAGTCTGCAGAATTACAAGTTAATGGTACGAGTGTTAGGGCAGTTAACAGACCTGGACATCAATTGTTAGGTGCTAATGGCCGTGATGATGGAGCATTAATCACATTTTGCATTGGGGAGGGAATCAATAAGATTTCATTATCAGGATGTGATAATCGTGCTTTCTGTTTTGGAGTCAGACTGGTAAAACGACGAACATTTCAGCAGGTTCTCAACCTGATTCCTAAAGAAGAAGATGGTGAGCTTTTTGAGGATGCACTTGCGCGGGTTCGTCGTTGCATTGGTGGTGGGGCTGCTATGGCACATGAAGATAGTGATAGTGATTTAGAAGTGATTTCAGATTCAGTTTCCGTTAATCTCCGGTGCCCTATGAGTGGTTCTCGAATGAAGGTAGCTGGCAGATTCAAACCTTGTGCTCACATGGGTTGCTTTGATCTCGAAACTTTTGTGGAGCTAAACCAGCGATCTAGGAAGTGGCAATGCCCCATATGCCTCAAGAACTACTCGTTGGAGGACATCATCATTGACTGTTATTTCAACCGCATCACAACTATGATGCGAATTTGTGGGGAAGACATAACAGAGATCAATGTGAAGCCAGATGGTTCTTGGAGTGCAAAGACTAAAGGTGAGTTTAGCGACCTTGCTCAATGGCACTTTCCTGATGGATCTCCATATGTTGGTATGGATTTGGGAACCACAGGCCAGTCCAACCCTGAATCATGTTCAAACCAACACCATAGGTTTATGTCTAATCATGGTGGGGTCAGTGAAGTTGGTAAACATCTGGGTGATCCATTAGACAAAGAATTTGAGGCTTTTGAGCAAAAGGTTATAACAATGAGCAGCAGTGACACTTCCTGTGGCAGAGAGGATGAAGACTTTATTATGAATCACAAAAGCAGTGTTCATATAGATGTCTCTGCATATGATGACAATGAAGTCAATTCACTTTCTCCTAATTTTGCCTCAACATTTGAAATTGGGAATGGTATTTCTGCTGAAGCTGTTAATGCTGGTATTATTATTCTCAGTGACTCAGAAGATGAAACAGTCAACTTGGTTTCTCCAAGAGTTATCAATAATACTTACCCGGTAAGCAGCAGTGCATGCTCCCTGTCTGCAGCTCCTGGCATTTCAGACCCATATGCGTCTTGTTTGGGTCTTTTAAATGGAAATGGTAATGACACTGGGATGTCACAATATGCATATCCTACTGGTACTCACGCTGATCCTGGGTTCCAATTATTTGGTACTGATTCAGATCTCTCCGATGCTTTTATTGATTTGGAGCAGACATCAGTTGATGGTTCAGCTCCAATGAATGGTAACACATTGGTTTCAGATAAAAATCTAGAACCAAGCGGACATGTCTTAAACTCTTCTGTTTCCCATACCAATGCTAACTTGGCTAGCTTGGTTGATAATCCTTTGGGCTTTGGTAGTGAGGAGCCCTCAATGCAAAGTTTTCTTCCAAGTCATCCCTCTTGTTTGTTGGAGCAGTCTGATTTTGGACAACATCAACCGGTCTCAAATGGCATTACTAGTGATTGGGTTGCTCTTAGCCTTGGTATAGGTGAAAGTGTTCCCAATGACGTTGATGCAAATGCTGAACCTGCAGACACAAATGGACTATATTCAAGAAACCAATGTGGATCAAATAAGGTGGCTTTAATCACGGATAGAAATGAGGGATCTAAGTCGAAATCTAACAAAGCAAATATAAGGAAACTTTCAGATGGACCTTTCTCCTTTCCCCGTCAGCCACGGTCTGTGAGACCACGAGTGTATCTGTCAGTAGATTCCAATTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

856

Amino Acids

93.43

Weight (kDa)

5.13

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 18 - 49 4.9e-08 SAP domain
zf-MIZ PF02891 369 - 417 2.6e-19 MIZ/SP-RING zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000955)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970
malus_domestica MD01G1111200.v1.1 MD07G1177400.v1.1
prunus_persica Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1
pyrus_communis pycom01g13860 pycom07g17140
rosa_chinensis RchiOBHm_Chr1g0363931
rosa_laevigata RLG00000027534
rosa_multiflora Rmu_sc0001607.1_g000006
rosa_roxburghii Rroxscaffold_4G00292830
rosa_rugosa Rorug01G0311200 Rorug01G0311300
rosa_samantha Rh1AG319200 Rh1BG282200 Rh1CG298700 Rh1DG313600
rosa_wichuraiana Rw1G028290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1589
AasI GACNNNNNNGTC 1 cut(s) 1694
Acc36I ACCTGC 2 cut(s) 949, 2377
AccB1I GGYRCC 1 cut(s) 1116
AccB7I CCANNNNNTGG 2 cut(s) 1433, 2078
AccII CGCG 1 cut(s) 1018
AciI CCGC 4 cut(s) 500, 1018, 1294, 2118
AclWI GGATC 9 cut(s) 135, 416, 536, 573, 1429, 1541, 1979, 2416, 2455
AcoI YGGCCR 1 cut(s) 832
AcsI RAATTY 4 cut(s) 343, 643, 1314, 1562
AcuI CTGAAG 2 cut(s) 662, 1776
AfaI GTAC 4 cut(s) 262, 781, 1975, 2008
AfiI CCNNNNNNNGG 3 cut(s) 1127, 1433, 2078
AflIII ACRYGT 1 cut(s) 2122
AgeI ACCGGT 1 cut(s) 2278
AhlI ACTAGT 1 cut(s) 2297
AjnI CCWGG 3 cut(s) 805, 1882, 1987
AjuI GAANNNNNNNTTGG 2 cut(s) 1244, 1276
Alw21I GWGCWC 2 cut(s) 78, 1171
Alw26I GTCTC 4 cut(s) 533, 1678, 2287, 2524
AlwI GGATC 9 cut(s) 135, 416, 536, 573, 1429, 1541, 1979, 2416, 2455
AlwNI CAGNNNCTG 1 cut(s) 1883
AoxI GGCC 3 cut(s) 749, 832, 1456
ApeKI GCWGC 5 cut(s) 309, 1046, 1599, 1854, 1877
ApoI RAATTY 4 cut(s) 343, 643, 1314, 1562
ArsI GACNNNNNNTTYG 2 cut(s) 1547, 1579
AseI ATTAAT 1 cut(s) 851
AsiGI ACCGGT 1 cut(s) 2278
Asp700I GAANNNNTTC 1 cut(s) 2337
AspLEI GCGC 1 cut(s) 1018
AspS9I GGNCC 1 cut(s) 2495
AsuC2I CCSGG 1 cut(s) 1847
AsuHPI GGTGA 5 cut(s) 565, 1004, 1394, 1556, 2342
AsuNHI GCTAGC 1 cut(s) 2165
AvaII GGWCC 1 cut(s) 2495
BaeGI GKGCMC 1 cut(s) 1121
BaeI ACNNNNGTAYC 4 cut(s) 771, 804, 2525, 2558
BanI GGYRCC 1 cut(s) 1116
BanII GRGCYC 2 cut(s) 78, 2208
BauI CACGAG 1 cut(s) 2535
BbsI GAAGAC 2 cut(s) 1332, 1638
Bbv12I GWGCWC 2 cut(s) 78, 1171
BbvI GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BccI CCATC 8 cut(s) 299, 605, 836, 983, 1349, 1412, 2054, 2486
BceAI ACGGC 1 cut(s) 819
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 3 cut(s) 807, 1884, 1989
BcnI CCSGG 1 cut(s) 1847
BcoDI GTCTC 4 cut(s) 533, 1678, 2287, 2524
BcuI ACTAGT 1 cut(s) 2297
BfaI CTAG 6 cut(s) 327, 569, 1221, 2108, 2166, 2298
BfmI CTRYAG 5 cut(s) 310, 576, 759, 1875, 2370
BfuAI ACCTGC 2 cut(s) 949, 2377
BglII AGATCT 2 cut(s) 670, 2017
BisI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
BlsI GCNGC 5 cut(s) 311, 1048, 1601, 1856, 1879
Bme1390I CCNGG 4 cut(s) 807, 1847, 1884, 1989
Bme18I GGWCC 1 cut(s) 2495
BmgT120I GGNCC 1 cut(s) 2495
BmiI GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
BmrFI CCNGG 4 cut(s) 807, 1847, 1884, 1989
BmrI ACTGGG 2 cut(s) 559, 1953
BmsI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
BmtI GCTAGC 1 cut(s) 2169
BmuI ACTGGG 2 cut(s) 559, 1953
BpiI GAAGAC 2 cut(s) 1332, 1638
BplI GAGNNNNNCTC 4 cut(s) 1117, 1149, 2192, 2224
Bpu10I CCTNAGC 1 cut(s) 15
BpuEI CTTGAG 2 cut(s) 62, 1232
BpuMI CCSGG 1 cut(s) 1847
BsaBI GATNNNNATC 2 cut(s) 2016, 2103
BsaI GGTCTC 2 cut(s) 2287, 2524
BsaJI CCNNGG 3 cut(s) 1988, 2320, 2519
BsaWI WCCGGW 2 cut(s) 1113, 2278
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 3 cut(s) 1127, 1433, 2078
Bse118I RCCGGY 1 cut(s) 2278
Bse1I ACTGG 6 cut(s) 494, 554, 939, 1459, 1948, 1975
Bse3DI GCAATG 2 cut(s) 752, 1238
Bse8I GATNNNNATC 2 cut(s) 2016, 2103
BseBI CCWGG 3 cut(s) 807, 1884, 1989
BseDI CCNNGG 3 cut(s) 1988, 2320, 2519
BseGI GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BseJI GATNNNNATC 2 cut(s) 2016, 2103
BseLI CCNNNNNNNGG 3 cut(s) 1127, 1433, 2078
BseMI GCAATG 2 cut(s) 752, 1238
BseMII CTCAG 5 cut(s) 459, 641, 767, 1798, 1806
BseNI ACTGG 6 cut(s) 494, 554, 939, 1459, 1948, 1975
BseRI GAGGAG 1 cut(s) 2216
BseSI GKGCMC 1 cut(s) 1121
BseXI GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BseYI CCCAGC 2 cut(s) 93, 97
Bsh1236I CGCG 1 cut(s) 1018
BshFI GGCC 3 cut(s) 751, 834, 1458
BshNI GGYRCC 1 cut(s) 1116
BshTI ACCGGT 1 cut(s) 2278
BsiHKAI GWGCWC 2 cut(s) 78, 1171
BsiSI CCGG 3 cut(s) 1114, 1847, 2279
BslI CCNNNNNNNGG 3 cut(s) 1127, 1433, 2078
BsmAI GTCTC 4 cut(s) 533, 1678, 2287, 2524
BsmBI CGTCTC 1 cut(s) 533
BsnI GGCC 3 cut(s) 751, 834, 1458
Bso31I GGTCTC 2 cut(s) 2287, 2524
Bsp1286I GDGCHC 4 cut(s) 78, 1121, 1171, 2208
BspACI CCGC 4 cut(s) 500, 1018, 1294, 2118
BspANI GGCC 3 cut(s) 751, 834, 1458
BspCNI CTCAG 5 cut(s) 460, 640, 766, 1797, 1805
BspFNI CGCG 1 cut(s) 1018
BspLI GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
BspMAI CTGCAG 5 cut(s) 314, 580, 763, 1879, 2374
BspMI ACCTGC 2 cut(s) 949, 2377
BspOI GCTAGC 1 cut(s) 2169
BspPI GGATC 9 cut(s) 135, 416, 536, 573, 1429, 1541, 1979, 2416, 2455
BspT107I GGYRCC 1 cut(s) 1116
BspTNI GGTCTC 2 cut(s) 2287, 2524
BsrDI GCAATG 2 cut(s) 752, 1238
BsrFI RCCGGY 1 cut(s) 2278
BsrI ACTGG 6 cut(s) 494, 554, 939, 1459, 1948, 1975
BssAI RCCGGY 1 cut(s) 2278
BssECI CCNNGG 3 cut(s) 1988, 2320, 2519
BssSI CACGAG 1 cut(s) 2535
BssT1I CCWWGG 1 cut(s) 2320
Bst2BI CACGAG 1 cut(s) 2535
Bst2UI CCWGG 3 cut(s) 807, 1884, 1989
Bst4CI ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
Bst6I CTCTTC 1 cut(s) 2140
BstAPI GCANNNNNTGC 1 cut(s) 1863
BstC8I GCNNGC 3 cut(s) 1150, 1864, 2167
BstDEI CTNAG 9 cut(s) 15, 145, 468, 627, 753, 1784, 1792, 2315, 2451
BstDSI CCRYGG 1 cut(s) 2519
BstF5I GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BstFNI CGCG 1 cut(s) 1018
BstHHI GCGC 1 cut(s) 1018
BstMAI GTCTC 4 cut(s) 533, 1678, 2287, 2524
BstMWI GCNNNNNNNGC 8 cut(s) 1052, 1213, 1242, 1766, 1863, 2162, 2212, 2369
BstNI CCWGG 3 cut(s) 807, 1884, 1989
BstNSI RCATGY 2 cut(s) 1866, 2126
BstSCI CCNGG 4 cut(s) 805, 1845, 1882, 1987
BstSFI CTRYAG 5 cut(s) 310, 576, 759, 1875, 2370
BstSLI GKGCMC 1 cut(s) 1121
BstUI CGCG 1 cut(s) 1018
BstV1I GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
BstV2I GAAGAC 2 cut(s) 1332, 1638
BstX2I RGATCY 8 cut(s) 127, 421, 541, 565, 670, 1421, 2017, 2447
BstXI CCANNNNNNTGG 1 cut(s) 2003
BstYI RGATCY 8 cut(s) 127, 421, 541, 565, 670, 1421, 2017, 2447
BsuRI GGCC 3 cut(s) 751, 834, 1458
BtgI CCRYGG 1 cut(s) 2519
BtsCI GGATG 7 cut(s) 88, 170, 905, 1012, 1633, 1953, 2233
BtsI GCAGTG 5 cut(s) 319, 585, 1609, 1663, 1864
BtsIMutI CAGTG 9 cut(s) 319, 419, 585, 1528, 1609, 1663, 1792, 1864, 1941
BveI ACCTGC 2 cut(s) 949, 2377
Cac8I GCNNGC 3 cut(s) 1150, 1864, 2167
CaiI CAGNNNCTG 1 cut(s) 1883
CfoI GCGC 1 cut(s) 1018
Cfr10I RCCGGY 1 cut(s) 2278
Cfr13I GGNCC 1 cut(s) 2495
CseI GACGC 1 cut(s) 1893
Csp6I GTAC 4 cut(s) 261, 780, 1974, 2007
CspAI ACCGGT 1 cut(s) 2278
CspCI CAANNNNNGTGG 2 cut(s) 2400, 2435
CviAII CATG 6 cut(s) 1058, 1174, 1476, 1511, 1863, 2123
CviQI GTAC 4 cut(s) 261, 780, 1974, 2007
DdeI CTNAG 9 cut(s) 15, 145, 468, 627, 753, 1784, 1792, 2315, 2451
DraI TTTAAA 1 cut(s) 1923
DrdI GACNNNNNNGTC 1 cut(s) 1694
DseDI GACNNNNNNGTC 1 cut(s) 1694
EaeI YGGCCR 1 cut(s) 832
Eam1104I CTCTTC 1 cut(s) 2140
EarI CTCTTC 1 cut(s) 2140
EciI GGCGGA 1 cut(s) 489
Ecl136II GAGCTC 1 cut(s) 76
Eco130I CCWWGG 1 cut(s) 2320
Eco24I GRGCYC 2 cut(s) 78, 2208
Eco31I GGTCTC 2 cut(s) 2287, 2524
Eco47I GGWCC 1 cut(s) 2495
Eco53kI GAGCTC 1 cut(s) 76
Eco57I CTGAAG 2 cut(s) 662, 1776
EcoICRI GAGCTC 1 cut(s) 76
EcoRII CCWGG 3 cut(s) 805, 1882, 1987
EcoT14I CCWWGG 1 cut(s) 2320
EcoT22I ATGCAT 1 cut(s) 1963
EcoT38I GRGCYC 2 cut(s) 78, 2208
ErhI CCWWGG 1 cut(s) 2320
Esp3I CGTCTC 1 cut(s) 533
FaeI CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
FatI CATG 6 cut(s) 1057, 1173, 1475, 1510, 1862, 2122
FauI CCCGC 1 cut(s) 1011
FauNDI CATATG 4 cut(s) 1241, 1429, 1681, 1900
Fnu4HI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
FokI GGATG 7 cut(s) 95, 157, 912, 1019, 1640, 1960, 2220
FriOI GRGCYC 2 cut(s) 78, 2208
Fsp4HI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
FspBI CTAG 6 cut(s) 327, 569, 1221, 2108, 2166, 2298
GlaI GCGC 1 cut(s) 1017
GluI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
GsaI CCCAGC 2 cut(s) 97, 101
HaeIII GGCC 3 cut(s) 751, 834, 1458
HapII CCGG 3 cut(s) 1114, 1847, 2279
HgaI GACGC 1 cut(s) 1893
HhaI GCGC 1 cut(s) 1018
Hin1II CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
Hin6I GCGC 1 cut(s) 1016
HinP1I GCGC 1 cut(s) 1016
HincII GTYRAC 4 cut(s) 270, 396, 799, 1810
HindII GTYRAC 4 cut(s) 270, 396, 799, 1810
HindIII AAGCTT 1 cut(s) 240
HpaI GTTAAC 1 cut(s) 799
HpaII CCGG 3 cut(s) 1114, 1847, 2279
HphI GGTGA 5 cut(s) 565, 1004, 1394, 1556, 2342
Hpy166II GTNNAC 7 cut(s) 263, 270, 396, 491, 799, 1535, 1810
Hpy8I GTNNAC 7 cut(s) 263, 270, 396, 491, 799, 1535, 1810
Hpy99I CGWCG 2 cut(s) 948, 1029
HpyAV CCTTC 1 cut(s) 1135
HpyCH4III ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
HpyCH4IV ACGT 1 cut(s) 2349
HpyF10VI GCNNNNNNNGC 8 cut(s) 1052, 1213, 1242, 1766, 1863, 2162, 2212, 2369
HpyF3I CTNAG 9 cut(s) 15, 145, 468, 627, 753, 1784, 1792, 2315, 2451
HpySE526I ACGT 1 cut(s) 2349
Hsp92II CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
HspAI GCGC 1 cut(s) 1016
KspAI GTTAAC 1 cut(s) 799
LmnI GCTCC 9 cut(s) 73, 845, 1204, 1871, 1885, 2044, 2074, 2203, 2251
Lsp1109I GCAGC 5 cut(s) 296, 1033, 1611, 1866, 1889
LweI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
MaeI CTAG 6 cut(s) 327, 569, 1221, 2108, 2166, 2298
MaeII ACGT 1 cut(s) 2349
MaeIII GTNAC 7 cut(s) 31, 352, 553, 1604, 1787, 1950, 2081
MfeI CAATTG 2 cut(s) 606, 815
MflI RGATCY 8 cut(s) 127, 421, 541, 565, 670, 1421, 2017, 2447
MhlI GDGCHC 4 cut(s) 78, 1121, 1171, 2208
MlyI GAGTC 2 cut(s) 936, 1784
MmeI TCCRAC 5 cut(s) 305, 647, 1242, 1488, 2229
Mph1103I ATGCAT 1 cut(s) 1963
MroXI GAANNNNTTC 1 cut(s) 2337
MslI CAYNNNNRTG 5 cut(s) 1304, 1542, 1668, 1946, 2151
MspA1I CMGCKG 1 cut(s) 97
MspI CCGG 3 cut(s) 1114, 1847, 2279
MspR9I CCNGG 4 cut(s) 807, 1847, 1884, 1989
MunI CAATTG 2 cut(s) 606, 815
MvaI CCWGG 3 cut(s) 807, 1884, 1989
MvnI CGCG 1 cut(s) 1018
MwoI GCNNNNNNNGC 8 cut(s) 1052, 1213, 1242, 1766, 1863, 2162, 2212, 2369
NciI CCSGG 1 cut(s) 1847
NdeI CATATG 4 cut(s) 1241, 1429, 1681, 1900
NheI GCTAGC 1 cut(s) 2165
NlaIII CATG 6 cut(s) 1061, 1177, 1479, 1514, 1866, 2126
NlaIV GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
NmuCI GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
NsiI ATGCAT 1 cut(s) 1963
NspI RCATGY 2 cut(s) 1866, 2126
PaeI GCATGC 1 cut(s) 1866
PciI ACATGT 1 cut(s) 2122
PcsI WCGNNNNNNNCGW 2 cut(s) 278, 532
PdmI GAANNNNTTC 1 cut(s) 2337
PflMI CCANNNNNTGG 2 cut(s) 1433, 2078
PinAI ACCGGT 1 cut(s) 2278
PkrI GCNGC 5 cut(s) 311, 1048, 1601, 1856, 1879
PleI GAGTC 2 cut(s) 935, 1784
PpsI GAGTC 2 cut(s) 935, 1784
PscI ACATGT 1 cut(s) 2122
PshBI ATTAAT 1 cut(s) 851
PsiI TTATAA 1 cut(s) 1589
Psp124BI GAGCTC 1 cut(s) 78
Psp6I CCWGG 3 cut(s) 805, 1882, 1987
PspFI CCCAGC 2 cut(s) 93, 97
PspGI CCWGG 3 cut(s) 805, 1882, 1987
PspN4I GGNNCC 4 cut(s) 1118, 1450, 1994, 2205
PspPI GGNCC 1 cut(s) 2495
PstI CTGCAG 5 cut(s) 314, 580, 763, 1879, 2374
PstNI CAGNNNCTG 1 cut(s) 1883
PsuI RGATCY 8 cut(s) 127, 421, 541, 565, 670, 1421, 2017, 2447
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 4 cut(s) 262, 781, 1975, 2008
RsaNI GTAC 4 cut(s) 261, 780, 1974, 2007
RseI CAYNNNNRTG 5 cut(s) 1304, 1542, 1668, 1946, 2151
SacI GAGCTC 1 cut(s) 78
SatI GCNGC 5 cut(s) 310, 1047, 1600, 1855, 1878
Sau96I GGNCC 1 cut(s) 2495
SchI GAGTC 2 cut(s) 936, 1784
ScrFI CCNGG 4 cut(s) 807, 1847, 1884, 1989
SduI GDGCHC 4 cut(s) 78, 1121, 1171, 2208
SfaNI GCATC 7 cut(s) 158, 243, 997, 1299, 1305, 2017, 2344
SfcI CTRYAG 5 cut(s) 310, 576, 759, 1875, 2370
SinI GGWCC 1 cut(s) 2495
SmiMI CAYNNNNRTG 5 cut(s) 1304, 1542, 1668, 1946, 2151
SmlI CTYRAG 2 cut(s) 77, 1247
SmoI CTYRAG 2 cut(s) 77, 1247
SpeI ACTAGT 1 cut(s) 2297
SphI GCATGC 1 cut(s) 1866
SsiI CCGC 4 cut(s) 500, 1018, 1294, 2118
SspI AATATT 1 cut(s) 601
SspMI CTAG 6 cut(s) 327, 569, 1221, 2108, 2166, 2298
SstI GAGCTC 1 cut(s) 78
StyD4I CCNGG 4 cut(s) 805, 1845, 1882, 1987
StyI CCWWGG 1 cut(s) 2320
TaaI ACNGT 7 cut(s) 267, 414, 515, 559, 1283, 1807, 2523
TaiI ACGT 1 cut(s) 2352
TaqI TCGA 5 cut(s) 64, 667, 1135, 1191, 2456
TatI WGTACW 1 cut(s) 260
TscAI CASTG 9 cut(s) 319, 419, 585, 1528, 1609, 1663, 1792, 1864, 1948
TseFI GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
TseI GCWGC 5 cut(s) 309, 1046, 1599, 1854, 1877
Tsp45I GTSAC 5 cut(s) 352, 553, 1604, 1787, 1950
TspGWI ACGGA 3 cut(s) 287, 1093, 2447
TspRI CASTG 9 cut(s) 319, 419, 585, 1528, 1609, 1663, 1792, 1864, 1948
Van91I CCANNNNNTGG 2 cut(s) 1433, 2078
VpaK11BI GGWCC 1 cut(s) 2495
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 4 cut(s) 343, 643, 1314, 1562
XbaI TCTAGA 2 cut(s) 326, 2107
XceI RCATGY 2 cut(s) 1866, 2126
XcmI CCANNNNNNNNNTGG 2 cut(s) 1359, 2158
XmnI GAANNNNTTC 1 cut(s) 2337
XspI CTAG 6 cut(s) 327, 569, 1221, 2108, 2166, 2298
Zsp2I ATGCAT 1 cut(s) 1963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.