MIZ/SP-RING zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2975 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3080 |
| Acc16I | TGCGCA | 1 cut(s) | 2787 |
| Acc36I | ACCTGC | 2 cut(s) | 2335, 3763 |
| AccB1I | GGYRCC | 5 cut(s) | 223, 527, 1235, 1307, 2502 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1304, 2819, 3464 |
| AccI | GTMKAC | 1 cut(s) | 2098 |
| AccII | CGCG | 3 cut(s) | 303, 377, 2404 |
| AciI | CCGC | 9 cut(s) | 26, 72, 301, 492, 721, 1886, 2404, 3063, 3504 |
| AcoI | YGGCCR | 2 cut(s) | 780, 2218 |
| AcsI | RAATTY | 8 cut(s) | 162, 312, 800, 1729, 2029, 2243, 2700, 2948 |
| AcuI | CTGAAG | 5 cut(s) | 861, 921, 1038, 1146, 3162 |
| AcyI | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| AfaI | GTAC | 7 cut(s) | 649, 682, 1648, 2167, 3133, 3361, 3394 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 985, 1173, 1304, 2513, 2819, 3464 |
| AflII | CTTAAG | 1 cut(s) | 934 |
| AflIII | ACRYGT | 1 cut(s) | 3508 |
| AhlI | ACTAGT | 1 cut(s) | 3683 |
| AjiI | CACGTC | 1 cut(s) | 1747 |
| AjnI | CCWGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2630, 2662 |
| Alw21I | GWGCWC | 5 cut(s) | 256, 978, 1223, 1464, 2557 |
| Alw26I | GTCTC | 4 cut(s) | 924, 1919, 3064, 3673 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 826, 3269 |
| Ama87I | CYCGRG | 1 cut(s) | 370 |
| AoxI | GGCC | 8 cut(s) | 11, 566, 669, 780, 1212, 2135, 2218, 2842 |
| ApoI | RAATTY | 8 cut(s) | 162, 312, 800, 1729, 2029, 2243, 2700, 2948 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2933, 2965 |
| AseI | ATTAAT | 1 cut(s) | 2237 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1390, 3723, 4027 |
| AspLEI | GCGC | 6 cut(s) | 377, 519, 1238, 1310, 2404, 2788 |
| AspS9I | GGNCC | 4 cut(s) | 567, 1135, 3589, 3881 |
| AsuHPI | GGTGA | 7 cut(s) | 70, 178, 1951, 2390, 2780, 2942, 3728 |
| AsuNHI | GCTAGC | 1 cut(s) | 3551 |
| AvaI | CYCGRG | 1 cut(s) | 370 |
| AvaII | GGWCC | 3 cut(s) | 1135, 3589, 3881 |
| AxyI | CCTNAGG | 1 cut(s) | 831 |
| BaeGI | GKGCMC | 1 cut(s) | 2507 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2157, 2190, 3351, 3384 |
| BalI | TGGCCA | 1 cut(s) | 782 |
| BanI | GGYRCC | 5 cut(s) | 223, 527, 1235, 1307, 2502 |
| BanII | GRGCYC | 3 cut(s) | 978, 1223, 1464 |
| BbsI | GAAGAC | 2 cut(s) | 2718, 3024 |
| Bbv12I | GWGCWC | 5 cut(s) | 256, 978, 1223, 1464, 2557 |
| BbvCI | CCTCAGC | 1 cut(s) | 1046 |
| BceAI | ACGGC | 1 cut(s) | 2205 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1524, 1558 |
| BciT130I | CCWGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| BcoDI | GTCTC | 4 cut(s) | 924, 1919, 3064, 3673 |
| BcuI | ACTAGT | 1 cut(s) | 3683 |
| BfmI | CTRYAG | 7 cut(s) | 135, 582, 818, 1696, 1962, 3261, 3756 |
| BfoI | RGCGCY | 2 cut(s) | 1239, 1311 |
| BfrI | CTTAAG | 1 cut(s) | 934 |
| BfuAI | ACCTGC | 2 cut(s) | 2335, 3763 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 10, 525 |
| BglII | AGATCT | 3 cut(s) | 705, 2056, 3403 |
| BlpI | GCTNAGC | 2 cut(s) | 412, 1222 |
| Bme1390I | CCNGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| Bme18I | GGWCC | 3 cut(s) | 1135, 3589, 3881 |
| BmeT110I | CYCGRG | 1 cut(s) | 370 |
| BmgBI | CACGTC | 1 cut(s) | 1747 |
| BmgT120I | GGNCC | 4 cut(s) | 567, 1135, 3589, 3881 |
| BmrFI | CCNGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| BmrI | ACTGGG | 4 cut(s) | 693, 1945, 3227, 3339 |
| BmtI | GCTAGC | 1 cut(s) | 3555 |
| BmuI | ACTGGG | 4 cut(s) | 693, 1945, 3227, 3339 |
| BpiI | GAAGAC | 2 cut(s) | 2718, 3024 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2503, 2535, 3578, 3610 |
| BpmI | CTGGAG | 1 cut(s) | 4001 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1046, 1401 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 412, 1222 |
| BpuEI | CTTGAG | 4 cut(s) | 83, 356, 1448, 2618 |
| Bsa29I | ATCGAT | 1 cut(s) | 1146 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3402, 3489 |
| BsaHI | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| BsaJI | CCNNGG | 4 cut(s) | 8, 672, 3374, 3706 |
| BsaWI | WCCGGW | 1 cut(s) | 2499 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 985, 1173, 1304, 2513, 2819, 3464 |
| Bse21I | CCTNAGG | 1 cut(s) | 831 |
| Bse3DI | GCAATG | 4 cut(s) | 277, 2138, 2624, 2795 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3402, 3489 |
| BseBI | CCWGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| BseCI | ATCGAT | 1 cut(s) | 1146 |
| BseDI | CCNNGG | 4 cut(s) | 8, 672, 3374, 3706 |
| BseGI | GGATG | 8 cut(s) | 682, 1474, 1556, 2291, 2398, 3019, 3339, 3619 |
| BseJI | GATNNNNATC | 2 cut(s) | 3402, 3489 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 985, 1173, 1304, 2513, 2819, 3464 |
| BseMI | GCAATG | 4 cut(s) | 277, 2138, 2624, 2795 |
| BseRI | GAGGAG | 3 cut(s) | 40, 181, 770 |
| BseSI | GKGCMC | 1 cut(s) | 2507 |
| BseYI | CCCAGC | 2 cut(s) | 1479, 1483 |
| BsgI | GTGCAG | 1 cut(s) | 1021 |
| Bsh1236I | CGCG | 3 cut(s) | 303, 377, 2404 |
| BshFI | GGCC | 8 cut(s) | 13, 568, 671, 782, 1214, 2137, 2220, 2844 |
| BshNI | GGYRCC | 5 cut(s) | 223, 527, 1235, 1307, 2502 |
| BshVI | ATCGAT | 1 cut(s) | 1146 |
| BsiHKAI | GWGCWC | 5 cut(s) | 256, 978, 1223, 1464, 2557 |
| BsiHKCI | CYCGRG | 1 cut(s) | 370 |
| BsiSI | CCGG | 1 cut(s) | 2500 |
| BslFI | GGGAC | 3 cut(s) | 1042, 1280, 3921 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 985, 1173, 1304, 2513, 2819, 3464 |
| BsmAI | GTCTC | 4 cut(s) | 924, 1919, 3064, 3673 |
| BsmBI | CGTCTC | 1 cut(s) | 1919 |
| BsmFI | GGGAC | 3 cut(s) | 1042, 1280, 3921 |
| BsmI | GAATGC | 2 cut(s) | 400, 507 |
| BsnI | GGCC | 8 cut(s) | 13, 568, 671, 782, 1214, 2137, 2220, 2844 |
| BsoBI | CYCGRG | 1 cut(s) | 370 |
| Bsp1286I | GDGCHC | 6 cut(s) | 256, 978, 1223, 1464, 2507, 2557 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 412, 1222 |
| BspACI | CCGC | 9 cut(s) | 26, 72, 301, 492, 721, 1886, 2404, 3063, 3504 |
| BspANI | GGCC | 8 cut(s) | 13, 568, 671, 782, 1214, 2137, 2220, 2844 |
| BspDI | ATCGAT | 1 cut(s) | 1146 |
| BspFNI | CGCG | 3 cut(s) | 303, 377, 2404 |
| BspMAI | CTGCAG | 6 cut(s) | 139, 822, 1700, 1966, 3265, 3760 |
| BspMI | ACCTGC | 2 cut(s) | 2335, 3763 |
| BspOI | GCTAGC | 1 cut(s) | 3555 |
| BspQI | GCTCTTC | 1 cut(s) | 966 |
| BspT107I | GGYRCC | 5 cut(s) | 223, 527, 1235, 1307, 2502 |
| BspTI | CTTAAG | 1 cut(s) | 934 |
| BsrDI | GCAATG | 4 cut(s) | 277, 2138, 2624, 2795 |
| BssECI | CCNNGG | 4 cut(s) | 8, 672, 3374, 3706 |
| BssNAI | GTATAC | 1 cut(s) | 2099 |
| BssNI | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| BssT1I | CCWWGG | 3 cut(s) | 8, 672, 3706 |
| Bst1107I | GTATAC | 1 cut(s) | 2099 |
| Bst2UI | CCWGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| Bst4CI | ACNGT | 8 cut(s) | 1056, 1315, 1653, 1800, 1901, 1945, 2669, 3193 |
| Bst6I | CTCTTC | 9 cut(s) | 837, 855, 861, 897, 966, 1014, 1019, 1122, 3526 |
| BstACI | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| BstAFI | CTTAAG | 1 cut(s) | 934 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 826, 3249 |
| BstC8I | GCNNGC | 7 cut(s) | 69, 390, 897, 1228, 2536, 3250, 3553 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| BstF5I | GGATG | 8 cut(s) | 682, 1474, 1556, 2291, 2398, 3019, 3339, 3619 |
| BstFNI | CGCG | 3 cut(s) | 303, 377, 2404 |
| BstH2I | RGCGCY | 2 cut(s) | 1239, 1311 |
| BstHHI | GCGC | 6 cut(s) | 377, 519, 1238, 1310, 2404, 2788 |
| BstMAI | GTCTC | 4 cut(s) | 924, 1919, 3064, 3673 |
| BstNI | CCWGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| BstNSI | RCATGY | 3 cut(s) | 440, 3252, 3512 |
| BstSCI | CCNGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| BstSFI | CTRYAG | 7 cut(s) | 135, 582, 818, 1696, 1962, 3261, 3756 |
| BstSLI | GKGCMC | 1 cut(s) | 2507 |
| BstUI | CGCG | 3 cut(s) | 303, 377, 2404 |
| BstV2I | GAAGAC | 2 cut(s) | 2718, 3024 |
| BstX2I | RGATCY | 9 cut(s) | 705, 1066, 1513, 1927, 1951, 2056, 2807, 3403, 3833 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3389 |
| BstYI | RGATCY | 9 cut(s) | 705, 1066, 1513, 1927, 1951, 2056, 2807, 3403, 3833 |
| BstZ17I | GTATAC | 1 cut(s) | 2099 |
| Bsu15I | ATCGAT | 1 cut(s) | 1146 |
| Bsu36I | CCTNAGG | 1 cut(s) | 831 |
| BsuRI | GGCC | 8 cut(s) | 13, 568, 671, 782, 1214, 2137, 2220, 2844 |
| BsuTUI | ATCGAT | 1 cut(s) | 1146 |
| BtgZI | GCGATG | 2 cut(s) | 755, 4032 |
| BtrI | CACGTC | 1 cut(s) | 1747 |
| BtsCI | GGATG | 8 cut(s) | 682, 1474, 1556, 2291, 2398, 3019, 3339, 3619 |
| BtsI | GCAGTG | 6 cut(s) | 132, 1705, 1971, 2995, 3049, 3250 |
| BveI | ACCTGC | 2 cut(s) | 2335, 3763 |
| Cac8I | GCNNGC | 7 cut(s) | 69, 390, 897, 1228, 2536, 3250, 3553 |
| CaiI | CAGNNNCTG | 2 cut(s) | 826, 3269 |
| CfoI | GCGC | 6 cut(s) | 377, 519, 1238, 1310, 2404, 2788 |
| Cfr13I | GGNCC | 4 cut(s) | 567, 1135, 3589, 3881 |
| ClaI | ATCGAT | 1 cut(s) | 1146 |
| CseI | GACGC | 4 cut(s) | 527, 1282, 2302, 3279 |
| Csp6I | GTAC | 7 cut(s) | 648, 681, 1647, 2166, 3132, 3360, 3393 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 539, 574, 3786, 3821 |
| CviQI | GTAC | 7 cut(s) | 648, 681, 1647, 2166, 3132, 3360, 3393 |
| DinI | GGCGCC | 2 cut(s) | 1237, 1309 |
| DraI | TTTAAA | 1 cut(s) | 3309 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3080 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3080 |
| EaeI | YGGCCR | 2 cut(s) | 780, 2218 |
| Eam1104I | CTCTTC | 9 cut(s) | 837, 855, 861, 897, 966, 1014, 1019, 1122, 3526 |
| EarI | CTCTTC | 9 cut(s) | 837, 855, 861, 897, 966, 1014, 1019, 1122, 3526 |
| EciI | GGCGGA | 1 cut(s) | 1875 |
| Ecl136II | GAGCTC | 3 cut(s) | 976, 1221, 1462 |
| Eco130I | CCWWGG | 3 cut(s) | 8, 672, 3706 |
| Eco147I | AGGCCT | 1 cut(s) | 13 |
| Eco24I | GRGCYC | 3 cut(s) | 978, 1223, 1464 |
| Eco32I | GATATC | 1 cut(s) | 1144 |
| Eco47I | GGWCC | 3 cut(s) | 1135, 3589, 3881 |
| Eco53kI | GAGCTC | 3 cut(s) | 976, 1221, 1462 |
| Eco57I | CTGAAG | 5 cut(s) | 861, 921, 1038, 1146, 3162 |
| Eco81I | CCTNAGG | 1 cut(s) | 831 |
| Eco88I | CYCGRG | 1 cut(s) | 370 |
| EcoICRI | GAGCTC | 3 cut(s) | 976, 1221, 1462 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3589 |
| EcoRII | CCWGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| EcoRV | GATATC | 1 cut(s) | 1144 |
| EcoT14I | CCWWGG | 3 cut(s) | 8, 672, 3706 |
| EcoT22I | ATGCAT | 2 cut(s) | 966, 3349 |
| EcoT38I | GRGCYC | 3 cut(s) | 978, 1223, 1464 |
| EgeI | GGCGCC | 2 cut(s) | 1237, 1309 |
| EheI | GGCGCC | 2 cut(s) | 1237, 1309 |
| ErhI | CCWWGG | 3 cut(s) | 8, 672, 3706 |
| Esp3I | CGTCTC | 1 cut(s) | 1919 |
| FaqI | GGGAC | 3 cut(s) | 1042, 1280, 3921 |
| FauI | CCCGC | 1 cut(s) | 2397 |
| FauNDI | CATATG | 4 cut(s) | 2627, 2815, 3067, 3286 |
| FblI | GTMKAC | 1 cut(s) | 2098 |
| FokI | GGATG | 8 cut(s) | 689, 1481, 1543, 2298, 2405, 3026, 3346, 3606 |
| FriOI | GRGCYC | 3 cut(s) | 978, 1223, 1464 |
| FspI | TGCGCA | 1 cut(s) | 2787 |
| GlaI | GCGC | 6 cut(s) | 376, 518, 1237, 1309, 2403, 2787 |
| GsaI | CCCAGC | 2 cut(s) | 1483, 1487 |
| GsuI | CTGGAG | 1 cut(s) | 4001 |
| HaeII | RGCGCY | 2 cut(s) | 1239, 1311 |
| HaeIII | GGCC | 8 cut(s) | 13, 568, 671, 782, 1214, 2137, 2220, 2844 |
| HapII | CCGG | 1 cut(s) | 2500 |
| HgaI | GACGC | 4 cut(s) | 527, 1282, 2302, 3279 |
| HhaI | GCGC | 6 cut(s) | 377, 519, 1238, 1310, 2404, 2788 |
| Hin1I | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| Hin6I | GCGC | 6 cut(s) | 375, 517, 1236, 1308, 2402, 2786 |
| HinP1I | GCGC | 6 cut(s) | 375, 517, 1236, 1308, 2402, 2786 |
| HincII | GTYRAC | 6 cut(s) | 328, 1014, 1656, 1782, 1974, 3196 |
| HindII | GTYRAC | 6 cut(s) | 328, 1014, 1656, 1782, 1974, 3196 |
| HindIII | AAGCTT | 3 cut(s) | 332, 1031, 1626 |
| HpaI | GTTAAC | 1 cut(s) | 1974 |
| HpaII | CCGG | 1 cut(s) | 2500 |
| HphI | GGTGA | 7 cut(s) | 70, 178, 1951, 2390, 2780, 2942, 3728 |
| Hpy99I | CGWCG | 5 cut(s) | 59, 200, 203, 2334, 2415 |
| HpyAV | CCTTC | 5 cut(s) | 24, 415, 587, 1186, 2521 |
| HpyCH4III | ACNGT | 8 cut(s) | 1056, 1315, 1653, 1800, 1901, 1945, 2669, 3193 |
| HpyCH4IV | ACGT | 4 cut(s) | 696, 1746, 3366, 3735 |
| HpySE526I | ACGT | 4 cut(s) | 696, 1746, 3366, 3735 |
| Hsp92I | GRCGYC | 3 cut(s) | 1236, 1308, 2313 |
| HspAI | GCGC | 6 cut(s) | 375, 517, 1236, 1308, 2402, 2786 |
| KasI | GGCGCC | 2 cut(s) | 1235, 1307 |
| KspAI | GTTAAC | 1 cut(s) | 1974 |
| LguI | GCTCTTC | 1 cut(s) | 966 |
| MaeII | ACGT | 4 cut(s) | 696, 1746, 3366, 3735 |
| MfeI | CAATTG | 3 cut(s) | 228, 1992, 2201 |
| MflI | RGATCY | 9 cut(s) | 705, 1066, 1513, 1927, 1951, 2056, 2807, 3403, 3833 |
| MhlI | GDGCHC | 6 cut(s) | 256, 978, 1223, 1464, 2507, 2557 |
| MlsI | TGGCCA | 1 cut(s) | 782 |
| MluNI | TGGCCA | 1 cut(s) | 782 |
| Mly113I | GGCGCC | 2 cut(s) | 1236, 1308 |
| MlyI | GAGTC | 2 cut(s) | 296, 3170 |
| MmeI | TCCRAC | 8 cut(s) | 67, 78, 1362, 2033, 2628, 2874, 3615, 3910 |
| Mox20I | TGGCCA | 1 cut(s) | 782 |
| Mph1103I | ATGCAT | 2 cut(s) | 966, 3349 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1390, 3723, 4027 |
| MscI | TGGCCA | 1 cut(s) | 782 |
| MslI | CAYNNNNRTG | 7 cut(s) | 249, 2070, 2690, 2928, 3054, 3332, 3537 |
| Msp20I | TGGCCA | 1 cut(s) | 782 |
| MspA1I | CMGCKG | 3 cut(s) | 416, 488, 1483 |
| MspCI | CTTAAG | 1 cut(s) | 934 |
| MspI | CCGG | 1 cut(s) | 2500 |
| MspR9I | CCNGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| MunI | CAATTG | 3 cut(s) | 228, 1992, 2201 |
| Mva1269I | GAATGC | 2 cut(s) | 400, 507 |
| MvaI | CCWGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| MvnI | CGCG | 3 cut(s) | 303, 377, 2404 |
| NarI | GGCGCC | 2 cut(s) | 1236, 1308 |
| NdeI | CATATG | 4 cut(s) | 2627, 2815, 3067, 3286 |
| NheI | GCTAGC | 1 cut(s) | 3551 |
| NmeAIII | GCCGAG | 1 cut(s) | 310 |
| NmuCI | GTSAC | 5 cut(s) | 1738, 1939, 2990, 3173, 3336 |
| NsbI | TGCGCA | 1 cut(s) | 2787 |
| NsiI | ATGCAT | 2 cut(s) | 966, 3349 |
| NspI | RCATGY | 3 cut(s) | 440, 3252, 3512 |
| PaeI | GCATGC | 1 cut(s) | 3252 |
| PaeR7I | CTCGAG | 1 cut(s) | 370 |
| PceI | AGGCCT | 1 cut(s) | 13 |
| PciI | ACATGT | 1 cut(s) | 3508 |
| PciSI | GCTCTTC | 1 cut(s) | 966 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1918, 2583 |
| PctI | GAATGC | 2 cut(s) | 400, 507 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1390, 3723, 4027 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1304, 2819, 3464 |
| PleI | GAGTC | 2 cut(s) | 295, 3170 |
| PluTI | GGCGCC | 2 cut(s) | 1239, 1311 |
| PpsI | GAGTC | 2 cut(s) | 295, 3170 |
| PpuMI | RGGWCCY | 1 cut(s) | 3589 |
| PscI | ACATGT | 1 cut(s) | 3508 |
| PshBI | ATTAAT | 1 cut(s) | 2237 |
| PsiI | TTATAA | 1 cut(s) | 2975 |
| Psp124BI | GAGCTC | 3 cut(s) | 978, 1223, 1464 |
| Psp5II | RGGWCCY | 1 cut(s) | 3589 |
| Psp6I | CCWGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| PspFI | CCCAGC | 2 cut(s) | 1479, 1483 |
| PspGI | CCWGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| PspPI | GGNCC | 4 cut(s) | 567, 1135, 3589, 3881 |
| PspPPI | RGGWCCY | 1 cut(s) | 3589 |
| PspXI | VCTCGAGB | 1 cut(s) | 370 |
| PstI | CTGCAG | 6 cut(s) | 139, 822, 1700, 1966, 3265, 3760 |
| PstNI | CAGNNNCTG | 2 cut(s) | 826, 3269 |
| PsuI | RGATCY | 9 cut(s) | 705, 1066, 1513, 1927, 1951, 2056, 2807, 3403, 3833 |
| PvuII | CAGCTG | 3 cut(s) | 416, 488, 1483 |
| RsaI | GTAC | 7 cut(s) | 649, 682, 1648, 2167, 3133, 3361, 3394 |
| RsaNI | GTAC | 7 cut(s) | 648, 681, 1647, 2166, 3132, 3360, 3393 |
| RseI | CAYNNNNRTG | 7 cut(s) | 249, 2070, 2690, 2928, 3054, 3332, 3537 |
| SacI | GAGCTC | 3 cut(s) | 978, 1223, 1464 |
| SapI | GCTCTTC | 1 cut(s) | 966 |
| Sau96I | GGNCC | 4 cut(s) | 567, 1135, 3589, 3881 |
| SchI | GAGTC | 2 cut(s) | 296, 3170 |
| ScrFI | CCNGG | 4 cut(s) | 1107, 2193, 3270, 3375 |
| SduI | GDGCHC | 6 cut(s) | 256, 978, 1223, 1464, 2507, 2557 |
| SfcI | CTRYAG | 7 cut(s) | 135, 582, 818, 1696, 1962, 3261, 3756 |
| SfoI | GGCGCC | 2 cut(s) | 1237, 1309 |
| Sfr274I | CTCGAG | 1 cut(s) | 370 |
| SinI | GGWCC | 3 cut(s) | 1135, 3589, 3881 |
| SlaI | CTCGAG | 1 cut(s) | 370 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 249, 2070, 2690, 2928, 3054, 3332, 3537 |
| SmlI | CTYRAG | 6 cut(s) | 62, 335, 370, 934, 1463, 2633 |
| SmoI | CTYRAG | 6 cut(s) | 62, 335, 370, 934, 1463, 2633 |
| SpeI | ACTAGT | 1 cut(s) | 3683 |
| SphI | GCATGC | 1 cut(s) | 3252 |
| SseBI | AGGCCT | 1 cut(s) | 13 |
| SsiI | CCGC | 9 cut(s) | 26, 72, 301, 492, 721, 1886, 2404, 3063, 3504 |
| SspDI | GGCGCC | 2 cut(s) | 1235, 1307 |
| SspI | AATATT | 1 cut(s) | 1987 |
| SstI | GAGCTC | 3 cut(s) | 978, 1223, 1464 |
| StuI | AGGCCT | 1 cut(s) | 13 |
| StyD4I | CCNGG | 4 cut(s) | 1105, 2191, 3268, 3373 |
| StyI | CCWWGG | 3 cut(s) | 8, 672, 3706 |
| TaaI | ACNGT | 8 cut(s) | 1056, 1315, 1653, 1800, 1901, 1945, 2669, 3193 |
| TaiI | ACGT | 4 cut(s) | 699, 1749, 3369, 3738 |
| TatI | WGTACW | 2 cut(s) | 647, 1646 |
| TauI | GCSGC | 2 cut(s) | 74, 494 |
| TseFI | GTSAC | 5 cut(s) | 1738, 1939, 2990, 3173, 3336 |
| Tsp45I | GTSAC | 5 cut(s) | 1738, 1939, 2990, 3173, 3336 |
| TspGWI | ACGGA | 4 cut(s) | 184, 1673, 2479, 3833 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1304, 2819, 3464 |
| Vha464I | CTTAAG | 1 cut(s) | 934 |
| VpaK11BI | GGWCC | 3 cut(s) | 1135, 3589, 3881 |
| VspI | ATTAAT | 1 cut(s) | 2237 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| XapI | RAATTY | 8 cut(s) | 162, 312, 800, 1729, 2029, 2243, 2700, 2948 |
| XbaI | TCTAGA | 3 cut(s) | 256, 1712, 3493 |
| XceI | RCATGY | 3 cut(s) | 440, 3252, 3512 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 790, 2745, 3544 |
| XhoI | CTCGAG | 1 cut(s) | 370 |
| XmiI | GTMKAC | 1 cut(s) | 2098 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1390, 3723, 4027 |
| Zsp2I | ATGCAT | 2 cut(s) | 966, 3349 |