pycom07g17140

MIZ/SP-RING zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000955
Physical Location & Seq
Reverse (-)
19689664 .. 19696739
7076 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g17140.10

Sequence Viewer

Length: 2331 bp
ATGTGGTGGCTGAGTGCAAGGTTTGACCTCCAGAGAAAATTGGCATCCTTTCGAGTCACAGACCTTAAGAATGTTCTGACTGAGCTGGGTACGTCAAAGCAAGGGCGGAAACAGGATCTGATTGATAGAATCTTAGCAGAAGTTTCAGATCAACAAAGGTTCTTAGCAGCATCCAATGCACTCCATCCACCGAAGAAAAAATTCACTGAGAAGAAAGGAATAGCAGAACTGATTGATGAAGCTTACAGAAAATTGCCGAATGCACCGTCAGTTGATTCTGCTTCAAAGGAACAGAGTGGTTCAGACACCTGCAGTGTAAAACCTAAAAAGGAAGTTAAAATTTTTAATGATCCAGATGTGAAGATTCGCTGCCCCTGTGGAAGTGCATTGCCTGCTGGGTCGACGATACAGTGTGTGGACCCAAGTTGTCAAGTGCAGCAACATATTGGTTGTGTTATTATCCCAGAGAAAACAGGGGATTGCAATGTACCAGTTCGGCCTCTTTTCTACTGTGAATTGTGTCGTCTCAAACGAGCAGATCCTTTTTGGGTGACTCTGGTAGATCTACTATCTCCGGTGAAACTAGTTACTTCAAATATTCCAATAGATGGTACAAATCCTACTCAGAGAGTAGAGAAGACATTTCTACTTTCTAGAGCCAATAGTGATATACTAAAGGATAATGAATATGATGTTCAGGCTTGGTGTGTACTTCTTAATGATAGTGTTTCATTTAGGATGCAATGGCCACAGTATGCAGATTTACAGGTCAATGGTATTAATGTTAGGACAGTTAATAGATCTGCACATCAATTGTTAGGTGCCAATGGTCGTGATGATGGAGCGTTAATCAAATTATGCATTTGGGAGGGAATCAATAAGATTTCACTATCAGCTTGTGATAATCGTGCTTTCTGTTTTGGTGTCAGACTTGTACAGCGACGAACAGTTCAGCAGGTTCGCAACTTGATTCCTAAAGAAGAAGATGGTGAGCTTTTTGAAGATGCACTAGCACGAGTTCGTCGTTGCATTGGCGGTGGGCCTGCTGTTGCAGCTGAAGATTGTGATAGTGACCTGGAAGTAATTTCAGACTCAATATCAGTAAATCTCCGCTGCCCTATGAGTGGTAGTCGAATGAAGGTAGCTGGCAGATTCAAACCTTGTGCCCACATGGGTTGCTTTGATCTTGAAACTTTTGTGGAGCTAAACCAACGCTCTAGGAAGTGGCAATGTCCTGTATGCCTGAAGAACTACTCTGTAGAGGATGTCATCATTGACCGTTATTTCAATCGCATTACAGCTATGATGCGAAATTGTGGAGAAGACATAACAGAGATCAACGTAAAGCCAGATGGTTCTTGGAGTGCAAAGACCAAAGGCGAGTTTGGTGATCTTGCGCAGTGGCATTTGCCAGATGGATCTCCATGCGGTGATAGTCATTTAGAACCCTCGAGGAAGTTGAAGCTGGAATCTGGTTTAAACGAAGATCATAGAGTTATGTATAATGGGGTTACTGAAGTTCGTGGGCATCAGCATGGCCCATTAGAGAAAGTATATGAGGGCTGCAGTCACAATGTAATAACAATGAGCAGCAGTGACTGCAGCGGGCACATGGATTTCTCTGTAAATGAGGACAATGAAATCAATTCTGTACCATATAATTCTGATCCAACGTTTTCAAATATGATTGGTGATTCTGCTGAAGCTAGGAATACTGACATCATCATTCTTAGTGACTCCGAAGAAGAAGATGCCAACTTTGTTTCTTCTGGAACCCCGTACAATCCATTGCCAGTAAGTGGAACAGATTCTGGGTTCCAATTCTTCGGTAATGTCTCTGGTTCTTTCATTGATAACACATTGGTTCCAGAGGATCTAAATTCGAGCACCCAAGTTATGAACTCTTCTATGTTCCATGCCGATGCTGGATTGGACTTGATTGAAAACACCTTGCCCCTTGCTAGTGAGGACCCCTCACTGCAAAATTTTCTTCCAACTCAGCCCTCGCCTTTGTTGGAACAGTCCGATTCTGGACATCCTCCTCCAGAATCAAACGGCATTAGTGGGGACGACTGGATCTCTCTTCGACTTGGCAGGGTCAATGAAAGTGTTCCCAATTCCTGCGCTGGACATGCATCCACAAATGAAGTACAACTGAGTAATGAATGTGAATCAGATGAAGCTACTCCTTTAATTAAGGATAGAACTGATGAGGTTAGGTCTAACAAAGTAAAGTCACGGAGATTTTCAGATGGACCCTTCTCCTTTCCTCGTCAGCCGAGGACTTTGAGACAACGAGTTTATCTACCAGTAGAATCCAACTCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 ko04630 ko05160 map04120 map04630 map05160
Pfam Domains
Protein Families
SAP zf-MIZ

Protein Analysis

777

Amino Acids

86.11

Weight (kDa)

5.18

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000955)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970 FvH4_7g19970
malus_domestica MD01G1111200.v1.1 MD07G1177400.v1.1
prunus_persica Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1 Prupe.2G216700_v2.0.a1
pyrus_communis pycom01g13860 pycom07g17140
rosa_chinensis RchiOBHm_Chr1g0363931
rosa_laevigata RLG00000027534
rosa_multiflora Rmu_sc0001607.1_g000006
rosa_roxburghii Rroxscaffold_4G00292830
rosa_rugosa Rorug01G0311200 Rorug01G0311300
rosa_samantha Rh1AG319200 Rh1BG282200 Rh1CG298700 Rh1DG313600
rosa_wichuraiana Rw1G028290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 317
AbsI CCTCGAGG 1 cut(s) 1450
Acc16I TGCGCA 1 cut(s) 1398
Acc36I ACCTGC 2 cut(s) 317, 946
AccB1I GGYRCC 1 cut(s) 821
AccB7I CCANNNNNTGG 2 cut(s) 608, 1799
AccI GTMKAC 1 cut(s) 401
AciI CCGC 5 cut(s) 106, 1035, 1111, 1428, 1605
AclI AACGTT 1 cut(s) 1673
AclWI GGATC 7 cut(s) 123, 344, 533, 1426, 1661, 1881, 2084
AcoI YGGCCR 1 cut(s) 746
AcsI RAATTY 4 cut(s) 200, 339, 1879, 1984
AcuI CTGAAG 4 cut(s) 1077, 1265, 1536, 1722
AfaI GTAC 8 cut(s) 91, 489, 613, 711, 936, 1653, 1781, 2151
AfiI CCNNNNNNNGG 3 cut(s) 608, 1124, 1799
AflII CTTAAG 1 cut(s) 65
AgsI TTSAA 9 cut(s) 285, 594, 1001, 1156, 1190, 1288, 1462, 1680, 1943
AhlI ACTAGT 1 cut(s) 583
AjnI CCWGG 1 cut(s) 1074
Alw21I GWGCWC 1 cut(s) 1889
Alw26I GTCTC 3 cut(s) 530, 1840, 2284
AlwI GGATC 7 cut(s) 123, 344, 533, 1426, 1661, 1881, 2084
AlwNI CAGNNNCTG 3 cut(s) 118, 1599, 1811
Ama87I CYCGRG 1 cut(s) 1450
AoxI GGCC 4 cut(s) 497, 746, 1040, 1537
ApeKI GCWGC 8 cut(s) 167, 369, 436, 1052, 1113, 1563, 1590, 1602
ApoI RAATTY 4 cut(s) 200, 339, 1879, 1984
ArsI GACNNNNNNTTYG 2 cut(s) 251, 283
AseI ATTAAT 1 cut(s) 780
Asp700I GAANNNNTTC 3 cut(s) 200, 1807, 2109
AspLEI GCGC 2 cut(s) 1399, 2126
AspS9I GGNCC 5 cut(s) 418, 1040, 1538, 1969, 2255
AsuHPI GGTGA 6 cut(s) 562, 589, 1001, 1400, 1442, 1703
AvaI CYCGRG 1 cut(s) 1450
AvaII GGWCC 3 cut(s) 418, 1969, 2255
BaeGI GKGCMC 2 cut(s) 1168, 1611
BalI TGGCCA 1 cut(s) 748
BanI GGYRCC 1 cut(s) 821
BauI CACGAG 1 cut(s) 1014
BbsI GAAGAC 2 cut(s) 644, 1329
Bbv12I GWGCWC 1 cut(s) 1889
BbvI GCAGC 8 cut(s) 179, 356, 448, 1064, 1100, 1550, 1602, 1614
BccI CCATC 7 cut(s) 192, 602, 833, 980, 1346, 1409, 2246
BceAI ACGGC 1 cut(s) 2071
BciT130I CCWGG 1 cut(s) 1076
BcoDI GTCTC 3 cut(s) 530, 1840, 2284
BcuI ACTAGT 1 cut(s) 583
BfaI CTAG 6 cut(s) 584, 654, 1010, 1218, 1707, 1962
BfmI CTRYAG 4 cut(s) 310, 1257, 1564, 1600
BfrI CTTAAG 1 cut(s) 65
BfuAI ACCTGC 2 cut(s) 317, 946
BglII AGATCT 2 cut(s) 562, 800
BisI GCNGC 8 cut(s) 168, 370, 437, 1053, 1114, 1564, 1591, 1603
BlsI GCNGC 8 cut(s) 169, 371, 438, 1054, 1115, 1565, 1592, 1604
Bme1390I CCNGG 1 cut(s) 1076
Bme18I GGWCC 3 cut(s) 418, 1969, 2255
BmeT110I CYCGRG 1 cut(s) 1450
BmgT120I GGNCC 5 cut(s) 418, 1040, 1538, 1969, 2255
BmiI GGNNCC 7 cut(s) 420, 823, 1774, 1817, 1866, 1971, 2257
BmrFI CCNGG 1 cut(s) 1076
BmsI GCATC 9 cut(s) 53, 179, 729, 994, 1296, 1537, 1741, 1912, 2144
BpiI GAAGAC 2 cut(s) 644, 1329
BplI GAGNNNNNCTC 2 cut(s) 1958, 1990
BpmI CTGGAG 2 cut(s) 14, 2028
BsaJI CCNNGG 1 cut(s) 2279
BsaWI WCCGGW 1 cut(s) 574
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1124, 1799
Bse1I ACTGG 4 cut(s) 491, 1793, 2078, 2309
Bse3DI GCAATG 5 cut(s) 386, 490, 749, 1235, 1787
BseBI CCWGG 1 cut(s) 1076
BseDI CCNNGG 1 cut(s) 2279
BseGI GGATG 7 cut(s) 44, 170, 184, 744, 1270, 2035, 2135
BseLI CCNNNNNNNGG 3 cut(s) 608, 1124, 1799
BseMI GCAATG 5 cut(s) 386, 490, 749, 1235, 1787
BseMII CTCAG 5 cut(s) 72, 198, 638, 2012, 2147
BseNI ACTGG 4 cut(s) 491, 1793, 2078, 2309
BseRI GAGGAG 1 cut(s) 2031
BseSI GKGCMC 2 cut(s) 1168, 1611
BseXI GCAGC 8 cut(s) 179, 356, 448, 1064, 1100, 1550, 1602, 1614
BseYI CCCAGC 2 cut(s) 85, 395
BsgI GTGCAG 2 cut(s) 455, 789
BshFI GGCC 4 cut(s) 499, 748, 1042, 1539
BshNI GGYRCC 1 cut(s) 821
BsiHKAI GWGCWC 1 cut(s) 1889
BsiHKCI CYCGRG 1 cut(s) 1450
BsiSI CCGG 1 cut(s) 575
BslFI GGGAC 1 cut(s) 2081
BslI CCNNNNNNNGG 3 cut(s) 608, 1124, 1799
BsmAI GTCTC 3 cut(s) 530, 1840, 2284
BsmBI CGTCTC 1 cut(s) 530
BsmFI GGGAC 1 cut(s) 2081
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 4 cut(s) 499, 748, 1042, 1539
BsoBI CYCGRG 1 cut(s) 1450
Bsp1286I GDGCHC 3 cut(s) 1168, 1611, 1889
Bsp1407I TGTACA 1 cut(s) 934
BspACI CCGC 5 cut(s) 106, 1035, 1111, 1428, 1605
BspANI GGCC 4 cut(s) 499, 748, 1042, 1539
BspCNI CTCAG 5 cut(s) 73, 199, 637, 2011, 2148
BspLI GGNNCC 7 cut(s) 420, 823, 1774, 1817, 1866, 1971, 2257
BspMAI CTGCAG 3 cut(s) 314, 1568, 1604
BspMI ACCTGC 2 cut(s) 317, 946
BspPI GGATC 7 cut(s) 123, 344, 533, 1426, 1661, 1881, 2084
BspT107I GGYRCC 1 cut(s) 821
BspTI CTTAAG 1 cut(s) 65
BsrDI GCAATG 5 cut(s) 386, 490, 749, 1235, 1787
BsrGI TGTACA 1 cut(s) 934
BsrI ACTGG 4 cut(s) 491, 1793, 2078, 2309
BssECI CCNNGG 1 cut(s) 2279
BssSI CACGAG 1 cut(s) 1014
Bst2BI CACGAG 1 cut(s) 1014
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 8 cut(s) 267, 411, 512, 753, 793, 949, 1280, 2022
Bst6I CTCTTC 2 cut(s) 1909, 2088
BstAFI CTTAAG 1 cut(s) 65
BstAPI GCANNNNNTGC 3 cut(s) 176, 392, 1599
BstAUI TGTACA 1 cut(s) 934
BstC8I GCNNGC 4 cut(s) 393, 1044, 1147, 1607
BstDEI CTNAG 9 cut(s) 11, 81, 133, 163, 207, 624, 1730, 1998, 2156
BstF5I GGATG 7 cut(s) 44, 170, 184, 744, 1270, 2035, 2135
BstHHI GCGC 2 cut(s) 1399, 2126
BstMAI GTCTC 3 cut(s) 530, 1840, 2284
BstMWI GCNNNNNNNGC 5 cut(s) 176, 392, 1052, 1599, 2132
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 1 cut(s) 2135
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 4 cut(s) 310, 1257, 1564, 1600
BstSLI GKGCMC 2 cut(s) 1168, 1611
BstV1I GCAGC 8 cut(s) 179, 356, 448, 1064, 1100, 1550, 1602, 1614
BstV2I GAAGAC 2 cut(s) 644, 1329
BstX2I RGATCY 7 cut(s) 115, 538, 562, 800, 1418, 1873, 2076
BstYI RGATCY 7 cut(s) 115, 538, 562, 800, 1418, 1873, 2076
BsuRI GGCC 4 cut(s) 499, 748, 1042, 1539
BtsCI GGATG 7 cut(s) 44, 170, 184, 744, 1270, 2035, 2135
BtsI GCAGTG 4 cut(s) 319, 1406, 1600, 1976
BtsIMutI CAGTG 6 cut(s) 204, 319, 416, 1406, 1600, 1976
BveI ACCTGC 2 cut(s) 317, 946
Cac8I GCNNGC 4 cut(s) 393, 1044, 1147, 1607
CaiI CAGNNNCTG 3 cut(s) 118, 1599, 1811
CfoI GCGC 2 cut(s) 1399, 2126
Cfr13I GGNCC 5 cut(s) 418, 1040, 1538, 1969, 2255
Csp6I GTAC 8 cut(s) 90, 488, 612, 710, 935, 1652, 1780, 2150
CspCI CAANNNNNGTGG 2 cut(s) 1157, 1192
CviAII CATG 6 cut(s) 1171, 1425, 1535, 1612, 1916, 2132
CviQI GTAC 8 cut(s) 90, 488, 612, 710, 935, 1652, 1780, 2150
DdeI CTNAG 9 cut(s) 11, 81, 133, 163, 207, 624, 1730, 1998, 2156
DraI TTTAAA 1 cut(s) 1479
EaeI YGGCCR 1 cut(s) 746
Eam1104I CTCTTC 2 cut(s) 1909, 2088
EarI CTCTTC 2 cut(s) 1909, 2088
EciI GGCGGA 1 cut(s) 121
Eco47I GGWCC 3 cut(s) 418, 1969, 2255
Eco57I CTGAAG 4 cut(s) 1077, 1265, 1536, 1722
Eco88I CYCGRG 1 cut(s) 1450
EcoO109I RGGNCCY 1 cut(s) 1969
EcoRII CCWGG 1 cut(s) 1074
EcoT22I ATGCAT 2 cut(s) 863, 2137
Esp3I CGTCTC 1 cut(s) 530
FaeI CATG 6 cut(s) 1174, 1428, 1538, 1615, 1919, 2135
FaqI GGGAC 1 cut(s) 2081
FatI CATG 6 cut(s) 1170, 1424, 1534, 1611, 1915, 2131
FauI CCCGC 1 cut(s) 1598
FblI GTMKAC 1 cut(s) 401
Fnu4HI GCNGC 8 cut(s) 168, 370, 437, 1053, 1114, 1564, 1591, 1603
FokI GGATG 7 cut(s) 31, 157, 171, 751, 1277, 2022, 2122
Fsp4HI GCNGC 8 cut(s) 168, 370, 437, 1053, 1114, 1564, 1591, 1603
FspBI CTAG 6 cut(s) 584, 654, 1010, 1218, 1707, 1962
FspI TGCGCA 1 cut(s) 1398
GlaI GCGC 2 cut(s) 1398, 2125
GluI GCNGC 8 cut(s) 168, 370, 437, 1053, 1114, 1564, 1591, 1603
GsaI CCCAGC 2 cut(s) 89, 399
GsuI CTGGAG 2 cut(s) 14, 2028
HaeIII GGCC 4 cut(s) 499, 748, 1042, 1539
HapII CCGG 1 cut(s) 575
HhaI GCGC 2 cut(s) 1399, 2126
Hin1II CATG 6 cut(s) 1174, 1428, 1538, 1615, 1919, 2135
Hin6I GCGC 2 cut(s) 1397, 2124
HinP1I GCGC 2 cut(s) 1397, 2124
HincII GTYRAC 1 cut(s) 402
HindII GTYRAC 1 cut(s) 402
HindIII AAGCTT 1 cut(s) 240
HpaII CCGG 1 cut(s) 575
HphI GGTGA 6 cut(s) 562, 589, 1001, 1400, 1442, 1703
Hpy166II GTNNAC 3 cut(s) 402, 418, 710
Hpy188III TCNNGA 9 cut(s) 31, 353, 654, 833, 1187, 1770, 1868, 2031, 2045
Hpy8I GTNNAC 3 cut(s) 402, 418, 710
Hpy99I CGWCG 3 cut(s) 406, 945, 1026
HpyAV CCTTC 2 cut(s) 1132, 2269
HpyCH4III ACNGT 8 cut(s) 267, 411, 512, 753, 793, 949, 1280, 2022
HpyCH4IV ACGT 3 cut(s) 92, 1341, 1673
HpyF10VI GCNNNNNNNGC 5 cut(s) 176, 392, 1052, 1599, 2132
HpyF3I CTNAG 9 cut(s) 11, 81, 133, 163, 207, 624, 1730, 1998, 2156
HpySE526I ACGT 3 cut(s) 92, 1341, 1673
Hsp92II CATG 6 cut(s) 1174, 1428, 1538, 1615, 1919, 2135
HspAI GCGC 2 cut(s) 1397, 2124
LmnI GCTCC 2 cut(s) 842, 1201
Lsp1109I GCAGC 8 cut(s) 179, 356, 448, 1064, 1100, 1550, 1602, 1614
LweI GCATC 9 cut(s) 53, 179, 729, 994, 1296, 1537, 1741, 1912, 2144
MaeI CTAG 6 cut(s) 584, 654, 1010, 1218, 1707, 1962
MaeII ACGT 3 cut(s) 92, 1341, 1673
MaeIII GTNAC 9 cut(s) 55, 550, 586, 1070, 1510, 1568, 1595, 1733, 2235
MfeI CAATTG 1 cut(s) 812
MflI RGATCY 7 cut(s) 115, 538, 562, 800, 1418, 1873, 2076
MhlI GDGCHC 3 cut(s) 1168, 1611, 1889
MlsI TGGCCA 1 cut(s) 748
MluNI TGGCCA 1 cut(s) 748
MlyI GAGTC 4 cut(s) 63, 547, 1085, 1730
MmeI TCCRAC 3 cut(s) 1694, 1995, 2018
Mox20I TGGCCA 1 cut(s) 748
Mph1103I ATGCAT 2 cut(s) 863, 2137
MroXI GAANNNNTTC 3 cut(s) 200, 1807, 2109
MscI TGGCCA 1 cut(s) 748
MslI CAYNNNNRTG 2 cut(s) 1533, 1920
Msp20I TGGCCA 1 cut(s) 748
MspA1I CMGCKG 3 cut(s) 1055, 1113, 1605
MspCI CTTAAG 1 cut(s) 65
MspI CCGG 1 cut(s) 575
MspR9I CCNGG 1 cut(s) 1076
MssI GTTTAAAC 1 cut(s) 1479
MunI CAATTG 1 cut(s) 812
Mva1269I GAATGC 1 cut(s) 265
MvaI CCWGG 1 cut(s) 1076
MwoI GCNNNNNNNGC 5 cut(s) 176, 392, 1052, 1599, 2132
NlaIII CATG 6 cut(s) 1174, 1428, 1538, 1615, 1919, 2135
NlaIV GGNNCC 7 cut(s) 420, 823, 1774, 1817, 1866, 1971, 2257
NmeAIII GCCGAG 1 cut(s) 2304
NmuCI GTSAC 7 cut(s) 55, 550, 1070, 1568, 1595, 1733, 2235
NsbI TGCGCA 1 cut(s) 1398
NsiI ATGCAT 2 cut(s) 863, 2137
NspI RCATGY 1 cut(s) 2135
PacI TTAATTAA 1 cut(s) 2196
PaeR7I CTCGAG 1 cut(s) 1450
PaqCI CACCTGC 1 cut(s) 317
PcsI WCGNNNNNNNCGW 2 cut(s) 529, 1021
PctI GAATGC 1 cut(s) 265
PdmI GAANNNNTTC 3 cut(s) 200, 1807, 2109
PflMI CCANNNNNTGG 2 cut(s) 608, 1799
PkrI GCNGC 8 cut(s) 169, 371, 438, 1054, 1115, 1565, 1592, 1604
PleI GAGTC 4 cut(s) 62, 547, 1085, 1730
PmeI GTTTAAAC 1 cut(s) 1479
PpsI GAGTC 4 cut(s) 62, 547, 1085, 1730
PpuMI RGGWCCY 1 cut(s) 1969
PshBI ATTAAT 1 cut(s) 780
Psp1406I AACGTT 1 cut(s) 1673
Psp5II RGGWCCY 1 cut(s) 1969
Psp6I CCWGG 1 cut(s) 1074
PspFI CCCAGC 2 cut(s) 85, 395
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 7 cut(s) 420, 823, 1774, 1817, 1866, 1971, 2257
PspPI GGNCC 5 cut(s) 418, 1040, 1538, 1969, 2255
PspPPI RGGWCCY 1 cut(s) 1969
PspXI VCTCGAGB 1 cut(s) 1450
PstI CTGCAG 3 cut(s) 314, 1568, 1604
PstNI CAGNNNCTG 3 cut(s) 118, 1599, 1811
PsuI RGATCY 7 cut(s) 115, 538, 562, 800, 1418, 1873, 2076
PvuII CAGCTG 1 cut(s) 1055
RsaI GTAC 8 cut(s) 91, 489, 613, 711, 936, 1653, 1781, 2151
RsaNI GTAC 8 cut(s) 90, 488, 612, 710, 935, 1652, 1780, 2150
RseI CAYNNNNRTG 2 cut(s) 1533, 1920
SalI GTCGAC 1 cut(s) 400
SatI GCNGC 8 cut(s) 168, 370, 437, 1053, 1114, 1564, 1591, 1603
Sau96I GGNCC 5 cut(s) 418, 1040, 1538, 1969, 2255
SchI GAGTC 4 cut(s) 63, 547, 1085, 1730
ScrFI CCNGG 1 cut(s) 1076
SduI GDGCHC 3 cut(s) 1168, 1611, 1889
SfaNI GCATC 9 cut(s) 53, 179, 729, 994, 1296, 1537, 1741, 1912, 2144
SfcI CTRYAG 4 cut(s) 310, 1257, 1564, 1600
Sfr274I CTCGAG 1 cut(s) 1450
SinI GGWCC 3 cut(s) 418, 1969, 2255
SlaI CTCGAG 1 cut(s) 1450
SmiMI CAYNNNNRTG 2 cut(s) 1533, 1920
SmlI CTYRAG 2 cut(s) 65, 1450
SmoI CTYRAG 2 cut(s) 65, 1450
SpeI ACTAGT 1 cut(s) 583
SsiI CCGC 5 cut(s) 106, 1035, 1111, 1428, 1605
SspI AATATT 1 cut(s) 598
SspMI CTAG 6 cut(s) 584, 654, 1010, 1218, 1707, 1962
StyD4I CCNGG 1 cut(s) 1074
TaaI ACNGT 8 cut(s) 267, 411, 512, 753, 793, 949, 1280, 2022
TaiI ACGT 3 cut(s) 95, 1344, 1676
TaqI TCGA 6 cut(s) 52, 401, 1132, 1451, 1883, 2086
TatI WGTACW 3 cut(s) 709, 934, 2149
TscAI CASTG 6 cut(s) 211, 319, 416, 1406, 1600, 1983
TseFI GTSAC 7 cut(s) 55, 550, 1070, 1568, 1595, 1733, 2235
TseI GCWGC 8 cut(s) 167, 369, 436, 1052, 1113, 1563, 1590, 1602
Tsp45I GTSAC 7 cut(s) 55, 550, 1070, 1568, 1595, 1733, 2235
TspGWI ACGGA 1 cut(s) 2254
TspRI CASTG 6 cut(s) 211, 319, 416, 1406, 1600, 1983
Van91I CCANNNNNTGG 2 cut(s) 608, 1799
Vha464I CTTAAG 1 cut(s) 65
VpaK11BI GGWCC 3 cut(s) 418, 1969, 2255
VspI ATTAAT 1 cut(s) 780
XapI RAATTY 4 cut(s) 200, 339, 1879, 1984
XbaI TCTAGA 1 cut(s) 653
XceI RCATGY 1 cut(s) 2135
XcmI CCANNNNNNNNNTGG 2 cut(s) 1356, 1922
XhoI CTCGAG 1 cut(s) 1450
XmiI GTMKAC 1 cut(s) 401
XmnI GAANNNNTTC 3 cut(s) 200, 1807, 2109
XspI CTAG 6 cut(s) 584, 654, 1010, 1218, 1707, 1962
Zsp2I ATGCAT 2 cut(s) 863, 2137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.