MD07G1231800.v1.1

ADP,ATP carrier protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0002256
Physical Location & Seq
Reverse (-)
30594098 .. 30595936
1839 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1231800.v1.1.491

Sequence Viewer

Length: 543 bp
ATGACGTTGTTAAACTGTTTATTTACTGTCATGAAATTCCAACAAATGTTTCCACAGATGTGTATGCTTTGTATCATACATCAATATTGGTATTTGGGTATAATCACTTCGTGTGTTTTATCACAGGGGCGTTTTCTAACTATAGTGGGGGTTACTACAGCTATATGCGCGGCTCCATTTGTTGCCTTCTTAAATTTGGTTGCTATTGCTGTCTGGCCAACTTGGGTAGCCATCGCAGTGTTTGAGACCTTGCGGAAGTTTGTTACTTATGTTCTGACCAGACCAGGTAGAGAACTCCTGTTTACTGTCGTCTCGCAGGATGAAAAATACAAAGCCAAGGTTTGCATCGATGTGTTTGTTCAACGACTAGGAGATGCTACAGCAGCAGGAATGTACAAGCTACTTTTCAGCACTCTTAACGGAAGAGCGCCAACCGTGTCTCTCTACGGCCTGCCTGTCTGTTTGCTATGGATAGTTATTGCGTTTCATTTAGGTCGCCGTCAAGCTGAACTCGCAAAACTCCGGACACATTCCACTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TLC

Protein Analysis

181

Amino Acids

20.27

Weight (kDa)

9.44

Isoelectric Point (pI)

29.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TLC PF03219 69 - 166 2.1e-06 TLC ATP/ADP transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 170
AccIII TCCGGA 1 cut(s) 522
AciI CCGC 2 cut(s) 170, 253
AcoI YGGCCR 1 cut(s) 215
AcsI RAATTY 2 cut(s) 35, 193
AdeI CACNNNGTG 1 cut(s) 111
AfaI GTAC 1 cut(s) 395
AgsI TTSAA 1 cut(s) 362
AjnI CCWGG 1 cut(s) 283
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AleI CACNNNNGTG 1 cut(s) 58
AluBI AGCT 3 cut(s) 161, 400, 506
AluI AGCT 3 cut(s) 161, 400, 506
Alw26I GTCTC 3 cut(s) 239, 316, 444
Aor13HI TCCGGA 1 cut(s) 522
AoxI GGCC 2 cut(s) 215, 448
ApeKI GCWGC 1 cut(s) 383
ApoI RAATTY 2 cut(s) 35, 193
AspLEI GCGC 2 cut(s) 170, 430
BalI TGGCCA 1 cut(s) 217
BarI GAAGNNNNNNTAC 2 cut(s) 91, 123
BbvI GCAGC 1 cut(s) 395
BccI CCATC 1 cut(s) 239
BceAI ACGGC 2 cut(s) 463, 483
BciT130I CCWGG 1 cut(s) 285
BcoDI GTCTC 3 cut(s) 239, 316, 444
BfaI CTAG 1 cut(s) 368
BfmI CTRYAG 3 cut(s) 141, 156, 378
BfoI RGCGCY 1 cut(s) 431
BisI GCNGC 2 cut(s) 171, 384
BlsI GCNGC 2 cut(s) 172, 385
Bme1390I CCNGG 1 cut(s) 285
BmiI GGNNCC 1 cut(s) 174
BmrFI CCNGG 1 cut(s) 285
BmsI GCATC 2 cut(s) 354, 364
Bsa29I ATCGAT 1 cut(s) 348
BsaI GGTCTC 1 cut(s) 239
BsaJI CCNNGG 1 cut(s) 336
BsaWI WCCGGW 1 cut(s) 522
BseAI TCCGGA 1 cut(s) 522
BseBI CCWGG 1 cut(s) 285
BseCI ATCGAT 1 cut(s) 348
BseDI CCNNGG 1 cut(s) 336
BseGI GGATG 1 cut(s) 325
BseXI GCAGC 1 cut(s) 395
Bsh1236I CGCG 1 cut(s) 170
BshFI GGCC 2 cut(s) 217, 450
BshVI ATCGAT 1 cut(s) 348
BsiSI CCGG 1 cut(s) 523
BsmAI GTCTC 3 cut(s) 239, 316, 444
BsmBI CGTCTC 1 cut(s) 316
BsnI GGCC 2 cut(s) 217, 450
Bso31I GGTCTC 1 cut(s) 239
Bsp13I TCCGGA 1 cut(s) 522
Bsp1407I TGTACA 1 cut(s) 393
BspACI CCGC 2 cut(s) 170, 253
BspANI GGCC 2 cut(s) 217, 450
BspDI ATCGAT 1 cut(s) 348
BspEI TCCGGA 1 cut(s) 522
BspFNI CGCG 1 cut(s) 170
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 1 cut(s) 174
BspQI GCTCTTC 1 cut(s) 418
BspTNI GGTCTC 1 cut(s) 239
BsrGI TGTACA 1 cut(s) 393
BssECI CCNNGG 1 cut(s) 336
BssT1I CCWWGG 1 cut(s) 336
Bst2UI CCWGG 1 cut(s) 285
Bst4CI ACNGT 4 cut(s) 17, 28, 307, 436
Bst6I CTCTTC 1 cut(s) 418
BstAUI TGTACA 1 cut(s) 393
BstC8I GCNNGC 1 cut(s) 452
BstF5I GGATG 1 cut(s) 325
BstFNI CGCG 1 cut(s) 170
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 2 cut(s) 170, 430
BstMAI GTCTC 3 cut(s) 239, 316, 444
BstMWI GCNNNNNNNGC 3 cut(s) 167, 383, 512
BstNI CCWGG 1 cut(s) 285
BstSCI CCNGG 1 cut(s) 283
BstSFI CTRYAG 3 cut(s) 141, 156, 378
BstUI CGCG 1 cut(s) 170
BstV1I GCAGC 1 cut(s) 395
Bsu15I ATCGAT 1 cut(s) 348
BsuRI GGCC 2 cut(s) 217, 450
BsuTUI ATCGAT 1 cut(s) 348
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 1 cut(s) 325
BtsI GCAGTG 1 cut(s) 243
BtsIMutI CAGTG 1 cut(s) 243
Cac8I GCNNGC 1 cut(s) 452
CciI TCATGA 1 cut(s) 30
CfoI GCGC 2 cut(s) 170, 430
ClaI ATCGAT 1 cut(s) 348
CsiI ACCWGGT 1 cut(s) 283
Csp6I GTAC 1 cut(s) 394
CviAII CATG 1 cut(s) 31
CviJI RGCY 8 cut(s) 161, 173, 217, 230, 335, 400, 450, 506
CviKI_1 RGCY 8 cut(s) 161, 173, 217, 230, 335, 400, 450, 506
CviQI GTAC 1 cut(s) 394
DraIII CACNNNGTG 1 cut(s) 111
EaeI YGGCCR 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 418
EarI CTCTTC 1 cut(s) 418
Eco130I CCWWGG 1 cut(s) 336
Eco31I GGTCTC 1 cut(s) 239
EcoRII CCWGG 1 cut(s) 283
EcoT14I CCWWGG 1 cut(s) 336
ErhI CCWWGG 1 cut(s) 336
Esp3I CGTCTC 1 cut(s) 316
FaeI CATG 1 cut(s) 34
FaiI YATR 9 cut(s) 32, 65, 77, 101, 143, 164, 166, 270, 469
FatI CATG 1 cut(s) 30
Fnu4HI GCNGC 2 cut(s) 171, 384
FokI GGATG 1 cut(s) 332
Fsp4HI GCNGC 2 cut(s) 171, 384
FspBI CTAG 1 cut(s) 368
GlaI GCGC 2 cut(s) 169, 429
GluI GCNGC 2 cut(s) 171, 384
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 2 cut(s) 217, 450
HapII CCGG 1 cut(s) 523
HhaI GCGC 2 cut(s) 170, 430
Hin1II CATG 1 cut(s) 34
Hin6I GCGC 2 cut(s) 168, 428
HinP1I GCGC 2 cut(s) 168, 428
HpaII CCGG 1 cut(s) 523
Hpy166II GTNNAC 1 cut(s) 303
Hpy188I TCNGA 1 cut(s) 276
Hpy188III TCNNGA 2 cut(s) 31, 523
Hpy8I GTNNAC 1 cut(s) 303
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 4 cut(s) 17, 28, 307, 436
HpyCH4IV ACGT 1 cut(s) 5
HpyCH4V TGCA 1 cut(s) 345
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 383, 512
HpySE526I ACGT 1 cut(s) 5
Hsp92II CATG 1 cut(s) 34
HspAI GCGC 2 cut(s) 168, 428
Kpn2I TCCGGA 1 cut(s) 522
LguI GCTCTTC 1 cut(s) 418
LmnI GCTCC 1 cut(s) 178
Lsp1109I GCAGC 1 cut(s) 395
LweI GCATC 2 cut(s) 354, 364
MabI ACCWGGT 1 cut(s) 283
MaeI CTAG 1 cut(s) 368
MaeII ACGT 1 cut(s) 5
MaeIII GTNAC 2 cut(s) 151, 262
MboII GAAGA 1 cut(s) 435
MlsI TGGCCA 1 cut(s) 217
MluCI AATT 2 cut(s) 35, 193
MluNI TGGCCA 1 cut(s) 217
MmeI TCCRAC 1 cut(s) 64
Mox20I TGGCCA 1 cut(s) 217
MroI TCCGGA 1 cut(s) 522
MscI TGGCCA 1 cut(s) 217
MseI TTAA 3 cut(s) 11, 191, 417
MslI CAYNNNNRTG 3 cut(s) 58, 236, 350
Msp20I TGGCCA 1 cut(s) 217
MspI CCGG 1 cut(s) 523
MspR9I CCNGG 1 cut(s) 285
MvaI CCWGG 1 cut(s) 285
MvnI CGCG 1 cut(s) 170
MwoI GCNNNNNNNGC 3 cut(s) 167, 383, 512
NlaIII CATG 1 cut(s) 34
NlaIV GGNNCC 1 cut(s) 174
OliI CACNNNNGTG 1 cut(s) 58
PagI TCATGA 1 cut(s) 30
PciSI GCTCTTC 1 cut(s) 418
PkrI GCNGC 2 cut(s) 172, 385
Psp6I CCWGG 1 cut(s) 283
PspGI CCWGG 1 cut(s) 283
PspN4I GGNNCC 1 cut(s) 174
RsaI GTAC 1 cut(s) 395
RsaNI GTAC 1 cut(s) 394
RseI CAYNNNNRTG 3 cut(s) 58, 236, 350
SapI GCTCTTC 1 cut(s) 418
SaqAI TTAA 3 cut(s) 11, 191, 417
SatI GCNGC 2 cut(s) 171, 384
ScrFI CCNGG 1 cut(s) 285
SetI ASST 8 cut(s) 8, 163, 251, 289, 342, 402, 496, 508
SexAI ACCWGGT 1 cut(s) 283
SfaNI GCATC 2 cut(s) 354, 364
SfcI CTRYAG 3 cut(s) 141, 156, 378
SmiMI CAYNNNNRTG 3 cut(s) 58, 236, 350
Sse9I AATT 2 cut(s) 35, 193
SsiI CCGC 2 cut(s) 170, 253
SspI AATATT 1 cut(s) 86
SspMI CTAG 1 cut(s) 368
StyD4I CCNGG 1 cut(s) 283
StyI CCWWGG 1 cut(s) 336
TaaI ACNGT 4 cut(s) 17, 28, 307, 436
TaiI ACGT 1 cut(s) 8
TaqI TCGA 1 cut(s) 348
TasI AATT 2 cut(s) 35, 193
TatI WGTACW 1 cut(s) 393
TauI GCSGC 1 cut(s) 173
Tru1I TTAA 3 cut(s) 11, 191, 417
Tru9I TTAA 3 cut(s) 11, 191, 417
TscAI CASTG 1 cut(s) 243
TseI GCWGC 1 cut(s) 383
TspDTI ATGAA 3 cut(s) 47, 336, 476
TspGWI ACGGA 1 cut(s) 435
TspRI CASTG 1 cut(s) 243
XapI RAATTY 2 cut(s) 35, 193
XspI CTAG 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.