Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0013548

Physical Location & Seq

Genomic Coordinates Forward (+)

31842381 .. 31844958

Gene Structure 2578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1249600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGTTTCACATGAAGAAATTGCATTTTTTTGACACAATGAACAAAACCCAGATGCTAACTTTGATTGTTGCACTGACTTCATCGACAACTTTGGTGTTTTTCCTGCTTTTCATCTACTTTTACTGCAAGAAAACTGGAAAAAGTGAGCAAAAAGATGTGGAAAAAACAGAGCAGAAGCAAGAGGAGGTTGTGGGGGCAGAGGAGGAGCTGGTGACTTTTCAGGATGGGGAGGACCTCACAGTCTGTGACATTCTCGATGCTCCGGGGGAAGTGATCGGAAAATCGAACTATGGCACGCTGTATAAGGCTTTGTTGCAGAGCAGCAACTCAGTGAAGTTGCTGAGGTTTATGAGGCCTGTTTGCACGGCAAAAGTTGACGATTTTGGTGAAGTTGTTCGGCATTTGGGGTGCGTAAGGCATCATAATTTGGTGCCTCTTTTGGGATTTTATGCAGGGCCGAGAGGTGAGAAGCTTCTGATTCATCCGTTTTATTGGCGCGGCAATCTGGCTCAATTTGTGAGAGAAAGCAACCCTGACTCTCACAGATGGCCCATAATCTATAGGATCTCAATTGGTATAGCCAAGGGCTTGGATCACCTTCACACTGGCTTCGAAAAGCCAATAATTCACGGCAATCTCAAGTCGAAAAACATACTCTTGGACCGCCACTATCGCCCTTTCATCTCGGATTTCAGCCTGCATCTGCTGTTGAATCCAACTGCTGGCCAGGAAATGCTTGAAGTCTCAGCATCCGAAGGCTACAAAGCACCTGAGCTGATAAAAATGCGGGATGCGAATGAAGAGACTGATATATACAGTCTTGGGGTTGTACTGCTTGAATTGCTCACAGGGAAGGAACCAATTAATCAAAATCCAACAACACCCGACGAGGATTTTAGTTTGCCAAATTTCATGAGGAATGCAGTGCTTGGACATAAAATCCATGACTTGTTCCATCCAGATTTGCTTCTCAATAGCGGCGTCGGCGTCGGCGACGGTGAAATCCCGGTCGCTAGAGAACAGATTCTCAAATTCTTTCAGCTTGCTATGGCATGTTGTGCTCCTTCTCCATCGCTTAGACCAAACACCAAGAAAGTTCTGTGGAAGCTTGAAGATATCGGAAGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

377

Amino Acids

42.59

Weight (kDa)

6.44

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	90 - 291	1e-24	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	90 - 366	2.6e-24	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07620
fragaria_vesca	FvH4_7g27020
malus_domestica	MD01G1177800.v1.1 MD07G1249600.v1.1
prunus_persica	Prupe.2G273300_v2.0.a1
pyrus_communis	pycom01g18860 pycom07g22290 pycom07g22300
rosa_chinensis	RchiOBHm_Chr1g0373821
rosa_laevigata	RLG00000026803
rosa_multiflora	Rmu_sc0013735.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283980
rosa_rugosa	Rorug01G0379500
rosa_samantha	Rh1AG389000 Rh1BG353200 Rh1CG366400 Rh1DG384100
rosa_wichuraiana	Rw1G034620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	239
AccB1I	GGYRCC	1 cut(s)	430
AccB7I	CCANNNNNTGG	1 cut(s)	722
AccII	CGCG	1 cut(s)	498
AciI	CCGC	4 cut(s)	498, 664, 787, 978
AclWI	GGATC	2 cut(s)	572, 600
AcoI	YGGCCR	1 cut(s)	724
AcsI	RAATTY	2 cut(s)	907, 1031
AcyI	GRCGYC	2 cut(s)	981, 987
AfaI	GTAC	1 cut(s)	831
AfiI	CCNNNNNNNGG	2 cut(s)	440, 722
AgsI	TTSAA	4 cut(s)	712, 740, 839, 1112
AjnI	CCWGG	1 cut(s)	726
AluBI	AGCT	5 cut(s)	208, 472, 775, 1042, 1108
AluI	AGCT	5 cut(s)	208, 472, 775, 1042, 1108
Alw21I	GWGCWC	1 cut(s)	1063
Alw26I	GTCTC	2 cut(s)	748, 797
AlwI	GGATC	2 cut(s)	572, 600
AoxI	GGCC	4 cut(s)	353, 455, 548, 724
ApeKI	GCWGC	1 cut(s)	321
ApoI	RAATTY	2 cut(s)	907, 1031
AseI	ATTAAT	1 cut(s)	864
Asp700I	GAANNNNTTC	2 cut(s)	393, 1023
AspLEI	GCGC	1 cut(s)	498
AspS9I	GGNCC	4 cut(s)	232, 455, 549, 661
AsuC2I	CCSGG	2 cut(s)	264, 1007
AsuHPI	GGTGA	5 cut(s)	223, 398, 476, 587, 1010
AsuII	TTCGAA	1 cut(s)	612
AvaII	GGWCC	2 cut(s)	232, 661
BalI	TGGCCA	1 cut(s)	726
BanI	GGYRCC	1 cut(s)	430
Bbv12I	GWGCWC	1 cut(s)	1063
BbvCI	CCTCAGC	1 cut(s)	341
BbvI	GCAGC	1 cut(s)	333
BccI	CCATC	4 cut(s)	218, 540, 963, 1078
BceAI	ACGGC	2 cut(s)	381, 646
BciT130I	CCWGG	1 cut(s)	728
BcnI	CCSGG	2 cut(s)	264, 1007
BcoDI	GTCTC	2 cut(s)	748, 797
BfaI	CTAG	1 cut(s)	1014
BfmI	CTRYAG	1 cut(s)	559
BisI	GCNGC	3 cut(s)	322, 499, 979
BlsI	GCNGC	3 cut(s)	323, 500, 980
Bme1390I	CCNGG	3 cut(s)	264, 728, 1007
Bme18I	GGWCC	2 cut(s)	232, 661
BmgT120I	GGNCC	4 cut(s)	232, 455, 549, 661
BmiI	GGNNCC	2 cut(s)	432, 858
BmrFI	CCNGG	3 cut(s)	264, 728, 1007
BmsI	GCATC	6 cut(s)	42, 247, 427, 709, 758, 781
Bpu10I	CCTNAGC	2 cut(s)	341, 771
Bpu14I	TTCGAA	1 cut(s)	612
BpuEI	CTTGAG	1 cut(s)	623
BpuMI	CCSGG	2 cut(s)	264, 1007
BsaHI	GRCGYC	2 cut(s)	981, 987
BsaJI	CCNNGG	2 cut(s)	263, 582
Bsc4I	CCNNNNNNNGG	2 cut(s)	440, 722
Bse1I	ACTGG	2 cut(s)	139, 610
BseBI	CCWGG	1 cut(s)	728
BseDI	CCNNGG	2 cut(s)	263, 582
BseGI	GGATG	5 cut(s)	229, 481, 749, 796, 955
BseLI	CCNNNNNNNGG	2 cut(s)	440, 722
BseMII	CTCAG	4 cut(s)	332, 342, 759, 762
BseNI	ACTGG	2 cut(s)	139, 610
BseRI	GAGGAG	3 cut(s)	197, 215, 218
BseXI	GCAGC	1 cut(s)	333
Bsh1236I	CGCG	1 cut(s)	498
Bsh1285I	CGRYCG	1 cut(s)	1011
BshFI	GGCC	4 cut(s)	355, 457, 550, 726
BshNI	GGYRCC	1 cut(s)	430
BsiEI	CGRYCG	1 cut(s)	1011
BsiHKAI	GWGCWC	1 cut(s)	1063
BsiSI	CCGG	2 cut(s)	263, 1007
BslI	CCNNNNNNNGG	2 cut(s)	440, 722
BsmAI	GTCTC	2 cut(s)	748, 797
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	4 cut(s)	355, 457, 550, 726
Bsp119I	TTCGAA	1 cut(s)	612
Bsp1286I	GDGCHC	1 cut(s)	1063
Bsp143I	GATC	3 cut(s)	273, 564, 592
BspACI	CCGC	4 cut(s)	498, 664, 787, 978
BspANI	GGCC	4 cut(s)	355, 457, 550, 726
BspCNI	CTCAG	4 cut(s)	333, 341, 758, 763
BspFNI	CGCG	1 cut(s)	498
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	2 cut(s)	432, 858
BspPI	GGATC	2 cut(s)	572, 600
BspT104I	TTCGAA	1 cut(s)	612
BspT107I	GGYRCC	1 cut(s)	430
BsrI	ACTGG	2 cut(s)	139, 610
BssECI	CCNNGG	2 cut(s)	263, 582
BssMI	GATC	3 cut(s)	273, 564, 592
BssNI	GRCGYC	2 cut(s)	981, 987
BssT1I	CCWWGG	1 cut(s)	582
Bst2UI	CCWGG	1 cut(s)	728
Bst4CI	ACNGT	3 cut(s)	241, 818, 998
Bst6I	CTCTTC	1 cut(s)	795
BstACI	GRCGYC	2 cut(s)	981, 987
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstBI	TTCGAA	1 cut(s)	612
BstC8I	GCNNGC	4 cut(s)	296, 698, 724, 1044
BstDEI	CTNAG	5 cut(s)	328, 341, 745, 771, 1076
BstF5I	GGATG	5 cut(s)	229, 481, 749, 796, 955
BstFNI	CGCG	1 cut(s)	498
BstHHI	GCGC	1 cut(s)	498
BstKTI	GATC	3 cut(s)	276, 567, 595
BstMAI	GTCTC	2 cut(s)	748, 797
BstMBI	GATC	3 cut(s)	273, 564, 592
BstMCI	CGRYCG	1 cut(s)	1011
BstMWI	GCNNNNNNNGC	4 cut(s)	672, 841, 984, 1058
BstNI	CCWGG	1 cut(s)	728
BstNSI	RCATGY	1 cut(s)	1056
BstSCI	CCNGG	3 cut(s)	262, 726, 1005
BstSFI	CTRYAG	1 cut(s)	559
BstUI	CGCG	1 cut(s)	498
BstV1I	GCAGC	1 cut(s)	333
BstX2I	RGATCY	1 cut(s)	564
BstXI	CCANNNNNNTGG	1 cut(s)	589
BstYI	RGATCY	1 cut(s)	564
BsuRI	GGCC	4 cut(s)	355, 457, 550, 726
BtgZI	GCGATG	1 cut(s)	1056
BtsCI	GGATG	5 cut(s)	229, 481, 749, 796, 955
BtsI	GCAGTG	1 cut(s)	930
BtsIMutI	CAGTG	4 cut(s)	71, 336, 603, 930
Cac8I	GCNNGC	4 cut(s)	296, 698, 724, 1044
CciI	TCATGA	1 cut(s)	912
CfoI	GCGC	1 cut(s)	498
Cfr13I	GGNCC	4 cut(s)	232, 455, 549, 661
CseI	GACGC	2 cut(s)	970, 976
Csp6I	GTAC	1 cut(s)	830
CviAII	CATG	4 cut(s)	10, 913, 944, 1053
CviQI	GTAC	1 cut(s)	830
DdeI	CTNAG	5 cut(s)	328, 341, 745, 771, 1076
DpnI	GATC	3 cut(s)	275, 566, 594
DpnII	GATC	3 cut(s)	273, 564, 592
DrdI	GACNNNNNNGTC	1 cut(s)	239
DseDI	GACNNNNNNGTC	1 cut(s)	239
EaeI	YGGCCR	1 cut(s)	724
Eam1104I	CTCTTC	1 cut(s)	795
EarI	CTCTTC	1 cut(s)	795
Eco130I	CCWWGG	1 cut(s)	582
Eco147I	AGGCCT	1 cut(s)	355
Eco32I	GATATC	1 cut(s)	1117
Eco47I	GGWCC	2 cut(s)	232, 661
EcoO109I	RGGNCCY	1 cut(s)	232
EcoRII	CCWGG	1 cut(s)	726
EcoRV	GATATC	1 cut(s)	1117
EcoT14I	CCWWGG	1 cut(s)	582
ErhI	CCWWGG	1 cut(s)	582
FaeI	CATG	4 cut(s)	13, 916, 947, 1056
FatI	CATG	4 cut(s)	9, 912, 943, 1052
FauI	CCCGC	1 cut(s)	780
Fnu4HI	GCNGC	3 cut(s)	322, 499, 979
FokI	GGATG	5 cut(s)	236, 468, 736, 803, 942
Fsp4HI	GCNGC	3 cut(s)	322, 499, 979
FspBI	CTAG	1 cut(s)	1014
GlaI	GCGC	1 cut(s)	497
GluI	GCNGC	3 cut(s)	322, 499, 979
HaeIII	GGCC	4 cut(s)	355, 457, 550, 726
HapII	CCGG	2 cut(s)	263, 1007
HgaI	GACGC	2 cut(s)	970, 976
HhaI	GCGC	1 cut(s)	498
Hin1I	GRCGYC	2 cut(s)	981, 987
Hin1II	CATG	4 cut(s)	13, 916, 947, 1056
Hin6I	GCGC	1 cut(s)	496
HinP1I	GCGC	1 cut(s)	496
HincII	GTYRAC	1 cut(s)	376
HindII	GTYRAC	1 cut(s)	376
HindIII	AAGCTT	2 cut(s)	470, 1106
HinfI	GANTC	4 cut(s)	478, 536, 712, 1024
HpaII	CCGG	2 cut(s)	263, 1007
HphI	GGTGA	5 cut(s)	223, 398, 476, 587, 1010
Hpy166II	GTNNAC	1 cut(s)	376
Hpy188I	TCNGA	5 cut(s)	278, 477, 688, 754, 1121
Hpy188III	TCNNGA	4 cut(s)	221, 254, 913, 959
Hpy8I	GTNNAC	1 cut(s)	376
Hpy99I	CGWCG	4 cut(s)	890, 986, 992, 998
HpyAV	CCTTC	4 cut(s)	608, 749, 847, 1074
HpyCH4III	ACNGT	3 cut(s)	241, 818, 998
HpyCH4V	TGCA	8 cut(s)	22, 71, 126, 316, 363, 452, 700, 923
HpyF10VI	GCNNNNNNNGC	4 cut(s)	672, 841, 984, 1058
HpyF3I	CTNAG	5 cut(s)	328, 341, 745, 771, 1076
Hsp92I	GRCGYC	2 cut(s)	981, 987
Hsp92II	CATG	4 cut(s)	13, 916, 947, 1056
HspAI	GCGC	1 cut(s)	496
Kzo9I	GATC	3 cut(s)	273, 564, 592
LmnI	GCTCC	3 cut(s)	205, 265, 1066
Lsp1109I	GCAGC	1 cut(s)	333
LweI	GCATC	6 cut(s)	42, 247, 427, 709, 758, 781
MaeI	CTAG	1 cut(s)	1014
MaeIII	GTNAC	2 cut(s)	211, 245
MalI	GATC	3 cut(s)	275, 566, 594
MboI	GATC	3 cut(s)	273, 564, 592
MboII	GAAGA	3 cut(s)	25, 812, 1124
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	1 cut(s)	564
MhlI	GDGCHC	1 cut(s)	1063
MlsI	TGGCCA	1 cut(s)	726
MluCI	AATT	9 cut(s)	17, 424, 512, 570, 624, 839, 861, 907, 1031
MluNI	TGGCCA	1 cut(s)	726
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	2 cut(s)	740, 899
Mox20I	TGGCCA	1 cut(s)	726
MroXI	GAANNNNTTC	2 cut(s)	393, 1023
MscI	TGGCCA	1 cut(s)	726
MseI	TTAA	1 cut(s)	864
Msp20I	TGGCCA	1 cut(s)	726
MspI	CCGG	2 cut(s)	263, 1007
MspR9I	CCNGG	3 cut(s)	264, 728, 1007
MunI	CAATTG	1 cut(s)	570
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	1 cut(s)	728
MvnI	CGCG	1 cut(s)	498
MwoI	GCNNNNNNNGC	4 cut(s)	672, 841, 984, 1058
NciI	CCSGG	2 cut(s)	264, 1007
NdeII	GATC	3 cut(s)	273, 564, 592
NlaIII	CATG	4 cut(s)	13, 916, 947, 1056
NlaIV	GGNNCC	2 cut(s)	432, 858
NmeAIII	GCCGAG	1 cut(s)	483
NmuCI	GTSAC	2 cut(s)	211, 245
NspI	RCATGY	1 cut(s)	1056
NspV	TTCGAA	1 cut(s)	612
PagI	TCATGA	1 cut(s)	912
PceI	AGGCCT	1 cut(s)	355
PcsI	WCGNNNNNNNCGW	1 cut(s)	990
PctI	GAATGC	1 cut(s)	925
PdmI	GAANNNNTTC	2 cut(s)	393, 1023
PfeI	GAWTC	3 cut(s)	478, 712, 1024
PflMI	CCANNNNNTGG	1 cut(s)	722
PkrI	GCNGC	3 cut(s)	323, 500, 980
PleI	GAGTC	1 cut(s)	530
PpsI	GAGTC	1 cut(s)	530
PpuMI	RGGWCCY	1 cut(s)	232
PshBI	ATTAAT	1 cut(s)	864
Psp5II	RGGWCCY	1 cut(s)	232
Psp6I	CCWGG	1 cut(s)	726
PspGI	CCWGG	1 cut(s)	726
PspN4I	GGNNCC	2 cut(s)	432, 858
PspPI	GGNCC	4 cut(s)	232, 455, 549, 661
PspPPI	RGGWCCY	1 cut(s)	232
PsuI	RGATCY	1 cut(s)	564
RsaI	GTAC	1 cut(s)	831
RsaNI	GTAC	1 cut(s)	830
SaqAI	TTAA	1 cut(s)	864
SatI	GCNGC	3 cut(s)	322, 499, 979
Sau3AI	GATC	3 cut(s)	273, 564, 592
Sau96I	GGNCC	4 cut(s)	232, 455, 549, 661
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	3 cut(s)	264, 728, 1007
SduI	GDGCHC	1 cut(s)	1063
SfaNI	GCATC	6 cut(s)	42, 247, 427, 709, 758, 781
SfcI	CTRYAG	1 cut(s)	559
SfuI	TTCGAA	1 cut(s)	612
SinI	GGWCC	2 cut(s)	232, 661
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
Sse9I	AATT	9 cut(s)	17, 424, 512, 570, 624, 839, 861, 907, 1031
SseBI	AGGCCT	1 cut(s)	355
SsiI	CCGC	4 cut(s)	498, 664, 787, 978
SspMI	CTAG	1 cut(s)	1014
StuI	AGGCCT	1 cut(s)	355
StyD4I	CCNGG	3 cut(s)	262, 726, 1005
StyI	CCWWGG	1 cut(s)	582
TaaI	ACNGT	3 cut(s)	241, 818, 998
TaqI	TCGA	5 cut(s)	83, 255, 284, 612, 644
TasI	AATT	9 cut(s)	17, 424, 512, 570, 624, 839, 861, 907, 1031
TatI	WGTACW	1 cut(s)	829
TauI	GCSGC	2 cut(s)	501, 981
TfiI	GAWTC	3 cut(s)	478, 712, 1024
Tru1I	TTAA	1 cut(s)	864
Tru9I	TTAA	1 cut(s)	864
TscAI	CASTG	4 cut(s)	78, 336, 610, 930
TseFI	GTSAC	2 cut(s)	211, 245
TseI	GCWGC	1 cut(s)	321
Tsp45I	GTSAC	2 cut(s)	211, 245
TspDTI	ATGAA	8 cut(s)	26, 53, 69, 100, 470, 670, 813, 901
TspGWI	ACGGA	1 cut(s)	474
TspRI	CASTG	4 cut(s)	78, 336, 610, 930
Van91I	CCANNNNNTGG	1 cut(s)	722
VpaK11BI	GGWCC	2 cut(s)	232, 661
VspI	ATTAAT	1 cut(s)	864
XapI	RAATTY	2 cut(s)	907, 1031
XceI	RCATGY	1 cut(s)	1056
XmnI	GAANNNNTTC	2 cut(s)	393, 1023
XspI	CTAG	1 cut(s)	1014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.