Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013548

Physical Location & Seq

Genomic Coordinates Forward (+)

27620450 .. 27623270

Gene Structure 2821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G273300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAAGAACACCCACCTGCTTAATTTGATTCTTGTACTGACTTCAACTGGAGTTTTGGTATCTTTTGTATTTTTGATCTACTTTTACTGCAAAAGAAGTGCAAAACATGAGCAACAAGATGTGGAAAACTCAGAGCAGAAGCATGAAGATGATGTGAAGGTAGAGGACTTGATGACTTTTCAGGATGGCCAAGACCTCAGAATTTGCGACATACTAGATGCTCCAGGGGAGGTGATTGGAAAGTCAAACTATGGAACACTGTACAAGGCTTTGTTGCAGAGTAGCAACTCAGTGAGGTTGCTGAGGTTTTTGAGGCCTGTGTGCACTGCAAAAGTTGAAGATTTTGGTGAAGTGGTTCAGTTGTTGGGGTGTATAAGGCATCCCAATTTGGTGCCTCTTCTGGGATTTTATGCAGGGCCAAGGGGTGAGAAGCTTTTGATTCATCCGTTTTATTGGCGTGGCAATCTGTCTCAGTTTGTAAGAGAAAGCAATCCTGACTCTCACAAATGGGCCATTATCTATAGAATCTCAGTTGGTATAGCAAAAGGTTTGGATCATCTTCACACTGGGTTGGAGAAGCCCATAATTCATGGCAATCTCAAGTTGAAAAACATACTTTTGGATCGCCATTACCAGCCATTCATCTCAGATTTCAGCCTACATCTTCTGTTGAATCCTACTGCTGGCCAAGAAATGCTTGAACTTTCAGCATCTCAAGGCTACAAAGCCCCTGAGCTGATCAAAATGAGGGATGCAAATGAAGAGACTGATATATTCAGCCTTGGGGTTATCTTACTTGAATTACTCACAGGGAAGGAACCAATCAATCAAAACCCAACAACACCTGATGAGGATTTTAGTTTGCCAAATTTTATGAGAAATGCAGTCCTTGGACATAGAATCCATGACTTGTTCCATCCAGGTTTACTTCTCAATAGCAGCATTGACGACGAACTCCCGGTTACTAAAGAACAGATTCTCAAGTTCTTTCAGCTTGCTATGACATGCTGTTCTCCTTCTCCATCACTTAGACCAAACACCAAGCAAGTTCTATGGAAGCTTGAAGAGATTGGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0009506 GO:0016020 GO:0030054 GO:0044464 GO:0055044 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

360

Amino Acids

40.72

Weight (kDa)

6.06

Isoelectric Point (pI)

42.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07620
fragaria_vesca	FvH4_7g27020
malus_domestica	MD01G1177800.v1.1 MD07G1249600.v1.1
prunus_persica	Prupe.2G273300_v2.0.a1
pyrus_communis	pycom01g18860 pycom07g22290 pycom07g22300
rosa_chinensis	RchiOBHm_Chr1g0373821
rosa_laevigata	RLG00000026803
rosa_multiflora	Rmu_sc0013735.1_g000009
rosa_roxburghii	Rroxscaffold_4G00283980
rosa_rugosa	Rorug01G0379500
rosa_samantha	Rh1AG389000 Rh1BG353200 Rh1CG366400 Rh1DG384100
rosa_wichuraiana	Rw1G034620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	24
Acc36I	ACCTGC	1 cut(s)	24
AccB1I	GGYRCC	1 cut(s)	391
AclWI	GGATC	2 cut(s)	561, 630
AcoI	YGGCCR	2 cut(s)	187, 685
AcsI	RAATTY	2 cut(s)	201, 868
AfaI	GTAC	2 cut(s)	36, 263
AfiI	CCNNNNNNNGG	2 cut(s)	401, 683
AgsI	TTSAA	7 cut(s)	45, 338, 607, 673, 701, 800, 1064
AjnI	CCWGG	2 cut(s)	223, 919
AluBI	AGCT	4 cut(s)	433, 736, 994, 1060
AluI	AGCT	4 cut(s)	433, 736, 994, 1060
Alw21I	GWGCWC	1 cut(s)	326
Alw26I	GTCTC	2 cut(s)	474, 758
Alw44I	GTGCAC	1 cut(s)	322
AlwI	GGATC	2 cut(s)	561, 630
AoxI	GGCC	5 cut(s)	187, 314, 416, 510, 685
ApaLI	GTGCAC	1 cut(s)	322
ApeKI	GCWGC	1 cut(s)	939
ApoI	RAATTY	2 cut(s)	201, 868
Asp700I	GAANNNNTTC	2 cut(s)	354, 975
AspS9I	GGNCC	2 cut(s)	416, 510
AsuC2I	CCSGG	1 cut(s)	959
AsuHPI	GGTGA	3 cut(s)	244, 359, 437
BaeGI	GKGCMC	1 cut(s)	326
BalI	TGGCCA	2 cut(s)	189, 687
BanI	GGYRCC	1 cut(s)	391
Bbv12I	GWGCWC	1 cut(s)	326
BbvCI	CCTCAGC	1 cut(s)	302
BbvI	GCAGC	1 cut(s)	951
BccI	CCATC	3 cut(s)	179, 924, 1030
BciT130I	CCWGG	2 cut(s)	225, 921
BclI	TGATCA	1 cut(s)	738
BcnI	CCSGG	1 cut(s)	959
BcoDI	GTCTC	2 cut(s)	474, 758
BfaI	CTAG	1 cut(s)	215
BfmI	CTRYAG	1 cut(s)	520
BfuAI	ACCTGC	1 cut(s)	24
BisI	GCNGC	1 cut(s)	940
BlsI	GCNGC	1 cut(s)	941
Bme1390I	CCNGG	3 cut(s)	225, 921, 959
BmgT120I	GGNCC	2 cut(s)	416, 510
BmiI	GGNNCC	2 cut(s)	393, 819
BmrFI	CCNGG	3 cut(s)	225, 921, 959
BmrI	ACTGGG	1 cut(s)	576
BmsI	GCATC	4 cut(s)	208, 388, 719, 742
BmuI	ACTGGG	1 cut(s)	576
BpmI	CTGGAG	2 cut(s)	69, 207
Bpu10I	CCTNAGC	2 cut(s)	302, 732
BpuEI	CTTGAG	3 cut(s)	584, 699, 965
BpuMI	CCSGG	1 cut(s)	959
BsaJI	CCNNGG	4 cut(s)	224, 419, 781, 889
BsaXI	ACNNNNNCTCC	2 cut(s)	42, 72
Bsc4I	CCNNNNNNNGG	2 cut(s)	401, 683
Bse1I	ACTGG	2 cut(s)	52, 571
BseBI	CCWGG	2 cut(s)	225, 921
BseDI	CCNNGG	4 cut(s)	224, 419, 781, 889
BseGI	GGATG	5 cut(s)	190, 379, 442, 757, 916
BseLI	CCNNNNNNNGG	2 cut(s)	401, 683
BseMII	CTCAG	8 cut(s)	144, 211, 293, 303, 485, 543, 660, 723
BseNI	ACTGG	2 cut(s)	52, 571
BseSI	GKGCMC	1 cut(s)	326
BseXI	GCAGC	1 cut(s)	951
BshFI	GGCC	5 cut(s)	189, 316, 418, 512, 687
BshNI	GGYRCC	1 cut(s)	391
BsiHKAI	GWGCWC	1 cut(s)	326
BsiSI	CCGG	1 cut(s)	959
BslI	CCNNNNNNNGG	2 cut(s)	401, 683
BsmAI	GTCTC	2 cut(s)	474, 758
BsnI	GGCC	5 cut(s)	189, 316, 418, 512, 687
Bsp1286I	GDGCHC	1 cut(s)	326
Bsp1407I	TGTACA	1 cut(s)	261
Bsp143I	GATC	4 cut(s)	75, 553, 622, 738
BspANI	GGCC	5 cut(s)	189, 316, 418, 512, 687
BspCNI	CTCAG	8 cut(s)	143, 210, 294, 302, 484, 542, 659, 724
BspLI	GGNNCC	2 cut(s)	393, 819
BspMI	ACCTGC	1 cut(s)	24
BspPI	GGATC	2 cut(s)	561, 630
BspT107I	GGYRCC	1 cut(s)	391
BsrGI	TGTACA	1 cut(s)	261
BsrI	ACTGG	2 cut(s)	52, 571
BssECI	CCNNGG	4 cut(s)	224, 419, 781, 889
BssMI	GATC	4 cut(s)	75, 553, 622, 738
BssT1I	CCWWGG	3 cut(s)	419, 781, 889
Bst2UI	CCWGG	2 cut(s)	225, 921
Bst4CI	ACNGT	1 cut(s)	261
Bst6I	CTCTTC	3 cut(s)	402, 756, 1059
BstAUI	TGTACA	1 cut(s)	261
BstC8I	GCNNGC	2 cut(s)	685, 996
BstDEI	CTNAG	9 cut(s)	130, 197, 289, 302, 471, 529, 646, 732, 1028
BstF5I	GGATG	5 cut(s)	190, 379, 442, 757, 916
BstKTI	GATC	4 cut(s)	78, 556, 625, 741
BstMAI	GTCTC	2 cut(s)	474, 758
BstMBI	GATC	4 cut(s)	75, 553, 622, 738
BstNI	CCWGG	2 cut(s)	225, 921
BstNSI	RCATGY	1 cut(s)	1008
BstSCI	CCNGG	3 cut(s)	223, 919, 957
BstSFI	CTRYAG	1 cut(s)	520
BstSLI	GKGCMC	1 cut(s)	326
BstV1I	GCAGC	1 cut(s)	951
BsuRI	GGCC	5 cut(s)	189, 316, 418, 512, 687
BtsCI	GGATG	5 cut(s)	190, 379, 442, 757, 916
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	4 cut(s)	257, 297, 324, 564
BveI	ACCTGC	1 cut(s)	24
Cac8I	GCNNGC	2 cut(s)	685, 996
Cfr13I	GGNCC	2 cut(s)	416, 510
Csp6I	GTAC	2 cut(s)	35, 262
CviAII	CATG	5 cut(s)	107, 143, 590, 905, 1005
CviQI	GTAC	2 cut(s)	35, 262
DdeI	CTNAG	9 cut(s)	130, 197, 289, 302, 471, 529, 646, 732, 1028
DpnI	GATC	4 cut(s)	77, 555, 624, 740
DpnII	GATC	4 cut(s)	75, 553, 622, 738
EaeI	YGGCCR	2 cut(s)	187, 685
Eam1104I	CTCTTC	3 cut(s)	402, 756, 1059
EarI	CTCTTC	3 cut(s)	402, 756, 1059
Eco130I	CCWWGG	3 cut(s)	419, 781, 889
Eco147I	AGGCCT	1 cut(s)	316
EcoRII	CCWGG	2 cut(s)	223, 919
EcoT14I	CCWWGG	3 cut(s)	419, 781, 889
ErhI	CCWWGG	3 cut(s)	419, 781, 889
FaeI	CATG	5 cut(s)	110, 146, 593, 908, 1008
FalI	AAGNNNNNCTT	2 cut(s)	681, 713
FatI	CATG	5 cut(s)	106, 142, 589, 904, 1004
FbaI	TGATCA	1 cut(s)	738
Fnu4HI	GCNGC	1 cut(s)	940
FokI	GGATG	5 cut(s)	197, 366, 429, 764, 903
Fsp4HI	GCNGC	1 cut(s)	940
FspBI	CTAG	1 cut(s)	215
GluI	GCNGC	1 cut(s)	940
GsuI	CTGGAG	2 cut(s)	69, 207
HaeIII	GGCC	5 cut(s)	189, 316, 418, 512, 687
HapII	CCGG	1 cut(s)	959
Hin1II	CATG	5 cut(s)	110, 146, 593, 908, 1008
HindIII	AAGCTT	2 cut(s)	431, 1058
HinfI	GANTC	7 cut(s)	28, 439, 497, 525, 673, 900, 976
HpaII	CCGG	1 cut(s)	959
HphI	GGTGA	3 cut(s)	244, 359, 437
Hpy166II	GTNNAC	2 cut(s)	324, 926
Hpy188I	TCNGA	3 cut(s)	133, 200, 649
Hpy188III	TCNNGA	2 cut(s)	182, 494
Hpy8I	GTNNAC	2 cut(s)	324, 926
Hpy99I	CGWCG	1 cut(s)	953
HpyAV	CCTTC	3 cut(s)	151, 808, 1026
HpyCH4III	ACNGT	1 cut(s)	261
HpyCH4V	TGCA	8 cut(s)	90, 101, 277, 324, 329, 413, 755, 884
HpyF3I	CTNAG	9 cut(s)	130, 197, 289, 302, 471, 529, 646, 732, 1028
Hsp92II	CATG	5 cut(s)	110, 146, 593, 908, 1008
Ksp22I	TGATCA	1 cut(s)	738
Kzo9I	GATC	4 cut(s)	75, 553, 622, 738
LmnI	GCTCC	1 cut(s)	226
Lsp1109I	GCAGC	1 cut(s)	951
LweI	GCATC	4 cut(s)	208, 388, 719, 742
MaeI	CTAG	1 cut(s)	215
MaeIII	GTNAC	2 cut(s)	961, 1073
MalI	GATC	4 cut(s)	77, 555, 624, 740
MboI	GATC	4 cut(s)	75, 553, 622, 738
MboII	GAAGA	8 cut(s)	16, 158, 350, 389, 551, 656, 773, 1076
MhlI	GDGCHC	1 cut(s)	326
MlsI	TGGCCA	2 cut(s)	189, 687
MluCI	AATT	6 cut(s)	22, 201, 385, 585, 800, 868
MluNI	TGGCCA	2 cut(s)	189, 687
MlyI	GAGTC	1 cut(s)	491
MmeI	TCCRAC	1 cut(s)	552
MnlI	CCTC	9 cut(s)	157, 206, 223, 288, 297, 306, 405, 741, 844
Mox20I	TGGCCA	2 cut(s)	189, 687
MroXI	GAANNNNTTC	2 cut(s)	354, 975
MscI	TGGCCA	2 cut(s)	189, 687
MseI	TTAA	1 cut(s)	21
MslI	CAYNNNNRTG	1 cut(s)	147
Msp20I	TGGCCA	2 cut(s)	189, 687
MspI	CCGG	1 cut(s)	959
MspR9I	CCNGG	3 cut(s)	225, 921, 959
MvaI	CCWGG	2 cut(s)	225, 921
NciI	CCSGG	1 cut(s)	959
NdeII	GATC	4 cut(s)	75, 553, 622, 738
NlaIII	CATG	5 cut(s)	110, 146, 593, 908, 1008
NlaIV	GGNNCC	2 cut(s)	393, 819
NspI	RCATGY	1 cut(s)	1008
PaqCI	CACCTGC	1 cut(s)	24
PceI	AGGCCT	1 cut(s)	316
PdmI	GAANNNNTTC	2 cut(s)	354, 975
PfeI	GAWTC	6 cut(s)	28, 439, 525, 673, 900, 976
PkrI	GCNGC	1 cut(s)	941
PleI	GAGTC	1 cut(s)	491
PpsI	GAGTC	1 cut(s)	491
Psp6I	CCWGG	2 cut(s)	223, 919
PspGI	CCWGG	2 cut(s)	223, 919
PspN4I	GGNNCC	2 cut(s)	393, 819
PspPI	GGNCC	2 cut(s)	416, 510
RsaI	GTAC	2 cut(s)	36, 263
RsaNI	GTAC	2 cut(s)	35, 262
RseI	CAYNNNNRTG	1 cut(s)	147
SaqAI	TTAA	1 cut(s)	21
SatI	GCNGC	1 cut(s)	940
Sau3AI	GATC	4 cut(s)	75, 553, 622, 738
Sau96I	GGNCC	2 cut(s)	416, 510
SchI	GAGTC	1 cut(s)	491
ScrFI	CCNGG	3 cut(s)	225, 921, 959
SduI	GDGCHC	1 cut(s)	326
SfaNI	GCATC	4 cut(s)	208, 388, 719, 742
SfcI	CTRYAG	1 cut(s)	520
SmiMI	CAYNNNNRTG	1 cut(s)	147
SmlI	CTYRAG	3 cut(s)	599, 714, 980
SmoI	CTYRAG	3 cut(s)	599, 714, 980
Sse9I	AATT	6 cut(s)	22, 201, 385, 585, 800, 868
SseBI	AGGCCT	1 cut(s)	316
SspMI	CTAG	1 cut(s)	215
StuI	AGGCCT	1 cut(s)	316
StyD4I	CCNGG	3 cut(s)	223, 919, 957
StyI	CCWWGG	3 cut(s)	419, 781, 889
TaaI	ACNGT	1 cut(s)	261
TasI	AATT	6 cut(s)	22, 201, 385, 585, 800, 868
TatI	WGTACW	2 cut(s)	34, 261
TfiI	GAWTC	6 cut(s)	28, 439, 525, 673, 900, 976
Tru1I	TTAA	1 cut(s)	21
Tru9I	TTAA	1 cut(s)	21
TscAI	CASTG	4 cut(s)	264, 297, 331, 571
TseI	GCWGC	1 cut(s)	939
TspDTI	ATGAA	6 cut(s)	17, 159, 431, 578, 631, 774
TspGWI	ACGGA	1 cut(s)	435
TspRI	CASTG	4 cut(s)	264, 297, 331, 571
VneI	GTGCAC	1 cut(s)	322
XapI	RAATTY	2 cut(s)	201, 868
XceI	RCATGY	1 cut(s)	1008
XmnI	GAANNNNTTC	2 cut(s)	354, 975
XspI	CTAG	1 cut(s)	215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.