Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0002852

Physical Location & Seq

Genomic Coordinates Forward (+)

33176795 .. 33180333

Gene Structure 3539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1262500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCTGTTGCCAGGAGCAACAGCAGCAGTGCAGCATCAACGTGGCCGTGCAATTGTTACAAAGTCGCAAGCTTGACTTCCTCCATTTTAGATGCAAACGAGACTTCAAATCTAAAAGATCGGTACATTCTAGGAGAGCAGTTAGGTTGGGGGCAGTTTGGTGTTATCAGGGTGTGCACTGATAAGTTGACCGGAGAGGTCTTGGCATGTAAATCAATTGCTAAAGATCGATTAGTGACCTCAGACGATGTGCGAGGCATTAAACTTGAGATTGAAATTATGACCAGGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCGGTGTATGAAGAGGAAGAGTATGTCCATTTGGTGATGGAGCTTTGCGCAGGAGGAGAGCTTTTCCACCAGTTAGAGAAGCACGGTCGATTCTCCAAGTCTGATGCCAGGGTTCTCTTTAGGCATCTGATTCAGGTAGTTCTATATTGTCACGAAAATGGGGTTGTTCACAGAGATTTGAAACCAGAGAACATCCTATTGGCCACAAAAGCCTCCTCGTCTCCAATCAAGTTGGCAGATTTTGGTCTTGCAACCTACATCAAGCCTGGGCAGAGTTTGCATGGGTTAGTTGGTAGTCCGTTTTATATAGCTCCTGAGGTACTTGCAGGTAGCTATAACCAGGCTGCAGATGTGTGGAGTGCGGGCGTTATTCTCTACATTCTTCTTAGTGGAATGCCGCCATTTTGGGGGAAGACAAAATCACGGATATTTGATGCTGTTAGGACAGCTGACCTGAAATTCCCATCTGATCCCTGGGATCGCATTACTGGATCAGCTAAGGATTTGATTAGAGCAATGCTCTGTAAAGATCCTTCACAAAGGCTCACTGCTCAGCAGGTTTTAGATCATCCTTGGATGAGGGTTAATGAACCATATCCTAAACAGCCGAGTCAATGTGAAAATGGAGGCCGTGGAGAATGTGATGTAGCCGGCAGCTCATTCTGTACTATGTCCAGGAGTCAAGACATCAGCTTTGGCACTGCATCACATAATGCATGTGATGCCCAATCACCTACATTTACTTGTAGGTCATCTTTTTCTGCTCTCATGGTGGAACCATTTACTCCCCACTTAGCATCCGGCGGGTTTTCATTCTGCAGCGATGGTGATTCTAATAGTTTGGAATTCTCCTCCCCCATTCCCTCAATGCCAAGCTTTGCATTCTTCAGCCCTGGTTCTTTGGTTGAGGAAGGTAGTTGTGCGATAGAGTTTTCAGCCAGCATATCCAGAGTAGACGCAATTCATGGAGGTTCCCTTTCGTTCAGACTTGAAACGAGACAAATGGTTAACAAACCAGCCGAAGCTAAAAGGACAGGTGGAACAAGGACGTCAGCCATTCACAACAAGAGAAACCGTACAATTGGACTTGGTGAGCACGAGCAACTAGATTTCATGGTGACCGAGTCAATCATTCGTTGGTCATCATGCACAAATCTTCCTACATCTCTGAGATCTTCTCTTGTCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04012 ko04020 ko04024 ko04066 ko04114 ko04217 ko04261 ko04310 ko04360 ko04713 ko04720 ko04722 ko04725 ko04728 ko04740 ko04745 ko04750 ko04911 ko04912 ko04916 ko04921 ko04922 ko04925 ko04934 ko04971 ko05031 ko05152 ko05200 ko05205 ko05214 map04012 map04020 map04024 map04066 map04114 map04217 map04261 map04310 map04360 map04713 map04720 map04722 map04725 map04728 map04740 map04745 map04750 map04911 map04912 map04916 map04921 map04922 map04925 map04934 map04971 map05031 map05152 map05200 map05205 map05214

Pfam Domains

Protein Families

Pkinase

Protein Analysis

504

Amino Acids

55.01

Weight (kDa)

6.54

Isoelectric Point (pI)

51.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	43 - 300	4.8e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	44 - 295	3.9e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12580
fragaria_vesca	FvH4_5g01410 FvH4_5g01410 FvH4_5g01410 FvH4_7g28910 FvH4_7g28910 FvH4_7g28910
malus_domestica	MD01G1195700.v1.1 MD04G1068700.v1.1 MD07G1262500.v1.1
prunus_persica	Prupe.2G289000_v2.0.a1 Prupe.5G089500_v2.0.a1 Prupe.5G089500_v2.0.a1
pyrus_communis	pycom01g20630 pycom04g06200 pycom07g24150
rosa_chinensis	RchiOBHm_Chr1g0376571 RchiOBHm_Chr7g0199461
rosa_laevigata	RLG00000003791 RLG00000026597
rosa_multiflora	Rmu_sc0001308.1_g000003 Rmu_sc0003890.1_g000006 Rmu_sc0005594.1_g000017
rosa_roxburghii	Rroxscaffold_3G00256710 Rroxscaffold_4G00281980
rosa_rugosa	Rorug01G0396500 Rorug07G0054100 Rorug07G0054200 Rorug07G0054200 Rorug07G0054300
rosa_samantha	Rh1AG412300 Rh1BG372700 Rh1CG386600 Rh1DG403600 Rh7AG179200 Rh7BG182600 Rh7DG182100
rosa_wichuraiana	Rw1G036210 Rw7G015740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1373
Acc16I	TGCGCA	1 cut(s)	370
Acc36I	ACCTGC	2 cut(s)	638, 868
AccB1I	GGYRCC	1 cut(s)	297
AccI	GTMKAC	1 cut(s)	1275
AciI	CCGC	4 cut(s)	323, 683, 719, 1125
AclWI	GGATC	4 cut(s)	785, 807, 820, 845
AcoI	YGGCCR	2 cut(s)	44, 522
AcsI	RAATTY	2 cut(s)	779, 1166
AcuI	CTGAAG	1 cut(s)	1192
AcyI	GRCGYC	1 cut(s)	1370
AfaI	GTAC	4 cut(s)	125, 642, 988, 1399
AfiI	CCNNNNNNNGG	1 cut(s)	728
AgsI	TTSAA	4 cut(s)	108, 275, 502, 1313
AjnI	CCWGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
AjuI	GAANNNNNNNTTGG	2 cut(s)	503, 535
Alw21I	GWGCWC	2 cut(s)	179, 1419
Alw26I	GTCTC	3 cut(s)	95, 546, 1312
Alw44I	GTGCAC	1 cut(s)	175
AlwI	GGATC	4 cut(s)	785, 807, 820, 845
AoxI	GGCC	3 cut(s)	44, 522, 949
ApaLI	GTGCAC	1 cut(s)	175
ApeKI	GCWGC	5 cut(s)	24, 32, 665, 975, 1140
ApoI	RAATTY	2 cut(s)	779, 1166
ArsI	GACNNNNNNTTYG	2 cut(s)	998, 1030
AspLEI	GCGC	1 cut(s)	371
AsuHPI	GGTGA	5 cut(s)	367, 1044, 1160, 1424, 1450
AxyI	CCTNAGG	1 cut(s)	636
BaeGI	GKGCMC	2 cut(s)	179, 300
BalI	TGGCCA	1 cut(s)	524
BanI	GGYRCC	1 cut(s)	297
BarI	GAAGNNNNNNTAC	2 cut(s)	838, 870
BauI	CACGAG	1 cut(s)	1418
BbsI	GAAGAC	1 cut(s)	740
Bbv12I	GWGCWC	2 cut(s)	179, 1419
BbvI	GCAGC	5 cut(s)	36, 44, 652, 987, 1152
BccI	CCATC	3 cut(s)	352, 793, 1139
BceAI	ACGGC	2 cut(s)	31, 936
BciT130I	CCWGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
BcoDI	GTCTC	3 cut(s)	95, 546, 1312
BfaI	CTAG	2 cut(s)	131, 1427
BfmI	CTRYAG	2 cut(s)	666, 1138
BfuAI	ACCTGC	2 cut(s)	638, 868
BglII	AGATCT	2 cut(s)	313, 1493
BisI	GCNGC	6 cut(s)	25, 33, 666, 719, 976, 1141
BlpI	GCTNAGC	1 cut(s)	873
BlsI	GCNGC	6 cut(s)	26, 34, 667, 720, 977, 1142
Bme1390I	CCNGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
BmiI	GGNNCC	3 cut(s)	299, 1098, 1294
BmrFI	CCNGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
BmsI	GCATC	8 cut(s)	44, 82, 415, 454, 745, 1033, 1034, 1127
BpiI	GAAGAC	1 cut(s)	740
BplI	GAGNNNNNCTC	3 cut(s)	825, 857, 1483
Bpu10I	CCTNAGC	1 cut(s)	819
Bpu1102I	GCTNAGC	1 cut(s)	873
BpuEI	CTTGAG	2 cut(s)	287, 302
Bsa29I	ATCGAT	1 cut(s)	229
BsaHI	GRCGYC	1 cut(s)	1370
BsaJI	CCNNGG	7 cut(s)	429, 587, 794, 795, 893, 952, 1213
BsaWI	WCCGGW	1 cut(s)	191
Bsc4I	CCNNNNNNNGG	1 cut(s)	728
Bse118I	RCCGGY	1 cut(s)	971
Bse1I	ACTGG	2 cut(s)	391, 814
Bse21I	CCTNAGG	1 cut(s)	636
Bse3DI	GCAATG	1 cut(s)	843
BseBI	CCWGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
BseCI	ATCGAT	1 cut(s)	229
BseDI	CCNNGG	7 cut(s)	429, 587, 794, 795, 893, 952, 1213
BseGI	GGATG	4 cut(s)	513, 889, 903, 1118
BseLI	CCNNNNNNNGG	1 cut(s)	728
BseMI	GCAATG	1 cut(s)	843
BseMII	CTCAG	4 cut(s)	255, 627, 887, 1481
BseNI	ACTGG	2 cut(s)	391, 814
BseRI	GAGGAG	3 cut(s)	390, 526, 1162
BseSI	GKGCMC	2 cut(s)	179, 300
BseXI	GCAGC	5 cut(s)	36, 44, 652, 987, 1152
BsgI	GTGCAG	1 cut(s)	51
Bsh1285I	CGRYCG	1 cut(s)	409
BshFI	GGCC	3 cut(s)	46, 524, 951
BshNI	GGYRCC	1 cut(s)	297
BshVI	ATCGAT	1 cut(s)	229
BsiEI	CGRYCG	1 cut(s)	409
BsiHKAI	GWGCWC	2 cut(s)	179, 1419
BsiSI	CCGG	3 cut(s)	192, 972, 1122
BslI	CCNNNNNNNGG	1 cut(s)	728
BsmAI	GTCTC	3 cut(s)	95, 546, 1312
BsmBI	CGTCTC	1 cut(s)	546
BsmI	GAATGC	2 cut(s)	720, 1202
BsnI	GGCC	3 cut(s)	46, 524, 951
Bsp1286I	GDGCHC	3 cut(s)	179, 300, 1419
Bsp143I	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
Bsp1720I	GCTNAGC	1 cut(s)	873
BspACI	CCGC	4 cut(s)	323, 683, 719, 1125
BspANI	GGCC	3 cut(s)	46, 524, 951
BspCNI	CTCAG	4 cut(s)	254, 628, 886, 1482
BspDI	ATCGAT	1 cut(s)	229
BspLI	GGNNCC	3 cut(s)	299, 1098, 1294
BspMAI	CTGCAG	2 cut(s)	670, 1142
BspMI	ACCTGC	2 cut(s)	638, 868
BspPI	GGATC	4 cut(s)	785, 807, 820, 845
BspT107I	GGYRCC	1 cut(s)	297
BsrDI	GCAATG	1 cut(s)	843
BsrFI	RCCGGY	1 cut(s)	971
BsrI	ACTGG	2 cut(s)	391, 814
BssAI	RCCGGY	1 cut(s)	971
BssECI	CCNNGG	7 cut(s)	429, 587, 794, 795, 893, 952, 1213
BssMI	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
BssNI	GRCGYC	1 cut(s)	1370
BssSI	CACGAG	1 cut(s)	1418
BssT1I	CCWWGG	1 cut(s)	893
Bst2BI	CACGAG	1 cut(s)	1418
Bst2UI	CCWGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
Bst4CI	ACNGT	2 cut(s)	407, 1397
Bst6I	CTCTTC	2 cut(s)	327, 333
BstACI	GRCGYC	1 cut(s)	1370
BstAPI	GCANNNNNTGC	2 cut(s)	598, 1043
BstC8I	GCNNGC	4 cut(s)	70, 685, 973, 1261
BstDEI	CTNAG	7 cut(s)	241, 636, 707, 819, 873, 1114, 1490
BstDSI	CCRYGG	1 cut(s)	952
BstEII	GGTNACC	1 cut(s)	1438
BstF5I	GGATG	4 cut(s)	513, 889, 903, 1118
BstHHI	GCGC	1 cut(s)	371
BstKTI	GATC	9 cut(s)	121, 229, 316, 793, 802, 815, 853, 889, 1496
BstMAI	GTCTC	3 cut(s)	95, 546, 1312
BstMBI	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
BstMCI	CGRYCG	1 cut(s)	409
BstMWI	GCNNNNNNNGC	4 cut(s)	24, 530, 598, 1043
BstNI	CCWGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
BstNSI	RCATGY	2 cut(s)	210, 1041
BstPI	GGTNACC	1 cut(s)	1438
BstSCI	CCNGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
BstSFI	CTRYAG	2 cut(s)	666, 1138
BstSLI	GKGCMC	2 cut(s)	179, 300
BstV1I	GCAGC	5 cut(s)	36, 44, 652, 987, 1152
BstV2I	GAAGAC	1 cut(s)	740
BstX2I	RGATCY	3 cut(s)	313, 850, 1493
BstYI	RGATCY	3 cut(s)	313, 850, 1493
Bsu15I	ATCGAT	1 cut(s)	229
Bsu36I	CCTNAGG	1 cut(s)	636
BsuRI	GGCC	3 cut(s)	46, 524, 951
BsuTUI	ATCGAT	1 cut(s)	229
BtgI	CCRYGG	1 cut(s)	952
BtgZI	GCGATG	1 cut(s)	1158
BtsCI	GGATG	4 cut(s)	513, 889, 903, 1118
BtsI	GCAGTG	3 cut(s)	34, 867, 1020
BtsIMutI	CAGTG	4 cut(s)	34, 177, 867, 1020
BveI	ACCTGC	2 cut(s)	638, 868
Cac8I	GCNNGC	4 cut(s)	70, 685, 973, 1261
CfoI	GCGC	1 cut(s)	371
Cfr10I	RCCGGY	1 cut(s)	971
ClaI	ATCGAT	1 cut(s)	229
CseI	GACGC	1 cut(s)	1286
CsiI	ACCWGGT	1 cut(s)	284
Csp6I	GTAC	4 cut(s)	124, 641, 987, 1398
CviAII	CATG	7 cut(s)	207, 602, 1038, 1090, 1286, 1435, 1467
CviQI	GTAC	4 cut(s)	124, 641, 987, 1398
DdeI	CTNAG	7 cut(s)	241, 636, 707, 819, 873, 1114, 1490
DpnI	GATC	9 cut(s)	120, 228, 315, 792, 801, 814, 852, 888, 1495
DpnII	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
EaeI	YGGCCR	2 cut(s)	44, 522
Eam1104I	CTCTTC	2 cut(s)	327, 333
EarI	CTCTTC	2 cut(s)	327, 333
Eco130I	CCWWGG	1 cut(s)	893
Eco57I	CTGAAG	1 cut(s)	1192
Eco81I	CCTNAGG	1 cut(s)	636
Eco91I	GGTNACC	1 cut(s)	1438
EcoO65I	GGTNACC	1 cut(s)	1438
EcoRI	GAATTC	1 cut(s)	1166
EcoRII	CCWGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
EcoT14I	CCWWGG	1 cut(s)	893
EcoT22I	ATGCAT	1 cut(s)	1039
ErhI	CCWWGG	1 cut(s)	893
Esp3I	CGTCTC	1 cut(s)	546
FaeI	CATG	7 cut(s)	210, 605, 1041, 1093, 1289, 1438, 1470
FalI	AAGNNNNNCTT	2 cut(s)	61, 93
FatI	CATG	7 cut(s)	206, 601, 1037, 1089, 1285, 1434, 1466
FauI	CCCGC	2 cut(s)	676, 1118
FblI	GTMKAC	1 cut(s)	1275
Fnu4HI	GCNGC	6 cut(s)	25, 33, 666, 719, 976, 1141
FokI	GGATG	4 cut(s)	500, 876, 910, 1105
Fsp4HI	GCNGC	6 cut(s)	25, 33, 666, 719, 976, 1141
FspBI	CTAG	2 cut(s)	131, 1427
FspI	TGCGCA	1 cut(s)	370
GlaI	GCGC	1 cut(s)	370
GluI	GCNGC	6 cut(s)	25, 33, 666, 719, 976, 1141
HaeIII	GGCC	3 cut(s)	46, 524, 951
HapII	CCGG	3 cut(s)	192, 972, 1122
HgaI	GACGC	1 cut(s)	1286
HhaI	GCGC	1 cut(s)	371
Hin1I	GRCGYC	1 cut(s)	1370
Hin1II	CATG	7 cut(s)	210, 605, 1041, 1093, 1289, 1438, 1470
Hin6I	GCGC	1 cut(s)	369
HinP1I	GCGC	1 cut(s)	369
HincII	GTYRAC	2 cut(s)	189, 1330
HindII	GTYRAC	2 cut(s)	189, 1330
HindIII	AAGCTT	2 cut(s)	70, 1195
HinfI	GANTC	6 cut(s)	411, 451, 931, 1000, 1151, 1445
HpaI	GTTAAC	1 cut(s)	1330
HpaII	CCGG	3 cut(s)	192, 972, 1122
HphI	GGTGA	5 cut(s)	367, 1044, 1160, 1424, 1450
Hpy166II	GTNNAC	5 cut(s)	177, 189, 490, 1276, 1330
Hpy188I	TCNGA	6 cut(s)	244, 424, 450, 790, 1307, 1491
Hpy188III	TCNNGA	4 cut(s)	473, 635, 1004, 1269
Hpy8I	GTNNAC	5 cut(s)	177, 189, 490, 1276, 1330
HpyAV	CCTTC	2 cut(s)	864, 1226
HpyCH4III	ACNGT	2 cut(s)	407, 1397
HpyCH4IV	ACGT	2 cut(s)	41, 1370
HpyF10VI	GCNNNNNNNGC	4 cut(s)	24, 530, 598, 1043
HpyF3I	CTNAG	7 cut(s)	241, 636, 707, 819, 873, 1114, 1490
HpySE526I	ACGT	2 cut(s)	41, 1370
Hsp92I	GRCGYC	1 cut(s)	1370
Hsp92II	CATG	7 cut(s)	210, 605, 1041, 1093, 1289, 1438, 1470
HspAI	GCGC	1 cut(s)	369
KroI	GCCGGC	1 cut(s)	971
KroNI	GCCGGC	1 cut(s)	973
KspAI	GTTAAC	1 cut(s)	1330
Kzo9I	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
LmnI	GCTCC	3 cut(s)	15, 361, 637
Lsp1109I	GCAGC	5 cut(s)	36, 44, 652, 987, 1152
LweI	GCATC	8 cut(s)	44, 82, 415, 454, 745, 1033, 1034, 1127
MabI	ACCWGGT	1 cut(s)	284
MaeI	CTAG	2 cut(s)	131, 1427
MaeII	ACGT	2 cut(s)	41, 1370
MaeIII	GTNAC	4 cut(s)	56, 235, 470, 1438
MalI	GATC	9 cut(s)	120, 228, 315, 792, 801, 814, 852, 888, 1495
MboI	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
MboII	GAAGA	7 cut(s)	344, 350, 695, 745, 1198, 1469, 1488
MfeI	CAATTG	3 cut(s)	52, 216, 1401
MflI	RGATCY	3 cut(s)	313, 850, 1493
MhlI	GDGCHC	3 cut(s)	179, 300, 1419
MlsI	TGGCCA	1 cut(s)	524
MluCI	AATT	7 cut(s)	52, 216, 276, 779, 1166, 1281, 1401
MluNI	TGGCCA	1 cut(s)	524
MlyI	GAGTC	3 cut(s)	940, 1009, 1454
Mox20I	TGGCCA	1 cut(s)	524
Mph1103I	ATGCAT	1 cut(s)	1039
MroNI	GCCGGC	1 cut(s)	971
MscI	TGGCCA	1 cut(s)	524
MseI	TTAA	3 cut(s)	261, 906, 1329
MslI	CAYNNNNRTG	3 cut(s)	40, 303, 477
Msp20I	TGGCCA	1 cut(s)	524
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	3 cut(s)	192, 972, 1122
MspR9I	CCNGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
MunI	CAATTG	3 cut(s)	52, 216, 1401
Mva1269I	GAATGC	2 cut(s)	720, 1202
MvaI	CCWGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
MwoI	GCNNNNNNNGC	4 cut(s)	24, 530, 598, 1043
NaeI	GCCGGC	1 cut(s)	973
NdeII	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
NgoMIV	GCCGGC	1 cut(s)	971
NlaIII	CATG	7 cut(s)	210, 605, 1041, 1093, 1289, 1438, 1470
NlaIV	GGNNCC	3 cut(s)	299, 1098, 1294
NmeAIII	GCCGAG	1 cut(s)	954
NmuCI	GTSAC	3 cut(s)	235, 470, 1438
NsbI	TGCGCA	1 cut(s)	370
NsiI	ATGCAT	1 cut(s)	1039
NspI	RCATGY	2 cut(s)	210, 1041
PasI	CCCWGGG	1 cut(s)	795
PctI	GAATGC	2 cut(s)	720, 1202
PdiI	GCCGGC	1 cut(s)	973
PfeI	GAWTC	3 cut(s)	411, 451, 1151
PflFI	GACNNNGTC	1 cut(s)	1444
PfoI	TCCNGGA	1 cut(s)	995
PkrI	GCNGC	6 cut(s)	26, 34, 667, 720, 977, 1142
PleI	GAGTC	3 cut(s)	939, 1008, 1453
PpsI	GAGTC	3 cut(s)	939, 1008, 1453
Psp6I	CCWGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
PspEI	GGTNACC	1 cut(s)	1438
PspGI	CCWGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
PspN4I	GGNNCC	3 cut(s)	299, 1098, 1294
PstI	CTGCAG	2 cut(s)	670, 1142
PsuI	RGATCY	3 cut(s)	313, 850, 1493
PsyI	GACNNNGTC	1 cut(s)	1444
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	4 cut(s)	125, 642, 988, 1399
RsaNI	GTAC	4 cut(s)	124, 641, 987, 1398
RseI	CAYNNNNRTG	3 cut(s)	40, 303, 477
SaqAI	TTAA	3 cut(s)	261, 906, 1329
SatI	GCNGC	6 cut(s)	25, 33, 666, 719, 976, 1141
Sau3AI	GATC	9 cut(s)	118, 226, 313, 790, 799, 812, 850, 886, 1493
SchI	GAGTC	3 cut(s)	940, 1009, 1454
ScrFI	CCNGG	8 cut(s)	13, 286, 430, 588, 662, 796, 997, 1215
SduI	GDGCHC	3 cut(s)	179, 300, 1419
SexAI	ACCWGGT	1 cut(s)	284
SfaNI	GCATC	8 cut(s)	44, 82, 415, 454, 745, 1033, 1034, 1127
SfcI	CTRYAG	2 cut(s)	666, 1138
SmiMI	CAYNNNNRTG	3 cut(s)	40, 303, 477
SmlI	CTYRAG	2 cut(s)	266, 317
SmoI	CTYRAG	2 cut(s)	266, 317
Sse9I	AATT	7 cut(s)	52, 216, 276, 779, 1166, 1281, 1401
SsiI	CCGC	4 cut(s)	323, 683, 719, 1125
SspMI	CTAG	2 cut(s)	131, 1427
StyD4I	CCNGG	8 cut(s)	11, 284, 428, 586, 660, 794, 995, 1213
StyI	CCWWGG	1 cut(s)	893
TaaI	ACNGT	2 cut(s)	407, 1397
TaiI	ACGT	2 cut(s)	44, 1373
TaqI	TCGA	2 cut(s)	229, 409
TaqII	GACCGA	1 cut(s)	1457
TasI	AATT	7 cut(s)	52, 216, 276, 779, 1166, 1281, 1401
TatI	WGTACW	1 cut(s)	986
TauI	GCSGC	1 cut(s)	721
TfiI	GAWTC	3 cut(s)	411, 451, 1151
Tru1I	TTAA	3 cut(s)	261, 906, 1329
Tru9I	TTAA	3 cut(s)	261, 906, 1329
TscAI	CASTG	4 cut(s)	34, 184, 874, 1027
TseFI	GTSAC	3 cut(s)	235, 470, 1438
TseI	GCWGC	5 cut(s)	24, 32, 665, 975, 1140
Tsp45I	GTSAC	3 cut(s)	235, 470, 1438
TspDTI	ATGAA	5 cut(s)	345, 924, 1122, 1274, 1423
TspGWI	ACGGA	2 cut(s)	609, 760
TspRI	CASTG	4 cut(s)	34, 184, 874, 1027
Tth111I	GACNNNGTC	1 cut(s)	1444
VneI	GTGCAC	1 cut(s)	175
XapI	RAATTY	2 cut(s)	779, 1166
XceI	RCATGY	2 cut(s)	210, 1041
XcmI	CCANNNNNNNNNTGG	1 cut(s)	792
XmiI	GTMKAC	1 cut(s)	1275
XspI	CTAG	2 cut(s)	131, 1427
ZraI	GACGTC	1 cut(s)	1371
Zsp2I	ATGCAT	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.