Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002852

Physical Location & Seq

Genomic Coordinates Forward (+)

51103973 .. 51107453

Gene Structure 3481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00256710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1569 bp

ATGGAAATAGCCAACAAAATCGACATTAGGCAGCCTTCAATTCGAGTCTACAGTTGTTACAGAGTGGTAAGCCATTTTGACACTATTCTTGAAGCAACCCAAGTGGGAAATTTGAAAGACCAGTATATTCTGGGTGAGCAATTGGGATGGGGGCAGTTTGGTGTCATAAGAGCATGTTCGGATAAGCTCACAGGTGAGGTATTGGCTTGCAAGTCTATTGCCAAAGATAGATTGGTCACACATGATGATGCGCGCAGCATCAAGCTCGAAATTGAAATAATGTCTAGGTTGTCTGGGCATCCGAATGTTGTGAGTCTCAAGGCAGTTTATGAGGATGAACATTATGTGCATTTGTTGATGGAATTATGTGCTGGAGGGGAGCTTTTTCACCGGCTCGAGAAGCAAGGCAGATACTCAGAAACTGATGCTCGGGTTCTTTTTAGGCATCTGATGCATGTTGTTAAGTATTGTCATGAGAAGGGAGTTGTTCATAGAGATTTGAAGCCGGAAAACATTCTTTTGGCCACAAAATCTTCATCCTCACCAATTAAGTTGGCAGATTTTGGTCTTGCAACCTACATTAAACCAGGGCAGAAATTGCATGGCACTGTTGGAAGTCCATTTTACATAGCCCCTGAGGTACTTTCAGGAGGTTATAACCAGTCTGCTGATGTGTGGAGTGCTGGAGTTATTCTTTACATTCTTCTTAGTGGAGTCCCTCCGTTTTGGGGAAAGACGAAATCAAGTATTTTTGACGCCGTTAGGGCCGCAGATCTGTGGTTCCCTCCTGGTCCTTGGGGTCACATATCTGCTTCTGCCAAGCAGTTGATTGCTGAAATGCTTTGTGTTGATCCTTCCAGGAGGCTCACAGCTGCTCAGGTTCTAGCTCACCCATGGATGGAAGACTGTGCGCAAGCACATGAAGAACTGTACAACCAAAACATCCGCGTCTTCAGACAGCTGCAACTGGATGAAGATTCATTCTCTCCTGTATCCGTTGACAGGAATCAGGACTTTAGCTTCGGTGAGGGTTCACCAACAACTGCTGGTGGGAAACTGTGGCACTCACCTGCATTCACATGCAAATCATCTTTCTCCTCTTTCCTAGATGAGAACGGTACTCCTTGCCCTGCATCTGGAGGCTTTTCTTTCAGCAGCTGTGCTTATGAATCAAGTGCAACTGAGTTTTCTTCACCAGTTCCATCAATGCCTAGCTTTACCTTCTTCAGTCCAAGTTCTGCAGAAGAGCAAGGAAACATTCCATTGAGATTTAAAGCCAAAATGTCAACTTGGGATCCAATTTGTGGAGAGCCAAATGTGGAGAAGCTACTTGAGCTGGAATGCTCACCAGCTAAGTGTGATGATGGAGAACTAGAACGCAAAGAGTTTCGGAGAGGAGGAACAAATGGGCTGTCTAGGGTTGCCGGAATTCACAGCAAAAGGAATCATACAATTGGACTTGGTGAGCTTGATCAGCTAAATCTCATTGTAACCGAATCAGTTATTCGTTGGGCATCATGCACTCATATTCCAACAGTTCCATCTCTTAGATTGTCACTTGTCTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04012 ko04020 ko04024 ko04066 ko04114 ko04217 ko04261 ko04310 ko04360 ko04713 ko04720 ko04722 ko04725 ko04728 ko04740 ko04745 ko04750 ko04911 ko04912 ko04916 ko04921 ko04922 ko04925 ko04934 ko04971 ko05031 ko05152 ko05200 ko05205 ko05214 map04012 map04020 map04024 map04066 map04114 map04217 map04261 map04310 map04360 map04713 map04720 map04722 map04725 map04728 map04740 map04745 map04750 map04911 map04912 map04916 map04921 map04922 map04925 map04934 map04971 map05031 map05152 map05200 map05205 map05214

Pfam Domains

Protein Families

Pkinase

Protein Analysis

522

Amino Acids

57.73

Weight (kDa)

6.15

Isoelectric Point (pI)

55.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	43 - 300	2.5e-73	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	44 - 294	1e-30	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002852)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12580
fragaria_vesca	FvH4_5g01410 FvH4_5g01410 FvH4_5g01410 FvH4_7g28910 FvH4_7g28910 FvH4_7g28910
malus_domestica	MD01G1195700.v1.1 MD04G1068700.v1.1 MD07G1262500.v1.1
prunus_persica	Prupe.2G289000_v2.0.a1 Prupe.5G089500_v2.0.a1 Prupe.5G089500_v2.0.a1
pyrus_communis	pycom01g20630 pycom04g06200 pycom07g24150
rosa_chinensis	RchiOBHm_Chr1g0376571 RchiOBHm_Chr7g0199461
rosa_laevigata	RLG00000003791 RLG00000026597
rosa_multiflora	Rmu_sc0001308.1_g000003 Rmu_sc0003890.1_g000006 Rmu_sc0005594.1_g000017
rosa_roxburghii	Rroxscaffold_3G00256710 Rroxscaffold_4G00281980
rosa_rugosa	Rorug01G0396500 Rorug07G0054100 Rorug07G0054200 Rorug07G0054200 Rorug07G0054300
rosa_samantha	Rh1AG412300 Rh1BG372700 Rh1CG386600 Rh1DG403600 Rh7AG179200 Rh7BG182600 Rh7DG182100
rosa_wichuraiana	Rw1G036210 Rw7G015740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	657
AarI	CACCTGC	1 cut(s)	1078
Acc16I	TGCGCA	1 cut(s)	912
Acc36I	ACCTGC	1 cut(s)	1078
AccB7I	CCANNNNNTGG	1 cut(s)	1304
AccI	GTMKAC	1 cut(s)	48
AccII	CGCG	2 cut(s)	253, 948
AciI	CCGC	2 cut(s)	768, 946
AclWI	GGATC	3 cut(s)	845, 1289, 1302
AcoI	YGGCCR	1 cut(s)	522
AcsI	RAATTY	2 cut(s)	109, 1428
AcuI	CTGAAG	2 cut(s)	937, 1210
AcyI	GRCGYC	1 cut(s)	756
AfaI	GTAC	3 cut(s)	642, 932, 1120
AfiI	CCNNNNNNNGG	5 cut(s)	728, 898, 1002, 1136, 1304
AgsI	TTSAA	5 cut(s)	39, 92, 115, 275, 502
AjnI	CCWGG	3 cut(s)	586, 787, 857
Alw26I	GTCTC	1 cut(s)	320
AlwI	GGATC	3 cut(s)	845, 1289, 1302
AlwNI	CAGNNNCTG	2 cut(s)	422, 1158
Ama87I	CYCGRG	2 cut(s)	395, 429
AoxI	GGCC	2 cut(s)	522, 765
ApeKI	GCWGC	5 cut(s)	31, 255, 872, 961, 1155
ApoI	RAATTY	2 cut(s)	109, 1428
ArsI	GACNNNNNNTTYG	4 cut(s)	1004, 1036, 1397, 1429
Asp700I	GAANNNNTTC	1 cut(s)	513
AspLEI	GCGC	3 cut(s)	253, 255, 913
AspS9I	GGNCC	2 cut(s)	765, 791
AvaI	CYCGRG	2 cut(s)	395, 429
AvaII	GGWCC	1 cut(s)	791
AxyI	CCTNAGG	1 cut(s)	636
BalI	TGGCCA	1 cut(s)	524
BamHI	GGATCC	1 cut(s)	1294
BbsI	GAAGAC	2 cut(s)	909, 943
BbvI	GCAGC	5 cut(s)	43, 267, 859, 948, 1167
BccI	CCATC	6 cut(s)	141, 352, 892, 1210, 1358, 1549
BceAI	ACGGC	1 cut(s)	743
BcgI	CGANNNNNNTGC	2 cut(s)	247, 281
BciT130I	CCWGG	3 cut(s)	588, 789, 859
BciVI	GTATCC	1 cut(s)	1003
BclI	TGATCA	1 cut(s)	1471
BcoDI	GTCTC	1 cut(s)	320
BfaI	CTAG	7 cut(s)	285, 884, 1106, 1212, 1373, 1416, 1567
BfmI	CTRYAG	2 cut(s)	49, 1239
BfuAI	ACCTGC	1 cut(s)	1078
BfuI	GTATCC	1 cut(s)	1003
BglI	GCCNNNNNGGC	1 cut(s)	764
BglII	AGATCT	1 cut(s)	772
BisI	GCNGC	6 cut(s)	32, 256, 768, 873, 962, 1156
BlsI	GCNGC	6 cut(s)	33, 257, 769, 874, 963, 1157
Bme1390I	CCNGG	3 cut(s)	588, 789, 859
Bme18I	GGWCC	1 cut(s)	791
BmeT110I	CYCGRG	2 cut(s)	395, 429
BmgT120I	GGNCC	2 cut(s)	765, 791
BmiI	GGNNCC	2 cut(s)	782, 1296
BmrFI	CCNGG	3 cut(s)	588, 789, 859
BmsI	GCATC	8 cut(s)	238, 267, 307, 415, 441, 454, 1142, 1523
BpiI	GAAGAC	2 cut(s)	909, 943
BpmI	CTGGAG	3 cut(s)	393, 705, 1158
Bpu10I	CCTNAGC	1 cut(s)	876
BpuEI	CTTGAG	2 cut(s)	302, 1352
BsaHI	GRCGYC	1 cut(s)	756
BsaJI	CCNNGG	3 cut(s)	587, 794, 893
Bsc4I	CCNNNNNNNGG	5 cut(s)	728, 898, 1002, 1136, 1304
Bse118I	RCCGGY	1 cut(s)	390
Bse1I	ACTGG	4 cut(s)	121, 661, 972, 1196
Bse21I	CCTNAGG	1 cut(s)	636
BseBI	CCWGG	3 cut(s)	588, 789, 859
BseDI	CCNNGG	3 cut(s)	587, 794, 893
BseGI	GGATG	7 cut(s)	152, 298, 340, 536, 903, 942, 976
BseLI	CCNNNNNNNGG	5 cut(s)	728, 898, 1002, 1136, 1304
BseMII	CTCAG	4 cut(s)	429, 627, 890, 1173
BseNI	ACTGG	4 cut(s)	121, 661, 972, 1196
BsePI	GCGCGC	1 cut(s)	251
BseRI	GAGGAG	2 cut(s)	1087, 1410
BseXI	GCAGC	5 cut(s)	43, 267, 859, 948, 1167
Bsh1236I	CGCG	2 cut(s)	253, 948
BshFI	GGCC	2 cut(s)	524, 767
BsiHKCI	CYCGRG	2 cut(s)	395, 429
BsiSI	CCGG	3 cut(s)	391, 506, 1425
BslFI	GGGAC	1 cut(s)	701
BslI	CCNNNNNNNGG	5 cut(s)	728, 898, 1002, 1136, 1304
BsmAI	GTCTC	1 cut(s)	320
BsmFI	GGGAC	1 cut(s)	701
BsmI	GAATGC	2 cut(s)	1073, 1346
BsnI	GGCC	2 cut(s)	524, 767
BsoBI	CYCGRG	2 cut(s)	395, 429
Bsp1407I	TGTACA	1 cut(s)	930
Bsp143I	GATC	4 cut(s)	772, 850, 1294, 1471
Bsp19I	CCATGG	1 cut(s)	893
BspACI	CCGC	2 cut(s)	768, 946
BspANI	GGCC	2 cut(s)	524, 767
BspCNI	CTCAG	4 cut(s)	428, 628, 889, 1174
BspFNI	CGCG	2 cut(s)	253, 948
BspHI	TCATGA	1 cut(s)	472
BspLI	GGNNCC	2 cut(s)	782, 1296
BspMAI	CTGCAG	1 cut(s)	1243
BspMI	ACCTGC	1 cut(s)	1078
BspPI	GGATC	3 cut(s)	845, 1289, 1302
BspQI	GCTCTTC	1 cut(s)	1239
BsrFI	RCCGGY	1 cut(s)	390
BsrGI	TGTACA	1 cut(s)	930
BsrI	ACTGG	4 cut(s)	121, 661, 972, 1196
BssAI	RCCGGY	1 cut(s)	390
BssECI	CCNNGG	3 cut(s)	587, 794, 893
BssHII	GCGCGC	1 cut(s)	251
BssMI	GATC	4 cut(s)	772, 850, 1294, 1471
BssNI	GRCGYC	1 cut(s)	756
BssT1I	CCWWGG	2 cut(s)	794, 893
Bst2UI	CCWGG	3 cut(s)	588, 789, 859
Bst4CI	ACNGT	7 cut(s)	53, 610, 908, 930, 1059, 1118, 1537
Bst6I	CTCTTC	1 cut(s)	1239
BstACI	GRCGYC	1 cut(s)	756
BstAPI	GCANNNNNTGC	2 cut(s)	451, 598
BstAUI	TGTACA	1 cut(s)	930
BstC8I	GCNNGC	3 cut(s)	208, 253, 915
BstDEI	CTNAG	7 cut(s)	415, 636, 707, 876, 1182, 1353, 1547
BstDSI	CCRYGG	1 cut(s)	893
BstF5I	GGATG	7 cut(s)	152, 298, 340, 536, 903, 942, 976
BstFNI	CGCG	2 cut(s)	253, 948
BstHHI	GCGC	3 cut(s)	253, 255, 913
BstKTI	GATC	4 cut(s)	775, 853, 1297, 1474
BstMAI	GTCTC	1 cut(s)	320
BstMBI	GATC	4 cut(s)	772, 850, 1294, 1471
BstMWI	GCNNNNNNNGC	6 cut(s)	400, 451, 598, 764, 1333, 1474
BstNI	CCWGG	3 cut(s)	588, 789, 859
BstNSI	RCATGY	3 cut(s)	177, 458, 1083
BstSCI	CCNGG	3 cut(s)	586, 787, 857
BstSFI	CTRYAG	2 cut(s)	49, 1239
BstUI	CGCG	2 cut(s)	253, 948
BstV1I	GCAGC	5 cut(s)	43, 267, 859, 948, 1167
BstV2I	GAAGAC	2 cut(s)	909, 943
BstX2I	RGATCY	2 cut(s)	772, 1294
BstYI	RGATCY	2 cut(s)	772, 1294
Bsu36I	CCTNAGG	1 cut(s)	636
BsuI	GTATCC	1 cut(s)	1003
BsuRI	GGCC	2 cut(s)	524, 767
BtgI	CCRYGG	1 cut(s)	893
BtsCI	GGATG	7 cut(s)	152, 298, 340, 536, 903, 942, 976
BtsIMutI	CAGTG	1 cut(s)	606
BveI	ACCTGC	1 cut(s)	1078
Cac8I	GCNNGC	3 cut(s)	208, 253, 915
CaiI	CAGNNNCTG	2 cut(s)	422, 1158
CciI	TCATGA	1 cut(s)	472
CfoI	GCGC	3 cut(s)	253, 255, 913
Cfr10I	RCCGGY	1 cut(s)	390
Cfr13I	GGNCC	2 cut(s)	765, 791
CseI	GACGC	2 cut(s)	764, 937
Csp6I	GTAC	3 cut(s)	641, 931, 1119
CspCI	CAANNNNNGTGG	2 cut(s)	84, 119
CviAII	CATG	9 cut(s)	174, 242, 455, 473, 602, 894, 920, 1080, 1518
CviQI	GTAC	3 cut(s)	641, 931, 1119
DdeI	CTNAG	7 cut(s)	415, 636, 707, 876, 1182, 1353, 1547
DpnI	GATC	4 cut(s)	774, 852, 1296, 1473
DpnII	GATC	4 cut(s)	772, 850, 1294, 1471
DraI	TTTAAA	1 cut(s)	1273
EaeI	YGGCCR	1 cut(s)	522
Eam1104I	CTCTTC	1 cut(s)	1239
EarI	CTCTTC	1 cut(s)	1239
Eco130I	CCWWGG	2 cut(s)	794, 893
Eco47I	GGWCC	1 cut(s)	791
Eco57I	CTGAAG	2 cut(s)	937, 1210
Eco81I	CCTNAGG	1 cut(s)	636
Eco88I	CYCGRG	2 cut(s)	395, 429
EcoRI	GAATTC	1 cut(s)	1428
EcoRII	CCWGG	3 cut(s)	586, 787, 857
EcoT14I	CCWWGG	2 cut(s)	794, 893
EcoT22I	ATGCAT	1 cut(s)	456
ErhI	CCWWGG	2 cut(s)	794, 893
FaeI	CATG	9 cut(s)	177, 245, 458, 476, 605, 897, 923, 1083, 1521
FaqI	GGGAC	1 cut(s)	701
FatI	CATG	9 cut(s)	173, 241, 454, 472, 601, 893, 919, 1079, 1517
FbaI	TGATCA	1 cut(s)	1471
FblI	GTMKAC	1 cut(s)	48
Fnu4HI	GCNGC	6 cut(s)	32, 256, 768, 873, 962, 1156
FokI	GGATG	7 cut(s)	159, 285, 347, 523, 910, 929, 983
Fsp4HI	GCNGC	6 cut(s)	32, 256, 768, 873, 962, 1156
FspBI	CTAG	7 cut(s)	285, 884, 1106, 1212, 1373, 1416, 1567
FspI	TGCGCA	1 cut(s)	912
GlaI	GCGC	3 cut(s)	252, 254, 912
GluI	GCNGC	6 cut(s)	32, 256, 768, 873, 962, 1156
GsuI	CTGGAG	3 cut(s)	393, 705, 1158
HaeIII	GGCC	2 cut(s)	524, 767
HapII	CCGG	3 cut(s)	391, 506, 1425
HgaI	GACGC	2 cut(s)	764, 937
HhaI	GCGC	3 cut(s)	253, 255, 913
Hin1I	GRCGYC	1 cut(s)	756
Hin1II	CATG	9 cut(s)	177, 245, 458, 476, 605, 897, 923, 1083, 1521
Hin6I	GCGC	3 cut(s)	251, 253, 911
HinP1I	GCGC	3 cut(s)	251, 253, 911
HincII	GTYRAC	2 cut(s)	1000, 1287
HindII	GTYRAC	2 cut(s)	1000, 1287
HinfI	GANTC	8 cut(s)	45, 313, 714, 977, 1006, 1169, 1444, 1496
HpaII	CCGG	3 cut(s)	391, 506, 1425
Hpy166II	GTNNAC	4 cut(s)	49, 1000, 1034, 1287
Hpy188I	TCNGA	6 cut(s)	181, 303, 418, 450, 956, 1392
Hpy188III	TCNNGA	6 cut(s)	89, 397, 473, 648, 1010, 1137
Hpy8I	GTNNAC	4 cut(s)	49, 1000, 1034, 1287
HpyAV	CCTTC	4 cut(s)	45, 472, 864, 1231
HpyCH4III	ACNGT	7 cut(s)	53, 610, 908, 930, 1059, 1118, 1537
HpyF10VI	GCNNNNNNNGC	6 cut(s)	400, 451, 598, 764, 1333, 1474
HpyF3I	CTNAG	7 cut(s)	415, 636, 707, 876, 1182, 1353, 1547
Hsp92I	GRCGYC	1 cut(s)	756
Hsp92II	CATG	9 cut(s)	177, 245, 458, 476, 605, 897, 923, 1083, 1521
HspAI	GCGC	3 cut(s)	251, 253, 911
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	4 cut(s)	772, 850, 1294, 1471
LguI	GCTCTTC	1 cut(s)	1239
LmnI	GCTCC	1 cut(s)	379
Lsp1109I	GCAGC	5 cut(s)	43, 267, 859, 948, 1167
LweI	GCATC	8 cut(s)	238, 267, 307, 415, 441, 454, 1142, 1523
MaeI	CTAG	7 cut(s)	285, 884, 1106, 1212, 1373, 1416, 1567
MaeIII	GTNAC	5 cut(s)	56, 235, 800, 1489, 1554
MalI	GATC	4 cut(s)	774, 852, 1296, 1473
MboI	GATC	4 cut(s)	772, 850, 1294, 1471
MboII	GAAGA	9 cut(s)	525, 695, 914, 935, 943, 986, 1182, 1216, 1256
MfeI	CAATTG	2 cut(s)	140, 1452
MflI	RGATCY	2 cut(s)	772, 1294
MlsI	TGGCCA	1 cut(s)	524
MluNI	TGGCCA	1 cut(s)	524
MlyI	GAGTC	3 cut(s)	54, 322, 723
MmeI	TCCRAC	2 cut(s)	592, 1556
Mox20I	TGGCCA	1 cut(s)	524
Mph1103I	ATGCAT	1 cut(s)	456
MroXI	GAANNNNTTC	1 cut(s)	513
MscI	TGGCCA	1 cut(s)	524
MseI	TTAA	4 cut(s)	462, 549, 582, 1272
MslI	CAYNNNNRTG	3 cut(s)	246, 303, 1078
Msp20I	TGGCCA	1 cut(s)	524
MspA1I	CMGCKG	3 cut(s)	872, 961, 1158
MspI	CCGG	3 cut(s)	391, 506, 1425
MspR9I	CCNGG	3 cut(s)	588, 789, 859
MunI	CAATTG	2 cut(s)	140, 1452
Mva1269I	GAATGC	2 cut(s)	1073, 1346
MvaI	CCWGG	3 cut(s)	588, 789, 859
MvnI	CGCG	2 cut(s)	253, 948
MwoI	GCNNNNNNNGC	6 cut(s)	400, 451, 598, 764, 1333, 1474
NcoI	CCATGG	1 cut(s)	893
NdeII	GATC	4 cut(s)	772, 850, 1294, 1471
NlaIII	CATG	9 cut(s)	177, 245, 458, 476, 605, 897, 923, 1083, 1521
NlaIV	GGNNCC	2 cut(s)	782, 1296
NmuCI	GTSAC	3 cut(s)	235, 800, 1554
NsbI	TGCGCA	1 cut(s)	912
NsiI	ATGCAT	1 cut(s)	456
NspI	RCATGY	3 cut(s)	177, 458, 1083
PaeR7I	CTCGAG	1 cut(s)	395
PagI	TCATGA	1 cut(s)	472
PaqCI	CACCTGC	1 cut(s)	1078
PauI	GCGCGC	1 cut(s)	251
PciSI	GCTCTTC	1 cut(s)	1239
PctI	GAATGC	2 cut(s)	1073, 1346
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	5 cut(s)	977, 1006, 1169, 1444, 1496
PflMI	CCANNNNNTGG	1 cut(s)	1304
PfoI	TCCNGGA	1 cut(s)	857
PkrI	GCNGC	6 cut(s)	33, 257, 769, 874, 963, 1157
PleI	GAGTC	3 cut(s)	53, 321, 722
PpsI	GAGTC	3 cut(s)	53, 321, 722
PsiI	TTATAA	1 cut(s)	657
Psp6I	CCWGG	3 cut(s)	586, 787, 857
PspGI	CCWGG	3 cut(s)	586, 787, 857
PspN4I	GGNNCC	2 cut(s)	782, 1296
PspPI	GGNCC	2 cut(s)	765, 791
PstI	CTGCAG	1 cut(s)	1243
PstNI	CAGNNNCTG	2 cut(s)	422, 1158
PsuI	RGATCY	2 cut(s)	772, 1294
PteI	GCGCGC	1 cut(s)	251
PvuII	CAGCTG	3 cut(s)	872, 961, 1158
RsaI	GTAC	3 cut(s)	642, 932, 1120
RsaNI	GTAC	3 cut(s)	641, 931, 1119
RseI	CAYNNNNRTG	3 cut(s)	246, 303, 1078
SapI	GCTCTTC	1 cut(s)	1239
SaqAI	TTAA	4 cut(s)	462, 549, 582, 1272
SatI	GCNGC	6 cut(s)	32, 256, 768, 873, 962, 1156
Sau3AI	GATC	4 cut(s)	772, 850, 1294, 1471
Sau96I	GGNCC	2 cut(s)	765, 791
SchI	GAGTC	3 cut(s)	54, 322, 723
ScrFI	CCNGG	3 cut(s)	588, 789, 859
SfaNI	GCATC	8 cut(s)	238, 267, 307, 415, 441, 454, 1142, 1523
SfcI	CTRYAG	2 cut(s)	49, 1239
Sfr274I	CTCGAG	1 cut(s)	395
SinI	GGWCC	1 cut(s)	791
SlaI	CTCGAG	1 cut(s)	395
SmiMI	CAYNNNNRTG	3 cut(s)	246, 303, 1078
SmlI	CTYRAG	3 cut(s)	317, 395, 1331
SmoI	CTYRAG	3 cut(s)	317, 395, 1331
SsiI	CCGC	2 cut(s)	768, 946
SspMI	CTAG	7 cut(s)	285, 884, 1106, 1212, 1373, 1416, 1567
StyD4I	CCNGG	3 cut(s)	586, 787, 857
StyI	CCWWGG	2 cut(s)	794, 893
TaaI	ACNGT	7 cut(s)	53, 610, 908, 930, 1059, 1118, 1537
TaqI	TCGA	4 cut(s)	21, 43, 267, 396
TatI	WGTACW	1 cut(s)	930
TauI	GCSGC	1 cut(s)	770
TfiI	GAWTC	5 cut(s)	977, 1006, 1169, 1444, 1496
Tru1I	TTAA	4 cut(s)	462, 549, 582, 1272
Tru9I	TTAA	4 cut(s)	462, 549, 582, 1272
TscAI	CASTG	1 cut(s)	613
TseFI	GTSAC	3 cut(s)	235, 800, 1554
TseI	GCWGC	5 cut(s)	31, 255, 872, 961, 1155
Tsp45I	GTSAC	3 cut(s)	235, 800, 1554
TspDTI	ATGAA	7 cut(s)	351, 479, 525, 936, 969, 987, 1182
TspGWI	ACGGA	2 cut(s)	711, 985
TspRI	CASTG	1 cut(s)	613
Van91I	CCANNNNNTGG	1 cut(s)	1304
VpaK11BI	GGWCC	1 cut(s)	791
XapI	RAATTY	2 cut(s)	109, 1428
XceI	RCATGY	3 cut(s)	177, 458, 1083
XcmI	CCANNNNNNNNNTGG	1 cut(s)	229
XhoI	CTCGAG	1 cut(s)	395
XmiI	GTMKAC	1 cut(s)	48
XmnI	GAANNNNTTC	1 cut(s)	513
XspI	CTAG	7 cut(s)	285, 884, 1106, 1212, 1373, 1416, 1567
Zsp2I	ATGCAT	1 cut(s)	456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.