Rorug07G0054100

Calcium-dependent protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0002852
Physical Location & Seq
Reverse (-)
3833198 .. 3838074
4877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0054100.1

Sequence Viewer

Length: 3531 bp
ATGGCGGTGGAAGATTTGTGCCCGCCATCTTCAGAAATTTGCACAGTACCGAATTCTGAGAGTCCTGAACCAGATGTGGAGCTGGGTTGTTCACGGAAAAAGAAGAAAAATAAGAAGAAAAGGTGTAAACTTGAAAGCAATGATAAGAGTTGTGAAAGTCCCTCCCTACAGTCTCAATTTGTACAACTCTCAGATCAAGAAGCACCACAACCACTTACAGAGAAAAGTAATACAATAACAGATTCAGAAAATCCCCAATCAAATGTGGAGCCGAGTCTTTCAACAAAAAAGAAGAAGAAGAAGAAGAAAGGGTCTAAAACCACTGAGACCAATGATACAAGTTGTGAAAGTCCCCCCCTACAGCCTCAACTTGTACAACTTTCAGATCAACAAGCATCACAACCACTTGCAGAGAAAATTACTACAATAACAGATTCAGAGAGTCCCCAGTCAAATGTGGAGCTGAGTCTTTCACAAAATAAGAAGAAGAAGAATAAGAAGAGGAAGAACAAGAAAGGGTGTAAAACCCCTGAGACAAATGATAAAAGTTGTGAAAGTCCCTCTATACAGCCTCAACTTGTACAAGCAACAGATCAAGAGGTAGAAGTGCCACAACGCATTGAGGCCGTACAGCCTCAACTTGCACAAGTGACGGATCAAAAGCTAGAAGTGCCACAACCCATTGAGGATTCGAGTTTCTCAGTGAAAAACAAGAAAAGGAATGGGAAGAAAAGCCGTAAACCCCATGACTGTAATGATGAAGTGTGTGGCGTTTCTGTTGGTACTTCTATTATGGAAAGTAATATGCCAGCAGTAGATCCATATATAAAGCCTTCTGTTGAAATATCATTGGAGCAGCTTGTTGCGGAGCCACTTGTGGAGGGAATGAGTACAACAGCAAACTCAAAAAGTCCCAAATCCAATGCAGATTTTGGCTGCTCACAAGAAATGAAGAAAAAGAAGCGGAAGAGAAGCCACAAAACCAGTGAGTATAAAGAGCTATTTGTGGAAACAATGATGCCAGAAGCAAATCCATCTTTTCAGCCTTCAATTGCAATGTTCTCTGAACAAGAACTAGAGGTGTCACAACCACTTAATGTTGATGCAGAATCACTTGTGGAGGGAATGAGCACAACAATAAACTCAGAAAGGCCCAGGCCGAATGCAGATTTTAACTGCTCACAAGAAACAAAGAAGAAAAAGCGAAAGAGAGGGCGCAAAACCAGTGATAGTAAAGAGGTATTAGTGGAACCAATGTTGCCAGAAGCAGAATCATCTCTTCGGCCTTCTCTTACAATGTTATCTGAGCAAGAACTAGATGTGCCACAACCACTTAATGCTGATGCAGAACCACTTGTGGAGGGAATGAGCACAACAATAAAGTCGGAAAGTACCAGGGGCAATGCAGATTTTACCTGCTCACAAGAAACAAAAAAGAAAAAGCGAAAGAGAGGGAGCAAAACCAGTGACAGTAAAGAGCTATTAGTGGAAGTAGTGACGCCGGAAGCAGATCCATCTCTCCAGCCTCTGCTTGCAATATTTTCTGAACATGAGCTAGAGGTGCCACCACCGCTTACTACTGATGCAGAACCACTTGTGGAGGGAATGAGCATGACAATGAACTCAGAAAGTCTAAAGCCCAATGCAGATATTAGCTGCTTAGAAGAAACGAAGAAGAAAAATTCAAAGAGAAAGCCCAAAACCAGTGAAAGTAAAAAGCTATCTGTGGAAATAATGACGCCGGAACCAGATCCATCTCTCCAGCCTACTCTTTCTGAAAAAGAGCTAGGGGTGCCACAACCACTTAATACTGATGCAGAACCACTTGTGGAGGGAATGAGCACGACGATGAACTCGGGAAGTCCCAAGCCCAATGCAGATTTTAGCTACCCACAAGAAACAAAGAAGAAAAATCGAAAGAGAAAGCACAAAACCAGTGAAAGTAAAGAGCTATTAGTTGAAATAATGGCACCGGAAGCAGATCCATCTCTTCAGCCTACTCTTTCTGAAAAAGAACTACAGGTGCCACCACCCCTTAATACTGATGCAGAACCACTTGTGGAGGGAATGAGCACAACAATAAACTTGGAAAGTACCAGGGGCAATGCAGATTTTACCTGCTCACAAGAAACAAAAAAGAAAAAGCAAAAGAGAGGGAGCAAAACCAGTGAACGTAAAGAGCTCTTAGTGGAAATAATGACGCCAGAAGCAGATCCATCTCTTCAGCGTACTCTTTTTGAAAAAGAGCCAGAGGTTCCACAACCACTTAATACTGATGCAGAACCACTCATGGAGGGAATGAGCACAACAATGAACTCAGGAAGTCCCAAGCCCAATGCAGATGTTAGCTGCTCACAAGAAACGAAGAAAAAAAATCCAAAGAGAAAGCGCAAAACCTGTGAAAGTAAAGAGCTATTAGTGGAAATAATGACGCCAGAAGCAGATCCATCTCTTCAGCCTTCGCTTGCAATAATCTCTGAACAAGAGGTAGAGGTGCCACAGCCACTTAATACTGATGCACAACCACTTGTGGAGGGAGTAAGCACAACAAACTCGGAGAGTCCCAAGCCCAATGCAGAATTTAGTTGCTCACAAGAAACGAAGAAAAAGAATCCAAAGAGAAATCACAAAACCAATGAGAATAAAGAGCTATTGGTGGAAATAATGACGCCAGAAGCAGATCTATCCCTTCAGCCTCCGCTTGCAATATTCTCTGAACAAGAGGTAGAGGTGGCACAACCACTTAATACTGGTACAGTGTGGAAAGAAACCAAGATTGATGAAGTTCCTTCCTTGTCACATTTGGCTCCAAAAGCTGAAACTGAAGTAGTTGCTATCGGTAGAGAGGGCAATCTTTCTCAGAAAAAGCTTCTGATTCTTGATATTAATGGGCTGCTTGCTGATATTGTCCAGATGGAAGTTTCTATCCCCAGTAGTTTTAAACCAGACAAAATAATATCACGGAAAGCAGTTTTTAAGAGGCCATTTTGCGATGATTTTCTACAGTTCTGCTTTGACAGATTTAATGTGGGTGTGTGGTCTTCAAGAACCAAGGAAAATGTGAACTCGGTGATAGATTTTCTTTTGGGGGATTCCAAACACAAATTACTCTTTTGCTGGAACCAATCGCACTGCACTTCTACCAGGTTCAAGACAGTGGAGAACAAGAATAAGCCCCTCGTTTTGAAAGAGCTTAGAAAATTATGGGAGAAGCTTGAGCCTGATCTTCCTTGGGCGAGAGGAGAGTATAACGAATCCAACACAGTATTATTGGATGATTCTCCATACAAGGCTTTGTGCAATCCGGTGAACACGGCCATATTCCCCAATTCATATCAGTTCAGGAACAGAAAAGATTCTTCATTAGGACCTGGAGGCGATATCCGTTCTTACCTGGAAGGGTTAGCTATGGCTGAGAGTGTCCAAAAATATGTGGAACAGAATCCATTTGGTCAGCGACCCATAACGAAATCAAATCCTTCTTGGAACTTCTATAGGAGAGTTATAGAGGATGCAAAACCCCTGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04012 ko04020 ko04024 ko04066 ko04114 ko04217 ko04261 ko04310 ko04360 ko04713 ko04720 ko04722 ko04725 ko04728 ko04740 ko04745 ko04750 ko04911 ko04912 ko04916 ko04921 ko04922 ko04925 ko04934 ko04971 ko05031 ko05152 ko05200 ko05205 ko05214 map04012 map04020 map04024 map04066 map04114 map04217 map04261 map04310 map04360 map04713 map04720 map04722 map04725 map04728 map04740 map04745 map04750 map04911 map04912 map04916 map04921 map04922 map04925 map04934 map04971 map05031 map05152 map05200 map05205 map05214
Pfam Domains
Protein Families
Pkinase

Protein Analysis

1176

Amino Acids

131.15

Weight (kDa)

5.99

Isoelectric Point (pI)

60.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NIF PF03031 956 - 1141 2e-18 NLI interacting factor-like phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1424, 2126
AccB1I GGYRCC 5 cut(s) 1561, 1792, 1969, 2023, 2494
AciI CCGC 6 cut(s) 5, 23, 866, 964, 1571, 2699
AclWI GGATC 7 cut(s) 663, 812, 1505, 1745, 1976, 2207, 2438
AcoI YGGCCR 1 cut(s) 3315
AcsI RAATTY 4 cut(s) 36, 52, 1681, 2579
AcuI CTGAAG 6 cut(s) 15, 1976, 2207, 2438, 2675, 2844
AcyI GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
AjnI CCWGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
Alw21I GWGCWC 6 cut(s) 1133, 1373, 1844, 2075, 2184, 2306
Alw26I GTCTC 3 cut(s) 177, 320, 527
AlwI GGATC 7 cut(s) 663, 812, 1505, 1745, 1976, 2207, 2438
AlwNI CAGNNNCTG 1 cut(s) 1528
Ama87I CYCGRG 1 cut(s) 1855
AoxI GGCC 6 cut(s) 624, 1151, 1157, 1283, 2981, 3315
ApeKI GCWGC 5 cut(s) 856, 936, 1656, 2349, 2893
ApoI RAATTY 4 cut(s) 36, 52, 1681, 2579
AseI ATTAAT 1 cut(s) 2886
Asp700I GAANNNNTTC 1 cut(s) 3355
AspLEI GCGC 2 cut(s) 1218, 2391
AspS9I GGNCC 2 cut(s) 1152, 3368
AsuHPI GGTGA 2 cut(s) 3082, 3319
AvaI CYCGRG 1 cut(s) 1855
AvaII GGWCC 1 cut(s) 3368
BaeGI GKGCMC 1 cut(s) 23
BanI GGYRCC 5 cut(s) 1561, 1792, 1969, 2023, 2494
BanII GRGCYC 1 cut(s) 2184
BbsI GAAGAC 1 cut(s) 3033
Bbv12I GWGCWC 6 cut(s) 1133, 1373, 1844, 2075, 2184, 2306
BbvI GCAGC 5 cut(s) 868, 923, 1643, 2336, 2880
BccI CCATC 8 cut(s) 34, 1042, 1522, 1762, 1993, 2224, 2455, 2908
BceAI ACGGC 3 cut(s) 611, 720, 3330
BciT130I CCWGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
BcoDI GTCTC 3 cut(s) 177, 320, 527
BfaI CTAG 5 cut(s) 665, 1076, 1316, 1556, 1787
BfmI CTRYAG 5 cut(s) 167, 359, 2018, 3002, 3493
BfuAI ACCTGC 2 cut(s) 1424, 2126
BglII AGATCT 1 cut(s) 2680
BisI GCNGC 5 cut(s) 857, 937, 1657, 2350, 2894
BlsI GCNGC 5 cut(s) 858, 938, 1658, 2351, 2895
Bme1390I CCNGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
Bme18I GGWCC 1 cut(s) 3368
BmeT110I CYCGRG 1 cut(s) 1855
BmgT120I GGNCC 2 cut(s) 1152, 3368
BmrFI CCNGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
BmrI ACTGGG 2 cut(s) 442, 2925
BmuI ACTGGG 2 cut(s) 442, 2925
BpiI GAAGAC 1 cut(s) 3033
BpmI CTGGAG 3 cut(s) 1505, 1745, 3393
BpuEI CTTGAG 1 cut(s) 3236
BsaHI GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
BsaI GGTCTC 1 cut(s) 320
BsaJI CCNNGG 5 cut(s) 1154, 1395, 2097, 3051, 3230
BsaWI WCCGGW 2 cut(s) 1972, 3304
Bse1I ACTGG 9 cut(s) 448, 984, 1224, 1464, 1704, 1935, 2166, 2755, 2931
Bse3DI GCAATG 4 cut(s) 145, 1062, 1408, 2110
BseBI CCWGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
BseDI CCNNGG 5 cut(s) 1154, 1395, 2097, 3051, 3230
BseGI GGATG 2 cut(s) 3280, 3517
BseMI GCAATG 4 cut(s) 145, 1062, 1408, 2110
BseNI ACTGG 9 cut(s) 448, 984, 1224, 1464, 1704, 1935, 2166, 2755, 2931
BseRI GAGGAG 1 cut(s) 3255
BseSI GKGCMC 1 cut(s) 23
BseXI GCAGC 5 cut(s) 868, 923, 1643, 2336, 2880
BseYI CCCAGC 1 cut(s) 82
BsgI GTGCAG 1 cut(s) 3118
BshFI GGCC 6 cut(s) 626, 1153, 1159, 1285, 2983, 3317
BshNI GGYRCC 5 cut(s) 1561, 1792, 1969, 2023, 2494
BsiHKAI GWGCWC 6 cut(s) 1133, 1373, 1844, 2075, 2184, 2306
BsiHKCI CYCGRG 1 cut(s) 1855
BsiSI CCGG 4 cut(s) 1502, 1742, 1973, 3305
BslFI GGGAC 8 cut(s) 144, 336, 429, 543, 897, 1848, 2310, 2547
BsmAI GTCTC 3 cut(s) 177, 320, 527
BsmFI GGGAC 8 cut(s) 144, 336, 429, 543, 897, 1848, 2310, 2547
BsmI GAATGC 1 cut(s) 1168
BsnI GGCC 6 cut(s) 626, 1153, 1159, 1285, 2983, 3317
Bso31I GGTCTC 1 cut(s) 320
BsoBI CYCGRG 1 cut(s) 1855
Bsp1286I GDGCHC 7 cut(s) 23, 1133, 1373, 1844, 2075, 2184, 2306
Bsp1407I TGTACA 3 cut(s) 181, 373, 580
BspACI CCGC 6 cut(s) 5, 23, 866, 964, 1571, 2699
BspANI GGCC 6 cut(s) 626, 1153, 1159, 1285, 2983, 3317
BspMI ACCTGC 2 cut(s) 1424, 2126
BspPI GGATC 7 cut(s) 663, 812, 1505, 1745, 1976, 2207, 2438
BspT107I GGYRCC 5 cut(s) 1561, 1792, 1969, 2023, 2494
BspTNI GGTCTC 1 cut(s) 320
BsrDI GCAATG 4 cut(s) 145, 1062, 1408, 2110
BsrGI TGTACA 3 cut(s) 181, 373, 580
BsrI ACTGG 9 cut(s) 448, 984, 1224, 1464, 1704, 1935, 2166, 2755, 2931
BssECI CCNNGG 5 cut(s) 1154, 1395, 2097, 3051, 3230
BssNI GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
BssT1I CCWWGG 2 cut(s) 3051, 3230
Bst2UI CCWGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
Bst4CI ACNGT 8 cut(s) 46, 171, 752, 1472, 2758, 3006, 3157, 3265
Bst6I CTCTTC 6 cut(s) 494, 962, 1284, 1995, 2226, 2457
BstACI GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
BstAUI TGTACA 3 cut(s) 181, 373, 580
BstC8I GCNNGC 6 cut(s) 23, 810, 1533, 2466, 2703, 2898
BstF5I GGATG 2 cut(s) 3280, 3517
BstHHI GCGC 2 cut(s) 1218, 2391
BstMAI GTCTC 3 cut(s) 177, 320, 527
BstMWI GCNNNNNNNGC 6 cut(s) 670, 1561, 1570, 1792, 1976, 2813
BstNI CCWGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
BstSCI CCNGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
BstSFI CTRYAG 5 cut(s) 167, 359, 2018, 3002, 3493
BstSLI GKGCMC 1 cut(s) 23
BstV1I GCAGC 5 cut(s) 868, 923, 1643, 2336, 2880
BstV2I GAAGAC 1 cut(s) 3033
BstX2I RGATCY 7 cut(s) 817, 1510, 1750, 1981, 2212, 2443, 2680
BstYI RGATCY 7 cut(s) 817, 1510, 1750, 1981, 2212, 2443, 2680
BsuRI GGCC 6 cut(s) 626, 1153, 1159, 1285, 2983, 3317
BtgZI GCGATG 1 cut(s) 3006
BtsCI GGATG 2 cut(s) 3280, 3517
BtsI GCAGTG 1 cut(s) 3130
BveI ACCTGC 2 cut(s) 1424, 2126
Cac8I GCNNGC 6 cut(s) 23, 810, 1533, 2466, 2703, 2898
CaiI CAGNNNCTG 1 cut(s) 1528
CfoI GCGC 2 cut(s) 1218, 2391
Cfr13I GGNCC 2 cut(s) 1152, 3368
CseI GACGC 5 cut(s) 1507, 1747, 2209, 2440, 2677
CsiI ACCWGGT 1 cut(s) 3143
CviAII CATG 4 cut(s) 746, 1550, 1612, 2290
DraI TTTAAA 1 cut(s) 2941
EaeI YGGCCR 1 cut(s) 3315
Eam1104I CTCTTC 6 cut(s) 494, 962, 1284, 1995, 2226, 2457
EarI CTCTTC 6 cut(s) 494, 962, 1284, 1995, 2226, 2457
Ecl136II GAGCTC 1 cut(s) 2182
Eco130I CCWWGG 2 cut(s) 3051, 3230
Eco24I GRGCYC 1 cut(s) 2184
Eco31I GGTCTC 1 cut(s) 320
Eco32I GATATC 1 cut(s) 3382
Eco47I GGWCC 1 cut(s) 3368
Eco53kI GAGCTC 1 cut(s) 2182
Eco57I CTGAAG 6 cut(s) 15, 1976, 2207, 2438, 2675, 2844
Eco88I CYCGRG 1 cut(s) 1855
EcoICRI GAGCTC 1 cut(s) 2182
EcoO109I RGGNCCY 1 cut(s) 3368
EcoRI GAATTC 1 cut(s) 52
EcoRII CCWGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
EcoRV GATATC 1 cut(s) 3382
EcoT14I CCWWGG 2 cut(s) 3051, 3230
EcoT38I GRGCYC 1 cut(s) 2184
ErhI CCWWGG 2 cut(s) 3051, 3230
FaeI CATG 4 cut(s) 749, 1553, 1615, 2293
FaqI GGGAC 8 cut(s) 144, 336, 429, 543, 897, 1848, 2310, 2547
FatI CATG 4 cut(s) 745, 1549, 1611, 2289
FauI CCCGC 1 cut(s) 30
Fnu4HI GCNGC 5 cut(s) 857, 937, 1657, 2350, 2894
FokI GGATG 2 cut(s) 3287, 3524
FriOI GRGCYC 1 cut(s) 2184
Fsp4HI GCNGC 5 cut(s) 857, 937, 1657, 2350, 2894
FspBI CTAG 5 cut(s) 665, 1076, 1316, 1556, 1787
GlaI GCGC 2 cut(s) 1217, 2390
GluI GCNGC 5 cut(s) 857, 937, 1657, 2350, 2894
GsaI CCCAGC 1 cut(s) 86
GsuI CTGGAG 3 cut(s) 1505, 1745, 3393
HaeIII GGCC 6 cut(s) 626, 1153, 1159, 1285, 2983, 3317
HapII CCGG 4 cut(s) 1502, 1742, 1973, 3305
HgaI GACGC 5 cut(s) 1507, 1747, 2209, 2440, 2677
HhaI GCGC 2 cut(s) 1218, 2391
Hin1I GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
Hin1II CATG 4 cut(s) 749, 1553, 1615, 2293
Hin6I GCGC 2 cut(s) 1216, 2389
HinP1I GCGC 2 cut(s) 1216, 2389
HindIII AAGCTT 2 cut(s) 2867, 3212
HpaII CCGG 4 cut(s) 1502, 1742, 1973, 3305
HphI GGTGA 2 cut(s) 3082, 3319
Hpy166II GTNNAC 6 cut(s) 92, 128, 740, 2171, 3064, 3310
Hpy8I GTNNAC 6 cut(s) 92, 128, 740, 2171, 3064, 3310
Hpy99I CGWCG 1 cut(s) 1849
HpyAV CCTTC 8 cut(s) 843, 1056, 1296, 2469, 2699, 2799, 3392, 3489
HpyCH4III ACNGT 8 cut(s) 46, 171, 752, 1472, 2758, 3006, 3157, 3265
HpyCH4IV ACGT 1 cut(s) 2173
HpyF10VI GCNNNNNNNGC 6 cut(s) 670, 1561, 1570, 1792, 1976, 2813
HpySE526I ACGT 1 cut(s) 2173
Hsp92I GRCGYC 5 cut(s) 1499, 1739, 2201, 2432, 2669
Hsp92II CATG 4 cut(s) 749, 1553, 1615, 2293
HspAI GCGC 2 cut(s) 1216, 2389
LmnI GCTCC 8 cut(s) 79, 268, 460, 853, 868, 1455, 2157, 2812
Lsp1109I GCAGC 5 cut(s) 868, 923, 1643, 2336, 2880
MabI ACCWGGT 1 cut(s) 3143
MaeI CTAG 5 cut(s) 665, 1076, 1316, 1556, 1787
MaeII ACGT 1 cut(s) 2173
MaeIII GTNAC 5 cut(s) 649, 1083, 1466, 1495, 2796
MfeI CAATTG 1 cut(s) 1050
MflI RGATCY 7 cut(s) 817, 1510, 1750, 1981, 2212, 2443, 2680
MhlI GDGCHC 7 cut(s) 23, 1133, 1373, 1844, 2075, 2184, 2306
MlyI GAGTC 5 cut(s) 70, 283, 451, 475, 2569
MmeI TCCRAC 2 cut(s) 1365, 3282
MroXI GAANNNNTTC 1 cut(s) 3355
MslI CAYNNNNRTG 3 cut(s) 1616, 1847, 2309
MspI CCGG 4 cut(s) 1502, 1742, 1973, 3305
MspR9I CCNGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
MunI CAATTG 1 cut(s) 1050
Mva1269I GAATGC 1 cut(s) 1168
MvaI CCWGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
MwoI GCNNNNNNNGC 6 cut(s) 670, 1561, 1570, 1792, 1976, 2813
NlaIII CATG 4 cut(s) 749, 1553, 1615, 2293
NmeAIII GCCGAG 1 cut(s) 297
NmuCI GTSAC 5 cut(s) 649, 1083, 1466, 1495, 2796
PctI GAATGC 1 cut(s) 1168
PdmI GAANNNNTTC 1 cut(s) 3355
PkrI GCNGC 5 cut(s) 858, 938, 1658, 2351, 2895
PleI GAGTC 5 cut(s) 69, 282, 450, 474, 2568
PpsI GAGTC 5 cut(s) 69, 282, 450, 474, 2568
PpuMI RGGWCCY 1 cut(s) 3368
PshBI ATTAAT 1 cut(s) 2886
Psp124BI GAGCTC 1 cut(s) 2184
Psp5II RGGWCCY 1 cut(s) 3368
Psp6I CCWGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
PspFI CCCAGC 1 cut(s) 82
PspGI CCWGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
PspPI GGNCC 2 cut(s) 1152, 3368
PspPPI RGGWCCY 1 cut(s) 3368
PstNI CAGNNNCTG 1 cut(s) 1528
PsuI RGATCY 7 cut(s) 817, 1510, 1750, 1981, 2212, 2443, 2680
RseI CAYNNNNRTG 3 cut(s) 1616, 1847, 2309
SacI GAGCTC 1 cut(s) 2184
SatI GCNGC 5 cut(s) 857, 937, 1657, 2350, 2894
Sau96I GGNCC 2 cut(s) 1152, 3368
SchI GAGTC 5 cut(s) 70, 283, 451, 475, 2569
ScrFI CCNGG 6 cut(s) 1156, 1396, 2098, 3145, 3372, 3395
SduI GDGCHC 7 cut(s) 23, 1133, 1373, 1844, 2075, 2184, 2306
SexAI ACCWGGT 1 cut(s) 3143
SfcI CTRYAG 5 cut(s) 167, 359, 2018, 3002, 3493
SinI GGWCC 1 cut(s) 3368
SmiMI CAYNNNNRTG 3 cut(s) 1616, 1847, 2309
SmlI CTYRAG 1 cut(s) 3215
SmoI CTYRAG 1 cut(s) 3215
SsiI CCGC 6 cut(s) 5, 23, 866, 964, 1571, 2699
SspI AATATT 2 cut(s) 1539, 2709
SspMI CTAG 5 cut(s) 665, 1076, 1316, 1556, 1787
SstI GAGCTC 1 cut(s) 2184
StyD4I CCNGG 6 cut(s) 1154, 1394, 2096, 3143, 3370, 3393
StyI CCWWGG 2 cut(s) 3051, 3230
TaaI ACNGT 8 cut(s) 46, 171, 752, 1472, 2758, 3006, 3157, 3265
TaiI ACGT 1 cut(s) 2176
TaqI TCGA 2 cut(s) 692, 1915
TatI WGTACW 4 cut(s) 181, 373, 580, 890
TseFI GTSAC 5 cut(s) 649, 1083, 1466, 1495, 2796
TseI GCWGC 5 cut(s) 856, 936, 1656, 2349, 2893
Tsp45I GTSAC 5 cut(s) 649, 1083, 1466, 1495, 2796
TspDTI ATGAA 8 cut(s) 774, 965, 1634, 1865, 2327, 2796, 3321, 3351
TspGWI ACGGA 4 cut(s) 109, 668, 2977, 3374
VpaK11BI GGWCC 1 cut(s) 3368
VspI ATTAAT 1 cut(s) 2886
XapI RAATTY 4 cut(s) 36, 52, 1681, 2579
XmnI GAANNNNTTC 1 cut(s) 3355
XspI CTAG 5 cut(s) 665, 1076, 1316, 1556, 1787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.