MD07G1265200.v1.1

Protein of unknown function (DUF4005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0009886
Physical Location & Seq
Forward (+)
33386661 .. 33390642
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1265200.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGGGATTTTTCCGGCGACTCTTCGGCCCCAAACGGCCCAAAAACAACCCGTCTCCGACGAACAAGCACACCACTAAGGAAAAGAGTCAAAAGACTACTACTTCTGGGTCTAACAAGCACAAGCCCGGCGCCTCCACGTCATCACCTGCTGCTCAGGAATGGGCGGGCCTGGACGCCAACGAGCATGCCATAGCCGTAGCAGCCGCTACGGCCGCAGTCGCTGAGGCTGCTCTCGCGGCGGCTCATGCGGCGGCTGAGGTCGTCCGCCTCACTAATGGCGCTCCACCAGGGACCTCCTCGCAAGTCAGCCTTCCCACGGCGGCGCCTTCAACCGTCCGCCGCCATCTCGCCGCAGTGAAGATACAGTCGACTTTCCGGCGATATCTGGCAAGAAGGGCCCTAAGAGCACTCAAATCACTAGTGAAGCTTCAAGCTTTGGTGAGAGGCCACATTGTGAGAAAGCAATCGGCAGACATGCTCAGGCGTATGCAGACACTGGTTCGAGTCCAAGCCCGAGCGCGCGCAACTCGATCGCTCATGTCTGAATCACTACATTCTAGCAGCAAATCCTTCCTATCGTATCACCCGCTGCCAGAAAGCCCTGACAAAATTGGACACCAGCACCGCGTATATAGCAGCAAATTTGACGGGCCCTCGATACTGCAGAGATGCGGTTCAAATTCAAAGGTAGACAGAAGACGGCTGGCGTCAGGTTGGTTAGACCAGTGGATGGAAGAAAGTGCACGCCGAGATGGTTCACTGAGATATGAGCACTCAGATGATATGAAGGTTGACAAAGTTCTTGAAGTAGATACTTGGAAGCCTCACTTGGGGTCCCAACGTAGACCCCAGACCTTTCAAACAGCACATCGCGTTCTGTCTTCAGATCATTACAACCCAAGCTTTATGACATATGACTCTCCATCAAAACGCTCGACAAAAGGATCAAACTTCAATCGAAATCAAGCTCCTATCGATGTTGTTTCACTGCCATCTCTGAAATATCCCTTGGCAACGGATGAAGCAGCTTTTAGGACCACCGAGAACAGCCCACAAGCATTTTCTGCCTCCTCTAGACCTGGAACCAGTGGTAGAAGATGTCATCCCTTCACGCCGGCAAGGAGTGAGTGCTCGTGGGGTTTCTTTAATGGGTATGCCGGTTGCCCTAACTACATGGCTAACACGGAATCATTCCGCGCAAAGGTCAGGTCACAAAGTGCCCCTAGGCAAAGGCTTGAGTTTGATAAATATGGTTTGACCAAGAAGTCTGTTCCGGAGTTTTGGGATGCAGGAACTTATTCAGATACGAGTTTTGCTGAGGATGGTGACCTCCGAAATAGAGCCTTTTTCAGCCCTAGCCGCCTGAATCGAGTCGGAAGCTCCAATCCACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4005 IQ

Protein Analysis

465

Amino Acids

51.45

Weight (kDa)

10.48

Isoelectric Point (pI)

62.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4005 PF13178 364 - 412 7.3e-12 Protein of unknown function (DUF4005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 154
AasI GACNNNNNNGTC 1 cut(s) 1264
Acc36I ACCTGC 1 cut(s) 154
AccB1I GGYRCC 2 cut(s) 128, 322
AccB7I CCANNNNNTGG 1 cut(s) 730
AccI GTMKAC 3 cut(s) 368, 690, 844
AccII CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
AccIII TCCGGA 1 cut(s) 1273
AclWI GGATC 1 cut(s) 952
AcoI YGGCCR 1 cut(s) 210
AcsI RAATTY 2 cut(s) 641, 679
AcuI CTGAAG 1 cut(s) 867
AcyI GRCGYC 4 cut(s) 129, 174, 323, 707
AdeI CACNNNGTG 2 cut(s) 454, 1217
AfiI CCNNNNNNNGG 5 cut(s) 316, 730, 830, 1201, 1389
AgsI TTSAA 7 cut(s) 330, 431, 678, 684, 806, 860, 955
AhlI ACTAGT 1 cut(s) 418
AjiI CACGTC 1 cut(s) 138
AjnI CCWGG 3 cut(s) 168, 286, 1078
AjuI GAANNNNNNNTTGG 4 cut(s) 812, 844, 992, 1024
AluBI AGCT 6 cut(s) 427, 434, 903, 968, 1028, 1380
AluI AGCT 6 cut(s) 427, 434, 903, 968, 1028, 1380
Alw21I GWGCWC 4 cut(s) 409, 745, 774, 1133
Alw26I GTCTC 1 cut(s) 57
Alw44I GTGCAC 1 cut(s) 741
AlwI GGATC 1 cut(s) 952
AlwNI CAGNNNCTG 2 cut(s) 221, 496
Ama87I CYCGRG 1 cut(s) 513
Aor13HI TCCGGA 1 cut(s) 1273
AoxI GGCC 7 cut(s) 25, 35, 166, 210, 396, 445, 650
ApaI GGGCCC 2 cut(s) 400, 654
ApaLI GTGCAC 1 cut(s) 741
ApeKI GCWGC 7 cut(s) 149, 200, 227, 561, 589, 636, 1025
ApoI RAATTY 2 cut(s) 641, 679
ArsI GACNNNNNNTTYG 2 cut(s) 1193, 1225
Asp700I GAANNNNTTC 1 cut(s) 1297
AspA2I CCTAGG 1 cut(s) 1223
AspLEI GCGC 7 cut(s) 131, 281, 325, 520, 522, 524, 1199
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 4 cut(s) 135, 451, 575, 1337
AvaI CYCGRG 1 cut(s) 513
AvaII GGWCC 3 cut(s) 291, 834, 1035
AvrII CCTAGG 1 cut(s) 1223
BaeGI GKGCMC 4 cut(s) 400, 654, 745, 1222
BanI GGYRCC 2 cut(s) 128, 322
BanII GRGCYC 2 cut(s) 400, 654
BauI CACGAG 1 cut(s) 1132
BbsI GAAGAC 2 cut(s) 703, 873
Bbv12I GWGCWC 4 cut(s) 409, 745, 774, 1133
BbvCI CCTCAGC 3 cut(s) 222, 255, 1317
BbvI GCAGC 7 cut(s) 136, 212, 214, 573, 576, 648, 1037
BccI CCATC 6 cut(s) 351, 724, 746, 931, 1000, 1316
BceAI ACGGC 5 cut(s) 50, 179, 225, 333, 716
BcgI CGANNNNNNTGC 2 cut(s) 513, 547
BciT130I CCWGG 3 cut(s) 170, 288, 1080
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 57
BcuI ACTAGT 1 cut(s) 418
BfaI CTAG 5 cut(s) 419, 558, 1074, 1224, 1356
BfmI CTRYAG 1 cut(s) 662
BfoI RGCGCY 3 cut(s) 132, 282, 326
BfuAI ACCTGC 1 cut(s) 154
BglI GCCNNNNNGGC 1 cut(s) 209
BlnI CCTAGG 1 cut(s) 1223
Bme1390I CCNGG 4 cut(s) 126, 170, 288, 1080
Bme18I GGWCC 3 cut(s) 291, 834, 1035
BmeT110I CYCGRG 1 cut(s) 513
BmgBI CACGTC 1 cut(s) 138
BmiI GGNNCC 9 cut(s) 28, 130, 292, 324, 398, 652, 835, 836, 1084
BmrFI CCNGG 4 cut(s) 126, 170, 288, 1080
BmsI GCATC 2 cut(s) 659, 1276
BpiI GAAGAC 2 cut(s) 703, 873
Bpu10I CCTNAGC 5 cut(s) 153, 222, 255, 479, 1317
BpuEI CTTGAG 1 cut(s) 1256
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 1 cut(s) 975
BsaHI GRCGYC 4 cut(s) 129, 174, 323, 707
BsaJI CCNNGG 5 cut(s) 287, 315, 1008, 1223, 1388
BsaWI WCCGGW 1 cut(s) 1273
Bsc4I CCNNNNNNNGG 5 cut(s) 316, 730, 830, 1201, 1389
Bse118I RCCGGY 2 cut(s) 1114, 1157
Bse1I ACTGG 3 cut(s) 501, 724, 1086
BseAI TCCGGA 1 cut(s) 1273
BseBI CCWGG 3 cut(s) 170, 288, 1080
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 5 cut(s) 287, 315, 1008, 1223, 1388
BseGI GGATG 5 cut(s) 735, 1024, 1102, 1291, 1327
BseLI CCNNNNNNNGG 5 cut(s) 316, 730, 830, 1201, 1389
BseMII CTCAG 7 cut(s) 167, 213, 246, 493, 752, 789, 1308
BseNI ACTGG 3 cut(s) 501, 724, 1086
BsePI GCGCGC 2 cut(s) 518, 520
BseRI GAGGAG 2 cut(s) 286, 1060
BseSI GKGCMC 4 cut(s) 400, 654, 745, 1222
BseX3I CGGCCG 1 cut(s) 210
BseXI GCAGC 7 cut(s) 136, 212, 214, 573, 576, 648, 1037
Bsh1236I CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
Bsh1285I CGRYCG 2 cut(s) 213, 533
BshFI GGCC 7 cut(s) 27, 37, 168, 212, 398, 447, 652
BshNI GGYRCC 2 cut(s) 128, 322
BshVI ATCGAT 1 cut(s) 975
BsiEI CGRYCG 2 cut(s) 213, 533
BsiHKAI GWGCWC 4 cut(s) 409, 745, 774, 1133
BsiHKCI CYCGRG 1 cut(s) 513
BsiSI CCGG 6 cut(s) 13, 126, 376, 1115, 1158, 1274
BslFI GGGAC 2 cut(s) 304, 820
BslI CCNNNNNNNGG 5 cut(s) 316, 730, 830, 1201, 1389
BsmAI GTCTC 1 cut(s) 57
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 2 cut(s) 304, 820
BsnI GGCC 7 cut(s) 27, 37, 168, 212, 398, 447, 652
BsoBI CYCGRG 1 cut(s) 513
Bsp120I GGGCCC 2 cut(s) 396, 650
Bsp1286I GDGCHC 7 cut(s) 400, 409, 654, 745, 774, 1133, 1222
Bsp13I TCCGGA 1 cut(s) 1273
Bsp143I GATC 3 cut(s) 530, 886, 944
BspANI GGCC 7 cut(s) 27, 37, 168, 212, 398, 447, 652
BspCNI CTCAG 7 cut(s) 166, 214, 247, 492, 753, 788, 1309
BspDI ATCGAT 1 cut(s) 975
BspEI TCCGGA 1 cut(s) 1273
BspFNI CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
BspLI GGNNCC 9 cut(s) 28, 130, 292, 324, 398, 652, 835, 836, 1084
BspMAI CTGCAG 1 cut(s) 666
BspMI ACCTGC 1 cut(s) 154
BspPI GGATC 1 cut(s) 952
BspT107I GGYRCC 2 cut(s) 128, 322
BsrFI RCCGGY 2 cut(s) 1114, 1157
BsrI ACTGG 3 cut(s) 501, 724, 1086
BssAI RCCGGY 2 cut(s) 1114, 1157
BssECI CCNNGG 5 cut(s) 287, 315, 1008, 1223, 1388
BssHII GCGCGC 2 cut(s) 518, 520
BssMI GATC 3 cut(s) 530, 886, 944
BssNI GRCGYC 4 cut(s) 129, 174, 323, 707
BssSI CACGAG 1 cut(s) 1132
BssT1I CCWWGG 2 cut(s) 1008, 1223
Bst2BI CACGAG 1 cut(s) 1132
Bst2UI CCWGG 3 cut(s) 170, 288, 1080
Bst4CI ACNGT 3 cut(s) 334, 366, 1392
Bst6I CTCTTC 1 cut(s) 26
BstACI GRCGYC 4 cut(s) 129, 174, 323, 707
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstC8I GCNNGC 7 cut(s) 166, 186, 520, 522, 705, 745, 1116
BstDEI CTNAG 9 cut(s) 75, 153, 222, 255, 401, 479, 761, 775, 1317
BstDSI CCRYGG 2 cut(s) 315, 1388
BstEII GGTNACC 1 cut(s) 1325
BstF5I GGATG 5 cut(s) 735, 1024, 1102, 1291, 1327
BstFNI CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
BstH2I RGCGCY 3 cut(s) 132, 282, 326
BstHHI GCGC 7 cut(s) 131, 281, 325, 520, 522, 524, 1199
BstKTI GATC 3 cut(s) 533, 889, 947
BstMAI GTCTC 1 cut(s) 57
BstMBI GATC 3 cut(s) 530, 886, 944
BstMCI CGRYCG 2 cut(s) 213, 533
BstNI CCWGG 3 cut(s) 170, 288, 1080
BstNSI RCATGY 2 cut(s) 188, 478
BstPI GGTNACC 1 cut(s) 1325
BstSCI CCNGG 4 cut(s) 124, 168, 286, 1078
BstSFI CTRYAG 1 cut(s) 662
BstSLI GKGCMC 4 cut(s) 400, 654, 745, 1222
BstUI CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
BstV1I GCAGC 7 cut(s) 136, 212, 214, 573, 576, 648, 1037
BstV2I GAAGAC 2 cut(s) 703, 873
BstZI CGGCCG 1 cut(s) 210
Bsu15I ATCGAT 1 cut(s) 975
BsuRI GGCC 7 cut(s) 27, 37, 168, 212, 398, 447, 652
BsuTUI ATCGAT 1 cut(s) 975
BtgI CCRYGG 2 cut(s) 315, 1388
BtgZI GCGATG 1 cut(s) 854
BtrI CACGTC 1 cut(s) 138
BtsCI GGATG 5 cut(s) 735, 1024, 1102, 1291, 1327
BtsI GCAGTG 2 cut(s) 360, 986
BtsIMutI CAGTG 6 cut(s) 360, 494, 731, 758, 986, 1093
BveI ACCTGC 1 cut(s) 154
Cac8I GCNNGC 7 cut(s) 166, 186, 520, 522, 705, 745, 1116
CaiI CAGNNNCTG 2 cut(s) 221, 496
CfoI GCGC 7 cut(s) 131, 281, 325, 520, 522, 524, 1199
Cfr10I RCCGGY 2 cut(s) 1114, 1157
ClaI ATCGAT 1 cut(s) 975
CseI GACGC 2 cut(s) 182, 696
CviAII CATG 5 cut(s) 185, 245, 475, 538, 1174
DdeI CTNAG 9 cut(s) 75, 153, 222, 255, 401, 479, 761, 775, 1317
DinI GGCGCC 2 cut(s) 130, 324
DpnI GATC 3 cut(s) 532, 888, 946
DpnII GATC 3 cut(s) 530, 886, 944
DraIII CACNNNGTG 2 cut(s) 454, 1217
DrdI GACNNNNNNGTC 1 cut(s) 1264
DseDI GACNNNNNNGTC 1 cut(s) 1264
EaeI YGGCCR 1 cut(s) 210
EagI CGGCCG 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 26
EarI CTCTTC 1 cut(s) 26
EciI GGCGGA 2 cut(s) 254, 326
EclXI CGGCCG 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 1008, 1223
Eco24I GRGCYC 2 cut(s) 400, 654
Eco32I GATATC 1 cut(s) 383
Eco47I GGWCC 3 cut(s) 291, 834, 1035
Eco52I CGGCCG 1 cut(s) 210
Eco57I CTGAAG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 513
Eco91I GGTNACC 1 cut(s) 1325
EcoO109I RGGNCCY 5 cut(s) 291, 396, 397, 651, 834
EcoO65I GGTNACC 1 cut(s) 1325
EcoRII CCWGG 3 cut(s) 168, 286, 1078
EcoRV GATATC 1 cut(s) 383
EcoT14I CCWWGG 2 cut(s) 1008, 1223
EcoT38I GRGCYC 2 cut(s) 400, 654
EgeI GGCGCC 2 cut(s) 130, 324
EheI GGCGCC 2 cut(s) 130, 324
ErhI CCWWGG 2 cut(s) 1008, 1223
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 5 cut(s) 188, 248, 478, 541, 1177
FalI AAGNNNNNCTT 4 cut(s) 294, 326, 812, 844
FaqI GGGAC 2 cut(s) 304, 820
FatI CATG 5 cut(s) 184, 244, 474, 537, 1173
FauI CCCGC 2 cut(s) 157, 594
FauNDI CATATG 1 cut(s) 913
FblI GTMKAC 3 cut(s) 368, 690, 844
FokI GGATG 5 cut(s) 742, 1031, 1089, 1298, 1334
FriOI GRGCYC 2 cut(s) 400, 654
FspBI CTAG 5 cut(s) 419, 558, 1074, 1224, 1356
GlaI GCGC 7 cut(s) 130, 280, 324, 519, 521, 523, 1198
HaeII RGCGCY 3 cut(s) 132, 282, 326
HaeIII GGCC 7 cut(s) 27, 37, 168, 212, 398, 447, 652
HapII CCGG 6 cut(s) 13, 126, 376, 1115, 1158, 1274
HgaI GACGC 2 cut(s) 182, 696
HhaI GCGC 7 cut(s) 131, 281, 325, 520, 522, 524, 1199
Hin1I GRCGYC 4 cut(s) 129, 174, 323, 707
Hin1II CATG 5 cut(s) 188, 248, 478, 541, 1177
Hin6I GCGC 7 cut(s) 129, 279, 323, 518, 520, 522, 1197
HinP1I GCGC 7 cut(s) 129, 279, 323, 518, 520, 522, 1197
HincII GTYRAC 2 cut(s) 369, 793
HindII GTYRAC 2 cut(s) 369, 793
HindIII AAGCTT 3 cut(s) 425, 432, 901
HinfI GANTC 8 cut(s) 18, 85, 504, 545, 917, 1187, 1366, 1371
HpaII CCGG 6 cut(s) 13, 126, 376, 1115, 1158, 1274
HphI GGTGA 4 cut(s) 135, 451, 575, 1337
Hpy166II GTNNAC 6 cut(s) 369, 691, 743, 758, 793, 845
Hpy188I TCNGA 8 cut(s) 57, 544, 778, 886, 999, 1303, 1334, 1376
Hpy188III TCNNGA 4 cut(s) 155, 803, 1074, 1274
Hpy8I GTNNAC 6 cut(s) 369, 691, 743, 758, 793, 845
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 6 cut(s) 320, 336, 387, 580, 781, 1117
HpyCH4III ACNGT 3 cut(s) 334, 366, 1392
HpyCH4IV ACGT 2 cut(s) 137, 841
HpyCH4V TGCA 4 cut(s) 490, 664, 743, 1289
HpyF3I CTNAG 9 cut(s) 75, 153, 222, 255, 401, 479, 761, 775, 1317
HpySE526I ACGT 2 cut(s) 137, 841
Hsp92I GRCGYC 4 cut(s) 129, 174, 323, 707
Hsp92II CATG 5 cut(s) 188, 248, 478, 541, 1177
HspAI GCGC 7 cut(s) 129, 279, 323, 518, 520, 522, 1197
KasI GGCGCC 2 cut(s) 128, 322
KflI GGGWCCC 1 cut(s) 834
Kpn2I TCCGGA 1 cut(s) 1273
KroI GCCGGC 1 cut(s) 1114
KroNI GCCGGC 1 cut(s) 1116
Kzo9I GATC 3 cut(s) 530, 886, 944
LmnI GCTCC 3 cut(s) 286, 973, 1385
Lsp1109I GCAGC 7 cut(s) 136, 212, 214, 573, 576, 648, 1037
LweI GCATC 2 cut(s) 659, 1276
MaeI CTAG 5 cut(s) 419, 558, 1074, 1224, 1356
MaeII ACGT 2 cut(s) 137, 841
MaeIII GTNAC 2 cut(s) 1209, 1325
MalI GATC 3 cut(s) 532, 888, 946
MboI GATC 3 cut(s) 530, 886, 944
MboII GAAGA 6 cut(s) 13, 370, 708, 746, 873, 1107
MhlI GDGCHC 7 cut(s) 400, 409, 654, 745, 774, 1133, 1222
MluCI AATT 3 cut(s) 609, 641, 679
Mly113I GGCGCC 2 cut(s) 129, 323
MlyI GAGTC 5 cut(s) 12, 94, 513, 911, 1380
MmeI TCCRAC 2 cut(s) 80, 1354
MroI TCCGGA 1 cut(s) 1273
MroNI GCCGGC 1 cut(s) 1114
MroXI GAANNNNTTC 1 cut(s) 1297
MseI TTAA 1 cut(s) 1146
MslI CAYNNNNRTG 1 cut(s) 777
MspA1I CMGCKG 1 cut(s) 589
MspI CCGG 6 cut(s) 13, 126, 376, 1115, 1158, 1274
MspR9I CCNGG 4 cut(s) 126, 170, 288, 1080
MvaI CCWGG 3 cut(s) 170, 288, 1080
MvnI CGCG 6 cut(s) 236, 520, 522, 627, 873, 1197
NaeI GCCGGC 1 cut(s) 1116
NarI GGCGCC 2 cut(s) 129, 323
NciI CCSGG 1 cut(s) 126
NdeI CATATG 1 cut(s) 913
NdeII GATC 3 cut(s) 530, 886, 944
NgoMIV GCCGGC 1 cut(s) 1114
NlaIII CATG 5 cut(s) 188, 248, 478, 541, 1177
NlaIV GGNNCC 9 cut(s) 28, 130, 292, 324, 398, 652, 835, 836, 1084
NmeAIII GCCGAG 1 cut(s) 773
NmuCI GTSAC 2 cut(s) 1209, 1325
NspI RCATGY 2 cut(s) 188, 478
PaeI GCATGC 1 cut(s) 188
PaqCI CACCTGC 1 cut(s) 154
PauI GCGCGC 2 cut(s) 518, 520
PdiI GCCGGC 1 cut(s) 1116
PdmI GAANNNNTTC 1 cut(s) 1297
PfeI GAWTC 3 cut(s) 545, 1187, 1366
PflMI CCANNNNNTGG 1 cut(s) 730
Ple19I CGATCG 1 cut(s) 533
PleI GAGTC 5 cut(s) 12, 93, 512, 911, 1379
PluTI GGCGCC 2 cut(s) 132, 326
PpsI GAGTC 5 cut(s) 12, 93, 512, 911, 1379
PpuMI RGGWCCY 2 cut(s) 291, 834
Psp5II RGGWCCY 2 cut(s) 291, 834
Psp6I CCWGG 3 cut(s) 168, 286, 1078
PspEI GGTNACC 1 cut(s) 1325
PspGI CCWGG 3 cut(s) 168, 286, 1078
PspN4I GGNNCC 9 cut(s) 28, 130, 292, 324, 398, 652, 835, 836, 1084
PspOMI GGGCCC 2 cut(s) 396, 650
PspPPI RGGWCCY 2 cut(s) 291, 834
PstI CTGCAG 1 cut(s) 666
PstNI CAGNNNCTG 2 cut(s) 221, 496
PteI GCGCGC 2 cut(s) 518, 520
PvuI CGATCG 1 cut(s) 533
RseI CAYNNNNRTG 1 cut(s) 777
SalI GTCGAC 1 cut(s) 367
SaqAI TTAA 1 cut(s) 1146
Sau3AI GATC 3 cut(s) 530, 886, 944
SchI GAGTC 5 cut(s) 12, 94, 513, 911, 1380
ScrFI CCNGG 4 cut(s) 126, 170, 288, 1080
SduI GDGCHC 7 cut(s) 400, 409, 654, 745, 774, 1133, 1222
SfaNI GCATC 2 cut(s) 659, 1276
SfcI CTRYAG 1 cut(s) 662
SfoI GGCGCC 2 cut(s) 130, 324
SinI GGWCC 3 cut(s) 291, 834, 1035
SmiMI CAYNNNNRTG 1 cut(s) 777
SmlI CTYRAG 1 cut(s) 1235
SmoI CTYRAG 1 cut(s) 1235
SpeI ACTAGT 1 cut(s) 418
SphI GCATGC 1 cut(s) 188
Sse9I AATT 3 cut(s) 609, 641, 679
SspDI GGCGCC 2 cut(s) 128, 322
SspMI CTAG 5 cut(s) 419, 558, 1074, 1224, 1356
StyD4I CCNGG 4 cut(s) 124, 168, 286, 1078
StyI CCWWGG 2 cut(s) 1008, 1223
TaaI ACNGT 3 cut(s) 334, 366, 1392
TaiI ACGT 2 cut(s) 140, 844
TaqI TCGA 8 cut(s) 368, 502, 529, 656, 935, 958, 975, 1369
TasI AATT 3 cut(s) 609, 641, 679
TfiI GAWTC 3 cut(s) 545, 1187, 1366
Tru1I TTAA 1 cut(s) 1146
Tru9I TTAA 1 cut(s) 1146
TscAI CASTG 6 cut(s) 360, 501, 731, 765, 993, 1093
TseFI GTSAC 2 cut(s) 1209, 1325
TseI GCWGC 7 cut(s) 149, 200, 227, 561, 589, 636, 1025
Tsp45I GTSAC 2 cut(s) 1209, 1325
TspDTI ATGAA 2 cut(s) 800, 1035
TspGWI ACGGA 2 cut(s) 1031, 1199
TspRI CASTG 6 cut(s) 360, 501, 731, 765, 993, 1093
Van91I CCANNNNNTGG 1 cut(s) 730
VneI GTGCAC 1 cut(s) 741
VpaK11BI GGWCC 3 cut(s) 291, 834, 1035
XapI RAATTY 2 cut(s) 641, 679
XbaI TCTAGA 1 cut(s) 1073
XceI RCATGY 2 cut(s) 188, 478
XmaJI CCTAGG 1 cut(s) 1223
XmiI GTMKAC 3 cut(s) 368, 690, 844
XmnI GAANNNNTTC 1 cut(s) 1297
XspI CTAG 5 cut(s) 419, 558, 1074, 1224, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.