Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0011502

Physical Location & Seq

Genomic Coordinates Forward (+)

4072669 .. 4074916

Gene Structure 2248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1051400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCTCTCCTTCACCCTTTAGTCTCACACATCTTCCCCTCTTCCACTCCCAAACCATCAACACCAAAACTAAAATCAAACCCTACACCTCTTCAACCATCCACATTAGTACTAACAAATAATAAGAGTCGTGATAACATCTCGGGTGTAGGTAAGTTTCTCTCCAGAGCCGTAGTTGCATCTCCGCTTGATCATGACGATGATTTGAAGGAAGATGAACAAGAGGATCACAAGGTTTTGGTGACTCCTTCCAAAGAAGAAGAGCATGGAGAAGAAAGCGTCGCAACCGGATACAATTGGACGGAAGAATGGTACCCTCTTTACCTCACCCAGGACCTGCCTGAGGATGCACCTTTAGGCCTTACCGTCTTCAATAAGCAGCTCGTCTTGTATCGTGATGGCTCGGGCGAGCTTCGCTGTTACGAAGATCGTTGCCCACATAGGCTGGCAAAACTATCCGAAGGCCATTTGATCGACGGAAGGCTAGAGTGTTTGTACCATGGTTGGCAATTCGAACGCCAAGGAAAATGTGTAAAGATTCCACAGGTATCTTGTGTTAAATCATATGAAGTGAGGGATTCTCAAGGCGTTGTTTGGGTGTGGATGTCTCACAAGACACCACCAAACACCAAAAAACTACCTTGGTTCGAAAACTTTGATAAACCCGGCTTTGATTATTCTTCGACAATCCACGAGCTCCCCTACGATCACTCCATTCTTCTGGAGAACCTCATGGATCCAGCCCACATTCCAATCTCACACGACAGGACAGGTTTCTCAGCGAAAAGAGAGAACGCGCAGCCACTGAGATTTGAGGTGATTGAAAGCAGTGACAGAGGTTTTGCAGGGTATTATGGTGAGGCAAAAGACCAGCACTTGCCTTTTTTCTTAAGGTTTGAGGCACCCGGCGTTATCGAAAACAGGAGGGAAATTGTAGACAAGAACGGTGAGAAGCACTACTCTGTCGGGCTCTTCCTCTGTAGACCAACGGGGCAGGGAAAATCCGTGGCTATTATGAGGTTCGGAGCCACGAAACTCTCCCCGTTGGCAAAACTGTTTCCGACTTGGTACTTCCACCACATTTCTTGTACAGTTTTCGAGCAAGACATGGGATTTCTCTCGTCTCAGAACGAAATACTTTCGAGAGAAAAACGTCCCACGAAAGAGTTGTACCTTAATTTAAAATCATCTGATGTTTGGGTGGCAGAGTACAGAAAATGGGTTGACAGAGTTAGCAATGGCATGCCTTACCATGTAGGTCACAGCACTATATCGTTGCCCGAAGAGGCGGCCGTGGTGGAACATGCACCGGCAGGGCTTGTTGCCAGTGTTTCAGCGTCTCAGCCGGCTAAGGGAGGCGTTGGAACGATGCATGTTCCGAATTGGAGCAACCGATATTTTAGGCATGTGATTCATTGCAAAGGGTGTAGAAATGTTGTGAAGAGTTTTCGGGTTTTGAAAACCGGACTTTTGGGAGTTGCTGCTGTGATGGTTTTGGTTGCGATTTTGGTGTCCGGGAGGCAGTGGAAGGCGGTTTTTTTGGTGGCGGCTGCTGTGTTTTCGGCTGGGGCTTATGGTTGCTCAGCCGCTGTTGCATTGAGTACTACTAACTTCATAAGGTTGCACAAGAGGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

546

Amino Acids

61.26

Weight (kDa)

8.21

Isoelectric Point (pI)

44.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	103 - 190	1.1e-26	Rieske [2Fe-2S] domain
PaO	PF08417	299 - 385	7e-20	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24820
fragaria_vesca	FvH4_2g41330
malus_domestica	MD08G1051400.v1.1
prunus_persica	Prupe.1G397100_v2.0.a1 Prupe.1G397200_v2.0.a1 Prupe.1G397200_v2.0.a1 Prupe.1G397200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0299151
rosa_laevigata	RLG00000011459 RLG00000028023
rosa_multiflora	Rmu_sc0001434.1_g000017
rosa_roxburghii	Rroxscaffold_4G00298790 Rroxscaffold_7G00168970
rosa_rugosa	Rorug06G0285700 Rorug06G0285800
rosa_samantha	Rh6AG396700 Rh6BG405200 Rh6CG411200 Rh6DG397900
rosa_wichuraiana	Rw6G034730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	345
Acc65I	GGTACC	1 cut(s)	312
AccB1I	GGYRCC	2 cut(s)	312, 901
AccI	GTMKAC	2 cut(s)	936, 982
AccII	CGCG	1 cut(s)	797
AciI	CCGC	5 cut(s)	185, 1289, 1532, 1547, 1587
AclWI	GGATC	3 cut(s)	234, 731, 744
AcoI	YGGCCR	1 cut(s)	1290
AfaI	GTAC	8 cut(s)	111, 314, 497, 1070, 1090, 1172, 1211, 1603
AfiI	CCNNNNNNNGG	3 cut(s)	331, 343, 1352
AflII	CTTAAG	1 cut(s)	889
AgsI	TTSAA	5 cut(s)	95, 208, 373, 824, 1459
AjnI	CCWGG	1 cut(s)	330
AluBI	AGCT	3 cut(s)	382, 412, 697
AluI	AGCT	3 cut(s)	382, 412, 697
Alw21I	GWGCWC	1 cut(s)	699
Alw26I	GTCTC	4 cut(s)	28, 612, 1128, 1344
AlwI	GGATC	3 cut(s)	234, 731, 744
AlwNI	CAGNNNCTG	3 cut(s)	337, 805, 1589
Ama87I	CYCGRG	2 cut(s)	142, 403
AoxI	GGCC	3 cut(s)	358, 463, 1290
ApeKI	GCWGC	4 cut(s)	379, 799, 1481, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	824, 856
Asp718I	GGTACC	1 cut(s)	312
AspLEI	GCGC	1 cut(s)	799
AspS9I	GGNCC	1 cut(s)	334
AsuC2I	CCSGG	3 cut(s)	666, 906, 1516
AsuHPI	GGTGA	6 cut(s)	5, 253, 319, 829, 869, 959
AsuII	TTCGAA	2 cut(s)	513, 648
AvaI	CYCGRG	2 cut(s)	142, 403
AvaII	GGWCC	1 cut(s)	334
AxyI	CCTNAGG	1 cut(s)	342
BamHI	GGATCC	1 cut(s)	736
BanI	GGYRCC	2 cut(s)	312, 901
BanII	GRGCYC	2 cut(s)	699, 972
BauI	CACGAG	1 cut(s)	692
BbsI	GAAGAC	1 cut(s)	361
Bbv12I	GWGCWC	1 cut(s)	699
BbvI	GCAGC	4 cut(s)	391, 811, 1468, 1537
BccI	CCATC	4 cut(s)	64, 106, 392, 1483
BceAI	ACGGC	2 cut(s)	155, 1277
BciT130I	CCWGG	1 cut(s)	332
BciVI	GTATCC	1 cut(s)	284
BclI	TGATCA	1 cut(s)	190
BcnI	CCSGG	3 cut(s)	666, 906, 1516
BcoDI	GTCTC	4 cut(s)	28, 612, 1128, 1344
BfaI	CTAG	1 cut(s)	485
BfmI	CTRYAG	1 cut(s)	979
BfrI	CTTAAG	1 cut(s)	889
BfuAI	ACCTGC	1 cut(s)	345
BfuI	GTATCC	1 cut(s)	284
BisI	GCNGC	7 cut(s)	380, 800, 1290, 1482, 1548, 1551, 1587
BlpI	GCTNAGC	1 cut(s)	1582
BlsI	GCNGC	7 cut(s)	381, 801, 1291, 1483, 1549, 1552, 1588
BmcAI	AGTACT	2 cut(s)	111, 1603
Bme1390I	CCNGG	4 cut(s)	332, 666, 906, 1516
Bme18I	GGWCC	1 cut(s)	334
BmeT110I	CYCGRG	2 cut(s)	142, 403
BmgT120I	GGNCC	1 cut(s)	334
BmiI	GGNNCC	4 cut(s)	314, 738, 903, 1027
BmrFI	CCNGG	4 cut(s)	332, 666, 906, 1516
BmsI	GCATC	3 cut(s)	188, 337, 1359
BpiI	GAAGAC	1 cut(s)	361
BplI	GAGNNNNNCTC	2 cut(s)	565, 597
BpmI	CTGGAG	2 cut(s)	148, 743
Bpu10I	CCTNAGC	1 cut(s)	1350
Bpu1102I	GCTNAGC	1 cut(s)	1582
Bpu14I	TTCGAA	2 cut(s)	513, 648
BpuEI	CTTGAG	1 cut(s)	567
BpuMI	CCSGG	3 cut(s)	666, 906, 1516
BsaJI	CCNNGG	6 cut(s)	330, 499, 520, 641, 1005, 1293
BsaWI	WCCGGW	2 cut(s)	287, 1463
BsaXI	ACNNNNNCTCC	2 cut(s)	695, 725
Bsc4I	CCNNNNNNNGG	3 cut(s)	331, 343, 1352
Bse118I	RCCGGY	2 cut(s)	1309, 1345
Bse1I	ACTGG	1 cut(s)	1326
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	2 cut(s)	1243, 1414
BseBI	CCWGG	1 cut(s)	332
BseDI	CCNNGG	6 cut(s)	330, 499, 520, 641, 1005, 1293
BseGI	GGATG	3 cut(s)	98, 352, 609
BseLI	CCNNNNNNNGG	3 cut(s)	331, 343, 1352
BseMI	GCAATG	2 cut(s)	1243, 1414
BseMII	CTCAG	6 cut(s)	333, 792, 797, 1139, 1355, 1596
BseNI	ACTGG	1 cut(s)	1326
BseX3I	CGGCCG	1 cut(s)	1290
BseXI	GCAGC	4 cut(s)	391, 811, 1468, 1537
BseYI	CCCAGC	1 cut(s)	1565
Bsh1236I	CGCG	1 cut(s)	797
Bsh1285I	CGRYCG	1 cut(s)	1293
BshFI	GGCC	3 cut(s)	360, 465, 1292
BshNI	GGYRCC	2 cut(s)	312, 901
BsiEI	CGRYCG	1 cut(s)	1293
BsiHKAI	GWGCWC	1 cut(s)	699
BsiHKCI	CYCGRG	2 cut(s)	142, 403
BsiSI	CCGG	7 cut(s)	288, 666, 906, 1310, 1346, 1464, 1515
BslFI	GGGAC	1 cut(s)	1140
BslI	CCNNNNNNNGG	3 cut(s)	331, 343, 1352
BsmAI	GTCTC	4 cut(s)	28, 612, 1128, 1344
BsmBI	CGTCTC	2 cut(s)	1128, 1344
BsmFI	GGGAC	1 cut(s)	1140
BsnI	GGCC	3 cut(s)	360, 465, 1292
BsoBI	CYCGRG	2 cut(s)	142, 403
Bsp119I	TTCGAA	2 cut(s)	513, 648
Bsp1286I	GDGCHC	2 cut(s)	699, 972
Bsp1407I	TGTACA	1 cut(s)	1088
Bsp143I	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
Bsp1720I	GCTNAGC	1 cut(s)	1582
Bsp19I	CCATGG	1 cut(s)	499
BspACI	CCGC	5 cut(s)	185, 1289, 1532, 1547, 1587
BspANI	GGCC	3 cut(s)	360, 465, 1292
BspCNI	CTCAG	6 cut(s)	334, 791, 798, 1138, 1354, 1595
BspFNI	CGCG	1 cut(s)	797
BspHI	TCATGA	1 cut(s)	193
BspLI	GGNNCC	4 cut(s)	314, 738, 903, 1027
BspMI	ACCTGC	1 cut(s)	345
BspPI	GGATC	3 cut(s)	234, 731, 744
BspQI	GCTCTTC	2 cut(s)	255, 977
BspT104I	TTCGAA	2 cut(s)	513, 648
BspT107I	GGYRCC	2 cut(s)	312, 901
BspTI	CTTAAG	1 cut(s)	889
BsrDI	GCAATG	2 cut(s)	1243, 1414
BsrFI	RCCGGY	2 cut(s)	1309, 1345
BsrGI	TGTACA	1 cut(s)	1088
BsrI	ACTGG	1 cut(s)	1326
BssAI	RCCGGY	2 cut(s)	1309, 1345
BssECI	CCNNGG	6 cut(s)	330, 499, 520, 641, 1005, 1293
BssMI	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
BssSI	CACGAG	1 cut(s)	692
BssT1I	CCWWGG	3 cut(s)	499, 520, 641
Bst2BI	CACGAG	1 cut(s)	692
Bst2UI	CCWGG	1 cut(s)	332
Bst4CI	ACNGT	4 cut(s)	367, 947, 1056, 1093
Bst6I	CTCTTC	6 cut(s)	46, 96, 255, 977, 1278, 1436
BstAFI	CTTAAG	1 cut(s)	889
BstAUI	TGTACA	1 cut(s)	1088
BstBI	TTCGAA	2 cut(s)	513, 648
BstC8I	GCNNGC	4 cut(s)	410, 447, 1244, 1347
BstDEI	CTNAG	7 cut(s)	342, 778, 806, 1125, 1341, 1350, 1582
BstDSI	CCRYGG	3 cut(s)	499, 1005, 1293
BstENI	CCTNNNNNAGG	2 cut(s)	329, 341
BstF5I	GGATG	3 cut(s)	98, 352, 609
BstFNI	CGCG	1 cut(s)	797
BstHHI	GCGC	1 cut(s)	799
BstKTI	GATC	6 cut(s)	193, 229, 430, 474, 709, 739
BstMAI	GTCTC	4 cut(s)	28, 612, 1128, 1344
BstMBI	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
BstMCI	CGRYCG	1 cut(s)	1293
BstMWI	GCNNNNNNNGC	3 cut(s)	176, 414, 1592
BstNI	CCWGG	1 cut(s)	332
BstNSI	RCATGY	4 cut(s)	1246, 1307, 1376, 1409
BstSCI	CCNGG	4 cut(s)	330, 664, 904, 1514
BstSFI	CTRYAG	1 cut(s)	979
BstUI	CGCG	1 cut(s)	797
BstV1I	GCAGC	4 cut(s)	391, 811, 1468, 1537
BstV2I	GAAGAC	1 cut(s)	361
BstX2I	RGATCY	1 cut(s)	736
BstXI	CCANNNNNNTGG	1 cut(s)	721
BstYI	RGATCY	1 cut(s)	736
BstZI	CGGCCG	1 cut(s)	1290
Bsu36I	CCTNAGG	1 cut(s)	342
BsuI	GTATCC	1 cut(s)	284
BsuRI	GGCC	3 cut(s)	360, 465, 1292
BtgI	CCRYGG	3 cut(s)	499, 1005, 1293
BtsCI	GGATG	3 cut(s)	98, 352, 609
BtsI	GCAGTG	2 cut(s)	835, 1529
BtsIMutI	CAGTG	4 cut(s)	803, 835, 1333, 1529
BveI	ACCTGC	1 cut(s)	345
Cac8I	GCNNGC	4 cut(s)	410, 447, 1244, 1347
CaiI	CAGNNNCTG	3 cut(s)	337, 805, 1589
CciI	TCATGA	1 cut(s)	193
CfoI	GCGC	1 cut(s)	799
Cfr10I	RCCGGY	2 cut(s)	1309, 1345
Cfr13I	GGNCC	1 cut(s)	334
CseI	GACGC	2 cut(s)	268, 1326
Csp6I	GTAC	8 cut(s)	110, 313, 496, 1069, 1089, 1171, 1210, 1602
CspCI	CAANNNNNGTGG	2 cut(s)	1067, 1102
CviQI	GTAC	8 cut(s)	110, 313, 496, 1069, 1089, 1171, 1210, 1602
DdeI	CTNAG	7 cut(s)	342, 778, 806, 1125, 1341, 1350, 1582
DpnI	GATC	6 cut(s)	192, 228, 429, 473, 708, 738
DpnII	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
DraI	TTTAAA	1 cut(s)	1182
EaeI	YGGCCR	1 cut(s)	1290
EagI	CGGCCG	1 cut(s)	1290
Eam1104I	CTCTTC	6 cut(s)	46, 96, 255, 977, 1278, 1436
EarI	CTCTTC	6 cut(s)	46, 96, 255, 977, 1278, 1436
Ecl136II	GAGCTC	1 cut(s)	697
EclXI	CGGCCG	1 cut(s)	1290
Eco130I	CCWWGG	3 cut(s)	499, 520, 641
Eco147I	AGGCCT	1 cut(s)	360
Eco24I	GRGCYC	2 cut(s)	699, 972
Eco47I	GGWCC	1 cut(s)	334
Eco52I	CGGCCG	1 cut(s)	1290
Eco53kI	GAGCTC	1 cut(s)	697
Eco81I	CCTNAGG	1 cut(s)	342
Eco88I	CYCGRG	2 cut(s)	142, 403
EcoICRI	GAGCTC	1 cut(s)	697
EcoNI	CCTNNNNNAGG	2 cut(s)	329, 341
EcoO109I	RGGNCCY	1 cut(s)	334
EcoRII	CCWGG	1 cut(s)	330
EcoT14I	CCWWGG	3 cut(s)	499, 520, 641
EcoT22I	ATGCAT	1 cut(s)	1374
EcoT38I	GRGCYC	2 cut(s)	699, 972
ErhI	CCWWGG	3 cut(s)	499, 520, 641
Esp3I	CGTCTC	2 cut(s)	1128, 1344
FaqI	GGGAC	1 cut(s)	1140
FauNDI	CATATG	1 cut(s)	565
FbaI	TGATCA	1 cut(s)	190
FblI	GTMKAC	2 cut(s)	936, 982
Fnu4HI	GCNGC	7 cut(s)	380, 800, 1290, 1482, 1548, 1551, 1587
FokI	GGATG	3 cut(s)	85, 359, 616
FriOI	GRGCYC	2 cut(s)	699, 972
Fsp4HI	GCNGC	7 cut(s)	380, 800, 1290, 1482, 1548, 1551, 1587
FspBI	CTAG	1 cut(s)	485
GlaI	GCGC	1 cut(s)	798
GluI	GCNGC	7 cut(s)	380, 800, 1290, 1482, 1548, 1551, 1587
GsaI	CCCAGC	1 cut(s)	1569
GsuI	CTGGAG	2 cut(s)	148, 743
HaeIII	GGCC	3 cut(s)	360, 465, 1292
HapII	CCGG	7 cut(s)	288, 666, 906, 1310, 1346, 1464, 1515
HgaI	GACGC	2 cut(s)	268, 1326
HhaI	GCGC	1 cut(s)	799
Hin6I	GCGC	1 cut(s)	797
HinP1I	GCGC	1 cut(s)	797
HincII	GTYRAC	1 cut(s)	1225
HindII	GTYRAC	1 cut(s)	1225
HinfI	GANTC	5 cut(s)	127, 244, 538, 578, 1411
HpaII	CCGG	7 cut(s)	288, 666, 906, 1310, 1346, 1464, 1515
HphI	GGTGA	6 cut(s)	5, 253, 319, 829, 869, 959
Hpy166II	GTNNAC	3 cut(s)	937, 983, 1225
Hpy188I	TCNGA	6 cut(s)	460, 1025, 1062, 1128, 1192, 1380
Hpy188III	TCNNGA	6 cut(s)	131, 165, 194, 395, 722, 1143
Hpy8I	GTNNAC	3 cut(s)	937, 983, 1225
Hpy99I	CGWCG	2 cut(s)	284, 479
HpyAV	CCTTC	6 cut(s)	20, 202, 258, 455, 474, 1522
HpyCH4III	ACNGT	4 cut(s)	367, 947, 1056, 1093
HpyCH4IV	ACGT	1 cut(s)	1153
HpyCH4V	TGCA	8 cut(s)	179, 350, 845, 1307, 1372, 1419, 1595, 1624
HpyF10VI	GCNNNNNNNGC	3 cut(s)	176, 414, 1592
HpyF3I	CTNAG	7 cut(s)	342, 778, 806, 1125, 1341, 1350, 1582
HpySE526I	ACGT	1 cut(s)	1153
HspAI	GCGC	1 cut(s)	797
KpnI	GGTACC	1 cut(s)	316
KroI	GCCGGC	1 cut(s)	1345
KroNI	GCCGGC	1 cut(s)	1347
Ksp22I	TGATCA	1 cut(s)	190
Kzo9I	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
LguI	GCTCTTC	2 cut(s)	255, 977
LmnI	GCTCC	3 cut(s)	702, 1025, 1386
Lsp1109I	GCAGC	4 cut(s)	391, 811, 1468, 1537
LweI	GCATC	3 cut(s)	188, 337, 1359
MaeI	CTAG	1 cut(s)	485
MaeII	ACGT	1 cut(s)	1153
MaeIII	GTNAC	4 cut(s)	241, 419, 830, 1259
MalI	GATC	6 cut(s)	192, 228, 429, 473, 708, 738
MboI	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
MfeI	CAATTG	1 cut(s)	295
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	2 cut(s)	699, 972
MluCI	AATT	5 cut(s)	295, 509, 930, 1177, 1381
MlyI	GAGTC	2 cut(s)	136, 238
MmeI	TCCRAC	2 cut(s)	1085, 1342
Mph1103I	ATGCAT	1 cut(s)	1374
MroNI	GCCGGC	1 cut(s)	1345
MseI	TTAA	4 cut(s)	558, 890, 1176, 1181
MslI	CAYNNNNRTG	1 cut(s)	198
MspA1I	CMGCKG	1 cut(s)	1589
MspCI	CTTAAG	1 cut(s)	889
MspI	CCGG	7 cut(s)	288, 666, 906, 1310, 1346, 1464, 1515
MspR9I	CCNGG	4 cut(s)	332, 666, 906, 1516
MunI	CAATTG	1 cut(s)	295
MvaI	CCWGG	1 cut(s)	332
MvnI	CGCG	1 cut(s)	797
MwoI	GCNNNNNNNGC	3 cut(s)	176, 414, 1592
NaeI	GCCGGC	1 cut(s)	1347
NciI	CCSGG	3 cut(s)	666, 906, 1516
NcoI	CCATGG	1 cut(s)	499
NdeI	CATATG	1 cut(s)	565
NdeII	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
NgoMIV	GCCGGC	1 cut(s)	1345
NlaIV	GGNNCC	4 cut(s)	314, 738, 903, 1027
NmuCI	GTSAC	3 cut(s)	241, 830, 1259
NsiI	ATGCAT	1 cut(s)	1374
NspI	RCATGY	4 cut(s)	1246, 1307, 1376, 1409
NspV	TTCGAA	2 cut(s)	513, 648
PaeI	GCATGC	1 cut(s)	1246
PagI	TCATGA	1 cut(s)	193
PceI	AGGCCT	1 cut(s)	360
PciSI	GCTCTTC	2 cut(s)	255, 977
PdiI	GCCGGC	1 cut(s)	1347
PfeI	GAWTC	3 cut(s)	538, 578, 1411
PfoI	TCCNGGA	1 cut(s)	1514
PkrI	GCNGC	7 cut(s)	381, 801, 1291, 1483, 1549, 1552, 1588
PleI	GAGTC	2 cut(s)	135, 238
PpsI	GAGTC	2 cut(s)	135, 238
PpuMI	RGGWCCY	1 cut(s)	334
Psp124BI	GAGCTC	1 cut(s)	699
Psp5II	RGGWCCY	1 cut(s)	334
Psp6I	CCWGG	1 cut(s)	330
PspFI	CCCAGC	1 cut(s)	1565
PspGI	CCWGG	1 cut(s)	330
PspN4I	GGNNCC	4 cut(s)	314, 738, 903, 1027
PspPI	GGNCC	1 cut(s)	334
PspPPI	RGGWCCY	1 cut(s)	334
PstNI	CAGNNNCTG	3 cut(s)	337, 805, 1589
PsuI	RGATCY	1 cut(s)	736
RsaI	GTAC	8 cut(s)	111, 314, 497, 1070, 1090, 1172, 1211, 1603
RsaNI	GTAC	8 cut(s)	110, 313, 496, 1069, 1089, 1171, 1210, 1602
RseI	CAYNNNNRTG	1 cut(s)	198
SacI	GAGCTC	1 cut(s)	699
SapI	GCTCTTC	2 cut(s)	255, 977
SaqAI	TTAA	4 cut(s)	558, 890, 1176, 1181
SatI	GCNGC	7 cut(s)	380, 800, 1290, 1482, 1548, 1551, 1587
Sau3AI	GATC	6 cut(s)	190, 226, 427, 471, 706, 736
Sau96I	GGNCC	1 cut(s)	334
ScaI	AGTACT	2 cut(s)	111, 1603
SchI	GAGTC	2 cut(s)	136, 238
ScrFI	CCNGG	4 cut(s)	332, 666, 906, 1516
SduI	GDGCHC	2 cut(s)	699, 972
SfaNI	GCATC	3 cut(s)	188, 337, 1359
SfcI	CTRYAG	1 cut(s)	979
SfuI	TTCGAA	2 cut(s)	513, 648
SinI	GGWCC	1 cut(s)	334
SmiMI	CAYNNNNRTG	1 cut(s)	198
SmlI	CTYRAG	2 cut(s)	582, 889
SmoI	CTYRAG	2 cut(s)	582, 889
SphI	GCATGC	1 cut(s)	1246
Sse9I	AATT	5 cut(s)	295, 509, 930, 1177, 1381
SseBI	AGGCCT	1 cut(s)	360
SsiI	CCGC	5 cut(s)	185, 1289, 1532, 1547, 1587
SspMI	CTAG	1 cut(s)	485
SstI	GAGCTC	1 cut(s)	699
StuI	AGGCCT	1 cut(s)	360
StyD4I	CCNGG	4 cut(s)	330, 664, 904, 1514
StyI	CCWWGG	3 cut(s)	499, 520, 641
TaaI	ACNGT	4 cut(s)	367, 947, 1056, 1093
TaiI	ACGT	1 cut(s)	1156
TaqI	TCGA	7 cut(s)	474, 513, 648, 683, 915, 1098, 1142
TasI	AATT	5 cut(s)	295, 509, 930, 1177, 1381
TatI	WGTACW	4 cut(s)	109, 1088, 1209, 1601
TauI	GCSGC	3 cut(s)	1292, 1550, 1589
TfiI	GAWTC	3 cut(s)	538, 578, 1411
Tru1I	TTAA	4 cut(s)	558, 890, 1176, 1181
Tru9I	TTAA	4 cut(s)	558, 890, 1176, 1181
TscAI	CASTG	4 cut(s)	810, 835, 1333, 1529
TseFI	GTSAC	3 cut(s)	241, 830, 1259
TseI	GCWGC	4 cut(s)	379, 799, 1481, 1550
Tsp45I	GTSAC	3 cut(s)	241, 830, 1259
TspDTI	ATGAA	4 cut(s)	231, 582, 1403, 1603
TspGWI	ACGGA	3 cut(s)	317, 492, 994
TspRI	CASTG	4 cut(s)	810, 835, 1333, 1529
Vha464I	CTTAAG	1 cut(s)	889
VpaK11BI	GGWCC	1 cut(s)	334
XagI	CCTNNNNNAGG	2 cut(s)	329, 341
XceI	RCATGY	4 cut(s)	1246, 1307, 1376, 1409
XmiI	GTMKAC	2 cut(s)	936, 982
XspI	CTAG	1 cut(s)	485
ZrmI	AGTACT	2 cut(s)	111, 1603
Zsp2I	ATGCAT	1 cut(s)	1374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.