Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011502

Physical Location & Seq

Genomic Coordinates Reverse (-)

9680259 .. 9682433

Gene Structure 2175 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCTTTGTTTCATCCATTTCTTTCACACTATTCCACCTTTCTCCTGTCCCCAGTAACCCACAAACAATTAGGAGCTACACAACCACAGCCACAGCCACAGCCACAGCCGCTCAAACTAGTCCCGGTTGCACACAGACCGCCATTCAACGTCCCAACACGAAAGACCAAGTGCGGTGCAGTCGCAGACATCAAACCTGCAGCACCAGCTCCACTAGAAGATGATGATGAAGATCACAAGGTCCTGGTAGGCCATACCAGCGAGCAAGAGCGGAGAGGAGAGAGGATCGTGGCGGACTATGATTGGACGGAGGAGTGGTACCCTCTGTACCTCACCCAGGACATTCCAGAGGATGCACCTTTGGGTCTAACTGTGTTCGATAAGCAACTAGTTCTCTACAGAGACGGCAATGGTGTGCTTCAGTGTTACCAAGATCGCTGCCCCCACAGGTTGGCGAAATTATCAGAAGGCCAACTGATTGATGGGAGACTGGAATGTTTATATCATGGTTGGCAATTTGAAGGTGCAGGAAAATGTGTCAAGATCCCTCAGCTTCCAGCTGATGCCAAAATTCCTAGGTCGGCTTGTGTGAAAACATATGAGGTGAGGGACTCGCAAGGTGTTGTGTGGGTTTGGATGTCTCATAAGACACCACCAAACCCTGCTAAGATTCCTTGGTTTGAGAACTTTGACAGGCCAGGGTTCCAAGATACTTCAACAACCCATGAGCTTCCTTATGATCACTCCATACTTTTGGAGAACCTCATGGATCCAGCCCATGTTCCAATCTCACATGACAGGACAGACTGGAGTGCTAAAAGGGAAGATGCTCAACCACTGCGTTTTGAGGTCACCGAACGCACCGACCGAGGATTTGCAGGCTGGTGGGGGAAGACAACTGATCAGTCCGCCTCCAGCTTCTTGCGCTTTGAAGCACCGTGTTCTCTTCAAAACAATCGAGAAATTGTTGACGACAAGACTGGGGAAACACACTACTTCTCAGGTCTCTTTCTTTGCAGACCAACTGGACAAGGGAAGTCCATGCTCATTGTGAGGTTTGGAGGAACAAAAAGGTCTCCTCTGGCAAAATTGTTTCCCAAATGGTACTTCCATCAGAATGCAGGAAAGGTGTTTGAGCAAGACATGGGATTCCTTTCTTCTCAGAATGAGATACTTATGAAAGAAAAAGTGCCCACCAAGAACCTCTACCTTAGCTTGAAATCCTCAGATACATGGGTAGCTGAATACAGAAAATGGATGGACAAAGTTGGGCATGGGATGCCTTACCACTTTGGCCACAGCACAATATCGTTGCCCAAAGAGCCTGCCGTGGTCGAACATGCCCCTGCTGGACTTGTTGCAGGTGTATCGGCATCTTTGCCTGCCAAGGGAGGCATTGGAACCATGCATGCTCCAAATTTGGCCAACCGGTATTTCCGGCATGTGGTTCATTGCAAAGAGTGCAGAAATGTTGTCAAAGCTTTCCAAGCTTGGAAAAATTACCTTTCTGCTATTGCTGTTGCATTGACCGCTTTGGCAATTCTAATCTCCGGAAGGCAATGGAAGGCTCTTCTGTTAGTATCAGCAGCCGTATGCTCCGGCGGAGTTTATGCATGCTCGGCTGCTGTTGCACTGAACACAACAAATTTCATTAGGACACATAGGAGATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PaO Rieske

Protein Analysis

557

Amino Acids

62.6

Weight (kDa)

8.67

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rieske	PF00355	105 - 191	2.3e-24	Rieske [2Fe-2S] domain
PaO	PF08417	310 - 396	1.8e-23	Pheophorbide a oxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24820
fragaria_vesca	FvH4_2g41330
malus_domestica	MD08G1051400.v1.1
prunus_persica	Prupe.1G397100_v2.0.a1 Prupe.1G397200_v2.0.a1 Prupe.1G397200_v2.0.a1 Prupe.1G397200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0299151
rosa_laevigata	RLG00000011459 RLG00000028023
rosa_multiflora	Rmu_sc0001434.1_g000017
rosa_roxburghii	Rroxscaffold_4G00298790 Rroxscaffold_7G00168970
rosa_rugosa	Rorug06G0285700 Rorug06G0285800
rosa_samantha	Rh6AG396700 Rh6BG405200 Rh6CG411200 Rh6DG397900
rosa_wichuraiana	Rw6G034730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1352
Acc36I	ACCTGC	2 cut(s)	205, 1352
Acc65I	GGTACC	1 cut(s)	318
AccB1I	GGYRCC	1 cut(s)	318
AccB7I	CCANNNNNTGG	1 cut(s)	451
AccBSI	CCGCTC	2 cut(s)	112, 271
AccIII	TCCGGA	1 cut(s)	1550
AciI	CCGC	8 cut(s)	110, 140, 174, 271, 293, 909, 1530, 1602
AclWI	GGATC	4 cut(s)	293, 538, 764, 777
AcoI	YGGCCR	2 cut(s)	1294, 1422
AcsI	RAATTY	3 cut(s)	570, 1417, 1645
AcuI	CTGAAG	1 cut(s)	404
AfaI	GTAC	3 cut(s)	320, 329, 1106
AfiI	CCNNNNNNNGG	4 cut(s)	337, 451, 1388, 1444
AgeI	ACCGGT	1 cut(s)	1428
AgsI	TTSAA	6 cut(s)	148, 521, 717, 932, 950, 1219
AhlI	ACTAGT	2 cut(s)	118, 388
AjnI	CCWGG	3 cut(s)	243, 336, 697
AjuI	GAANNNNNNNTTGG	4 cut(s)	1091, 1123, 1418, 1450
Alw26I	GTCTC	5 cut(s)	396, 481, 645, 1010, 1080
AlwI	GGATC	4 cut(s)	293, 538, 764, 777
Aor13HI	TCCGGA	1 cut(s)	1550
AoxI	GGCC	5 cut(s)	250, 469, 695, 1294, 1422
ApeKI	GCWGC	4 cut(s)	200, 438, 1586, 1622
ApoI	RAATTY	3 cut(s)	570, 1417, 1645
ArsI	GACNNNNNNTTYG	2 cut(s)	857, 889
AsiGI	ACCGGT	1 cut(s)	1428
Asp718I	GGTACC	1 cut(s)	318
AspA2I	CCTAGG	1 cut(s)	575
AspLEI	GCGC	1 cut(s)	927
AspS9I	GGNCC	1 cut(s)	241
AsuC2I	CCSGG	1 cut(s)	125
AsuHPI	GGTGA	3 cut(s)	325, 616, 844
AvaII	GGWCC	1 cut(s)	241
AvrII	CCTAGG	1 cut(s)	575
BaeGI	GKGCMC	1 cut(s)	1194
BaeI	ACNNNNGTAYC	2 cut(s)	1221, 1254
BalI	TGGCCA	2 cut(s)	1296, 1424
BamHI	GGATCC	1 cut(s)	769
BanI	GGYRCC	1 cut(s)	318
BbsI	GAAGAC	1 cut(s)	899
BbvCI	CCTCAGC	1 cut(s)	549
BbvI	GCAGC	4 cut(s)	212, 425, 1598, 1609
BccI	CCATC	3 cut(s)	476, 1119, 1252
BceAI	ACGGC	3 cut(s)	421, 1313, 1574
BcgI	CGANNNNNNTGC	2 cut(s)	1350, 1384
BciT130I	CCWGG	3 cut(s)	245, 338, 699
BclI	TGATCA	2 cut(s)	739, 901
BcnI	CCSGG	1 cut(s)	125
BcoDI	GTCTC	5 cut(s)	396, 481, 645, 1010, 1080
BcuI	ACTAGT	2 cut(s)	118, 388
BfaI	CTAG	4 cut(s)	119, 215, 389, 576
BfmI	CTRYAG	2 cut(s)	198, 397
BfuAI	ACCTGC	2 cut(s)	205, 1352
BisI	GCNGC	5 cut(s)	110, 201, 439, 1587, 1623
BlnI	CCTAGG	1 cut(s)	575
BlsI	GCNGC	5 cut(s)	111, 202, 440, 1588, 1624
Bme1390I	CCNGG	4 cut(s)	125, 245, 338, 699
Bme18I	GGWCC	1 cut(s)	241
BmgT120I	GGNCC	1 cut(s)	241
BmiI	GGNNCC	4 cut(s)	320, 704, 771, 1402
BmrFI	CCNGG	4 cut(s)	125, 245, 338, 699
BmrI	ACTGGG	2 cut(s)	47, 990
BmsI	GCATC	5 cut(s)	343, 553, 817, 1269, 1382
BmuI	ACTGGG	2 cut(s)	47, 990
BpiI	GAAGAC	1 cut(s)	899
BpmI	CTGGAG	2 cut(s)	829, 898
Bpu10I	CCTNAGC	2 cut(s)	549, 1211
BpuMI	CCSGG	1 cut(s)	125
BsaBI	GATNNNNATC	1 cut(s)	231
BsaI	GGTCTC	2 cut(s)	1010, 1080
BsaJI	CCNNGG	7 cut(s)	336, 575, 674, 698, 868, 1329, 1386
BsaWI	WCCGGW	2 cut(s)	1428, 1550
BsaXI	ACNNNNNCTCC	2 cut(s)	302, 332
Bsc4I	CCNNNNNNNGG	4 cut(s)	337, 451, 1388, 1444
Bse118I	RCCGGY	1 cut(s)	1428
Bse1I	ACTGG	5 cut(s)	53, 495, 812, 985, 1030
Bse3DI	GCAATG	3 cut(s)	415, 1450, 1565
Bse8I	GATNNNNATC	1 cut(s)	231
BseAI	TCCGGA	1 cut(s)	1550
BseBI	CCWGG	3 cut(s)	245, 338, 699
BseDI	CCNNGG	7 cut(s)	336, 575, 674, 698, 868, 1329, 1386
BseGI	GGATG	5 cut(s)	13, 358, 642, 1263, 1284
BseJI	GATNNNNATC	1 cut(s)	231
BseLI	CCNNNNNNNGG	4 cut(s)	337, 451, 1388, 1444
BseMI	GCAATG	3 cut(s)	415, 1450, 1565
BseMII	CTCAG	4 cut(s)	563, 1014, 1175, 1239
BseNI	ACTGG	5 cut(s)	53, 495, 812, 985, 1030
BseRI	GAGGAG	3 cut(s)	291, 326, 1068
BseSI	GKGCMC	1 cut(s)	1194
BseXI	GCAGC	4 cut(s)	212, 425, 1598, 1609
BsgI	GTGCAG	3 cut(s)	198, 546, 1483
Bsh1285I	CGRYCG	1 cut(s)	868
BshFI	GGCC	5 cut(s)	252, 471, 697, 1296, 1424
BshNI	GGYRCC	1 cut(s)	318
BshTI	ACCGGT	1 cut(s)	1428
BsiEI	CGRYCG	1 cut(s)	868
BsiSI	CCGG	5 cut(s)	125, 1429, 1438, 1551, 1599
BslFI	GGGAC	4 cut(s)	34, 107, 137, 623
BslI	CCNNNNNNNGG	4 cut(s)	337, 451, 1388, 1444
BsmAI	GTCTC	5 cut(s)	396, 481, 645, 1010, 1080
BsmBI	CGTCTC	1 cut(s)	396
BsmFI	GGGAC	4 cut(s)	34, 107, 137, 623
BsmI	GAATGC	1 cut(s)	1123
BsnI	GGCC	5 cut(s)	252, 471, 697, 1296, 1424
Bso31I	GGTCTC	2 cut(s)	1010, 1080
Bsp1286I	GDGCHC	1 cut(s)	1194
Bsp13I	TCCGGA	1 cut(s)	1550
Bsp143I	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
BspACI	CCGC	8 cut(s)	110, 140, 174, 271, 293, 909, 1530, 1602
BspANI	GGCC	5 cut(s)	252, 471, 697, 1296, 1424
BspCNI	CTCAG	4 cut(s)	562, 1013, 1174, 1238
BspEI	TCCGGA	1 cut(s)	1550
BspLI	GGNNCC	4 cut(s)	320, 704, 771, 1402
BspMAI	CTGCAG	1 cut(s)	202
BspMI	ACCTGC	2 cut(s)	205, 1352
BspPI	GGATC	4 cut(s)	293, 538, 764, 777
BspQI	GCTCTTC	1 cut(s)	1575
BspT107I	GGYRCC	1 cut(s)	318
BspTNI	GGTCTC	2 cut(s)	1010, 1080
BsrBI	CCGCTC	2 cut(s)	112, 271
BsrDI	GCAATG	3 cut(s)	415, 1450, 1565
BsrFI	RCCGGY	1 cut(s)	1428
BsrI	ACTGG	5 cut(s)	53, 495, 812, 985, 1030
BssAI	RCCGGY	1 cut(s)	1428
BssECI	CCNNGG	7 cut(s)	336, 575, 674, 698, 868, 1329, 1386
BssMI	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
BssT1I	CCWWGG	3 cut(s)	575, 674, 1386
Bst2UI	CCWGG	3 cut(s)	245, 338, 699
Bst4CI	ACNGT	2 cut(s)	373, 939
Bst6I	CTCTTC	2 cut(s)	951, 1575
BstAPI	GCANNNNNTGC	2 cut(s)	1279, 1461
BstC8I	GCNNGC	6 cut(s)	263, 880, 1326, 1383, 1410, 1615
BstDEI	CTNAG	6 cut(s)	549, 666, 1000, 1161, 1211, 1225
BstDSI	CCRYGG	1 cut(s)	1329
BstEII	GGTNACC	1 cut(s)	850
BstENI	CCTNNNNNAGG	1 cut(s)	335
BstF5I	GGATG	5 cut(s)	13, 358, 642, 1263, 1284
BstHHI	GCGC	1 cut(s)	927
BstKTI	GATC	7 cut(s)	235, 288, 436, 546, 742, 772, 904
BstMAI	GTCTC	5 cut(s)	396, 481, 645, 1010, 1080
BstMBI	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
BstMCI	CGRYCG	1 cut(s)	868
BstNI	CCWGG	3 cut(s)	245, 338, 699
BstNSI	RCATGY	4 cut(s)	1343, 1412, 1445, 1617
BstPI	GGTNACC	1 cut(s)	850
BstSCI	CCNGG	4 cut(s)	123, 243, 336, 697
BstSFI	CTRYAG	2 cut(s)	198, 397
BstSLI	GKGCMC	1 cut(s)	1194
BstV1I	GCAGC	4 cut(s)	212, 425, 1598, 1609
BstV2I	GAAGAC	1 cut(s)	899
BstX2I	RGATCY	2 cut(s)	543, 769
BstXI	CCANNNNNNTGG	1 cut(s)	754
BstYI	RGATCY	2 cut(s)	543, 769
BsuRI	GGCC	5 cut(s)	252, 471, 697, 1296, 1424
BtgI	CCRYGG	1 cut(s)	1329
BtsCI	GGATG	5 cut(s)	13, 358, 642, 1263, 1284
BtsI	GCAGTG	1 cut(s)	836
BtsIMutI	CAGTG	3 cut(s)	428, 836, 1631
BveI	ACCTGC	2 cut(s)	205, 1352
Cac8I	GCNNGC	6 cut(s)	263, 880, 1326, 1383, 1410, 1615
CfoI	GCGC	1 cut(s)	927
Cfr10I	RCCGGY	1 cut(s)	1428
Cfr13I	GGNCC	1 cut(s)	241
Csp6I	GTAC	3 cut(s)	319, 328, 1105
CspAI	ACCGGT	1 cut(s)	1428
CviQI	GTAC	3 cut(s)	319, 328, 1105
DdeI	CTNAG	6 cut(s)	549, 666, 1000, 1161, 1211, 1225
DpnI	GATC	7 cut(s)	234, 287, 435, 545, 741, 771, 903
DpnII	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
EaeI	YGGCCR	2 cut(s)	1294, 1422
Eam1104I	CTCTTC	2 cut(s)	951, 1575
EarI	CTCTTC	2 cut(s)	951, 1575
EciI	GGCGGA	3 cut(s)	308, 898, 1617
Eco130I	CCWWGG	3 cut(s)	575, 674, 1386
Eco31I	GGTCTC	2 cut(s)	1010, 1080
Eco47I	GGWCC	1 cut(s)	241
Eco57I	CTGAAG	1 cut(s)	404
Eco91I	GGTNACC	1 cut(s)	850
EcoNI	CCTNNNNNAGG	1 cut(s)	335
EcoO109I	RGGNCCY	1 cut(s)	241
EcoO65I	GGTNACC	1 cut(s)	850
EcoRII	CCWGG	3 cut(s)	243, 336, 697
EcoT14I	CCWWGG	3 cut(s)	575, 674, 1386
EcoT22I	ATGCAT	2 cut(s)	1410, 1615
ErhI	CCWWGG	3 cut(s)	575, 674, 1386
Esp3I	CGTCTC	1 cut(s)	396
FaqI	GGGAC	4 cut(s)	34, 107, 137, 623
FauNDI	CATATG	1 cut(s)	598
FbaI	TGATCA	2 cut(s)	739, 901
Fnu4HI	GCNGC	5 cut(s)	110, 201, 439, 1587, 1623
FokI	GGATG	4 cut(s)	365, 649, 1270, 1291
Fsp4HI	GCNGC	5 cut(s)	110, 201, 439, 1587, 1623
FspBI	CTAG	4 cut(s)	119, 215, 389, 576
GlaI	GCGC	1 cut(s)	926
GluI	GCNGC	5 cut(s)	110, 201, 439, 1587, 1623
GsuI	CTGGAG	2 cut(s)	829, 898
HaeIII	GGCC	5 cut(s)	252, 471, 697, 1296, 1424
HapII	CCGG	5 cut(s)	125, 1429, 1438, 1551, 1599
HhaI	GCGC	1 cut(s)	927
Hin6I	GCGC	1 cut(s)	925
HinP1I	GCGC	1 cut(s)	925
HincII	GTYRAC	1 cut(s)	970
HindII	GTYRAC	1 cut(s)	970
HindIII	AAGCTT	2 cut(s)	1479, 1488
HinfI	GANTC	3 cut(s)	611, 670, 1149
HpaII	CCGG	5 cut(s)	125, 1429, 1438, 1551, 1599
HphI	GGTGA	3 cut(s)	325, 616, 844
Hpy166II	GTNNAC	1 cut(s)	970
Hpy188I	TCNGA	4 cut(s)	466, 1116, 1164, 1228
Hpy188III	TCNNGA	4 cut(s)	347, 541, 959, 1551
Hpy8I	GTNNAC	1 cut(s)	970
HpyAV	CCTTC	4 cut(s)	461, 515, 1548, 1558
HpyCH4III	ACNGT	2 cut(s)	373, 939
HpyCH4IV	ACGT	1 cut(s)	150
HpyF3I	CTNAG	6 cut(s)	549, 666, 1000, 1161, 1211, 1225
HpySE526I	ACGT	1 cut(s)	150
HspAI	GCGC	1 cut(s)	925
Kpn2I	TCCGGA	1 cut(s)	1550
KpnI	GGTACC	1 cut(s)	322
Ksp22I	TGATCA	2 cut(s)	739, 901
Kzo9I	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
LguI	GCTCTTC	1 cut(s)	1575
LmnI	GCTCC	4 cut(s)	74, 214, 1417, 1601
Lsp1109I	GCAGC	4 cut(s)	212, 425, 1598, 1609
LweI	GCATC	5 cut(s)	343, 553, 817, 1269, 1382
MaeI	CTAG	4 cut(s)	119, 215, 389, 576
MaeII	ACGT	1 cut(s)	150
MaeIII	GTNAC	3 cut(s)	55, 425, 850
MalI	GATC	7 cut(s)	234, 287, 435, 545, 741, 771, 903
MbiI	CCGCTC	2 cut(s)	112, 271
MboI	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
MboII	GAAGA	7 cut(s)	230, 242, 836, 904, 938, 1149, 1562
MflI	RGATCY	2 cut(s)	543, 769
MhlI	GDGCHC	1 cut(s)	1194
MlsI	TGGCCA	2 cut(s)	1296, 1424
MluNI	TGGCCA	2 cut(s)	1296, 1424
MlyI	GAGTC	1 cut(s)	605
Mox20I	TGGCCA	2 cut(s)	1296, 1424
Mph1103I	ATGCAT	2 cut(s)	1410, 1615
MroI	TCCGGA	1 cut(s)	1550
MscI	TGGCCA	2 cut(s)	1296, 1424
MslI	CAYNNNNRTG	1 cut(s)	1116
Msp20I	TGGCCA	2 cut(s)	1296, 1424
MspA1I	CMGCKG	1 cut(s)	560
MspI	CCGG	5 cut(s)	125, 1429, 1438, 1551, 1599
MspR9I	CCNGG	4 cut(s)	125, 245, 338, 699
Mva1269I	GAATGC	1 cut(s)	1123
MvaI	CCWGG	3 cut(s)	245, 338, 699
NciI	CCSGG	1 cut(s)	125
NdeI	CATATG	1 cut(s)	598
NdeII	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
NlaIV	GGNNCC	4 cut(s)	320, 704, 771, 1402
NmeAIII	GCCGAG	1 cut(s)	1598
NmuCI	GTSAC	1 cut(s)	850
NsiI	ATGCAT	2 cut(s)	1410, 1615
NspI	RCATGY	4 cut(s)	1343, 1412, 1445, 1617
PaeI	GCATGC	2 cut(s)	1412, 1617
PaqCI	CACCTGC	1 cut(s)	1352
PciSI	GCTCTTC	1 cut(s)	1575
PcsI	WCGNNNNNNNCGW	1 cut(s)	865
PctI	GAATGC	1 cut(s)	1123
PfeI	GAWTC	2 cut(s)	670, 1149
PflMI	CCANNNNNTGG	1 cut(s)	451
PinAI	ACCGGT	1 cut(s)	1428
PkrI	GCNGC	5 cut(s)	111, 202, 440, 1588, 1624
PleI	GAGTC	1 cut(s)	605
PpsI	GAGTC	1 cut(s)	605
PpuMI	RGGWCCY	1 cut(s)	241
Psp5II	RGGWCCY	1 cut(s)	241
Psp6I	CCWGG	3 cut(s)	243, 336, 697
PspEI	GGTNACC	1 cut(s)	850
PspGI	CCWGG	3 cut(s)	243, 336, 697
PspN4I	GGNNCC	4 cut(s)	320, 704, 771, 1402
PspPI	GGNCC	1 cut(s)	241
PspPPI	RGGWCCY	1 cut(s)	241
PstI	CTGCAG	1 cut(s)	202
PsuI	RGATCY	2 cut(s)	543, 769
PvuII	CAGCTG	1 cut(s)	560
RsaI	GTAC	3 cut(s)	320, 329, 1106
RsaNI	GTAC	3 cut(s)	319, 328, 1105
RseI	CAYNNNNRTG	1 cut(s)	1116
SapI	GCTCTTC	1 cut(s)	1575
SatI	GCNGC	5 cut(s)	110, 201, 439, 1587, 1623
Sau3AI	GATC	7 cut(s)	232, 285, 433, 543, 739, 769, 901
Sau96I	GGNCC	1 cut(s)	241
SchI	GAGTC	1 cut(s)	605
ScrFI	CCNGG	4 cut(s)	125, 245, 338, 699
SduI	GDGCHC	1 cut(s)	1194
SfaNI	GCATC	5 cut(s)	343, 553, 817, 1269, 1382
SfcI	CTRYAG	2 cut(s)	198, 397
SinI	GGWCC	1 cut(s)	241
SmiMI	CAYNNNNRTG	1 cut(s)	1116
SpeI	ACTAGT	2 cut(s)	118, 388
SphI	GCATGC	2 cut(s)	1412, 1617
SsiI	CCGC	8 cut(s)	110, 140, 174, 271, 293, 909, 1530, 1602
SspMI	CTAG	4 cut(s)	119, 215, 389, 576
StyD4I	CCNGG	4 cut(s)	123, 243, 336, 697
StyI	CCWWGG	3 cut(s)	575, 674, 1386
TaaI	ACNGT	2 cut(s)	373, 939
TaiI	ACGT	1 cut(s)	153
TaqI	TCGA	3 cut(s)	378, 958, 1335
TaqII	GACCGA	1 cut(s)	882
TauI	GCSGC	1 cut(s)	112
TfiI	GAWTC	2 cut(s)	670, 1149
TscAI	CASTG	3 cut(s)	428, 843, 1638
TseFI	GTSAC	1 cut(s)	850
TseI	GCWGC	4 cut(s)	200, 438, 1586, 1622
Tsp45I	GTSAC	1 cut(s)	850
TspDTI	ATGAA	4 cut(s)	243, 1193, 1439, 1639
TspGWI	ACGGA	1 cut(s)	323
TspRI	CASTG	3 cut(s)	428, 843, 1638
Van91I	CCANNNNNTGG	1 cut(s)	451
VpaK11BI	GGWCC	1 cut(s)	241
XagI	CCTNNNNNAGG	1 cut(s)	335
XapI	RAATTY	3 cut(s)	570, 1417, 1645
XceI	RCATGY	4 cut(s)	1343, 1412, 1445, 1617
XcmI	CCANNNNNNNNNTGG	1 cut(s)	479
XmaJI	CCTAGG	1 cut(s)	575
XspI	CTAG	4 cut(s)	119, 215, 389, 576
Zsp2I	ATGCAT	2 cut(s)	1410, 1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.