MD08G1073100.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
5908697 .. 5910713
2017 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1073100.v1.1.491

Sequence Viewer

Length: 1236 bp
ATGACTAGAACGAAAATCCTCACATGGAAATGCATTATCCTAGGCTGTTACAAGAGCACTACAGATCCAGAGAGCCGCCTGCCGCAGCCAGTTCTAAAGCAAACCCCTTTGCTGCAGCCGAGAGTCTCCATCTCGGATGTAAGCGATGATCCGAGCTCGACTCTCTTCGCAGACGATCTCTCCAACCCCCTCATCGGCCTCAACCTTCACGTGTTTTCGCTCGTGGAGCTTGGAATTGTCACAAGAAATTTTTCACGTAGTCGTCTACTCGGGGAAGGTGGGTTTGGACCAGTGTTCAAAGGGTTTGTTGGTGACAAGCTTAGGCCTGGATTGAAGGCTCAGCCCGTGGCTGTCAAGCTGTTGGACTTGGATGGTTTGCAAGGCCACAAAGAATGGCTGGCAGAGATTATATTTCTTGGGCAACTGAGGCATCCAAATCTTGTGAAGCTGATTGGATATTGTTGTGAAGACGAGCAAAGGCTTCTAGTTTATGAATACATGGCAGGAGGAAGCTTAGAAAATCAACTCTTCAGAAGTTATTCCACTCCTCTGTCGTGGTCGAAAAGAATGAAAATCGCCATTGGGGCAGCGAAGGGCCTTGCATTCCTCCATGAAGCAGATCACAAGCCTGTCATAATCCGAGATTTCAAGACTTCAAACATTCTGCTGGAATCTGATCATACAGCTAAACTTTCAGATTTCGGGTTAGCAAAGGACGGTCCAGAAGGAGAAGACACACATGTAACAACACGTAGAATAGGGACACAGGGGTATGCAGACCCTGAATACATCATGACTGGTTGCTTGACGACCAAGAGTGATGTCTATAGTTTTGGAGTTGTTCTACTAGAGCTATTGACAGGTAAACGGTGCATAGATAATAGCCGTCCCAAACGCGAACAGAACCTTGTGGAGTGGGCAAAACCTCGCCTGAAGGACCCCAGAAAGCTCGACCAGATTATAGACCAGATGATGGAGGGACAGTATTCAACACGAGGGGCTCGAAAGGCGGCTGCATTGGCTTACAGTTGCTTGAGCCACAATCCAAAGCAAAGGCCTAGGATGAGTGATGCGGTTGTGATCTTGGAGGGTCTTCAGGACTTCAATGAAGGGTTAGTTATTAGGCCATTTGTTTATGTAGCACCAAATGATGAGGATAGTAATAGTAGCATCAAAACCATTGTAACAGCATCTCCAAATGAGATGTCAAATTTAAAACATGAAAATGATATTTGA

Protein Analysis

412

Amino Acids

45.84

Weight (kDa)

7.61

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 85 - 358 6.5e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 87 - 327 2.4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 973
AccI GTMKAC 1 cut(s) 265
AccII CGCG 1 cut(s) 897
AciI CCGC 4 cut(s) 76, 83, 1010, 1073
AclWI GGATC 2 cut(s) 59, 143
AcsI RAATTY 2 cut(s) 247, 1210
AcuI CTGAAG 3 cut(s) 514, 953, 1079
AcvI CACGTG 1 cut(s) 211
AfiI CCNNNNNNNGG 2 cut(s) 194, 973
AflIII ACRYGT 3 cut(s) 210, 739, 749
AgsI TTSAA 6 cut(s) 298, 334, 649, 657, 990, 1105
AjnI CCWGG 1 cut(s) 325
AjuI GAANNNNNNNTTGG 2 cut(s) 267, 299
AluBI AGCT 9 cut(s) 156, 229, 319, 358, 448, 513, 686, 853, 949
AluI AGCT 9 cut(s) 156, 229, 319, 358, 448, 513, 686, 853, 949
Alw21I GWGCWC 2 cut(s) 59, 158
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 2 cut(s) 59, 143
AlwNI CAGNNNCTG 1 cut(s) 782
Ama87I CYCGRG 1 cut(s) 269
AoxI GGCC 6 cut(s) 196, 323, 382, 595, 1055, 1124
ApeKI GCWGC 5 cut(s) 85, 112, 115, 587, 1013
ApoI RAATTY 2 cut(s) 247, 1210
ArsI GACNNNNNNTTYG 2 cut(s) 1190, 1222
Asp700I GAANNNNTTC 2 cut(s) 250, 538
AspA2I CCTAGG 2 cut(s) 40, 1058
AspS9I GGNCC 4 cut(s) 287, 595, 719, 937
AsuHPI GGTGA 1 cut(s) 323
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 3 cut(s) 287, 719, 937
AvrII CCTAGG 2 cut(s) 40, 1058
BanII GRGCYC 2 cut(s) 158, 1003
BauI CACGAG 2 cut(s) 221, 993
BbrPI CACGTG 1 cut(s) 211
BbsI GAAGAC 3 cut(s) 474, 738, 1085
Bbv12I GWGCWC 2 cut(s) 59, 158
BbvI GCAGC 5 cut(s) 97, 99, 127, 599, 1000
BccI CCATC 3 cut(s) 137, 365, 967
BceAI ACGGC 1 cut(s) 870
BciT130I CCWGG 1 cut(s) 327
BclI TGATCA 1 cut(s) 676
BcoDI GTCTC 1 cut(s) 130
BfaI CTAG 5 cut(s) 6, 41, 485, 848, 1059
BfmI CTRYAG 3 cut(s) 60, 113, 826
BglI GCCNNNNNGGC 1 cut(s) 584
BisI GCNGC 8 cut(s) 76, 83, 86, 113, 116, 588, 1011, 1014
BlnI CCTAGG 2 cut(s) 40, 1058
BlpI GCTNAGC 1 cut(s) 339
BlsI GCNGC 8 cut(s) 77, 84, 87, 114, 117, 589, 1012, 1015
Bme1390I CCNGG 1 cut(s) 327
Bme18I GGWCC 3 cut(s) 287, 719, 937
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 4 cut(s) 287, 595, 719, 937
BmiI GGNNCC 1 cut(s) 939
BmrFI CCNGG 1 cut(s) 327
BmsI GCATC 4 cut(s) 439, 1060, 1179, 1199
BpiI GAAGAC 3 cut(s) 474, 738, 1085
BplI GAGNNNNNCTC 2 cut(s) 145, 177
Bpu10I CCTNAGC 1 cut(s) 320
Bpu1102I GCTNAGC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 1054
BsaAI YACGTR 3 cut(s) 211, 257, 752
BsaJI CCNNGG 3 cut(s) 40, 345, 1058
BsaXI ACNNNNNCTCC 6 cut(s) 164, 194, 968, 998, 1177, 1207
Bsc4I CCNNNNNNNGG 2 cut(s) 194, 973
Bse1I ACTGG 3 cut(s) 89, 290, 802
BseBI CCWGG 1 cut(s) 327
BseDI CCNNGG 3 cut(s) 40, 345, 1058
BseGI GGATG 4 cut(s) 142, 376, 430, 1068
BseLI CCNNNNNNNGG 2 cut(s) 194, 973
BseMII CTCAG 2 cut(s) 353, 416
BseNI ACTGG 3 cut(s) 89, 290, 802
BseRI GAGGAG 1 cut(s) 537
BseXI GCAGC 5 cut(s) 97, 99, 127, 599, 1000
Bsh1236I CGCG 1 cut(s) 897
BshFI GGCC 6 cut(s) 198, 325, 384, 597, 1057, 1126
BsiHKAI GWGCWC 2 cut(s) 59, 158
BsiHKCI CYCGRG 1 cut(s) 269
BslFI GGGAC 3 cut(s) 775, 873, 993
BslI CCNNNNNNNGG 2 cut(s) 194, 973
BsmAI GTCTC 1 cut(s) 130
BsmFI GGGAC 3 cut(s) 775, 873, 993
BsmI GAATGC 1 cut(s) 602
BsnI GGCC 6 cut(s) 198, 325, 384, 597, 1057, 1126
BsoBI CYCGRG 1 cut(s) 269
Bsp1286I GDGCHC 3 cut(s) 59, 158, 1003
Bsp143I GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
Bsp1720I GCTNAGC 1 cut(s) 339
BspACI CCGC 4 cut(s) 76, 83, 1010, 1073
BspANI GGCC 6 cut(s) 198, 325, 384, 597, 1057, 1126
BspCNI CTCAG 2 cut(s) 352, 417
BspFNI CGCG 1 cut(s) 897
BspHI TCATGA 1 cut(s) 792
BspLI GGNNCC 1 cut(s) 939
BspMAI CTGCAG 1 cut(s) 117
BspPI GGATC 2 cut(s) 59, 143
BsrI ACTGG 3 cut(s) 89, 290, 802
BssECI CCNNGG 3 cut(s) 40, 345, 1058
BssMI GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
BssSI CACGAG 2 cut(s) 221, 993
BssT1I CCWWGG 2 cut(s) 40, 1058
Bst2BI CACGAG 2 cut(s) 221, 993
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 4 cut(s) 719, 870, 984, 1028
Bst6I CTCTTC 2 cut(s) 170, 533
BstBAI YACGTR 3 cut(s) 211, 257, 752
BstC8I GCNNGC 2 cut(s) 80, 399
BstDEI CTNAG 4 cut(s) 320, 339, 425, 514
BstDSI CCRYGG 1 cut(s) 345
BstF5I GGATG 4 cut(s) 142, 376, 430, 1068
BstFNI CGCG 1 cut(s) 897
BstKTI GATC 6 cut(s) 67, 151, 178, 622, 679, 1083
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
BstMWI GCNNNNNNNGC 5 cut(s) 226, 427, 584, 1007, 1019
BstNI CCWGG 1 cut(s) 327
BstNSI RCATGY 1 cut(s) 743
BstSCI CCNGG 1 cut(s) 325
BstSFI CTRYAG 3 cut(s) 60, 113, 826
BstUI CGCG 1 cut(s) 897
BstV1I GCAGC 5 cut(s) 97, 99, 127, 599, 1000
BstV2I GAAGAC 3 cut(s) 474, 738, 1085
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
BsuRI GGCC 6 cut(s) 198, 325, 384, 597, 1057, 1126
BtgI CCRYGG 1 cut(s) 345
BtgZI GCGATG 1 cut(s) 159
BtsCI GGATG 4 cut(s) 142, 376, 430, 1068
BtsIMutI CAGTG 1 cut(s) 297
Cac8I GCNNGC 2 cut(s) 80, 399
CaiI CAGNNNCTG 1 cut(s) 782
CciI TCATGA 1 cut(s) 792
Cfr13I GGNCC 4 cut(s) 287, 595, 719, 937
CviAII CATG 6 cut(s) 24, 499, 611, 740, 793, 1220
DdeI CTNAG 4 cut(s) 320, 339, 425, 514
DpnI GATC 6 cut(s) 66, 150, 177, 621, 678, 1082
DpnII GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
DraI TTTAAA 1 cut(s) 1215
Eam1104I CTCTTC 2 cut(s) 170, 533
EarI CTCTTC 2 cut(s) 170, 533
Ecl136II GAGCTC 1 cut(s) 156
Eco130I CCWWGG 2 cut(s) 40, 1058
Eco147I AGGCCT 2 cut(s) 325, 1057
Eco24I GRGCYC 2 cut(s) 158, 1003
Eco47I GGWCC 3 cut(s) 287, 719, 937
Eco53kI GAGCTC 1 cut(s) 156
Eco57I CTGAAG 3 cut(s) 514, 953, 1079
Eco72I CACGTG 1 cut(s) 211
Eco88I CYCGRG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 156
EcoO109I RGGNCCY 2 cut(s) 595, 937
EcoRII CCWGG 1 cut(s) 325
EcoT14I CCWWGG 2 cut(s) 40, 1058
EcoT22I ATGCAT 1 cut(s) 35
EcoT38I GRGCYC 2 cut(s) 158, 1003
ErhI CCWWGG 2 cut(s) 40, 1058
FaeI CATG 6 cut(s) 27, 502, 614, 743, 796, 1223
FaqI GGGAC 3 cut(s) 775, 873, 993
FatI CATG 6 cut(s) 23, 498, 610, 739, 792, 1219
FbaI TGATCA 1 cut(s) 676
FblI GTMKAC 1 cut(s) 265
Fnu4HI GCNGC 8 cut(s) 76, 83, 86, 113, 116, 588, 1011, 1014
FokI GGATG 4 cut(s) 149, 383, 417, 1075
FriOI GRGCYC 2 cut(s) 158, 1003
Fsp4HI GCNGC 8 cut(s) 76, 83, 86, 113, 116, 588, 1011, 1014
FspBI CTAG 5 cut(s) 6, 41, 485, 848, 1059
GluI GCNGC 8 cut(s) 76, 83, 86, 113, 116, 588, 1011, 1014
HaeIII GGCC 6 cut(s) 198, 325, 384, 597, 1057, 1126
Hin1II CATG 6 cut(s) 27, 502, 614, 743, 796, 1223
HindIII AAGCTT 2 cut(s) 317, 511
HinfI GANTC 3 cut(s) 123, 160, 671
HphI GGTGA 1 cut(s) 323
Hpy166II GTNNAC 2 cut(s) 266, 866
Hpy188I TCNGA 6 cut(s) 136, 153, 533, 641, 676, 697
Hpy188III TCNNGA 5 cut(s) 68, 649, 722, 793, 1097
Hpy8I GTNNAC 2 cut(s) 266, 866
HpyAV CCTTC 7 cut(s) 215, 269, 328, 586, 719, 928, 1103
HpyCH4III ACNGT 4 cut(s) 719, 870, 984, 1028
HpyCH4IV ACGT 3 cut(s) 210, 256, 751
HpyCH4V TGCA 7 cut(s) 33, 115, 379, 602, 776, 873, 1016
HpyF10VI GCNNNNNNNGC 5 cut(s) 226, 427, 584, 1007, 1019
HpyF3I CTNAG 4 cut(s) 320, 339, 425, 514
HpySE526I ACGT 3 cut(s) 210, 256, 751
Hsp92II CATG 6 cut(s) 27, 502, 614, 743, 796, 1223
Ksp22I TGATCA 1 cut(s) 676
Kzo9I GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
LmnI GCTCC 1 cut(s) 226
Lsp1109I GCAGC 5 cut(s) 97, 99, 127, 599, 1000
LweI GCATC 4 cut(s) 439, 1060, 1179, 1199
MaeI CTAG 5 cut(s) 6, 41, 485, 848, 1059
MaeII ACGT 3 cut(s) 210, 256, 751
MaeIII GTNAC 5 cut(s) 47, 238, 311, 742, 1183
MalI GATC 6 cut(s) 66, 150, 177, 621, 678, 1082
MboI GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
MboII GAAGA 5 cut(s) 157, 479, 520, 743, 1085
MflI RGATCY 1 cut(s) 64
MhlI GDGCHC 3 cut(s) 59, 158, 1003
MluCI AATT 3 cut(s) 234, 247, 1210
MlyI GAGTC 2 cut(s) 132, 154
MmeI TCCRAC 2 cut(s) 207, 342
Mph1103I ATGCAT 1 cut(s) 35
MroXI GAANNNNTTC 2 cut(s) 250, 538
MseI TTAA 1 cut(s) 1214
MslI CAYNNNNRTG 2 cut(s) 28, 1224
MspR9I CCNGG 1 cut(s) 327
Mva1269I GAATGC 1 cut(s) 602
MvaI CCWGG 1 cut(s) 327
MvnI CGCG 1 cut(s) 897
MwoI GCNNNNNNNGC 5 cut(s) 226, 427, 584, 1007, 1019
NdeII GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
NlaIII CATG 6 cut(s) 27, 502, 614, 743, 796, 1223
NlaIV GGNNCC 1 cut(s) 939
NmeAIII GCCGAG 1 cut(s) 144
NmuCI GTSAC 2 cut(s) 238, 311
NsiI ATGCAT 1 cut(s) 35
NspI RCATGY 1 cut(s) 743
PagI TCATGA 1 cut(s) 792
PceI AGGCCT 2 cut(s) 325, 1057
PciI ACATGT 1 cut(s) 739
PcsI WCGNNNNNNNCGW 1 cut(s) 1000
PctI GAATGC 1 cut(s) 602
PdmI GAANNNNTTC 2 cut(s) 250, 538
PfeI GAWTC 1 cut(s) 671
PflMI CCANNNNNTGG 1 cut(s) 973
PkrI GCNGC 8 cut(s) 77, 84, 87, 114, 117, 589, 1012, 1015
PleI GAGTC 2 cut(s) 131, 154
PmaCI CACGTG 1 cut(s) 211
PmlI CACGTG 1 cut(s) 211
PpsI GAGTC 2 cut(s) 131, 154
Ppu21I YACGTR 3 cut(s) 211, 257, 752
PpuMI RGGWCCY 1 cut(s) 937
PscI ACATGT 1 cut(s) 739
Psp124BI GAGCTC 1 cut(s) 158
Psp5II RGGWCCY 1 cut(s) 937
Psp6I CCWGG 1 cut(s) 325
PspCI CACGTG 1 cut(s) 211
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 1 cut(s) 939
PspPI GGNCC 4 cut(s) 287, 595, 719, 937
PspPPI RGGWCCY 1 cut(s) 937
PstI CTGCAG 1 cut(s) 117
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 64
RseI CAYNNNNRTG 2 cut(s) 28, 1224
SacI GAGCTC 1 cut(s) 158
SaqAI TTAA 1 cut(s) 1214
SatI GCNGC 8 cut(s) 76, 83, 86, 113, 116, 588, 1011, 1014
Sau3AI GATC 6 cut(s) 64, 148, 175, 619, 676, 1080
Sau96I GGNCC 4 cut(s) 287, 595, 719, 937
SchI GAGTC 2 cut(s) 132, 154
ScrFI CCNGG 1 cut(s) 327
SduI GDGCHC 3 cut(s) 59, 158, 1003
SfaNI GCATC 4 cut(s) 439, 1060, 1179, 1199
SfcI CTRYAG 3 cut(s) 60, 113, 826
SinI GGWCC 3 cut(s) 287, 719, 937
SmiMI CAYNNNNRTG 2 cut(s) 28, 1224
SmlI CTYRAG 1 cut(s) 1033
SmoI CTYRAG 1 cut(s) 1033
Sse9I AATT 3 cut(s) 234, 247, 1210
SseBI AGGCCT 2 cut(s) 325, 1057
SsiI CCGC 4 cut(s) 76, 83, 1010, 1073
SspMI CTAG 5 cut(s) 6, 41, 485, 848, 1059
SstI GAGCTC 1 cut(s) 158
StuI AGGCCT 2 cut(s) 325, 1057
StyD4I CCNGG 1 cut(s) 325
StyI CCWWGG 2 cut(s) 40, 1058
TaaI ACNGT 4 cut(s) 719, 870, 984, 1028
TaiI ACGT 3 cut(s) 213, 259, 754
TaqI TCGA 4 cut(s) 158, 560, 951, 1003
TasI AATT 3 cut(s) 234, 247, 1210
TauI GCSGC 3 cut(s) 78, 85, 1013
TfiI GAWTC 1 cut(s) 671
Tru1I TTAA 1 cut(s) 1214
Tru9I TTAA 1 cut(s) 1214
TscAI CASTG 1 cut(s) 297
TseFI GTSAC 2 cut(s) 238, 311
TseI GCWGC 5 cut(s) 85, 112, 115, 587, 1013
Tsp45I GTSAC 2 cut(s) 238, 311
TspDTI ATGAA 5 cut(s) 507, 584, 627, 1122, 1236
TspRI CASTG 1 cut(s) 297
Van91I CCANNNNNTGG 1 cut(s) 973
VpaK11BI GGWCC 3 cut(s) 287, 719, 937
XapI RAATTY 2 cut(s) 247, 1210
XceI RCATGY 1 cut(s) 743
XmaJI CCTAGG 2 cut(s) 40, 1058
XmiI GTMKAC 1 cut(s) 265
XmnI GAANNNNTTC 2 cut(s) 250, 538
XspI CTAG 5 cut(s) 6, 41, 485, 848, 1059
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.