RLG00000010361

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
988389 .. 990005
1617 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010361

Sequence Viewer

Length: 1218 bp
ATGACTGCAGAGAAGATCTCATGGAAATGTATCCTCCCAGTCTGTTGTTCCAAGAGTAGTGATGCGGATTCCACAAGACAAGTTCAAGATAAGCGAACCCCTTTTCTGCAGCAAAGGCTGTCCATGTCGGATGTAATTAGCGATCCCAGCTATGCAGATGATCTCTCCACTTCTTTTTCCGGCCTAAACCTTCACGTGTTTTCACTAGCGGAGCTTAAAGTTGCGACAAACAAGTTTTCATGGAGTAATTTGCTTGGTGAAGGCGGCTTTGGACCGGTTTACAAGGGGTTTGTTGATGACAATCTTAGGCCTGGAAAATTGAAGGCTCAGCCTGTAGCCGTCAAACTATTAGACTTGGATGGCTTTCAAGGCCATAGGGAGTGGCTGGCAGAACTTGTGTTTCTTGGACAGCTGAGGCATCCCAATATTGTTAAGCTGATCGGATATTGTTGCGAAGAGGAGCATAGGCTTCTGGTATACGAATACATAGCCAGAGGAAGCTTAGAAGATCAACTCTTCAGAAGATATTCTGCTGCTCTTCCATGGTCAACGAGAATGAAAATCGCAGTTGGGGCGGCTAAGGGCCTAGCCTTCCTGCATGAAGATCATAGGCCTGTCATATTCAGGGATTTTAAAACTTCAAATGTTCTGCTAGACTCTGATTATACAGCAAAACTTTCGGATTTTGGGTTAGCAAAGGATGGCCCAGAAGGAGAAGAAACTCATGTGGTAACACGTATACTAGGGACTCAAGGGTATGCAGCCCCTGAATACGTAAGGACAGGTCACTTAACAACCAAGAGCGATGTGTATAGCTTTGGAGTAGTTCTATTAGAGCTGTTGACAGGTAAAAGGTCGCTAGACAGAACCCGCCGGAGCCGTGAACAATGCCTTGTAGAATGGGCAAGGCCTCTGTTGAAGGACCCAAGAAAGCTTAACCGGATCATAGACCCGAGATTGGAGGGACAGTATTCCAGCAAAGGGGCTAGAAAGGCAGCTACATTGGCTTACACTTGCTTGAGCAACAACCCAAAGTCGAGGCCTATGATGACGGATGTGGTTATGATCTTGGAGTCTCTTCAGGGCTTCAACGAAGCGTTAACCTATCAACCATTTGTTTATGTGGCACCAAATGAAGAAAAGGACCGCAATGAAGATAAGGGAAAGTACCATTGCGGATACACCCTAAAAGAAGCTCTCACGACGGAATTGATTTGA

Protein Analysis

406

Amino Acids

45.67

Weight (kDa)

8.28

Isoelectric Point (pI)

31.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 82 - 355 4.7e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 83 - 354 6.1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1126
AccI GTMKAC 2 cut(s) 477, 739
AciI CCGC 7 cut(s) 65, 209, 264, 575, 871, 1147, 1176
AclWI GGATC 2 cut(s) 137, 950
AcuI CTGAAG 2 cut(s) 502, 1064
AcvI CACGTG 1 cut(s) 196
AfaI GTAC 1 cut(s) 1169
AfiI CCNNNNNNNGG 2 cut(s) 958, 981
AflIII ACRYGT 2 cut(s) 195, 734
AgeI ACCGGT 1 cut(s) 274
AgsI TTSAA 6 cut(s) 86, 322, 368, 642, 919, 1090
AjnI CCWGG 1 cut(s) 310
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
Alw26I GTCTC 1 cut(s) 1080
AlwI GGATC 2 cut(s) 137, 950
AlwNI CAGNNNCTG 1 cut(s) 767
Ama87I CYCGRG 1 cut(s) 952
AoxI GGCC 8 cut(s) 181, 308, 370, 583, 611, 703, 908, 1040
ApeKI GCWGC 4 cut(s) 109, 533, 761, 995
AsiGI ACCGGT 1 cut(s) 274
Asp700I GAANNNNTTC 1 cut(s) 526
AspS9I GGNCC 5 cut(s) 272, 583, 704, 922, 1144
AsuHPI GGTGA 1 cut(s) 269
AvaI CYCGRG 1 cut(s) 952
AvaII GGWCC 3 cut(s) 272, 922, 1144
BanI GGYRCC 1 cut(s) 1126
BbrPI CACGTG 1 cut(s) 196
BbvCI CCTCAGC 1 cut(s) 413
BbvI GCAGC 4 cut(s) 121, 520, 773, 1007
BccI CCATC 2 cut(s) 353, 695
BceAI ACGGC 2 cut(s) 323, 864
BcgI CGANNNNNNTGC 2 cut(s) 660, 694
BciT130I CCWGG 1 cut(s) 312
BciVI GTATCC 2 cut(s) 41, 1172
BcoDI GTCTC 1 cut(s) 1080
BfaI CTAG 6 cut(s) 206, 587, 653, 743, 860, 987
BfmI CTRYAG 3 cut(s) 6, 107, 333
BfuI GTATCC 2 cut(s) 41, 1172
BglII AGATCT 1 cut(s) 15
BisI GCNGC 6 cut(s) 110, 265, 534, 576, 762, 996
BlpI GCTNAGC 1 cut(s) 327
BlsI GCNGC 6 cut(s) 111, 266, 535, 577, 763, 997
Bme1390I CCNGG 1 cut(s) 312
Bme18I GGWCC 3 cut(s) 272, 922, 1144
BmeT110I CYCGRG 1 cut(s) 952
BmgT120I GGNCC 5 cut(s) 272, 583, 704, 922, 1144
BmiI GGNNCC 3 cut(s) 878, 924, 1128
BmrFI CCNGG 1 cut(s) 312
BmrI ACTGGG 1 cut(s) 32
BmsI GCATC 2 cut(s) 52, 427
BmuI ACTGGG 1 cut(s) 32
BplI GAGNNNNNCTC 1 cut(s) 34
Bpu10I CCTNAGC 2 cut(s) 413, 579
Bpu1102I GCTNAGC 1 cut(s) 327
BpuEI CTTGAG 2 cut(s) 735, 1039
BsaAI YACGTR 3 cut(s) 196, 737, 775
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 1 cut(s) 542
BsaWI WCCGGW 2 cut(s) 274, 939
BsaXI ACNNNNNCTCC 2 cut(s) 953, 983
Bsc4I CCNNNNNNNGG 2 cut(s) 958, 981
Bse118I RCCGGY 1 cut(s) 274
Bse1I ACTGG 1 cut(s) 38
Bse3DI GCAATG 2 cut(s) 1156, 1171
Bse8I GATNNNNATC 1 cut(s) 300
BseBI CCWGG 1 cut(s) 312
BseDI CCNNGG 1 cut(s) 542
BseGI GGATG 5 cut(s) 136, 364, 418, 706, 1060
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 2 cut(s) 958, 981
BseMI GCAATG 2 cut(s) 1156, 1171
BseMII CTCAG 2 cut(s) 341, 404
BseNI ACTGG 1 cut(s) 38
BseRI GAGGAG 1 cut(s) 473
BseXI GCAGC 4 cut(s) 121, 520, 773, 1007
BseYI CCCAGC 1 cut(s) 146
BshFI GGCC 8 cut(s) 183, 310, 372, 585, 613, 705, 910, 1042
BshNI GGYRCC 1 cut(s) 1126
BshTI ACCGGT 1 cut(s) 274
BsiHKCI CYCGRG 1 cut(s) 952
BsiSI CCGG 4 cut(s) 180, 275, 874, 940
BslFI GGGAC 2 cut(s) 760, 978
BslI CCNNNNNNNGG 2 cut(s) 958, 981
BsmAI GTCTC 1 cut(s) 1080
BsmFI GGGAC 2 cut(s) 760, 978
BsnI GGCC 8 cut(s) 183, 310, 372, 585, 613, 705, 910, 1042
BsoBI CYCGRG 1 cut(s) 952
Bsp143I GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
Bsp1720I GCTNAGC 1 cut(s) 327
Bsp19I CCATGG 1 cut(s) 542
BspACI CCGC 7 cut(s) 65, 209, 264, 575, 871, 1147, 1176
BspANI GGCC 8 cut(s) 183, 310, 372, 585, 613, 705, 910, 1042
BspCNI CTCAG 2 cut(s) 340, 405
BspLI GGNNCC 3 cut(s) 878, 924, 1128
BspMAI CTGCAG 2 cut(s) 10, 111
BspPI GGATC 2 cut(s) 137, 950
BspQI GCTCTTC 1 cut(s) 543
BspT107I GGYRCC 1 cut(s) 1126
BsrDI GCAATG 2 cut(s) 1156, 1171
BsrFI RCCGGY 1 cut(s) 274
BsrI ACTGG 1 cut(s) 38
BssAI RCCGGY 1 cut(s) 274
BssECI CCNNGG 1 cut(s) 542
BssMI GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
BssNAI GTATAC 2 cut(s) 478, 740
BssT1I CCWWGG 1 cut(s) 542
Bst1107I GTATAC 2 cut(s) 478, 740
Bst2UI CCWGG 1 cut(s) 312
Bst4CI ACNGT 1 cut(s) 969
Bst6I CTCTTC 4 cut(s) 450, 521, 543, 1083
BstBAI YACGTR 3 cut(s) 196, 737, 775
BstC8I GCNNGC 1 cut(s) 387
BstDEI CTNAG 5 cut(s) 305, 327, 413, 502, 579
BstDSI CCRYGG 1 cut(s) 542
BstF5I GGATG 5 cut(s) 136, 364, 418, 706, 1060
BstKTI GATC 8 cut(s) 18, 145, 163, 441, 511, 607, 945, 1068
BstMAI GTCTC 1 cut(s) 1080
BstMBI GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
BstMWI GCNNNNNNNGC 6 cut(s) 115, 147, 369, 572, 992, 1004
BstNI CCWGG 1 cut(s) 312
BstSCI CCNGG 1 cut(s) 310
BstSFI CTRYAG 3 cut(s) 6, 107, 333
BstSNI TACGTA 1 cut(s) 775
BstV1I GCAGC 4 cut(s) 121, 520, 773, 1007
BstX2I RGATCY 1 cut(s) 15
BstYI RGATCY 1 cut(s) 15
BstZ17I GTATAC 2 cut(s) 478, 740
BsuI GTATCC 2 cut(s) 41, 1172
BsuRI GGCC 8 cut(s) 183, 310, 372, 585, 613, 705, 910, 1042
BtgI CCRYGG 1 cut(s) 542
BtgZI GCGATG 1 cut(s) 819
BtsCI GGATG 5 cut(s) 136, 364, 418, 706, 1060
Cac8I GCNNGC 1 cut(s) 387
CaiI CAGNNNCTG 1 cut(s) 767
Cfr10I RCCGGY 1 cut(s) 274
Cfr13I GGNCC 5 cut(s) 272, 583, 704, 922, 1144
Csp6I GTAC 1 cut(s) 1168
CspAI ACCGGT 1 cut(s) 274
CviAII CATG 6 cut(s) 21, 124, 240, 543, 599, 725
CviQI GTAC 1 cut(s) 1168
DdeI CTNAG 5 cut(s) 305, 327, 413, 502, 579
DpnI GATC 8 cut(s) 17, 144, 162, 440, 510, 606, 944, 1067
DpnII GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
DraI TTTAAA 1 cut(s) 634
Eam1104I CTCTTC 4 cut(s) 450, 521, 543, 1083
EarI CTCTTC 4 cut(s) 450, 521, 543, 1083
Eco105I TACGTA 1 cut(s) 775
Eco130I CCWWGG 1 cut(s) 542
Eco147I AGGCCT 4 cut(s) 310, 613, 910, 1042
Eco47I GGWCC 3 cut(s) 272, 922, 1144
Eco57I CTGAAG 2 cut(s) 502, 1064
Eco72I CACGTG 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 952
EcoO109I RGGNCCY 2 cut(s) 583, 922
EcoRII CCWGG 1 cut(s) 310
EcoT14I CCWWGG 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 542
FaeI CATG 6 cut(s) 24, 127, 243, 546, 602, 728
FaqI GGGAC 2 cut(s) 760, 978
FatI CATG 6 cut(s) 20, 123, 239, 542, 598, 724
FauI CCCGC 1 cut(s) 878
FblI GTMKAC 2 cut(s) 477, 739
Fnu4HI GCNGC 6 cut(s) 110, 265, 534, 576, 762, 996
FokI GGATG 5 cut(s) 143, 371, 405, 713, 1067
Fsp4HI GCNGC 6 cut(s) 110, 265, 534, 576, 762, 996
FspBI CTAG 6 cut(s) 206, 587, 653, 743, 860, 987
GluI GCNGC 6 cut(s) 110, 265, 534, 576, 762, 996
GsaI CCCAGC 1 cut(s) 150
HaeIII GGCC 8 cut(s) 183, 310, 372, 585, 613, 705, 910, 1042
HapII CCGG 4 cut(s) 180, 275, 874, 940
Hin1II CATG 6 cut(s) 24, 127, 243, 546, 602, 728
HincII GTYRAC 3 cut(s) 549, 843, 1101
HindII GTYRAC 3 cut(s) 549, 843, 1101
HindIII AAGCTT 2 cut(s) 499, 932
HinfI GANTC 4 cut(s) 68, 656, 748, 1073
HpaI GTTAAC 1 cut(s) 1101
HpaII CCGG 4 cut(s) 180, 275, 874, 940
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 7 cut(s) 280, 478, 549, 740, 843, 884, 1101
Hpy188I TCNGA 5 cut(s) 130, 443, 521, 661, 682
Hpy188III TCNNGA 2 cut(s) 86, 1201
Hpy8I GTNNAC 7 cut(s) 280, 478, 549, 740, 843, 884, 1101
Hpy99I CGWCG 1 cut(s) 1207
HpyAV CCTTC 6 cut(s) 200, 254, 316, 601, 704, 913
HpyCH4III ACNGT 1 cut(s) 969
HpyCH4IV ACGT 3 cut(s) 195, 736, 774
HpyCH4V TGCA 5 cut(s) 8, 109, 155, 598, 761
HpyF10VI GCNNNNNNNGC 6 cut(s) 115, 147, 369, 572, 992, 1004
HpyF3I CTNAG 5 cut(s) 305, 327, 413, 502, 579
HpySE526I ACGT 3 cut(s) 195, 736, 774
Hsp92II CATG 6 cut(s) 24, 127, 243, 546, 602, 728
KspAI GTTAAC 1 cut(s) 1101
Kzo9I GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
LguI GCTCTTC 1 cut(s) 543
LmnI GCTCC 3 cut(s) 211, 460, 876
Lsp1109I GCAGC 4 cut(s) 121, 520, 773, 1007
LweI GCATC 2 cut(s) 52, 427
MaeI CTAG 6 cut(s) 206, 587, 653, 743, 860, 987
MaeII ACGT 3 cut(s) 195, 736, 774
MaeIII GTNAC 2 cut(s) 730, 785
MalI GATC 8 cut(s) 17, 144, 162, 440, 510, 606, 944, 1067
MboI GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
MflI RGATCY 1 cut(s) 15
MluCI AATT 4 cut(s) 135, 247, 317, 1208
MlyI GAGTC 3 cut(s) 650, 742, 1082
MmeI TCCRAC 1 cut(s) 108
MnlI CCTC 7 cut(s) 44, 408, 451, 488, 921, 955, 1032
MroXI GAANNNNTTC 1 cut(s) 526
MseI TTAA 6 cut(s) 216, 432, 633, 791, 936, 1100
MslI CAYNNNNRTG 1 cut(s) 25
MspA1I CMGCKG 1 cut(s) 412
MspI CCGG 4 cut(s) 180, 275, 874, 940
MspR9I CCNGG 1 cut(s) 312
MvaI CCWGG 1 cut(s) 312
MwoI GCNNNNNNNGC 6 cut(s) 115, 147, 369, 572, 992, 1004
NcoI CCATGG 1 cut(s) 542
NdeII GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
NlaIII CATG 6 cut(s) 24, 127, 243, 546, 602, 728
NlaIV GGNNCC 3 cut(s) 878, 924, 1128
NmuCI GTSAC 1 cut(s) 785
PceI AGGCCT 4 cut(s) 310, 613, 910, 1042
PciSI GCTCTTC 1 cut(s) 543
PdmI GAANNNNTTC 1 cut(s) 526
PfeI GAWTC 1 cut(s) 68
PinAI ACCGGT 1 cut(s) 274
PkrI GCNGC 6 cut(s) 111, 266, 535, 577, 763, 997
PleI GAGTC 3 cut(s) 650, 742, 1081
PmaCI CACGTG 1 cut(s) 196
PmlI CACGTG 1 cut(s) 196
PpsI GAGTC 3 cut(s) 650, 742, 1081
Ppu21I YACGTR 3 cut(s) 196, 737, 775
PpuMI RGGWCCY 1 cut(s) 922
Psp5II RGGWCCY 1 cut(s) 922
Psp6I CCWGG 1 cut(s) 310
PspCI CACGTG 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 146
PspGI CCWGG 1 cut(s) 310
PspN4I GGNNCC 3 cut(s) 878, 924, 1128
PspPI GGNCC 5 cut(s) 272, 583, 704, 922, 1144
PspPPI RGGWCCY 1 cut(s) 922
PstI CTGCAG 2 cut(s) 10, 111
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 1 cut(s) 15
PvuII CAGCTG 1 cut(s) 412
RsaI GTAC 1 cut(s) 1169
RsaNI GTAC 1 cut(s) 1168
RseI CAYNNNNRTG 1 cut(s) 25
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 6 cut(s) 216, 432, 633, 791, 936, 1100
SatI GCNGC 6 cut(s) 110, 265, 534, 576, 762, 996
Sau3AI GATC 8 cut(s) 15, 142, 160, 438, 508, 604, 942, 1065
Sau96I GGNCC 5 cut(s) 272, 583, 704, 922, 1144
SchI GAGTC 3 cut(s) 650, 742, 1082
ScrFI CCNGG 1 cut(s) 312
SfaNI GCATC 2 cut(s) 52, 427
SfcI CTRYAG 3 cut(s) 6, 107, 333
SinI GGWCC 3 cut(s) 272, 922, 1144
SmiMI CAYNNNNRTG 1 cut(s) 25
SmlI CTYRAG 2 cut(s) 750, 1018
SmoI CTYRAG 2 cut(s) 750, 1018
SnaBI TACGTA 1 cut(s) 775
Sse9I AATT 4 cut(s) 135, 247, 317, 1208
SseBI AGGCCT 4 cut(s) 310, 613, 910, 1042
SsiI CCGC 7 cut(s) 65, 209, 264, 575, 871, 1147, 1176
SspI AATATT 1 cut(s) 427
SspMI CTAG 6 cut(s) 206, 587, 653, 743, 860, 987
StuI AGGCCT 4 cut(s) 310, 613, 910, 1042
StyD4I CCNGG 1 cut(s) 310
StyI CCWWGG 1 cut(s) 542
TaaI ACNGT 1 cut(s) 969
TaiI ACGT 3 cut(s) 198, 739, 777
TaqI TCGA 1 cut(s) 1037
TasI AATT 4 cut(s) 135, 247, 317, 1208
TauI GCSGC 2 cut(s) 267, 578
TfiI GAWTC 1 cut(s) 68
Tru1I TTAA 6 cut(s) 216, 432, 633, 791, 936, 1100
Tru9I TTAA 6 cut(s) 216, 432, 633, 791, 936, 1100
TseFI GTSAC 1 cut(s) 785
TseI GCWGC 4 cut(s) 109, 533, 761, 995
Tsp45I GTSAC 1 cut(s) 785
TspDTI ATGAA 5 cut(s) 228, 572, 615, 1149, 1167
TspGWI ACGGA 1 cut(s) 1067
VpaK11BI GGWCC 3 cut(s) 272, 922, 1144
XmiI GTMKAC 2 cut(s) 477, 739
XmnI GAANNNNTTC 1 cut(s) 526
XspI CTAG 6 cut(s) 206, 587, 653, 743, 860, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.