MD15G1048500.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
3307912 .. 3309857
1946 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1048500.v1.1.491

Sequence Viewer

Length: 1206 bp
ATGACTGAAAAGAAAATCCTCACATGGAAATGCATCATCCCAGGCTGTTACAAGAGCACTACAGATCCAGAGAGCCGCCTGCAGCAGCCAGTTCTTAAGCAAACCCCATCACTGCAGCAGAGACTCTCCATCTCGGATATAAGCAATGATCTGAGCTCGGCTCTCTTTGCAGACGATCTCTCCAACCCCCTCATCAGCCTCAACCTTCACGTGTTTTCGCTCGCGGAGCTTGGAGTTGTCACAAGAAATTTTTCATGGAGTAGTCTGATCGGGGAAGGTGGGTTTGGACCCGTGTTCAAAGGGTTTGTTGGTGACAAGGTTAGGCCTGGATTGAAGGCTCAGCCTGTGGCTGTCAAGCTGTTGGACTTGGATGGTTTGCAAGGCCACAAAGAATGGCTGGCAGAAATTGTATTTCTTGGGCAGCTGAGGCATCAAAATCTTGTGAAGCTGATTGGATATTGTTGTGAAGACGAGCACAGGCTCCTAGTTTATGAATACATGGCAGGGGGAAGCTTAGAAAATCAACTCTTCAGAAGTTATTCTACTCCTCTGTCGTGGTCGAAAAGAATGAAAATCGCCGTTGGGGCAGCGAAGGGCTTAGCGTTCCTCCATGAAGCAGATCACAAGCCTGTCATATTCCGAGATTTTAAGACTTCGAATATTCTGCTGGACTCTGATTATACAGCTAAACTTTCGGATTTCGGGTTAGCAAAGGACGGTCCAGAAGGAGAGGACACACATATAACTACACGTATAATAGGGACACAGGGGTATGCAGCCCCTGAATACATCATGACAGGTTGCTTGACTACCAAGAGTGACGTCTATAGTTTTGGAGTTGTTCTGCTAGAGCTATTGACAGGTAAACGGTGCATAGATAATACCTGCCCCAGTCGTGAACAGAAACTTGTGGAGTGGGCAAAACCTCGCTTGAAGGATACGAGAAAGCTCGACGGGATTATAGACCCAATGATGGAGGGACAGTATTCGATCCGAGGGGCTCGAAAGGCGGCTGCATTGGCTTACAGTTGCTTGAGCCACAATCCAAAGCAAAGGCCTAGGATGAGTGATGTGGTTGTGATCTTAGAAGGTCTTCAAGACTTCGATGAAGGGTTAGTTGTCAGGCCATTTGTTTATGTAGCACCAAATGAGGAGGATAGTAATAGTAGCATCAAAAGTATGATAACAAGTGAGGCAAAAAATTAG

Protein Analysis

402

Amino Acids

44.54

Weight (kDa)

6.72

Isoelectric Point (pI)

33.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 87 - 359 1.1e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 87 - 358 1.2e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 825
Acc36I ACCTGC 1 cut(s) 893
AccII CGCG 1 cut(s) 224
AciI CCGC 3 cut(s) 76, 224, 1010
AclWI GGATC 2 cut(s) 59, 985
AcsI RAATTY 1 cut(s) 247
AcuI CTGAAG 1 cut(s) 514
AcvI CACGTG 1 cut(s) 211
AcyI GRCGYC 1 cut(s) 822
AfiI CCNNNNNNNGG 1 cut(s) 973
AflII CTTAAG 1 cut(s) 95
AflIII ACRYGT 2 cut(s) 210, 749
AgsI TTSAA 4 cut(s) 298, 334, 934, 1097
AjnI CCWGG 2 cut(s) 40, 325
AjuI GAANNNNNNNTTGG 2 cut(s) 267, 299
AluBI AGCT 9 cut(s) 156, 229, 358, 424, 448, 513, 686, 853, 949
AluI AGCT 9 cut(s) 156, 229, 358, 424, 448, 513, 686, 853, 949
Alw21I GWGCWC 3 cut(s) 59, 158, 477
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 2 cut(s) 59, 985
AlwNI CAGNNNCTG 1 cut(s) 782
AoxI GGCC 4 cut(s) 323, 382, 1055, 1124
ApeKI GCWGC 7 cut(s) 82, 85, 115, 421, 587, 776, 1013
ApoI RAATTY 1 cut(s) 247
Asp700I GAANNNNTTC 3 cut(s) 250, 538, 1092
AspA2I CCTAGG 1 cut(s) 1058
AspS9I GGNCC 2 cut(s) 287, 719
AsuHPI GGTGA 1 cut(s) 323
AsuII TTCGAA 1 cut(s) 656
AvaII GGWCC 2 cut(s) 287, 719
AvrII CCTAGG 1 cut(s) 1058
BanII GRGCYC 2 cut(s) 158, 1003
BarI GAAGNNNNNNTAC 2 cut(s) 526, 558
BbrPI CACGTG 1 cut(s) 211
BbsI GAAGAC 2 cut(s) 474, 1085
Bbv12I GWGCWC 3 cut(s) 59, 158, 477
BbvCI CCTCAGC 1 cut(s) 425
BbvI GCAGC 7 cut(s) 94, 97, 127, 433, 599, 788, 1000
BccI CCATC 4 cut(s) 115, 137, 365, 967
BceAI ACGGC 1 cut(s) 563
BcgI CGANNNNNNTGC 2 cut(s) 646, 680
BciT130I CCWGG 2 cut(s) 42, 327
BciVI GTATCC 1 cut(s) 931
BcoDI GTCTC 1 cut(s) 115
BfaI CTAG 3 cut(s) 485, 848, 1059
BfmI CTRYAG 4 cut(s) 60, 80, 113, 826
BfrI CTTAAG 1 cut(s) 95
BfuAI ACCTGC 1 cut(s) 893
BfuI GTATCC 1 cut(s) 931
BglI GCCNNNNNGGC 1 cut(s) 584
BisI GCNGC 9 cut(s) 76, 83, 86, 116, 422, 588, 777, 1011, 1014
BlnI CCTAGG 1 cut(s) 1058
BlpI GCTNAGC 2 cut(s) 339, 598
BlsI GCNGC 9 cut(s) 77, 84, 87, 117, 423, 589, 778, 1012, 1015
Bme1390I CCNGG 2 cut(s) 42, 327
Bme18I GGWCC 2 cut(s) 287, 719
BmgT120I GGNCC 2 cut(s) 287, 719
BmiI GGNNCC 2 cut(s) 289, 482
BmrFI CCNGG 2 cut(s) 42, 327
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 3 cut(s) 42, 439, 1179
BmuI ACTGGG 1 cut(s) 885
BpiI GAAGAC 2 cut(s) 474, 1085
BplI GAGNNNNNCTC 2 cut(s) 145, 177
Bpu10I CCTNAGC 1 cut(s) 425
Bpu1102I GCTNAGC 2 cut(s) 339, 598
Bpu14I TTCGAA 1 cut(s) 656
BpuEI CTTGAG 1 cut(s) 1054
BsaAI YACGTR 2 cut(s) 211, 752
BsaHI GRCGYC 1 cut(s) 822
BsaJI CCNNGG 3 cut(s) 40, 994, 1058
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 968, 998
Bsc4I CCNNNNNNNGG 1 cut(s) 973
Bse1I ACTGG 2 cut(s) 89, 891
Bse3DI GCAATG 1 cut(s) 151
BseBI CCWGG 2 cut(s) 42, 327
BseDI CCNNGG 3 cut(s) 40, 994, 1058
BseGI GGATG 3 cut(s) 36, 376, 1068
BseLI CCNNNNNNNGG 1 cut(s) 973
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 3 cut(s) 143, 353, 416
BseNI ACTGG 2 cut(s) 89, 891
BseRI GAGGAG 2 cut(s) 537, 1166
BseXI GCAGC 7 cut(s) 94, 97, 127, 433, 599, 788, 1000
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 4 cut(s) 325, 384, 1057, 1126
BsiHKAI GWGCWC 3 cut(s) 59, 158, 477
BslFI GGGAC 2 cut(s) 775, 993
BslI CCNNNNNNNGG 1 cut(s) 973
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 2 cut(s) 775, 993
BsnI GGCC 4 cut(s) 325, 384, 1057, 1126
Bsp119I TTCGAA 1 cut(s) 656
Bsp1286I GDGCHC 4 cut(s) 59, 158, 477, 1003
Bsp143I GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
Bsp1720I GCTNAGC 2 cut(s) 339, 598
BspACI CCGC 3 cut(s) 76, 224, 1010
BspANI GGCC 4 cut(s) 325, 384, 1057, 1126
BspCNI CTCAG 3 cut(s) 144, 352, 417
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 1 cut(s) 792
BspLI GGNNCC 2 cut(s) 289, 482
BspMAI CTGCAG 2 cut(s) 84, 117
BspMI ACCTGC 1 cut(s) 893
BspPI GGATC 2 cut(s) 59, 985
BspT104I TTCGAA 1 cut(s) 656
BspTI CTTAAG 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 151
BsrI ACTGG 2 cut(s) 89, 891
BssECI CCNNGG 3 cut(s) 40, 994, 1058
BssMI GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
BssNI GRCGYC 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 1058
Bst2UI CCWGG 2 cut(s) 42, 327
Bst4CI ACNGT 4 cut(s) 719, 870, 984, 1028
Bst6I CTCTTC 1 cut(s) 533
BstACI GRCGYC 1 cut(s) 822
BstAFI CTTAAG 1 cut(s) 95
BstBAI YACGTR 2 cut(s) 211, 752
BstBI TTCGAA 1 cut(s) 656
BstC8I GCNNGC 3 cut(s) 80, 222, 399
BstDEI CTNAG 6 cut(s) 152, 339, 425, 514, 598, 1084
BstF5I GGATG 3 cut(s) 36, 376, 1068
BstFNI CGCG 1 cut(s) 224
BstKTI GATC 7 cut(s) 67, 151, 178, 270, 622, 993, 1083
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
BstMWI GCNNNNNNNGC 6 cut(s) 167, 226, 427, 584, 1007, 1019
BstNI CCWGG 2 cut(s) 42, 327
BstSCI CCNGG 2 cut(s) 40, 325
BstSFI CTRYAG 4 cut(s) 60, 80, 113, 826
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 7 cut(s) 94, 97, 127, 433, 599, 788, 1000
BstV2I GAAGAC 2 cut(s) 474, 1085
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
BsuI GTATCC 1 cut(s) 931
BsuRI GGCC 4 cut(s) 325, 384, 1057, 1126
BtsCI GGATG 3 cut(s) 36, 376, 1068
BtsI GCAGTG 1 cut(s) 110
BtsIMutI CAGTG 1 cut(s) 110
BveI ACCTGC 1 cut(s) 893
Cac8I GCNNGC 3 cut(s) 80, 222, 399
CaiI CAGNNNCTG 1 cut(s) 782
CciI TCATGA 1 cut(s) 792
Cfr13I GGNCC 2 cut(s) 287, 719
CviAII CATG 5 cut(s) 24, 255, 499, 611, 793
DdeI CTNAG 6 cut(s) 152, 339, 425, 514, 598, 1084
DpnI GATC 7 cut(s) 66, 150, 177, 269, 621, 992, 1082
DpnII GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
Eam1104I CTCTTC 1 cut(s) 533
EarI CTCTTC 1 cut(s) 533
Ecl136II GAGCTC 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 1058
Eco147I AGGCCT 2 cut(s) 325, 1057
Eco24I GRGCYC 2 cut(s) 158, 1003
Eco47I GGWCC 2 cut(s) 287, 719
Eco53kI GAGCTC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 514
Eco72I CACGTG 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 156
EcoRII CCWGG 2 cut(s) 40, 325
EcoT14I CCWWGG 1 cut(s) 1058
EcoT22I ATGCAT 1 cut(s) 35
EcoT38I GRGCYC 2 cut(s) 158, 1003
ErhI CCWWGG 1 cut(s) 1058
FaeI CATG 5 cut(s) 27, 258, 502, 614, 796
FaqI GGGAC 2 cut(s) 775, 993
FatI CATG 5 cut(s) 23, 254, 498, 610, 792
Fnu4HI GCNGC 9 cut(s) 76, 83, 86, 116, 422, 588, 777, 1011, 1014
FokI GGATG 3 cut(s) 23, 383, 1075
FriOI GRGCYC 2 cut(s) 158, 1003
Fsp4HI GCNGC 9 cut(s) 76, 83, 86, 116, 422, 588, 777, 1011, 1014
FspBI CTAG 3 cut(s) 485, 848, 1059
GluI GCNGC 9 cut(s) 76, 83, 86, 116, 422, 588, 777, 1011, 1014
HaeIII GGCC 4 cut(s) 325, 384, 1057, 1126
Hin1I GRCGYC 1 cut(s) 822
Hin1II CATG 5 cut(s) 27, 258, 502, 614, 796
HindIII AAGCTT 1 cut(s) 511
HinfI GANTC 2 cut(s) 123, 671
HphI GGTGA 1 cut(s) 323
Hpy166II GTNNAC 2 cut(s) 866, 899
Hpy188I TCNGA 8 cut(s) 136, 153, 267, 533, 641, 676, 697, 995
Hpy188III TCNNGA 5 cut(s) 68, 722, 793, 896, 1097
Hpy8I GTNNAC 2 cut(s) 866, 899
Hpy99I CGWCG 1 cut(s) 956
HpyAV CCTTC 8 cut(s) 215, 269, 328, 586, 719, 928, 1082, 1103
HpyCH4III ACNGT 4 cut(s) 719, 870, 984, 1028
HpyCH4IV ACGT 3 cut(s) 210, 751, 822
HpyCH4V TGCA 8 cut(s) 33, 82, 115, 170, 379, 776, 873, 1016
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 226, 427, 584, 1007, 1019
HpyF3I CTNAG 6 cut(s) 152, 339, 425, 514, 598, 1084
HpySE526I ACGT 3 cut(s) 210, 751, 822
Hsp92I GRCGYC 1 cut(s) 822
Hsp92II CATG 5 cut(s) 27, 258, 502, 614, 796
Kzo9I GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
LmnI GCTCC 2 cut(s) 226, 486
Lsp1109I GCAGC 7 cut(s) 94, 97, 127, 433, 599, 788, 1000
LweI GCATC 3 cut(s) 42, 439, 1179
MaeI CTAG 3 cut(s) 485, 848, 1059
MaeII ACGT 3 cut(s) 210, 751, 822
MaeIII GTNAC 4 cut(s) 47, 238, 311, 818
MalI GATC 7 cut(s) 66, 150, 177, 269, 621, 992, 1082
MboI GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
MboII GAAGA 3 cut(s) 479, 520, 1085
MflI RGATCY 1 cut(s) 64
MhlI GDGCHC 4 cut(s) 59, 158, 477, 1003
MluCI AATT 3 cut(s) 247, 405, 1201
MlyI GAGTC 2 cut(s) 117, 665
MmeI TCCRAC 2 cut(s) 207, 342
Mph1103I ATGCAT 1 cut(s) 35
MroXI GAANNNNTTC 3 cut(s) 250, 538, 1092
MseI TTAA 2 cut(s) 96, 648
MslI CAYNNNNRTG 1 cut(s) 28
MspA1I CMGCKG 1 cut(s) 424
MspCI CTTAAG 1 cut(s) 95
MspR9I CCNGG 2 cut(s) 42, 327
MvaI CCWGG 2 cut(s) 42, 327
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 6 cut(s) 167, 226, 427, 584, 1007, 1019
NdeII GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
NlaIII CATG 5 cut(s) 27, 258, 502, 614, 796
NlaIV GGNNCC 2 cut(s) 289, 482
NmeAIII GCCGAG 1 cut(s) 137
NmuCI GTSAC 3 cut(s) 238, 311, 818
NsiI ATGCAT 1 cut(s) 35
NspV TTCGAA 1 cut(s) 656
PagI TCATGA 1 cut(s) 792
PceI AGGCCT 2 cut(s) 325, 1057
PdmI GAANNNNTTC 3 cut(s) 250, 538, 1092
PkrI GCNGC 9 cut(s) 77, 84, 87, 117, 423, 589, 778, 1012, 1015
PleI GAGTC 2 cut(s) 117, 665
PmaCI CACGTG 1 cut(s) 211
PmlI CACGTG 1 cut(s) 211
PpsI GAGTC 2 cut(s) 117, 665
Ppu21I YACGTR 2 cut(s) 211, 752
Psp124BI GAGCTC 1 cut(s) 158
Psp6I CCWGG 2 cut(s) 40, 325
PspCI CACGTG 1 cut(s) 211
PspGI CCWGG 2 cut(s) 40, 325
PspN4I GGNNCC 2 cut(s) 289, 482
PspPI GGNCC 2 cut(s) 287, 719
PstI CTGCAG 2 cut(s) 84, 117
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 64
PvuII CAGCTG 1 cut(s) 424
RseI CAYNNNNRTG 1 cut(s) 28
SacI GAGCTC 1 cut(s) 158
SaqAI TTAA 2 cut(s) 96, 648
SatI GCNGC 9 cut(s) 76, 83, 86, 116, 422, 588, 777, 1011, 1014
Sau3AI GATC 7 cut(s) 64, 148, 175, 267, 619, 990, 1080
Sau96I GGNCC 2 cut(s) 287, 719
SchI GAGTC 2 cut(s) 117, 665
ScrFI CCNGG 2 cut(s) 42, 327
SduI GDGCHC 4 cut(s) 59, 158, 477, 1003
SfaNI GCATC 3 cut(s) 42, 439, 1179
SfcI CTRYAG 4 cut(s) 60, 80, 113, 826
SfuI TTCGAA 1 cut(s) 656
SinI GGWCC 2 cut(s) 287, 719
SmiMI CAYNNNNRTG 1 cut(s) 28
SmlI CTYRAG 2 cut(s) 95, 1033
SmoI CTYRAG 2 cut(s) 95, 1033
Sse9I AATT 3 cut(s) 247, 405, 1201
SseBI AGGCCT 2 cut(s) 325, 1057
SsiI CCGC 3 cut(s) 76, 224, 1010
SspI AATATT 1 cut(s) 661
SspMI CTAG 3 cut(s) 485, 848, 1059
SstI GAGCTC 1 cut(s) 158
StuI AGGCCT 2 cut(s) 325, 1057
StyD4I CCNGG 2 cut(s) 40, 325
StyI CCWWGG 1 cut(s) 1058
TaaI ACNGT 4 cut(s) 719, 870, 984, 1028
TaiI ACGT 3 cut(s) 213, 754, 825
TaqI TCGA 6 cut(s) 560, 656, 951, 989, 1003, 1104
TasI AATT 3 cut(s) 247, 405, 1201
TauI GCSGC 2 cut(s) 78, 1013
Tru1I TTAA 2 cut(s) 96, 648
Tru9I TTAA 2 cut(s) 96, 648
TscAI CASTG 1 cut(s) 117
TseFI GTSAC 3 cut(s) 238, 311, 818
TseI GCWGC 7 cut(s) 82, 85, 115, 421, 587, 776, 1013
Tsp45I GTSAC 3 cut(s) 238, 311, 818
TspDTI ATGAA 5 cut(s) 243, 507, 584, 627, 1122
TspRI CASTG 1 cut(s) 117
Vha464I CTTAAG 1 cut(s) 95
VpaK11BI GGWCC 2 cut(s) 287, 719
XapI RAATTY 1 cut(s) 247
XmaJI CCTAGG 1 cut(s) 1058
XmnI GAANNNNTTC 3 cut(s) 250, 538, 1092
XspI CTAG 3 cut(s) 485, 848, 1059
ZraI GACGTC 1 cut(s) 823
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.