Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010717

Physical Location & Seq

Genomic Coordinates Reverse (-)

35497441 .. 35499419

Gene Structure 1979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G402700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGCTCATGAGAAGATCACATGGAAATGCATCATCCCAGGCTGTTACAAAAGTGCTGCACGTTTAGAAAAACGGTTGCACACAGATTGCAAAAGAACAGAAATTCTGAAACAAAAACCTTTGCTGCAGAAGAGGCTTTCCCTCTCGGATATAAATGATGATCCCAGCTCAACGCTCTTTGCAGATGATCTTTCCAACTCTGTAATCGGCCTTAATCTTCATGTTTTTTCGTTAGCGGAGCTTAGAGTTGTCACAAGTAATTTCTCATGGAGTAATCTGCTTGGTGAGGGCGGGTTTGGACCGGTGTTCAAGGGGTTCGTTGATGACAAGCTTAGGCCTGGATTGAAGCCTCAGCCTGTAGCTGTCAAGCTGTTAGACTTGGATGGCTTGCAGGGCCATAGGGAGTGGCTGGCAGAGCTTATATTTCTTGGACAGCTGAGGCATCCTAATCTTGTTAAGCTGATTGGATATTGTTGTGAAGATGAGCACAGGCTTCTTGTATATGAATTCATGGCAAGAGGAAGCTTAGAAAACCAACTTTTCAGAAGCTATTCTTCTGCTCTGCCGTGGTCGAAAAGAATGAAAATCGCTGTTGGAGCGGCTAAGGGCCTAGCCTTTCTCCATGAAGCCGATCATAAGCCTGTCATATTCAGAGATTTTAAGACTTCAAATATTCTGCTGGACTCTGATTATACAGCTAAACTTTCAGATTTTGGGTTAGCAAAGGATGGTCCAGAAGGAGAAGACACACACATAACCACACGTATAATAGGAACACAGGGGTATGCAGCCCCAGAATACATCATGACAGGTCGATTGACAACCAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTGTTAGAGCTGCTGACAGGTAAATGGTGCATAGATAAAACCCGCCCAAATCGAGAACAGAACCTTGTAGAATGGGCAAAGCCTCGCTTGAAGGACCCCAGAAAGCTCGACCGGATTATAGACCCAACAATGGAGGGACAATACTCCACAAGAGGGGCTCGAAAGGCGGCTGCATTGGCTTACGCATGCCTGAGCCACCAGCCAAAGAATAGGCCAATGATGAGAGATGTGGTCATGATCTTGGAGCCTCTTCAGAACTTCAATGAAGGGTTAATTGTTAGGCCATTTGTTTATGTAGCACCAAATGAGGAGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

391

Amino Acids

44.1

Weight (kDa)

8.68

Isoelectric Point (pI)

27.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010717)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26290
fragaria_vesca	FvH4_2g30840 FvH4_2g30840
malus_domestica	MD08G1073100.v1.1 MD15G1048500.v1.1
prunus_persica	Prupe.1G402700_v2.0.a1
pyrus_communis	pycom15g04730
rosa_chinensis	RchiOBHm_Chr6g0312011
rosa_laevigata	RLG00000010361
rosa_roxburghii	Rroxscaffold_7G00157140
rosa_rugosa	Rorug06G0392000 Rorug06G0392000 Rorug06G0392100 Rorug06G0392100 Rorug06G0392200
rosa_samantha	Rh6AG508600 Rh6BG519900 Rh6CG525800 Rh6DG511300
rosa_wichuraiana	Rw6G044290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	599
AciI	CCGC	5 cut(s)	236, 291, 599, 898, 1022
AclWI	GGATC	1 cut(s)	155
AcsI	RAATTY	2 cut(s)	102, 506
AcuI	CTGAAG	1 cut(s)	1091
AfiI	CCNNNNNNNGG	2 cut(s)	985, 1008
AflIII	ACRYGT	1 cut(s)	761
AgeI	ACCGGT	1 cut(s)	301
AgsI	TTSAA	5 cut(s)	310, 346, 669, 946, 1117
AjnI	CCWGG	2 cut(s)	37, 337
Alw21I	GWGCWC	1 cut(s)	489
AlwI	GGATC	1 cut(s)	155
AoxI	GGCC	6 cut(s)	208, 335, 394, 607, 1067, 1136
ApeKI	GCWGC	5 cut(s)	56, 124, 788, 865, 1025
ApoI	RAATTY	2 cut(s)	102, 506
AsiGI	ACCGGT	1 cut(s)	301
Asp700I	GAANNNNTTC	1 cut(s)	550
AspS9I	GGNCC	5 cut(s)	299, 394, 607, 731, 949
AsuHPI	GGTGA	1 cut(s)	296
AvaII	GGWCC	3 cut(s)	299, 731, 949
BanII	GRGCYC	1 cut(s)	1015
BbsI	GAAGAC	1 cut(s)	750
Bbv12I	GWGCWC	1 cut(s)	489
BbvCI	CCTCAGC	2 cut(s)	351, 437
BbvI	GCAGC	5 cut(s)	43, 111, 800, 852, 1012
BccI	CCATC	2 cut(s)	377, 722
BceAI	ACGGC	1 cut(s)	550
BciT130I	CCWGG	2 cut(s)	39, 339
BfaI	CTAG	1 cut(s)	611
BfmI	CTRYAG	2 cut(s)	125, 357
BisI	GCNGC	7 cut(s)	57, 125, 600, 789, 866, 1023, 1026
BlsI	GCNGC	7 cut(s)	58, 126, 601, 790, 867, 1024, 1027
Bme1390I	CCNGG	2 cut(s)	39, 339
Bme18I	GGWCC	3 cut(s)	299, 731, 949
BmgT120I	GGNCC	5 cut(s)	299, 394, 607, 731, 949
BmiI	GGNNCC	2 cut(s)	951, 1101
BmrFI	CCNGG	2 cut(s)	39, 339
BmsI	GCATC	2 cut(s)	39, 451
BpiI	GAAGAC	1 cut(s)	750
Bpu10I	CCTNAGC	5 cut(s)	332, 351, 437, 603, 1046
BsaAI	YACGTR	1 cut(s)	764
BsaJI	CCNNGG	2 cut(s)	37, 566
BsaWI	WCCGGW	2 cut(s)	301, 966
Bsc4I	CCNNNNNNNGG	2 cut(s)	985, 1008
Bse118I	RCCGGY	1 cut(s)	301
BseBI	CCWGG	2 cut(s)	39, 339
BseDI	CCNNGG	2 cut(s)	37, 566
BseGI	GGATG	4 cut(s)	33, 388, 442, 733
BseLI	CCNNNNNNNGG	2 cut(s)	985, 1008
BseMII	CTCAG	3 cut(s)	365, 428, 1037
BseXI	GCAGC	5 cut(s)	43, 111, 800, 852, 1012
BseYI	CCCAGC	1 cut(s)	164
BsgI	GTGCAG	1 cut(s)	42
Bsh1285I	CGRYCG	1 cut(s)	967
BshFI	GGCC	6 cut(s)	210, 337, 396, 609, 1069, 1138
BshTI	ACCGGT	1 cut(s)	301
BsiEI	CGRYCG	1 cut(s)	967
BsiHKAI	GWGCWC	1 cut(s)	489
BsiSI	CCGG	2 cut(s)	302, 967
BslFI	GGGAC	1 cut(s)	1005
BslI	CCNNNNNNNGG	2 cut(s)	985, 1008
BsmFI	GGGAC	1 cut(s)	1005
BsnI	GGCC	6 cut(s)	210, 337, 396, 609, 1069, 1138
Bsp1286I	GDGCHC	2 cut(s)	489, 1015
Bsp143I	GATC	5 cut(s)	15, 160, 187, 631, 1092
BspACI	CCGC	5 cut(s)	236, 291, 599, 898, 1022
BspANI	GGCC	6 cut(s)	210, 337, 396, 609, 1069, 1138
BspCNI	CTCAG	3 cut(s)	364, 429, 1038
BspHI	TCATGA	3 cut(s)	7, 804, 1089
BspLI	GGNNCC	2 cut(s)	951, 1101
BspMAI	CTGCAG	1 cut(s)	129
BspPI	GGATC	1 cut(s)	155
BsrBI	CCGCTC	1 cut(s)	599
BsrFI	RCCGGY	1 cut(s)	301
BssAI	RCCGGY	1 cut(s)	301
BssECI	CCNNGG	2 cut(s)	37, 566
BssMI	GATC	5 cut(s)	15, 160, 187, 631, 1092
Bst2UI	CCWGG	2 cut(s)	39, 339
Bst4CI	ACNGT	1 cut(s)	75
Bst6I	CTCTTC	2 cut(s)	125, 1110
BstBAI	YACGTR	1 cut(s)	764
BstC8I	GCNNGC	3 cut(s)	389, 411, 1042
BstDEI	CTNAG	7 cut(s)	242, 332, 351, 437, 526, 603, 1046
BstDSI	CCRYGG	1 cut(s)	566
BstF5I	GGATG	4 cut(s)	33, 388, 442, 733
BstKTI	GATC	5 cut(s)	18, 163, 190, 634, 1095
BstMBI	GATC	5 cut(s)	15, 160, 187, 631, 1092
BstMCI	CGRYCG	1 cut(s)	967
BstMWI	GCNNNNNNNGC	6 cut(s)	133, 393, 415, 596, 1019, 1031
BstNI	CCWGG	2 cut(s)	39, 339
BstNSI	RCATGY	1 cut(s)	1044
BstSCI	CCNGG	2 cut(s)	37, 337
BstSFI	CTRYAG	2 cut(s)	125, 357
BstV1I	GCAGC	5 cut(s)	43, 111, 800, 852, 1012
BstV2I	GAAGAC	1 cut(s)	750
BsuRI	GGCC	6 cut(s)	210, 337, 396, 609, 1069, 1138
BtgI	CCRYGG	1 cut(s)	566
BtsCI	GGATG	4 cut(s)	33, 388, 442, 733
Cac8I	GCNNGC	3 cut(s)	389, 411, 1042
CciI	TCATGA	3 cut(s)	7, 804, 1089
Cfr10I	RCCGGY	1 cut(s)	301
Cfr13I	GGNCC	5 cut(s)	299, 394, 607, 731, 949
CspAI	ACCGGT	1 cut(s)	301
CviAII	CATG	9 cut(s)	8, 21, 221, 267, 511, 623, 805, 1041, 1090
DdeI	CTNAG	7 cut(s)	242, 332, 351, 437, 526, 603, 1046
DpnI	GATC	5 cut(s)	17, 162, 189, 633, 1094
DpnII	GATC	5 cut(s)	15, 160, 187, 631, 1092
Eam1104I	CTCTTC	2 cut(s)	125, 1110
EarI	CTCTTC	2 cut(s)	125, 1110
Eco147I	AGGCCT	1 cut(s)	337
Eco24I	GRGCYC	1 cut(s)	1015
Eco47I	GGWCC	3 cut(s)	299, 731, 949
Eco57I	CTGAAG	1 cut(s)	1091
EcoO109I	RGGNCCY	2 cut(s)	607, 949
EcoRI	GAATTC	1 cut(s)	506
EcoRII	CCWGG	2 cut(s)	37, 337
EcoT22I	ATGCAT	1 cut(s)	32
EcoT38I	GRGCYC	1 cut(s)	1015
FaeI	CATG	9 cut(s)	11, 24, 224, 270, 514, 626, 808, 1044, 1093
FalI	AAGNNNNNCTT	4 cut(s)	538, 570, 926, 958
FaqI	GGGAC	1 cut(s)	1005
FatI	CATG	9 cut(s)	7, 20, 220, 266, 510, 622, 804, 1040, 1089
FauI	CCCGC	2 cut(s)	284, 905
Fnu4HI	GCNGC	7 cut(s)	57, 125, 600, 789, 866, 1023, 1026
FokI	GGATG	4 cut(s)	20, 395, 429, 740
FriOI	GRGCYC	1 cut(s)	1015
Fsp4HI	GCNGC	7 cut(s)	57, 125, 600, 789, 866, 1023, 1026
FspBI	CTAG	1 cut(s)	611
GluI	GCNGC	7 cut(s)	57, 125, 600, 789, 866, 1023, 1026
GsaI	CCCAGC	1 cut(s)	168
HaeIII	GGCC	6 cut(s)	210, 337, 396, 609, 1069, 1138
HapII	CCGG	2 cut(s)	302, 967
Hin1II	CATG	9 cut(s)	11, 24, 224, 270, 514, 626, 808, 1044, 1093
HindIII	AAGCTT	2 cut(s)	329, 523
HinfI	GANTC	1 cut(s)	683
HpaII	CCGG	2 cut(s)	302, 967
HphI	GGTGA	1 cut(s)	296
Hpy188I	TCNGA	7 cut(s)	108, 148, 545, 653, 688, 709, 1110
Hpy188III	TCNNGA	5 cut(s)	8, 734, 805, 908, 1090
HpyAV	CCTTC	3 cut(s)	731, 940, 1115
HpyCH4III	ACNGT	1 cut(s)	75
HpyCH4IV	ACGT	2 cut(s)	61, 763
HpyF10VI	GCNNNNNNNGC	6 cut(s)	133, 393, 415, 596, 1019, 1031
HpyF3I	CTNAG	7 cut(s)	242, 332, 351, 437, 526, 603, 1046
HpySE526I	ACGT	2 cut(s)	61, 763
Hsp92II	CATG	9 cut(s)	11, 24, 224, 270, 514, 626, 808, 1044, 1093
Kzo9I	GATC	5 cut(s)	15, 160, 187, 631, 1092
LmnI	GCTCC	3 cut(s)	238, 596, 1099
Lsp1109I	GCAGC	5 cut(s)	43, 111, 800, 852, 1012
LweI	GCATC	2 cut(s)	39, 451
MaeI	CTAG	1 cut(s)	611
MaeII	ACGT	2 cut(s)	61, 763
MaeIII	GTNAC	2 cut(s)	44, 250
MalI	GATC	5 cut(s)	17, 162, 189, 633, 1094
MbiI	CCGCTC	1 cut(s)	599
MboI	GATC	5 cut(s)	15, 160, 187, 631, 1092
MboII	GAAGA	7 cut(s)	25, 142, 209, 491, 546, 755, 1097
MhlI	GDGCHC	2 cut(s)	489, 1015
MluCI	AATT	4 cut(s)	102, 259, 506, 1128
MlyI	GAGTC	1 cut(s)	677
MmeI	TCCRAC	2 cut(s)	219, 574
Mph1103I	ATGCAT	1 cut(s)	32
MroXI	GAANNNNTTC	1 cut(s)	550
MseI	TTAA	4 cut(s)	213, 456, 660, 1127
MslI	CAYNNNNRTG	1 cut(s)	25
MspA1I	CMGCKG	1 cut(s)	436
MspI	CCGG	2 cut(s)	302, 967
MspR9I	CCNGG	2 cut(s)	39, 339
MvaI	CCWGG	2 cut(s)	39, 339
MwoI	GCNNNNNNNGC	6 cut(s)	133, 393, 415, 596, 1019, 1031
NdeII	GATC	5 cut(s)	15, 160, 187, 631, 1092
NlaIII	CATG	9 cut(s)	11, 24, 224, 270, 514, 626, 808, 1044, 1093
NlaIV	GGNNCC	2 cut(s)	951, 1101
NmuCI	GTSAC	1 cut(s)	250
NsiI	ATGCAT	1 cut(s)	32
NspI	RCATGY	1 cut(s)	1044
PaeI	GCATGC	1 cut(s)	1044
PagI	TCATGA	3 cut(s)	7, 804, 1089
PceI	AGGCCT	1 cut(s)	337
PdmI	GAANNNNTTC	1 cut(s)	550
PinAI	ACCGGT	1 cut(s)	301
PkrI	GCNGC	7 cut(s)	58, 126, 601, 790, 867, 1024, 1027
PleI	GAGTC	1 cut(s)	677
PpsI	GAGTC	1 cut(s)	677
Ppu21I	YACGTR	1 cut(s)	764
PpuMI	RGGWCCY	1 cut(s)	949
Psp5II	RGGWCCY	1 cut(s)	949
Psp6I	CCWGG	2 cut(s)	37, 337
PspFI	CCCAGC	1 cut(s)	164
PspGI	CCWGG	2 cut(s)	37, 337
PspN4I	GGNNCC	2 cut(s)	951, 1101
PspPI	GGNCC	5 cut(s)	299, 394, 607, 731, 949
PspPPI	RGGWCCY	1 cut(s)	949
PstI	CTGCAG	1 cut(s)	129
PvuII	CAGCTG	1 cut(s)	436
RseI	CAYNNNNRTG	1 cut(s)	25
SaqAI	TTAA	4 cut(s)	213, 456, 660, 1127
SatI	GCNGC	7 cut(s)	57, 125, 600, 789, 866, 1023, 1026
Sau3AI	GATC	5 cut(s)	15, 160, 187, 631, 1092
Sau96I	GGNCC	5 cut(s)	299, 394, 607, 731, 949
SchI	GAGTC	1 cut(s)	677
ScrFI	CCNGG	2 cut(s)	39, 339
SduI	GDGCHC	2 cut(s)	489, 1015
SfaNI	GCATC	2 cut(s)	39, 451
SfcI	CTRYAG	2 cut(s)	125, 357
SinI	GGWCC	3 cut(s)	299, 731, 949
SmiMI	CAYNNNNRTG	1 cut(s)	25
SphI	GCATGC	1 cut(s)	1044
Sse9I	AATT	4 cut(s)	102, 259, 506, 1128
SseBI	AGGCCT	1 cut(s)	337
SsiI	CCGC	5 cut(s)	236, 291, 599, 898, 1022
SspI	AATATT	1 cut(s)	673
SspMI	CTAG	1 cut(s)	611
StuI	AGGCCT	1 cut(s)	337
StyD4I	CCNGG	2 cut(s)	37, 337
TaaI	ACNGT	1 cut(s)	75
TaiI	ACGT	2 cut(s)	64, 766
TaqI	TCGA	5 cut(s)	572, 814, 907, 963, 1015
TasI	AATT	4 cut(s)	102, 259, 506, 1128
TauI	GCSGC	2 cut(s)	602, 1025
Tru1I	TTAA	4 cut(s)	213, 456, 660, 1127
Tru9I	TTAA	4 cut(s)	213, 456, 660, 1127
TseFI	GTSAC	1 cut(s)	250
TseI	GCWGC	5 cut(s)	56, 124, 788, 865, 1025
Tsp45I	GTSAC	1 cut(s)	250
TspDTI	ATGAA	6 cut(s)	209, 499, 519, 596, 639, 1134
VpaK11BI	GGWCC	3 cut(s)	299, 731, 949
XapI	RAATTY	2 cut(s)	102, 506
XceI	RCATGY	1 cut(s)	1044
XmnI	GAANNNNTTC	1 cut(s)	550
XspI	CTAG	1 cut(s)	611
Zsp2I	ATGCAT	1 cut(s)	32

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.